>input_sequence_61609
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-------------------------------ATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGACCAGCGCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCC
GCAGGTATGTGC----CGCTCATCGGCGACCAAGACGCGTGTACG------GCCAT------------GGGTGAATGATG
TATGT----ATGCATGGTGCGTGGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTCAAACGGGGCAACTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAG
TAACAATTCTTATCCTTCTTCTTCTGATGATGCATCAGTGGAGATAGATAGATCGGT--------------CGATCCACG
GGCGTACGGCGTTATTTATTTCTTATATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGA
CCCGCACACCCACCGCCCGCTTAATGCCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGTCGCGC
ACCAACACCAGTACGCGGCTGCCACACCCGGTGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCC
AGCTCAGCCGAGCCCGCCTGCAGCCACAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACG
GCACCTCGGCATCGACCTCAACCTCTCCATCAGCCTTGCACCCTACCAGCCG---GACGACCCAGCGGTGAAACAGGAGG
CAGCAACGACGGCGAGCCACAACAATGCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCGCCTCGGGTTCCAG
GGCGCCGGCGAGGGATGCCGCTGCGGCGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTT
CAGATTCATCGCGCCGCTAGAGGGCGGACGCCAATAG-------------------------------------------
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-----------------------
>chr4A_1_TraesCS4A01G217800
GTGAGGTATGCCATTGTTTAATAAAAATATCAATCAACGGATATAATTATTCCCAAATTAAAGTTTATGCCCAAAGGAAT
CTGCCTTTGTGGCCTAGATCGCCATACACCACCACGCTCGTATCAATACCATACCGTCCATCTCTCGTGCATCACCTCAA
TATATTTGAAAATT-TGAAGGGCATAC-ACAGGGCAATTGCTCATCGAAACGGCCGCCACATGTAAGAAATAAGATGGTA
TCATCCTTATGCCCCGGTCGTTGACAGAGATGGAAAAACGAATGTAGTTGCATTTCCTAAGTAGTAAGATATTTTCAACG
AACCGCCAAGTA--TT----------------TTTGCGGGGCAAGCGTAGAATTTTCATGTAAAAGAACCAGTCATTTGA
TGTTGAACTACCCTCCTTCCAAAAACCAAGA------GCCTCACCCCAAAACCCAACCCCGTTGCATTCATTAGGCTGCA
CCTACTCCTGCTGGTGTGCGCTCGCCGGGTACACCTACCAGCTAGCCCCCCTCCT-CCCCCAAAAGAAAAATGA--AAAA
TG----AAAAAAAATCAGAAAACGAATAATAAATAAGCAGAAAAGAAAGGGAGGGGAGAAGGAAGGGAATAGGACAAGCG
GCAGTCGAGCAGAAGAAGCGGAGCATACCTACCTACCAAATCCAGGCCTAGGGCTTTGCAACCACTCGCCCCCACCTCCC
CCCTCTCCTCTCATCGCACCAACTCGGTCAAATGGCCCAGAGGGATCCGCGTCAATGGGGCCCCGCTCCGCTCCACCCCC
ATCCTCCTCCTCCC----------------------------CGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCT
CTCTCCTCCTCGCTCGCTCGCTCTCAAAAAGCTCGCACGCACGCACGCACCACCAACACCGCACCGCTCCTCCTTTCCCT
CAGACCCACCCACAGCCACAACAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGCCGGCTCCTGTCTTCAACGT
ACCTACGTGCCG------GCCGGCGG----CATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGACCAGCGCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCC
GCAGGTATGTGC----CGCTCATCGGCGACCAAGACGCGTGTACG------GCCAT------------GGGTGAATGATG
TATGT----ATGCATGGTGCGTGGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTCAAACGGGGCAACTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAG
TAACAATTCTTATCCTTCTTCTTCTGATGATGCATCAGTGGAGATAGATAGATCGGT--------------CGATCCACG
GGCGTACGGCGTTATTTATTTCTTATATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGA
CCCGCACACCCACCGCCCGCTTAATGCCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGTCGCGC
ACCAACACCAGTACGCGGCTGCCACACCCGGTGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCC
AGCTCAGCCGAGCCCGCCTGCAGCCACAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACG
GCACCTCGGCATCGACCTCAACCTCTCCATCAGCCTTGCACCCTACCAGCCG---GACGACCCAGCGGTGAAACAGGAGG
CAGCAACGACGGCGAGCCACAACAATGCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCGCCTCGGGTTCCAG
GGCGCCGGCGAGGGATGCCGCTGCGGCGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTT
CAGATTCATCGCGCCGCTAGAGGGCGGACGCCAATAGTAGCACTAGTAACAGTAACATTCGGACATATACCTTTTTAACT
AAAGCCACACATGGTTAATTATTAATTAAACTAGCTAGCTCTCTGTATCATGTTCATGAGGAAATTAAATCTACCCCCTT
TCTAT-------TAATTCACAGCTACTAGCTAGCATCGGGCCATGCATGCATATGCATCATCATCTAGTCTAGGTGACAT
AGTTCATGAATAGATCATCAGCTAGCAGCTCCTACCTTCTTTCCTTCTTGTCTTTACTAATCGTGCCATAGGAAGTTCAT
CATCCTCCACTAGATCTAATCAAGCATATCCCTAATCTAGGGGAGTTAGGCCCATCATCTAGGGAGTGAGTGATGCA---
----GAGTAATGAGAGTGGGAGTGAGCGTTATGGTGCTGGCTGGTGGTGGTTATGGGAAGTTAGGTTCTCGGATGTCTGC
AGGCTAGCACATGACATGGCCATCCAGTGACATCACTGAATGGTTGAGTTTTCTATGCATGAAAAAGGGTTTGTCTTGTA
CGCTTTGTGAACGGAGTGGCCGATCCAAGATTAAATTACTAATTAGCCCACCAACTCCGGCATCCACAACCCCAACCCCA
AGAAGGCCAGACACAGCACACGCCAAGCTCTCTGACCATTAAGTCATTAACTAGCCAAAAAGCTCCTCAGTCCATGCCCC
TCCCCTCCTCCTCCATGGCACTTTATCCCCTTCATTAACACCTCTCCCATACCTTCTACCTACCTACCTAACCAGAAAAT
ATGGGCATTCCACATGCTGCCCACTCCCACTCCCCCTCTCCTCTCTACTAGACAAACC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CTTTTTC
ATGCATAGAAAACTCAACCATGCATAGAAAACTCAACCACATGCTGTCCATG----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AGCAAATGTTGTCCCAAAACATCTATCTTAT
TTTCTACGTTAATAAATATGAGGTGTTTTGGATGTTTCAATATACGAACTGAAATAAGTGAACAAGCACATTCGATTCGG
AAAAAGGTTACTCCCTTTGTGAA
>chr4D_3
--GAGATATGCCATTGTGTAATAAAAATATCAATCAACGTAGATAAATATTCCGAAATTAAAGTGTATGCCCAAAGGAAT
ATGCCTTTGTGGCCTAGATCGCCATACGCCACCACGCTCGTC------CCATACCTTCCATCTCTCGTGCATCACCTCAA
TA--TTTGAAAATT-TGAAGGGCATAC-ACAGGGCAATTGCTCATCAAAACGGTCGCCGCAGGTAAGAAATAAGATAGTA
TCGCCCTTTTGTCCCGGTCGCCGGCGGAAC-CGGAAAACTAATATAGTTGCATTTCCTAAGTAGTAAGATATTTTCGACC
AACCGCCAAGTATTTT----------------TTTGCGGGACAAACGTAGAATTTTCATGTAAAAGAACTAGTCATTTGA
TGTTGAACCACTCCCCCTCCAAAAACCAAGAACTGAA-CCTCACCCCAAAACCCAGCCCCGTTGCATTCATTAGGCTGCA
CTTACTCCTGCTGGTGT--GCTCGCCGGGTACACCTACCAACTAGCCCCCCTCCT-CCCCCAAAAGAAAAACGA--AACG
AAACGAAAAAAAAATCACGAAGCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCT
CTCCTC------CTCGCTCGCTCTCAAAAAGCTCGCACGCACGCACGCACCACCAACACCGCACCGCTCCTCCTTTCCCT
CAGACCCACCCACAGCCACAACAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGGCGGCTCCTGTCTTCAACGT
ACCTACGTGCCG------GCCGGCGG----CATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGACCAGCGCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCC
GCAGGTATGTGCCGCGCGCTCATCGGCGACCAAGACGCGTGTACGTGTACGGCAAC------------GGGTGAATGATG
TGTGTGTGTGTGCATGGTGCGTGGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTCAAACGGGGCAACTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAG
TAACAATTCTCATCCTTCTTCTGACGGTGATATATCAGTGGAGAAAGACGGATCGAT--------------CGATCCACG
GGCGTACGGCGTTATTTATTTCTTATATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTATTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGA
CCCGCACACCCACCGCCCGCTCAATGCCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGCCGCGC
ACCAACACCAGTACGCTGCTGCCACACCCGGGGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCC
AGCTCAGCCGAGCCCGCCTGCAGCCACAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACG
GCACCTCGGCATCGACCTCAACCTCTCCATCAGCCTGGCGCCCTACCAGCCGGGCGACGACCCGGCGGTGAAACAGGAGG
CAGCAACGACGGCGAGCCACAACAATGCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCACCTCGGGTTCCAG
GGCGCCGGCGAGGGATGCCGCTGCGGCGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTT
TAGATTCATCGCACCGCTAGAGGGCGGACGCCAATAGTAGCACTAGCAACAGTAACATTCGGACATAC--------AACT
AAAGCCACACATGGTTAATTATTAATTAAACTAGCTAGCTCTCTGTAACATGTTCATGAGGAAATTAAATCTACTACTCC
TTTCCTATTACGTAATTTGC-------AGCTAGCATCGGGCCATGCATGCATATGCATCATCGC-----CTAGGTGACAT
AGTTCATGAATAGATCATCAGCTAGCAGCTCCTACCTTCTTTCCTTCTTGTCTTCATTAATATTGCCATAGGAGGTTCAT
CATCTTCCACTAGATCTAATCAAGCGTATCCCTAATTTAGGGGAGTTAGGTTCATCATCTAGGGAGTGAGTGATGCA---
----GACTGATGAGAGTGGGAGTGAGCGTTATGGTGCTGGCTGGTGGTGGTTATGGGAAGTTAGGTTCTTGGATGTCTGC
AAGGTAGCACATGACATGGCCATCCAGTGACATCACTGAATGGTTGAGTTTTCTATGCATAAAAAAAGGTTTGTCCGCCT
TGTAGAGAGGAGAGGGGGAGTGGGAGTGGGCAGCATGTGAGATG------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CCCATATTTTCTGGTTAGGTTGGTAGGTAGAAGGT
ATGGGAGAGGTGTTAATGAAGGGGATAAAGTGCCATGGAGGAGGAGGAGGGGAGGGGCATGGACTGAGGAGCTTTTTGGT
TAGTTAATGACTTAATGGTCAGAGAGCTTGGCTTGTGCTGTGTCTGGCCTTCTTGGGGGTGGATGTGGATGCCGGAGTTG
GTGGGCTAATTAGTAATTTAATCATGGATCAGTACCACAGTTATCTAAAGCCAGCTTCAGGTTTTTTGAGGCGGATGGGG
GCCAGTCAGGGTATCAGTAGTTTGTTCGGTCTGTCATGTTGCTCTACAGCTATTTGATCCACAGGTATTCCAGTTTGCAG
CAACACAAGACATAAATAGGCCTTTGAGCAGTCTGGATCTTTGGGAGCTGTTTCAACCTAACATAAGTACTTGTCCTTAT
GTGCCCACTTATCGAACAATCCCGTGCTTATACCTCTCTTATACCAATGGCATGTGTAGCCATAAGAGTTTTTCTTTTTC
ATGCATACGTTGGCTTTGTTCGGCTTCGCCGAGTACCCGATAAAACCAACTCAGCAAACTCGAGGCACTCGGCACAGTTG
CGGATTCGGGCACTGATGCAACTGTGTCCGTATCCATTTGTTTTAGAGGACGGAAGCATCAAAATGATGCGGGTTTGCAA
AACAAAACGGCCAAAACTAAAAGAAAAGGCCCAAAACAGAAAATTCAAAAGCAGATATTGTCCCGAAACAACTATCTTAC
TTTCTACGTTAATAAATATGAGATGTTTTGGATATTTCAATATACGAACTGAAATAAGTGAACAACCACATTCGGTTCA-
AAAAAAATTACTCCCTTTGTGAA
>chr4B_131
--------------------------------------------------------------------------------
--------------------------------------------------ATACCTTGCATCTCTCGTGCATCAGCTCAA
TA--TTTGAAAAAAATGAAGGGCATGCAACAAGGCAACTGCTCATCGAAATGGCCGCAA-AGATAAGAAATAAGGCAGTA
CCTCCCCTTTTGCCCCAGTCGACGATAGAGACGGAAAACCAATATACTTGCATTTCCTAAGTATAGTAAGATATCTGACC
AACTGCCAAGGACCCAAGGTATGGAATTTTTCTTTTCGAGGCAAGTGTAGAATTTTCAAGTAAAAGAACTAGCCATTTGA
TGTTGAACTACCCTCCCTCCAAAAACCAATAGCCTCTGCCTCACCCCAAAACCCAACCCCGTTGCATTCATTAGGCCGCA
CCTACTACTGCTGGTGTGCGCTCGCCGGGTACACCTACCAACTAGCCCCCCTCCTACCCCCAAAAGAAAAAAAAACAAAA
TG----GAAAAAAACCACGAAGCGAATAATAATTAAA-AAAAAAGAAAGAGAGGGGGGAGGAAGG-GAATAGGACAAGCG
GCAGTCGAGCAGAAGAAGCGGAGCATACCTACCTACCAAATCCAGGCCTAGGGCTTTGCAACCACTCG-CCCCACCTCCC
CCCTCTCCTCTCATCGCACCAACTCGGTCAAATGGCCCAGAGGGATCCGCGTCAATGGGGCCCCGCTCCGCTCCACCCCC
ATCCTCCTCCTCCCCTCCTCCC--------------------CGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCT
CTCCTC------CTCGCTCTCTCTCAAAAAGCTCGCTCGCTCGCACGCACCACCAACACCACACCGCTCCTCCTTTCCCT
CAGACCCACCCACAACCACAACAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGGCGGCATCTCCTCCTGTCTA
CGTAGGTATCGTATACGTGCCGGCGG----CATGGGTAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGACCAGCGCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCC
GCAGGTATGTGCCGCGC--TCATCGGCGACCAAGACGCGTCTAGGTGTACGGCGAC------------GGGTGAATGATG
TGTGTGTGTATGCATGGTGCGTGGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTCAAACGGGGGAACTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAG
TAACAATTCTTGTC---CTTCTGATGATGATATATCAGTGGAGATAGATAGATCGAT--------------CGATCCACG
GACGTACGGCGTTATTTATTTCTT----ATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGA
CCCGCACACCCACCGCCCGCTCAATGCCATCGCGGCGGCCGCCATGCCCGCGCAGCAGCAGCAGCAGCTCCGGGCCGCGC
ACGAACGCCACTTCGCTGCTGCCACACCCGGTGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCC
AGCTCAGCCGAACCCGCCTGCAGCCACAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACG
GCACCTCGGCATCGACCTCAACCTCTCCATCAGCCTCGCGCCCTACCAGCCA---GACGACCCAGCGGTGAAACAGGAGG
CAGCAACGACGGGGAGCCAGAACAATGCAACAACGTCCACGTCGGCGGTGTGCATGTGCTTGAACCGCCTCGGGTTCCAG
GGCGCCGGCGAGGGATGCCGCTGCGGCGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCAGCGCGCAGCGCATGTT
TAGATTCATCGCACCACTAGAGGGAGGAGGCCAATAGTAGCACTAGTAACAGTAACATTCGGACATATACCTTTTTAACT
AAAGCCACACATGGTTAATTATTAATTTAACTCGCTAGCTCTCTGTAACATGTTCATGAGGAAATTAAATCTACTCCCTT
TCTAT-------TAATTCGC-------AGCTAGCATCGGGCCATGCATGCATCATCA-----------TCTAGGTGACAT
AGTTCATGAATAGATCATCAGCCAGCAGCTCCTACCTTCTTTCCTTCATGTCTTTATTAATATTGTCATAGGAAGTTCAT
CATCTTCCACTAGATCTAATCAAGCATATCCCCAATTTAGGGAAGTTAGGTTCATCATCTAGGGAGTGAGTGATGCATAG
TGATGACTGATGAGAGTGGGAGTGAGCGTTATGGTGCTAGCTGGTGGTGGTTATGGGAAGTTAGGTTCTTGGATGTCTGC
AGGCTCGCACATGACATGGCCATCCAGTGACATCACTGAATGGTTGAGTTTTCTATGCATAAAAAAGG-TTTGTCTTGTA
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>chr5D_985
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-----CGTGCCG------GCCGTCGGCGGACATGGGGAGATCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGATCAGCGGCTCATCGCCCACATCAAGGCCCATGGAGAAGGGTGCTGGAGATCGCTCCCCAAAGCA
GCAGGTACAACATACTCCTATCTTTATTTGGTATGCGGACTCAACATTGGCATGCATGCCGGCCGTGTGGGAGG-TGATG
TTGATTCGTGTGCATGTACTC--GTGTAGGGTTGCTGCGTTGCGGAAAGAGCTGCCGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTTAAGCGCGGCAATTTCACCGACGAGGAGGACGAGCTCATCATCAAGCTTCACGAGTTCCTCGGAAACAAG
TAAACCATCTAA----GCCCCAGCTTGCTATGGCCATCGAAAAATCTGAACTGAAATATATGTGCCGGATGCGATGTAAT
GGCGGACGGCGGTGATATTGATTATTGGCTTCCTTGCTTTG--------------CAGGTGGTCGCTGATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACGTCAAGCGCAAGCTCCTCGCCCGCGGCGTCGA
CCCGCAGACCCACCGCCCGCTCAATGC-----------------------------------------------------
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-----------------------
>chr5B_986
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------GTGCCG------GCCGTCGGCGGACATGGGGAGATCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAGGAGGATCAGCGGCTCATCGCCCACATCAAGGCCCATGGAGAAGGGTGCTGGAGATCGCTCCCCAAAGCA
GCAGGTACAACATA-TA-TATCTTTATTTGGTATGCGGACTCAACATTGGCATGCATGCCGGCCGTGTGGGAGA-TGATG
TTGATTCGTCTGCATGTACTC--GTGTAGGGTTGCTGCGTTGTGGAAAGAGCTGCCGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTTAAGCGCGGCAATTTCACCGACGAGGAGGACGAGCTCATCATCAAGCTTCACGAGTTCCTCGGAAACAAG
TAAGCCATCTAA----GCCCCACCTTGCTATGGCCATCGAAAAATCTGAACTGAAATATATGTGTCGGATGCGATGTAAC
GGCGGACGGCGGTGATATTGATTATTGGCTTCCCTGCTTTG--------------CAGGTGGTCGCTGATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACGTCAAGCGCAAGCTCCTCGCCCGCGGCGTCGA
CCCGCAGACCCACCGCCCGCTCAATGC-----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>chr5A_994
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------CGGCGGACATGGGGAGATCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCT
GGACCAAGGAAGAGGATCAGCGGCTCATCGCCCACATCAAGGACCATGGAGAAGGGTGCTGGAGATCGCTCCCCAAAGCA
GCAGGTACAACATAGTA-TATCTTTATTTGGTATCAGGACTCAACATTGGCATGCATGCCGGCCGTGTGGGAGGGTGATG
TTGATTCGTCTGCATGTATTC--GTGTAGGGTTGCTGCGTTGTGGAAAGAGCTGCCGGCTGCGGTGGATCAACTACCTGA
GGCCGGACCTTAAGCGCGGCAATTTCTCCGACGAGGAGGACGAGCTCATCATCAAGCTTCACGAGTTCCTCGGAAACAAG
TAAGCCATCTAATTAAGCCCCAGCTTGCTATGGCCATCGAAAAATCTGAACTGAAATATATGTGTCGGATGCGATTTGAC
GGCGGACGGCGGTGATATTGATTCTTGGCTTCCTTGCTTTG--------------CAGGTGGTCGCTGATCGCCGGGAGG
CTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACGTCAAGCGCAAGCTCCTCGCCCGCGGCGTCGA
CCCGCAGACCCACCGCCCGCTCAATGC-----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>SNPs
SS---S-----------S---------------------S-S----S------S----------S---------------
S--------------------------S-------------SSSSSSS-------S------------------------
--SS---------------------------------------------------------S--------------S---
--SS----S--S--------SS-S-S--SSSS-S-----S---S--------------------------------S--S
---------------------------------------------------------------------S----------
----------------S---------------------------------------------------------------
----------------------------------------S------------------------------S--------
-----------------SS--S----------S---SS-S---------S------S--S-S-S-S--------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SS-SSSSSS--------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-S------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------S----------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------S-----
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------S-------------------------------------------------------------------
-----------------------------------------------S--------------------------S-----
------------------S-SSSSSSS-----------------------------------SSSSSS------------
--------------------------------------------------------S----SS-----------------
----S-------------------------------S-------------SS----------------------------
------S-S------------------------------------------------------------S----------
------------------------------------------------------------S-------------------
S-SSSS-S-S-SS-S-S-SSS-SSSSSS-SSSSS--SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------SS----SSS--SS-SSS--SSS----SS-
-----SSSSSSSSSSSSSSSSSSSSSSS-S-S--SSSSSSSSSSSSSSSS-SSSSSS-----------------------
--------------------------------------------------------------------------------
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-------SSSSSSSSSSSSSS-SS-SSSSSSSSS-S--SSSSSSSSSSSS-S----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--S-------S-----S--------S
----------------------S----------S-------------------------------S--------S---SS
-----SS----------------
>forward_890
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----------------------------------------------------------------------TCCCCTCTCT
CTCTCCTCCT----------------------------------------------------------------------
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-----------------------
>reverse_2761
--------------------------------------------------------------------------------
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----------------------------------------AATTAGCCCACCAACTCCGG--------------------
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-----------------------
