>input_sequence_61671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------ATGGCGACGGTTTCGGATTCTCTGGTCTGGG
AGCTTGTCAGGAAGAACAACTGCTTCCTGATCAAGCAGTTCGGCAACAGCAATGCCAAGGTCCAGTTCAGCAAGGAGCCC
AACAACCTCTACAATGTCCACTCCTACAAGTACTCTGGTCAGTGGTTATTGACCTCCCCTGATTGTTTGATTTTCGGATG
CTATGAGTGTCTCTTCGTCCACTGACAGATTGG-----------------TTTTCAGGCCTGGCAAACAAGAAGACTGTG
ACGGTGCAGCCAGCTGCTGAGAAGGAGATGACTGTGGTCCTCTCCACAACCAAGTCAAAGAAGCAGAACAAGCCTGCTGC
GTTCACCCACAAGACTGTCATGCGCAAGGAGTTCCGCAAGATGGCCAAGGCTGTCAAGAACCAGGTATTAGCATCAAAAC
AACCATATTTGTTCTTTTATGATTAAGTTGTGACA-CTGGATGTTCTAGATTAAGTACTCTAAATGACAACTGCTATTGG
AAATATAACCTGTAGCAACCATTCCAGTGTTTCGGTC-------------------------GCTTGACTGCTGAGTTTG
TACAGTCCCATCTCTAATCTTCTAAAGGGACTGTGTTATGAAATCCGCAGATGTAATGCTTTTAATCAACCTGGAACATT
ACTCTATAAACTTGCTCTAATATTTGAAGAATACATATTTACTTTCTATTTGTAACGCTGTATGGTTGTATCTAGTATGT
GACA-TTCACTTGTGACTGAGT-TGAGCCTTAATGTGGAAAAAGCTTTAATT--CAGTAAAAAATGGA------------
--ATGCCTGTCTTGTAAACCGCCCCTGCCTGTTTGTGCTTGGTTTTCAATGGTACTAGCTGGAAATGG------------
-----TCCTTTCTTTGGTGGTTACAA--AGT--GGAGAAATGCTGCTTAAGATGTCCTCCTGTTAAACCGTGTCGACCTC
ATTTGTTTTCTTGATCTAATGGTTAATTCTTCTTGCTTTCCAGGTCAGTGACAACTACTACAGGCCTGACTTGACCAAGC
CTGCTCTTGCAAGACTGAGCGCAGTTTACCGCAGCCTCCAGGTTGCCAAGTCCGGTGTCAAGAAGAAGAACAGGCAGTAA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------
>chr3B_1_TraesCS3B01G284300
ACTGACGGAGGGAGAGGGAGAGGAGAGGGCGGGCGATGCGGGCGGGGCGGCGAGGACGAGGGAGGGGGCGCGAGTGCGGG
CTGGGGAGCGGCTAGGTCATCCCCAAGCGGAGCGGCCTCCTTTTATACACCTGTAGGCGAAATGACGAAAATGCCCTCGA
CGGGGCAACGAATTTACACGCGGTGGCAGGAACGAGAGGTAACTATTCATTCCATCAGTAACTTTTTTTTATCCAACGGA
CGAGGTCCTCTCACCTCTGGATCCAACGGCCGAAAATACATCAAGCGGCCAGATCCAACGGCCAGGAATGCCAAATCGCT
GAGGAGTCGGGAGGAGAGCTCCTATTCTTATTTCTGGATATAGAATCAGCTTTTTGT--TTGAGACACTAAATATAGAAT
CAGCTGGATGCCCAGGAGAACAGCTCAGCCCACTCCAGTCCAGCCCATAAAGCAGCCAGCCGGGCCTAGGGTTTACGAGC
GCCGCAGTACTATAAAAGCGAGGCCCCAAAACTCGCCCCGCTACCGCAGCCGCCACACACGAACC---CCGGGACGAAGC
AGATCGGCGGCGCGTCACTCCAATCACCGGTGAGAAGAAGCCTTTCCCTCCTTTCCACGGCCTCCGCCCCTACGAGGCCA
CTCTATCAACTCCCAATTGTTCAATTTGCTCCCACAGTCCCGACCCATTCGGGATTTGAGGCGCTAGAGA-TTTAGGTTT
ACGGGTGAAATCTCTAGTGTTCCTAGGTATGCTCTCGCATCGTATATGCCATACTGTTTGAATCGGTTGTACAGCGTAGT
TTATTTGTTCGAAACCAGTCAGATGATTTATTTTCATATCAGTATGTGTT-CGTCTGCTCAGCTGTATCTCGTCCGATAG
TACTCTAGATTAGCTTAGGTGCAAGAAATCTGGCGTCTGTTGGGGTCGTTGCTATGGCGATAGTACT-TAGATTTATGCT
CGGCTTCATGTTGAGTGGTTGACATGTGTT-TTTTTTAGGTTAGGATAAATGGCGACGGTTTCGGATTCTCTGGTCTGGG
AGCTTGTCAGGAAGAACAACTGCTTCCTGATCAAGCAGTTCGGCAACAGCAATGCCAAGGTCCAGTTCAGCAAGGAGCCC
AACAACCTCTACAATGTCCACTCCTACAAGTACTCTGGTCAGTGGTTATTGACCTCCCCTGATTGTTTGATTTTCGGATG
CTATGAGTGTCTCTTCGTCCACTGACAGATTGG-----------------TTTTCAGGCCTGGCAAACAAGAAGACTGTG
ACGGTGCAGCCAGCTGCTGAGAAGGAGATGACTGTGGTCCTCTCCACAACCAAGTCAAAGAAGCAGAACAAGCCTGCTGC
GTTCACCCACAAGACTGTCATGCGCAAGGAGTTCCGCAAGATGGCCAAGGCTGTCAAGAACCAGGTATTAGCATCAAAAC
AACCATATTTGTTCTTTTATGATTAAGTTGTGACA-CTGGATGTTCTAGATTAAGTACTCTAAATGACAACTGCTATTGG
AAATATAACCTGTAGCAACCATTCCAGTGTTTCGGTC-------------------------GCTTGACTGCTGAGTTTG
TACAGTCCCATCTCTAATCTTCTAAAGGGACTGTGTTATGAAATCCGCAGATGTAATGCTTTTAATCAACCTGGAACATT
ACTCTATAAACTTGCTCTAATATTTGAAGAATACATATTTACTTTCTATTTGTAACGCTGTATGGTTGTATCTAGTATGT
GACA-TTCACTTGTGACTGAGT-TGAGCCTTAATGTGGAAAAAGCTTTAATT--CAGTAAAAAATGGA------------
--ATGCCTGTCTTGTAAACCGCCCCTGCCTGTTTGTGCTTGGTTTTCAATGGTACTAGCTGGAAATGG------------
-----TCCTTTCTTTGGTGGTTACAA--AGT--GGAGAAATGCTGCTTAAGATGTCCTCCTGTTAAACCGTGTCGACCTC
ATTTGTTTTCTTGATCTAATGGTTAATTCTTCTTGCTTTCCAGGTCAGTGACAACTACTACAGGCCTGACTTGACCAAGC
CTGCTCTTGCAAGACTGAGCGCAGTTTACCGCAGCCTCCAGGTTGCCAAGTCCGGTGTCAAGAAGAAGAACAGGCAGTAA
GCACTGAGGGGCCAATGAGCTTGTTTTGTGGATCCGTTGGTTTATGTTTCCAGCTTTTTAGATTTGTTCTAAGAGTATGG
AGGTTGAATATGATGAATGGTGTGCTCTGCATACTGGCCCAAGTTTTCTCAGTAGGTTCTATATCTGTACCCATGACTAT
GTTGTGAAGCCTCTTGAAATCATTTCCACAATTATTGGCCTTCCACATTTATTGTTTTTGCTGAGTTGCTTGGAGTTGGG
ACTGCTGGTGATGCGTGTTTTTCTGTTATGC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGTGCTCGTTTAAGTGCT-AACTTAT
ATCAACTTGGTATTTTGCGTGGGAATTTAAGTATGCAACTTGAATTTGTATT------------------TTACTTTTTC
TTCTGTCGATCGTGCTACACGGTTTCTTCTTTCAACCTTTGAATTGGTTGGTTCAAGTATTCCGTGAGCATCCAAAGAAA
TTTAACGCCACGGAACAAATTTAACAGTCAAAATCTACGCCATATGGA--------------------------------
-----------AAGTCGATTCCTTGGACGCGAAACCTTGGGGCATCTTGGAAGGAACCATGGAGCCAAACCCACTCTTGA
CAAACCGTGCGGGACACCCACATCTCTACCCGTACCGGTATAAAACCCAGCTGCCACCTATAATCCACAATTTCACCGAA
GAAACCAA--GACCCCGCTGGCATGTCAGTCGGCCAGAGGGCCACCGAGGAAGCGGGCGCCGGCTTGCCGAAGCCGTCGT
CCAGCGGCGCGAGGTATGACCGCCTCTTGTCTGGCCTAGCAGCCGGCGCGCTCGCGGACATAGAGCCTGACAAGCTCAAG
GGCGACATCCAGCGATGGGCCAAGGCGGTCGGGGCGCTGGTGCGCCAGCTGAGCTTCGGCGCCTGGCCTGAGAAGAGCGA
CGGCTCGTCGGAGCACCGGAACGCGGGCGGCGAAAGATGATTCGGCTTGGACTGGACAACTGATGGCACTTCACAGCCAT
CAATCCAGGAACGACACTGATATGACTGGTAACCATCTACAGGCGA
>chr3D_358
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATATAGAATCAGCTTTTTTT--TATAACAA--AAATATAGAAT
CAGCTGGGTGCCCAGGAGAACACCTCAGCCCACTCCAGTCCGGCCCATAAAGCAGGCAGCCGGGCCTAGGGTTTACGAGC
GCCGCACTACTATAAAAGCTCGCTCCCAAAACTCGCCCCGCTACCGCAGCCGCCACACACGACGAACACCGGAACGAAGC
AGATCGGCGGCGCGTCACTCCAATCACCGGTGAGAAGAAACCTA-CCCTCCTTTCTACGCTCTCCTCGCCTAAGAGGCAA
CTCTATCAGCTCCCAATTGTTCAATTTGCTCCTGCAGT-CCGACCCATTCGTGATTTGAGGAGCTACCGATTTTAGGTTA
ACGGGTGAAATCTCTAGTGTTCCTTGCTATGCTCTCGCATCGTATATGCCATACTGTTCGAATCGTTTGTACGGCGTAGT
TGATTTGTTGGAAACCAGTC--------TATTTCCAGATCAGTATATGTTCCGTCTGCTCAGTTGTATCTTGTCCGATTG
TACTCTAGATTAGCTTAGGTGCAAGATATATGGCGTCTGTTGGGACCGTTGATATGGCGATAGTACTCTAGATTTATGCT
CGGCTTCATATCCAGTGTTTGATATGTGATTTTTTTAGGTTCATA--AAATGGCGACGGTTTCGGATTCTCTGGTCTGGG
AGCTCGTCAGGAAGAACAACTGCTTCCTGATCAAGCAGTTCGGCAACAGCAATGCCAAGGTCCAGTTCAGCAAGGAGCCC
AACAACCTCTACAATGTCCACTCCTACAAGTACTCTGGTCAGTGGTTATTGACCTCCCCTGATTGTTTGAATTTCGGATG
CTA-GAGTGTCTCTTCGTCCACTGACAGATTGG-----------------TTTTCAGGCCTGGCAAACAAGAAGACTGTG
ACAGTGCAGCCAGCTGCTGAGAAGGAGATGACTGTGGTCCTCTCCACAACCAAGTCAAAGAAGCAGAACAAGCCTGCCGC
GTTCACCCACAAGACTGTCATGCGCAAGGAGTTCCGCAAGATGGCCAAGGCTGTCAAGAACCAGGTATTAGCATAAGAAC
TACCATA-TTGTTCTTTTATGATTAAGTTGTGATG---------------------------AATGACAACTGGTATTGG
AAATATAACCTGTAGCAACCATTCCAGTGTTTTGGTCA---TAGGTGAAATATAACTGTTATGCTTGATTGCTGAATTTG
TACAGTACCATCTCTAATCTTCTGTAGGGACTGTGTTATGGAACCTGCAGATGTAATGCTTTTAATCAACCTGGAACATT
ACTCTA-------------ATATTCTAAGAATACATACTTTTG----ATTTGTAACATTGTATGGTTGTATCTAGCATGT
GACATTTCACTTGTGAATGAGT-TGAGCCTTAATGTGGAAAAAGCTTTAATT--CAGTAAAGATTGGA------------
--ATGCCTGTCTTGTAAACTGCCCCTGCCTGTTTGTGCTTGGTTTTCTATGGTACTAGTTGGAAATGG------------
-----TCCTACCTTTGGTGGTTACATGTAGT--GTAGAAATGCTGCTTAAGATTTCTTCCTGTTAAACCATGTCTCCTTC
ATTTGTTTTCTTGATCTAATGGTT-ATTCTTCATGCTTTCCAGGTCAGTGATAACTACTATAGGCCTGACTTGACCAAGC
CTGCTCTTGCAAGACTGAGTGCAGTTTACCGCAGCCTCCAGGTTGCCAAGTCCGGTGTCAAGAAGAAGAACAGGCAGTAA
GCACTGAGGGGCCAATGAGCTTGTTTTGTGGATCCGTTGGTTTATGTTTCCAGCTTTTTAGATTTGTTCTAAAAGTATGG
AGGTTGAATATGATGAATGGTGTGTGCTGCATACTGGCACAAGTTTTCTCAGTAGGTTCTATATCTGTACCCATGACTAT
GTTGTGAAGCCTCTTGAAATCATTTCCACAATTATTGGCTTTCCACATTAATTGTCTTTGCTGAGTTGCTTGGAGTTGGA
G-TGCTCCTGATGCGTGTTTTTCTATTACAC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGTGCTCGGTGAGGTGCT-AACTTAT
ATCAACTGGGTATTGTGCGTGGGAACTCAAGTATGCAACTTGTATTTGTCTTTTGGTTATCAGATGGGCATTACTTTTTC
TTCTGCCGATCGTCTT--ACGGTTTCTTGCTTCATCCTTTGAATTGGTTGGTTAAAGTATTACGTGAGCATCCAAGGAAA
TTTAATGCCACGGAACAA-TTTAACAGTCAAAATCTACGCCCTATGGAATCGCGTGCACATGAAATTGCGAAATCGATCT
GTGCAGCCGAAAAGTCGATTCCTTGGACGCGAAACCTTGGGGCATCTTGGAAGGAACCATGGAGCCAAACCCACTCTTCC
CAAGCCGTGCGGGACACCCACATCTCTACCCGTACCGGTATAAAACCCAGCTCCCACCTATAATCCACAATTTCACCGAA
GAAACCAAAAGACCCAGGGGGCATGTCAGTCGGCCAGAGGCCCGCCGAGGACGCGGGCGCCGGCTTGCCGAAGCCGTCGT
CCAGCAGCGCGCGGTATGACCGCATCTTGTCTGGCCTTGCCACCGGCGCGCTCGCGGATATAGAGCCTGACAAGATCAAG
GGCGACATCCGGCGATGGGCCAAGGCGGTCGGGGCGCTGGTGCGCCAGCTGAGCTTCGGCGCCTGGCCTGAGAAGAGCGA
CGGCTCGTCGGAGCACCAGAACGCGGGCGGCGAAAGATGTTTCGGCTTGGACTGGACAGCTGATGGCATTTCACAGCCAT
CAATCCAGGAACGACACTGATATGACTGGTAACCATCTACAGGCGA
>chr3A_360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATAGAATAAGCTTTTTTATATATAACGA--AAGTATAGAAT
CAGCTGTATGCCCAGGAGAACAGCTCAGCCCACTCCAATCCAGCCCAAAAAGCAGCCAGCCGGGCCTAGGGTTTACGAGC
GCCGCAGTACTATAAAAGCTCGCCCCCAAAACTCGCCCCGCTACCGCAGCCGCCACACACGACGAACACCGGGACGAAGC
AGATCGGCGGCGCGTCACTCCAATCACCGGTGAGAAGAAACCTTTCCCTCCTTTCCACAGTCTCCGCGCCTGCGAGGCCA
CTCTATAAGCTCCCAATTGTTCAATTTGCCCCCGCAGTCCCGACCCATTCGTGATTTGAGGCGCTAGCGA-TTTAGGTTA
ACGGGTGAAATCTCTAGCGTTCCTTGGTATGCTCTCGCATCGTATATGCCATACTGCTCGAATCGTTTGTACGGCGTAGT
TGATTTGCTAGAAACCAGTCAGCTGATTTATTTTCAGATCAGTATATGTT-CGTCTGCTCAGCTGTGTCTCGTCCGATAG
TTCTCTAGATTAGC-TAGGTGCAAGAAATCTGGCGTCTGTTGGGGTCGTTGATATGGCGATAGTATTCTAGATTTATGAT
CGGCTTCATATTCAGTGGTTGATATGTGAAGTTTTCTAGGTTAGGATAAATGGCGACGGTTTCGGATTCTCTGGTCTGGG
AGCTCGTCAGGAAGAACAACTGCTTCCTGATCAAGCAGTTCGGCAACAGCAATGCCAAGGTCCAGTTCAGCAAGGAGCCC
AACAACCTCTACAATGTCCACTCCTACAAGTACTCTGGTCAGTGGTTATTGCCCTCCCCCGATTGGTTGAATTTCGAATG
CTATGGATGTCCCTTCGTCCACTGACTGAAGGCTTGGTGTTTGGTGTGATTTTTCAGGCCTGGCAAACAAGAAGACTGTG
ACTGTGCAGCCAGCTGCTGATAAGGAGATGACCGTGGTCCTCTCCACAACGAAGTCAAAGAAGCAGAACAAGCCTGCTGC
CTTCACCCACAAGACTGTCATGCGCAAGGAGTTCCGCAAGATGGCCAAGGCTATCAAGAACCAGGTATTAGCATCAGAAC
AACCATATC-GTTCTTTTATGATGAAAGTTGTGATGCTGGATGGTCTAGATTAAGTACTCTAGATGACAACTGGTATTGG
AAATATAACCTGTAACAACCATTTCAGTGTTTCGGTCCTCGTAGGTGAAATGTAACTGTTGTGATTGGCTTCTTAGTTT-
---AGTCTGATTTCTAATCATCTGTAGGGACTGTGTTATGAAATCTGCAGATGTAATACTTTTAATCAATAAACTG----
ACACTA-------------ATGTTCTAAGAATACATATTTACTCTCAATT------------TGGTTGTATCTAGTATGT
GAACTTTCACTTCCGACCTGTTCTGAGCCTTAATGTGGAAAAAGGTTTTATATCCAGTAAAGATTGGAATTTTCTGAGCA
GTATGCATGTCTTGTAAACTGCCCCTGCCTGTCTGTACTTGGTTTTCTATGGTACTAGTTGATAATGAACATAAACATCA
ATGCTTCCTACCTTTGGTGGTTACAA--ATAGAGGAGAAATGCTGCTTAAGATGTCTTCCTGTTAAACCATGTCACCTTC
ATTTGTTTTCTTAATCTAATTGTT-ATTCTTCTTGCTTTCCAGGTCAGTGACAACTACTACAGGCCTGACTTGACCAAGC
CTGCTCTTGCAAGACTGAGCGCTGTTTACCGCAGCCTCCAGGTTGCCAAGTCCGGTGTCAAGAAGAAGAACAGGCAGTAA
GCACTGAGGGGCCAATGAGCTTGTTTTGTGGATCTGTTGGTTTATGTTTCCAGCTTTTTAGATTTGTTCTAAGAGTATGG
AGATTGAATATGATGAATGGTGTGCTCCGCATACTGGCACAAGTTTTCTCAGTAGGTTCTATATCTGTACCCATGACTAT
GTTGTGAAGCCTCTTGAAATCATTTTCACAATTATTGGCTTTCCACATTAATTGTTTTTGCTGAATTGCTTGGAGTTTGA
G-TGCTGCTGATGCGTGTTTTTCTGTTACACACTAGCAAAAGGGTCCGTGCGTTGCAACGGAGTTAAAAAAAATCCTAAA
GCATCAACTTAACGGTATTTCTATTATGAGCATGTGCACAAAGCTGATCGGTTTATCATATCACCACTAACGTCCTTGCA
TTCTGTTAAGCATGCCTATTTTATTTACTAAGACACCATTACCGCTGTTGAAAATTTAGGAAAATCACACGGTTACTAAA
AAGTGCAATACATAAAAAAAACATACATAACTTTGTGTGACGGCCCGGCTTGGCTTCGTTCGGAACAACGTGTATAAGGA
CTGAGTCAATCAGGCCTTTCCCTTGAAGTTTTCTTATCACTGATACTTTACATTTTTCAAGTGCAACATGTCTAAGCATC
TTAGGCTTTTGTTGCATCAGTACTACATCTACTAAACTACTCCCCGTTCCGAATTACTTGTCGCAGCTATGGATGTATCT
AGATGTATTTTAGTTCTAGATACACTCATTTCTGCGACGAGTAATTTGGTACCGAGGGAGTCTAATGTTTGTTTCATGTT
ATTTACTTTGATTTGAATTGAGGTTTTTAAAAAACCCCTCACTTGAATTTTATTAAATTAACCAACCAAATAAAATTCAA
ATAAGTAATTTTATGGATCTTTGATCTATCTAAATTGAGGGAATTCACATGGTGGTTCTTTTTATTACTCATGAACATAG
CCCCCCAAAAATATTAGGGAGCTAAAAATAACAATCCCATCCATTTCGAGTTAAGCATAACCCACTCTTAATTTGAACTT
CTTAATTAAATATTTGGAATTATATTTGTAGCAATGTAAATATAAGTTCCACTTTGGATAATTCATGTGGAGTTGGCACA
ACCCCAAAAGGCCAAAAAAATAGTTTCAAGTTTCTTTAAACCCAATTGATTTTCAAATTCTTCTTTTAGGCAAGATTTTA
TAATTCTTAAACACCGCTCTCTCTTCCCTGTGTTTTTTTGCCCAACTCGTATAGCAGCAGCAACCCAGTTTGCATGCCAT
TTTTCCTTAGCAAACCCCAGCGGCAGCCTCCTCCCACTTTAACCCTACCGCCTCCCAATTCTTGGGGTCTCTGTCTCTTG
ACCCGGGGTGATGTGCCCCAAGCGCCTCGCTGCATGGCCTCGAGGTTGCACCCGATGACCGGCCGGCGAACCACCTTGGT
TCCCACTCGCTCTCTTCCTCGCCGCACCTCTGTGTGCGCCTCCTCCCGCTGTGCATCATGCGCTACCATGGTCGAGCTGT
GCGCCTTCGGCCATGGCGGCCGTTGCCAAGCTGCGCCCCTTCGCGTGCTGAACCACCTGACCGCCGTTGGACTCGCTCTT
CCTCGCTGCACCTCGGTGCTCCTCCTCTCCCGTTGTGCACCTGGCGCGAGCTGCGTGCGCCTCCGGCCATGAACGGAGTC
GCCCAGCTGCGCCCCCCTAGCGCTCTTGCACCTCCCGGCCTCCACTTGTTCTCCTCTCGTCGCCCGCGTCCCTCGCCCCT
CAACAAGCTTTACTCTTTGCCTCGCCAAGCCTGTTCAATGGTACTGCATCGTCTTCTCCCATCGGCTCTCAGGGCTGCTT
GTTGATTCCCAGTTGGCTTTGTGATATTTCAGCTAACTTGGGAACGTATATAAGACAACTCAACCTAACAGAATGAGGTG
GGATTATTCAACACCCAAGCTAACTTTATCTAATTATTAAAAGCATGCATGTATCGATTGGAATTAACCTTGCTTCGTTC
GGCACAGAGGGCCAGGGTAATTGGGCCTGTCTCCGTATTCTCACTCCATCAGGCTACGTTCGGCTGGGTGGGCCAGAATA
TTTGGCCAGCTTTCGAACCAAGATTATTAAGAGCTAACCCAGTTTTATATTGAAACTTGGGTGCCAGCTCAACTGGTTGT
TGTTGTAGCTTAAGAACGGAAGGTTGTGTAAGTTCGAATCTCAGGACAAATTACTTTTTGCTATTATAGAATAGATGGCG
GGTTAATTAATAGAATTATTTTTCGCAGGTATATATGTAATAGATGGCAGCTTATAATTAATTACCTAATAATAAAGCAA
ATGTATTTTTAAAATATTGTTATTGAAGCAAACTTATAATTTATAGCGCAAGATCCTTTTTTTCATACCGGCGGCGATCC
ATATTGCAAATAAACATCCCACTATAACCATATAGGGAAAAGAAAACATCAATAACTACACATGCATACCTCTGAAAAAT
GTCGCAGGGGAAAACAACAGATTTCTCATCGCGCGCGCGCGAGAGAGAGAGAGGGAGGGAGGAGAGAGGGAGAGAGAGAC
ACTTAGGATTAACCATATTCAACACACGTTTTTTGTTGTTTTGTGTGAACACCGAGGCCATCGCCGGCGAGGGTGAGAAG
AAGGATAAGCAGCAACACAAATATGATGCCTCGCAAAAATAAAGGAGATGGGCCTATTATGATCTTGAGTGATGATTGTT
GAGTTAAGAGCGTGTGTTATGTTTTCTATCCCGTTGCAACGCACGGGCTCTTTTGCTAGTTAACTAAAAACAGAAAACCG
GATTAGTAAACGTACGTACCAAAAACTCATGGGTGGCATCGCTCCGGACAGAACAGTCGTGTGTGGCGGGCCACATGATC
ATATGAATAGTACCATCTCGGATGTAGAAAATAATATAGGTGGAAAAACTGAAACCGTAAATTCACGAAAAGAAGTGTAT
TGTGACGGTGAATCCGACAAAATCAATTCATGATTTATTATTATTAGGGAGGGATGTGCTCGTTGAAGTGCTAAACTTAT
ATCAACTGGGTATTATGCGTGGTAACTTAAGTATGCAACTTGAATTTGTATT------------------TTACTTTTTC
TTCTGTCGATCATGCTACACGGTTTCTTCTTTCAACCTTTGAATTGGTTGGTTCAAGCATTCCGTGGGCATCCAAGGAAA
TTTAACGCCACGGAACAA-TTTAACAGTCAAAATCCACGCCGTATTGT--------------------------------
-----------AAGTCGATTCCTTGGACGCGAAACCTTGGGGCATCTTGGAAGGAACCATGGAGCCAAACCCACTCTTCA
CAAGCCGTGCGGGACACCCACATCTCTACCCGTAACGGTATAAAACCCGACTCCCACCTATAATCCACAATTTCACCGAA
GAACCC--AAGACCCCGAGGGCATGTCAGTCGGCCAGAAGTACGCCGAGGACGCGAGCGCCGGCTTGCCGAAATCGTCGT
CCAGCGGTGCGCGGTATGACCGCCTCTTGTCTGGCCTTGCCGCCGGTGCGTTCGCAGACATAGAACCTGACAAGCTCAAG
GGCGAAATCCAGCGATGGGCCAAGGCGGTCGGGGCGCTGCTGCGCCAGCTGAGCTTCGGCGCCTGGCCTGAGAAGAGCGA
CGGCTCGTCGGAGCACCGGAACGCGGGCGACGAAAGATGATTCGGCTTGGACTGGACAGCTGATGGCACTTCACAG----
----------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S----SS-SSS-SS-----------
--------------------------------------------------------------------------------
-------------------SS-S---------------------------------------SSS---------------
---------------------------------------S--------------------S------S------------
--------S------------------------S-----------------S---------------S-----------S
------------------------S---------------------------------S------S------S-------
-S-------S------------S-------------S--------S----------------------------------
---------------------------------------------------S----------------------------
---------S--S---------S-----S---------------------------------------------------
----S---------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---------------------------------SS--------S-----------------------------S------
--------------------------------------------------------------------------------
-----------------------SS--------------------S----------------------------------
------SSSSSSSSSSSSS-----SS-----------------S--S---------SS----------------------
-------------------------------------------------------------S-S----------------
-------------------S---------------------------S----------S---------------------
---------SS---------------------------------------------S------------S----SS-S--
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
---------------------------------------S---------S-----------------------------S
SS-----S--------------------SS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------S------S----------S------------------------------------------------------
---------------------------------------------------------------------------S----
------------------S----------------------S--------------------------------------
------------------------------------------------------------------------------S-
---S------------------------------------------------S---------------------------
-----------------SS---------------------S--S-------S----------------------------
-----------S-------------------------S--S---------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
----------------------------------------------
>forward_176
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCGA
CGGGGCAACGAATTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_1977
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CTCCTGTTAAACCGTGTCGAC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>forward_177
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CGA
CGGGGCAACGAATTTAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_2025
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------AATTCTTCTTGCTTTCCAGGTCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>forward_321
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCAGGAATGCCAAATCGCT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2402
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-CTGCTGGTGATGCGTGTTTT-----------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------
