>input_sequence_61580
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----------ATGGCCCCCGCCGCCGCATCGCAGCACCAGGCGACCG---CCGTGGCGCCGCCGAGCGGCCGCAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTCATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCCGAGGCGCTG
CCGCTCATGCAGCCTGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCC------GGGGAGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCCGGCAGCGTCGCCCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTAGCCTGTGCCGTCCCCGCCGTGGTC
GTCACCGCCGAGCTACCCTTAGCCCCAGAGCACCGCATGCCCGCCCAGCTCGACACAGGCGTCGACGTGCTCCGCCGGCT
GCGGTCCATCGCCATGTCCGACGAAGGCTCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATATCCC
GCGTGTTCCTCGTCGGAGACAGCTCCGGTGGCAACCTCGTCCACCTCGTGGCCGCGCGCGTCGGCGAGGACGACGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCCGGCGGCGTCCCGATCCACCCGGGGTTCGTGCGCGCCACGCGGAGCAAGTCGGAGCT
GCAGGACACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCCTGGCCATGGCGCTGCCCAAGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCGTCTCTCTGCCGCCGATGCTGGTG
GCCGTCGCGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGAAGCACTGCGCGCCGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCACTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGCTCATCGATGCCATCAAGAGCTTCGTTGCCCGCCACTAA------------------------------
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>chr1A_1_TraesCS1A01G257500
GTCTCAAATAGATTTGATTAAGGGGGTAGCTATAGTGCTTGGACAGAATAAAGTCGGTGATTCAGAGGAGTAGAACCACT
TGTATGCCCATCAATCAGCTATCTATCCAGGGCGCGTCTGTACCCGTGAAGCATGCAAAAATTATCCTTACGCGACATGT
CTCACCTGCAGGCTGCAGCCATGATATGTCTGCCAATCAGCCTCATCGGTTCAGGACGCCTTTACTCGTGAAGCACGCAG
AAATATAGCTGATGGTGACATGGCACATCAACTTGCA-GTGTGTATCCCCAGTTAAATCATGTTCCGTGCGAGTCCGA--
----CCCATGCCGCCGTGCCCGTGCGCGGCTGGGCTGGCCAGCCCCACGTAAAATGCCCGGGACGATTTAATTCGTTCCC
ACCTGATGTGTCAAGACACAGAGGCCAGAGAAATTTTGTCTTACTT----------TAATATATTCTACTAGTAT-----
----------------------------ATATTCTGCTGTTGGTAGTGAGAAACAAGTGATTCCC-GACCCCGATCTGTG
ACTGACCCAGGTGTAGTAGTCCAGTCCACGGCACGGTCTCCAACCCCTAGTTCGGGACTTCAGACTTTGGTACTGCGTGT
TTACAACATGAGAACGACCTTCATAAAATCATAAGCAAACGACTTAAAATGTTTTTCTTGGAAGGACCCCCTCCCGTGTC
TCGCAACTAACACGTCGACATCATATCTCGGTCGCGGCCAACGCGG-TCACACAAGTCCACGCGACACACGACCTACTGC
C------------------TTTTTACCAGCACCAACTGCACTGCCGCCACAACAATTCCGATCAAATTCCCTGCCACCCG
CCGCGAAATTTCCCTCCAAAAAATTCAACGGCAAACCGCGACGCGACCACCTTAACCATCG--CCCCCCTGCT-------
--CCGCCTATAAAACTCCACCTCCCCTCCCCTGTTGCCACCACCAAACCATCACACGGTACTCTCACACCGTACT-----
CTACACACGA-------------------CGCGCGACCCGCA----CCGTAGAGCGTGTAACATA---------------
------ACCGATGGCCCCCGCCGCCGCATCGCAGCACCAGGCGACCG---CCGTGGCGCCGCCGAGCGGCCGCAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTCATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCCGAGGCGCTG
CCGCTCATGCAGCCTGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCC------GGGGAGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCCGGCAGCGTCGCCCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTAGCCTGTGCCGTCCCCGCCGTGGTC
GTCACCGCCGAGCTACCCTTAGCCCCAGAGCACCGCATGCCCGCCCAGCTCGACACAGGCGTCGACGTGCTCCGCCGGCT
GCGGTCCATCGCCATGTCCGACGAAGGCTCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATATCCC
GCGTGTTCCTCGTCGGAGACAGCTCCGGTGGCAACCTCGTCCACCTCGTGGCCGCGCGCGTCGGCGAGGACGACGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCCGGCGGCGTCCCGATCCACCCGGGGTTCGTGCGCGCCACGCGGAGCAAGTCGGAGCT
GCAGGACACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCCTGGCCATGGCGCTGCCCAAGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCGTCTCTCTGCCGCCGATGCTGGTG
GCCGTCGCGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGAAGCACTGCGCGCCGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCACTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGCTCATCGATGCCATCAAGAGCTTCGTTGCCCGCCACTAA---A------AAAGCAT-------------
ATTGTATCACACACG--------TGC--------ATATGGTATCCCACAGGTGTGTCTGCCATT--GTCGATCGA-----
----------------------CCATATATACGTGATGGCTTCTGGATTGTATCCGGCCGCCTCGTCTGTTATCAGTGTA
TGCGTCCAAAGTCTTTGGTTATCACGCCATCTGCAGCAGCATTCGTGATCAGTATTGTTTCATGTCACTGTAAGGCCCTG
TTTGGTTCCAAATAAATTACCAACTTATAAATCGAAAAGTGCAAAAGATGACTTATTTTGCCAAACGGACCCAACTTATA
AGTCACCCCAACTTATAAGTCATAAATTGCTCCACCCCAACTTAAAACTTATAAGTTATCCCCTTTTGCATGGGTCCCAT
TACCTTTACATAAAAAAACAAGGTGGGAAGATGTGCTCAGGTGACTTATAAGTCAGGTGGCAACCAAACAGGCGTGACTT
ATAAGTCACTGCTTTTAAGTCACCTGACTTATTGGAACCAAACAGGCCCTAATAACCACTCGTAATCAGGGGAATTGTTT
GCAATATTGATTATGCAAAATTCAGTCATTGTTGTGCAACTCAACATATTGTATAAAATTCATAAAATAATTTCTTCTAA
TAGCATCTCCCAACAGATGTGTATTTTACATCATCAAGTGATTGGATAAAAATATGCATCTGAAAAGTTTTTTTTCATCA
TCAAAAACATCAAACTCTAACAAATGACGTAAAGTAGGGCAGCCGTTTCAATAGATGATGTAAAAAAATAGTTATGTCAC
ACAACAACAGCCAATAGCAGCACATATTCGAATCAAAAGCATCCCAAATTTTGCAAATCATCACACACATAATGAACAAT
ATGTCAAATTCAATATCAAAATAGCAAAATAATGGTCTTATAGTGCATCATAGCAAACATAGTTCATGATCCAACAAATA
AAAGTGCACATAAACATAAAAACAAACACGGCCTCTCAACTAGCATCTTCTTTGTTGTCACTTGGCACGTTGTGAAC
>chr1D_46
GAAAAAGC----------------------------------------------CGGTGATTCAGAGGAGTAGAACCACT
TGTATGCCTATCAATCAGCTATCTCTCCAGGGCGCGTCTGCACTCGTGAAGCATGCAAAAATTATCTTTAGGCGACATGT
CACACATGC-------AGCGATGATATGTCTGCCAGTCAGTCTCATCGGTCCGGGACGCATTTACTCGTGAAGCACGCAG
AAATGTAGCTGATGGTGACATGGCACATCAACTTGCA-GTGTGTATCCCCAGTTAAATCATGTTCCGTGCTAGTCCGA--
----CCCATGCCGCCGTGCCCGTGCGC-----GGCTGGCCAGCCCCACGAAAAGTGCCCGGGACGATTTAATTCGTTCGC
ACCTGACGTGTCAAGCCACAGATGCCAGAGAAAATT-GTCTTACTTTAATCTATTCTAC-------------TAT-----
----------------------------ATATTCTGCTGTTGGTAGTGAGAAACAAGTGATTCCCCGACCCCGATCTGTG
ACTGACCAAGTTGTAGTAGCCGAGTCCACGGCACGGTCTCGAACCCCTAGTTCAGTGTG-CAGACTTTGGTACTGCGTGT
TTACAACATGAGAACGACCTTCATAAAATCATAAGCAAACTTA-TAAAATGTTTTTTTTCGAAGGACCCCCTCCCGTGTC
TCGAAACCAACACGTCCACATCATATCTCGGTCGCGGCCTACGCGCCTCACACAAGTCCACGCGACACACGACCTAATTG
GCCCTTCTCGGCGCCACCTTTTTTACCAGCTCCAACTGCACTGCCGCCACAACAATTCCGATCAAATTCCCTGCCACCCG
CTCCGAAATTTCCCTCCAAAAAATTCAACGGCAAAGCGCGACGCGACCACCTTAACGATCG----CTGCTCCGCCACCGC
CACCGCCTATAAAACTCCACCTCC--TCCCCTGTTGCCACCACCAAACCATCACACGGTACTCTCACACGGTACT-----
CTACAGTCTA-------------------CACACGACCCGCA----CTGTAGAGCGTGTAACCTACAC---CACAGCGAC
G-----GCCGATGGCCCCCGCCGCCGCATCGCAGCACCAGGCCACCA---CCGTGGCGCCGACGAGCGGCCGCAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTCATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCCGAGGCCCTG
CCGCTCATGCAGCCGGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCC------GGGGAGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCGGGCAGCGTCGGCCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTTTACGCCCGCCTCGCGTGCGCCGTCCCCGCCGTGGTG
GTCACCGCCGAGCTCCCGTTAGCCCCGGAGCAACGCCTTCCTGCCCAGATACACACTGGTGTCGACGTGCTCCGCCGGCT
GCGGTCCATCGCCATGTCCGACGAAGGCTCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCAAGGCAGCGGACATGTCCC
GCGTGTTCCTCGTCGGGGACAGCTCCGGTGGCAACCTCGTCCACCTCGTGGCCGCGCGCGTTGGTGAGGACGGCGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCCGGCGGCATCCCGATCCACCCGGGGTTCGTGCGCGCCACGCGGAGCAAGTCGGAGCT
GCAGGACACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCCTGGCCATGGCGCTGCCGATGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGACAGCGCCGCCGCTGGAGTCCGTCCCTCTGCCGCCGATGCTGGTG
GCCGTCGCGGAGAAGGACCTCATCCGCGACACTAACCTCGAGTACTGCGACGCGCTGCGCGCCGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCATTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGCTTATCGACGCCATCAAGAGCTTCGTTGCCCGCCACTAA---T------AATAAAGCATCAAAAAGCAT
ATAGTATCCCACACGTGCCGCACTGC--------ATATAGTA----ACAGGTGTGTCTGCCATTAAGTCCATCGACCTAG
----TATGTGTGAGTTTTACGTCCATATATACGTGATGGCTTCTGGATTGTATACGGTCGCCTCGTCTGTTAT-------
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>chrUn_65
----------------------------------------------------------------GAGGAGGAGAACCACT
TGTATGCCTATCA-TCAGCTATCTCTTCAGGGCGCGTCTGTACTCGTGAAGCATGCAAAAATTATCCTT-CGTGACATGT
CACACATGC-------AGCGATGATATGTCTACCAATCAGCCTCATCGGTCCGGGACGCATTTACTCGTGAAGCACACAG
AAATATGGATGATGGTGACGTGTCGCATCAACTTGT--GTGTGTATCCCCACTTAAATCATGTTCCGTGCTAGTCCGACT
CCGACCCATGCCGCCGTGCCCGTGCGC-----GGCTGGCCAGCCCCACGAAAAATGCCCGGGACGATTTAATTCGTTCGC
ACCTGACGTGTCAAGCCACAGAGGCCAGAGAAAATTTGTCTTACTT----------TAC-------------TAT-----
----------------------------ATAATCTGCTGCTGGTAGTGAGAAACAAGTGATTCCCCGACCCCGAACTGTG
ACTGACCAAGGTGTGGTAGTCGAGTCCACGGCACGGGCTCCAACCCCTAGTTCGGGACTT-AGAGTTTGGTCCTGCGTGT
TTACAACATGAGAACGA---------------------------------------------------------------
------CCAACACGTCCACATCATACCTCGGTCGCGGCCTACGCGCTTCACACAAGTCCACGCGACACACGACCTACTGC
CTTTTTGGCCC--------TTTTTACCAGCTCCAACTGCACTGCCGCCACAACAATTCCGATCAAATTCCCTGCCACCCG
CTTCGAAATTTCCCACCAAAAAATTCAACGGCAGAGCGCGACACGACCACCTTAACGATCG--CTCTGCTCCGCCACCGC
CACCGCCTATAAAACCCCACCTCCCCTCCCCCGTTGCCACCACCAAACCAGCACAC-----TCTCACACCGTACCTCACC
CTACACACGACGCCGCGCA-----------------------------------------ACATACAC---CACAGCGAC
GACCGGACCGATGGCCCCCGCCGCCGCATCGCAGCACCAGGCGACCA---CCGTGGCGCCGACGAGCGGCCGTAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTGATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCGCAGGCACTG
CCGCTCATGCAGCCGGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTTCCC------GGGGAGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCGGGCAGCGTCGGCCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGTG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTAGCCTGCGCCGTGCCCGCCGTGGTC
GTCACCGCCGAGCTCCCGTTAGCCCCGGAGCAACGCCTTCCTGCCCAGATATACACTGGCGTCGACGTGCTCCGCCGGCT
GCGGTCCATCGCCATGTCCGACGAAGGCTCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATATCCC
GCGTGTTCCTCGTCGGGGACAGCTCCGGTGGCAACCTCGTCCACCTCGTGGCCGCGCGCGTCGGCGAGGACGGCGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCTGGCGGCATCCCGATCCACCCGGGGTTCGTGCGCGCCACGCGGAGCAAGTCGGAGCT
GCAGCCAACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCCTGGCCATGGCGCTGCCGAAGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGTGCCGCCGCTGGAGTCCGTCCCTCTGCCGCCGATGCTGGTG
GCGGTCGCGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGACGCGCTGCGTGCTGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCATTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGCTCATCGACGCCATCAAGAGCTTCGTCGCCCGCCACTTA---T------AAAGCATAAAAAG---GCAT
ATTGTTTCCCGCACGTGCCGCACTGC--------ATATAGTATCCCACAGGTGTGTCTGCCATTAAGTCGATCGACC---
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>chrUn_76
---------------------------------------------------------------------------CCACT
TGTATGCCTGTCAATCAGCTATCTCTCCAGGGCACGTCTGTACTCGTGAAGCATGCAAAAATTATCCTTACGCGACATGT
CACACATGT-------AGCGATGATATGTCTG------AGTCTCATGGGTCCGGGACGCATTTACTCGTGAAGCACACAG
AAATATGGATGATGATAACGTGTGACATCAACTTGTGTGTGTGTATCCCCACTTAAATCATGTTCCCTGCTAGTCCGACG
CAT--------------------------------------GCCCCACGTAAAATGCCCGGGACGATTTAATTCGTTCGC
ACCTGATGTGTCGAGCCACAGAGGCTAGAGAAAATTTGTCTTACTT----------TAATCTATTCTACTACTATAATAA
TCTGCTGGTTTTTTTTTGAGAGAGAATAATAATCTGCTGTTGGTAGTGAGAAACAAGTGATTCCCCGACCCCGAACTGTG
ACTGACCAAGGTGTGGTAGTCGAGTCCACGGCACGGGCTCCAACCCCTAGTTCGGGACTT-AGAGTTTGGTCCTGCGTGT
TTACAACATGAGAACGA---------------------------------------------------------------
------CC------------------------------------------------------------------------
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>chr1B_678
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--------AACACGTCCACATCATACCTCGGTCGCGGCCTACGCGCTTCACACAAGTCCACGCGACACACGACCTACTGC
CTTTTTGGCCC--------TTTTTACCAGCTCCAACTGCACTGCCGCCACAACAATTCCGATCAAATTCCCTGCCACCCG
CTTCGAAATTTCCCACCAAAAAATTCAACGGCAGAGCGCGACACGACCACCTTAACGATCG--CTCTGCTCCGCCACCGC
CACCGCCTATAAAACCCCACCTCCCCTCCCCCGTTGCCACCACCAAACCAGCACAC-----TCTCACACCGTACCTCACC
CTACACACGACGCCGCGCA-----------------------------------------ACATACAC---CACAGCGAC
GACCGGACCGATGGCCCCCGCCGCCGCATCGCAGCACCAGGCGACCA---CCGTGGCGCCGACGAGCGGCCGTAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTGATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCGCAGGCACTG
CCGCTCATGCAGCCGGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTTCCC------GGGGAGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCGGGCAGCGTCGGCCGCCTCCCCGTCATCGTGCATCTCCACGGCGGTG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTTTACGCGCGCCTAGCCTGCGCCGTGCCCGCCGTGGTC
GTCACCGCCGAGCTCCCGTTAGCCCCGGAGCAACGCCTTCCTGCCCAGATATACACTGGCGTCGACGTGCTCCGCCGGCT
GCGGTCCATCGCCATGTCCGACGAAGGCTCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATATCCC
GCGTGTTCCTCGTCGGGGACAGCTCCGGTGGCAACCTCGTCCACCTCGTGGCCGCCCGCGTCGGCGAGGACGGCGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCCGGCGGCATCCCGATCCATCCGGGGTTCGTGCGCGCCACGCGGAGCAAGTCGGAGCT
GCAGGACACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCCTGGCCATGGCGCTGCCGAAGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCATCCCTCTGCCGCCGATGCTGGTG
GCGGTCGCGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGACGCGCTGCGTGCTGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCATTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGTTTATCGACGCCATTAAGAGCTTCGTTGCCCGCCACTAA---T------AAAGCAT-------------
ATAGTATCCCACACG--------TGCCGCACTGCATATAGTA----ACAGGTGTGTCTGCCATTAAGTCGATCGACCT--
-----ATGTGTGAGTTTTGCGT-CATATATACGTGATGGCTTCTGGATTGTATCCGGTCGCCTCGTCTGTTAT-------
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>chr1A_782
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---------------------------------------------------ACACTTCTGCTCAAATTCCCTGCCAACCG
CTGCGTAATTTCCCTCCAAAAAATTCAACGGCAAAGCG-----------CCTTAACCATCG--CCCTGCTCCGCCACCGC
CACCGCCTATAAAACCCCACCTCCCCTCCCCCGTTGCCACCACCAAACCAACACAC-----TCTCACACCGTACT-----
CTACACACGACGCCGCGCACTTGCCAGACCGCGCGACCCGCA----CCGTAGAGCGTGTAGCATACAGC---ACAGCGAC
G-----ACCGATG------GCCGCCGCCTCGCAGCACCAGGCGACCA---CCGTGGCGCCGCCGAGCGGCCGCAAGGTGG
TGGACGAGGTGTCCGGCTGGCTGCGCGTCATGGACGACGGCAGCATCGACCGCACCTGGACGGGCCCGCCGGAGGCGCTG
CCGCTCATGCAGCCGGTGCAGCCCTTCGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCC------GGGGAGCC
CAGCCTCCGGGTGTACCTCCCCGAGGTCGCCGCGGGCAGCGCGGGGAGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTGGCCTGCGCCCTGCCCGCCGTGGTC
GTCACCGCCGAGCTGCCCTTAGCCCCAGAGCACCGCATGCCCGCCCAGCTCGACGCCGGTATCGACGTGCTGCGCCGGCT
GCGGTCCATCGCCATGTGCGACGAAGGCGCTCTCGACGAGCCCGCGGCCGAGCTCCTCCGCCAGGCCGCGGACGTGTCCC
GGGTCTTCCTCGTTGGGGACAGCTCCGGCGGCAACCTCGTCCACCTCGTGGCAGCGCGCGTCGGCGAGGACGGCGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCGGGCGGCGTCCCGATCCACCCGGGGTTCATGCGCGCCACGCGGAGCAAGTCGGAGCT
GGAGGAGACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCATGGCCATGGCGCTGCCGGAGGGCGCCA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCGTTCCCCTGCCGCCGATGCTGGTG
GCCGTCGCGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGACGCGCTTCGCGCCGCCGGCAAGGAGGTGCA
GGTGCTCATCAACCGCGGCATGAGCCATTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCCGCCACCGGGGAGC
GAGCCCAGGAGCTCATCGACGCCATCAAGAGCTTCGTCGCCCGCCACTAA---AGCACAAAAAGCAT-------------
ACAGTATCCCACACG--------TGC------------------------------------------------------
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>chr1D_782
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---------------------------------------------------ACAGTTCTGATCAAATTCCCTGCCACCCG
CTGCGAAATTTCCCTCCAAAAAATTCAACGGCAAAACTCGACGCGACCACCTTACCATCGCTCCCCTGCT------CCGC
CACCGCCTATAAAACTCCACATCCCCTCCCCTGTTGCCACCACCAAACCATCACAC-----TCTCACACGGTGCT-----
CTACACACGACGCCGCGCACTTGCCAGACCGCGCGACCCGCA----CCGTAGAGCGTGTAACATACTCCAACACAGCGAC
G-----ACCGATGGCCCCCGCCGCCGCCTCGCAGCACCAGGCGACCA---CCGCGGCGCCGCCGAGCGGCCGTAAGGTGG
TGGACGAGGTGTCCGGCTGGTTGCGCGTGATGGACGACGGCAGCATCGACCGCACGTGGACGGGCCCGCCGGAGGCCCTG
CCGCTCATGGAGCCGGTGCAGCCCTACGCCGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCCGGGGAGGGGGAGCC
AAGCCTCCGGGTGTACCTCCCCGAGGTCGACGCGGGCAGCGCCGGCCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTAGCCTGCGCCCTTCCCGCCGTGGTC
GTCACCGCCGAGCTACCCTTAGCCCCAGAGCACCGCATGCCCGCCCAGCTCGACACCGGTGTCGACGTGCTCCGCCGGCT
GCGGTCAATCGCCGTGTCCGACGAAGGCGCTCTCGACGAGCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATGTCCC
GGGTCTTCCTCGTCGGGGACAGCTCCGGCGGCAACCTCGTCCACCTCGTGGCCGCGCGCGTTGGCGAGGACGGCGCGGAC
GCCTGGGCGCCCCTCCGCGTCGCGGGCGGCGTCCCGATCCACCCGGGGTTCATGCGCGCCACGCGGAGCAAGTCGGAGCT
GGAGGAGACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCATGGCCATGGCGCTGCCGGAGGGCGCTA
CCAAGGACCACCCGTACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCGTTCCCCTGCCCCCGATGCTGGTG
GCCGTCGGGGAGAAGGACCTCATCCGCGACACCAACCTCGAGTACTGCGACGCGCTGCGCGCCGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCATTCCTTCTACCTCAACAAGTTCGCCGTCGACATGGACCCTACCACCGGGGAGC
GAGCCCAGGAGCTTATCGACGCCATCAAGAGCTTCGTCGCCCGCCACTAACAAT------AAAGCAT-------------
ACAGTATCCCACACG--------TGCCGCATCACTGTTATTAACATCAAGGTGTGTCTGCCATTAAGTCGATCGACCATA
TGTCTATGTGTGAGTTTTAAC----------CGTGATGGCTTCTGGATTGTATCCGGTCGCCTCGTGTGTTATCAGTGTA
TGCGTCCAGAGTCTTTCGTTATCAGGCCATCTGCAGCAGCATTCGTGATCGGTACTGTTTCATGTCACTGTAA-------
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>chr1B_782
--------------------------------------------------------------------------------
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---------------------------------------------------ACACTTCTGCTCAAATTCCCTGCCACCCG
CTGCGAAATTTCCCTCCAAAATATTCAACGACAAAACGCGACGCGACCACCTTATGATCGCTCCCCTGCTCCGCCACCGC
CACCGCCTATAAAACTCCACCTCACCTCCCCTGTTGCCACCACCAAACCATCACAC-----TCTCACACCGTACT-----
CTACAGTCTA-------------------CACGCGACCCGCACCGGCCGTAGAGCGTCTAACATACACC---CCAGCGAC
G-----ACCGATGGCCCCCGCCGCCGCATCGCAGCACCAGGCGACCACCACCGTGGCGCCGACGAGCGGCCGTAAGGTGG
TGGACGAGGTCTCCGGCTGGCTGCGCGTGATGGACGACGGCAGTATCGACCGCACGTGGACGGGCCCGCCGGAGGCCCTG
CCCCTCATGCAGCCGGTGCAGCCCTACGATGTGCCCCGCGACGGCCACACGCTCCACGACCTCCCCGGGG------AGCC
CAACCTCCGGGTGTACCTCCCCGAGGTCGACGCGGGCAACGCCGGGCGCCTCCCCGTCATCGTGCAGCTCCACGGCGGCG
GCTTCTGCATCTCCCACCCGTCCTGGGTCCTGTACCACCACTTCTACGCGCGCCTAGCCTGCGCCGTGCCCGCCGTGGTC
GTCACCGCCGAGCTACCCTTAGCCCCAGAGCACCGCATGCCCGCCCAGCTCGACACCGGTATCGACGTGCTGCGCCGGCT
GCGGTCAATCGCCATGTCTGACGAAGGCGCTCTCGACGACCCCGCGGCCGAGCTCCTCCGCGAGGCCGCGGACATGTCCC
GGGTCTTCCTTGTCGGGGACAGCTCCGGTGGCAACCTAGTCCACCTCGTGGCAGCGCGCGTCCGCGAGGACGGCACGGAC
GCCTGGGCGCCCCTTCGCGTCGCGGGCGGCGTCCCGATCCACCCGGGGTTCATGCGCGCCACGCGGAGCAAATCCGAGCT
GGAGGAGACGCCGGACTCGGTGTTCTTCACGCTGGACATGCTGGACAAGTTCATGGCCATGGCGCTGCCGGAGGGCGCTA
CCAAGGACCACCCATACACGTGCCCGATGGGCCCGAACGCGCCGCCGCTGGAGTCCGTTCCCCTGCCGCCGATGCTGGTG
GTCGTCGGGGAGAAGGACCTCGTCCGCGACACCAACCTCGAGTACTGCGACGCGCTGCGAGCCGCCGGCAAGGAGGTGGA
GGTGCTCATCAACCGCGGCATGAGCCACTCCTTCTACCTCAACAAGTTCGCCGTGGACATGGACCCCACCACCGGGGAGA
GAGCGCAGGAGCTCATCGACGCCATCAAGAGCTTCGTCGCCCGCCACTAA---T------AAAGCAT-------------
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>SNPs
-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
--------S---------------S------------------S------------------------------------
-S---S---SSSSSSS---S------------------------------S-S------S--------------------
----------------------------------------------------------------------S---------
---------------------------SSSSS----------------------------------------------S-
---------------S-----------------S--------------------------S----------S--------
--------------------------------------------------------------------------------
-------S-------------S----------------------------------------------------------
----------------------------------------SSSS------------S--S--------------------
---S---S--------S----------------------S-----S----------------------------------
------------------------------S-------------------------------------------------
-S---------------------------------S------------------------------SS--S-S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------S----------S-----------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------------S-------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----------------------------------------------------------S--------------------
--------------------------------------------------S--S--------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------S-----------------------------S-----------------------------------------
---------------------------------------------------------S----------------------
--------S-------S-------S-------------------------S---S------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_737
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GTC
TCGCAACTAACACGTCG---------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_2691
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------AGTCAGGTGGCAACCAAACA----------
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-----------------------------------------------------------------------------
