>input_sequence_61570
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---------------------------------------------ACTACGTGGTTTGGATTCACGTATATACGACCCAC
GCGCTCGCGCACCGGCGGCATATATCGGTGACACAACCTGAAACAATAAA--CCAAGAACAAGAGAGGCGAGAGATGAAG
GTGCTGGTCGCGCTGGACGACAGCGGCGGGAGCCACCACGCGCTAGACTGGGTGCTACGCTGCCTTTTCCCCGTCGGCGA
TCAGCCGGCGACGGAAGAGGCCCGGCCTGATCTGGTGCTCGTCCACGCGCTGGAGCCGCTCCACCACGCCATGTGCCCGG
TCGGCGGGACAGGTGA----GCCGACGACCAGCATCACGGCACACCTCGCGCGACATTGCTGCACACCAGCGGCGCTGAT
ATGGATATGATTGACCACG------CATGCACGCAGGGTCCGCGGTGTACGGCGCGCCGTCGATCATGCAGTCGGTGCGA
GCGGCGCGGAAGGAAAGCGCGCGCAACCTGCTCGACAGGGCCAAGCGGGTCTGCCACACACGAGGGGTATGTACAGCAAT
ATATATAGGCCCTTGTGAGTTGTAAAACACGCCGTCGTCCCATCAACTTAAACCGTGGCTGCTGCGCAGGTGAGCGCGGC
GGCGGTGCTGGTGGAGGGGGAGTCCAGGGAGGCGCTGTACCGCGCCGCGGAGGACGCGGGCGCCG------GCCTGCTCG
TCGTGGGCAGCCGTGGGCTCGGCGCCGTCGGGAGGTACG-TACGTACGTGTGCCCGTCTCATGATTGATCGCGATACACA
CGTGATTATCACCGACTAGGTCGGTCTACACATGTGCTGATTCTTTTGGTTGCAGGGCGTTCCTGGGGAGCGTGAGCGAC
TACTGCGTGCACCACGCGAGGTGCCCCGTCATGGTGGTCCCGCCGCCGCCCGTCGACAAGGATGGCCAGCGGATGAGATC
ATCTCCAATCAGATGCCAGTCACCATGTTTTCAACAGGGGTGCTTAATGGCCGAATGATCGTCCCGCGATTTGTCATCGG
GGCTTTTCACTG------CCCGTATGTC------TATGTTCGATGTTCTAGCTTGTTGCCACTGTCAACAGATCGAGGAG
CGTTCATTAATAAAAT--TCACCATGATTG--------------------------------------------------
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>chr5B_1_TraesCS5B01G150100
GACGAAGATTTCGCCAATCTCCGCATGTTGCTACCGGATGAAGCATCGGTGGCATTTGTTGTGGCCTCATCTTGGATGGA
CTCCAGGATGGCGGTTCGCTCCGCCATCTCCCCCGTTTGGATGACCTCAAACTCTGTCATGACGTCCTTCATGGCGAATC
CCACAGCTGGCTCTGCCTCCTCCTTCGCCCCCGCCACGTCCTCCTCCTCTGGACCCGCCCCTCCATGGGCCGGGGGTCCT
GCTCTGCCTCCGGTTGCTGCCCCCTCCCCCTCCTCCTCCGCCTCCTAATCCTCCTCCTGCTTCGGCTCCGACGAATCCAG
AGACAGGCGGAAGCGACACGAGCAGCACGCCTTGCCTGGATCTCCTCCTCAAGTTGCAACCAGTCCCAACATGGCGTAGG
TGGTGATCGTCTGTCGAGCCATGGCTAGTGGCTACGGCGAGCGGATGGAAGCTTGCGGCACAGGTGTGGGGAAGGGGGGG
GGGAGAGGGAAGGAATGGGGGTGGGCTGTAGTCGACCGACTTAAATAGCAGGACTTGCTCCCTCGGGTGGCACGTCGGAA
CAGCGCCACATGGCGTGGAGCGGAGGAGGGGACCAAAGGTCTCTTCGTGTCCCTGCGTGGCCTTGTGCGGTCAATCCTTC
GTGTCGCCTGCATCTGGACGTGTCCAGGTGTTTTATATCCGCCCTACATATGGACCGATTATAAAGAGTGTCGGTCAGTT
CACACGTTTGAGCCGAATTTGCGAATTCTGGTTAGGTACGGTTTTTGGGTCCGGATAGCGGGCAAAAAGTGTTCGCGGGT
AGTTTGTTCCGGCCGGTTGCTCGCGGCCGTACCGCTCCAGGCTCGAGCAGATGGTGGCGTGGCGCTTACGGGGCCAGGGC
GGCGCGCGGCTGTTTGCTCCTGCATGCATGG-----ATGCCACGCGCGCACGGCGCGTCGTCCTCTCGCCGTCGCCATCC
ATGACCCACCGCTCCAGAGCTCTGTCCGTTCTCCCTCTCCACCGTACTACGTGGTTTGGATTCACGTATATACGACCCAC
GCGCTCGCGCACCGGCGGCATATATCGGTGACACAACCTGAAACAATAAA--CCAAGAACAAGAGAGGCGAGAGATGAAG
GTGCTGGTCGCGCTGGACGACAGCGGCGGGAGCCACCACGCGCTAGACTGGGTGCTACGCTGCCTTTTCCCCGTCGGCGA
TCAGCCGGCGACGGAAGAGGCCCGGCCTGATCTGGTGCTCGTCCACGCGCTGGAGCCGCTCCACCACGCCATGTGCCCGG
TCGGCGGGACAGGTGA----GCCGACGACCAGCATCACGGCACACCTCGCGCGACATTGCTGCACACCAGCGGCGCTGAT
ATGGATATGATTGACCACG------CATGCACGCAGGGTCCGCGGTGTACGGCGCGCCGTCGATCATGCAGTCGGTGCGA
GCGGCGCGGAAGGAAAGCGCGCGCAACCTGCTCGACAGGGCCAAGCGGGTCTGCCACACACGAGGGGTATGTACAGCAAT
ATATATAGGCCCTTGTGAGTTGTAAAACACGCCGTCGTCCCATCAACTTAAACCGTGGCTGCTGCGCAGGTGAGCGCGGC
GGCGGTGCTGGTGGAGGGGGAGTCCAGGGAGGCGCTGTACCGCGCCGCGGAGGACGCGGGCGCCG------GCCTGCTCG
TCGTGGGCAGCCGTGGGCTCGGCGCCGTCGGGAGGTACG-TACGTACGTGTGCCCGTCTCATGATTGATCGCGATACACA
CGTGATTATCACCGACTAGGTCGGTCTACACATGTGCTGATTCTTTTGGTTGCAGGGCGTTCCTGGGGAGCGTGAGCGAC
TACTGCGTGCACCACGCGAGGTGCCCCGTCATGGTGGTCCCGCCGCCGCCCGTCGACAAGGATGGCCAGCGGATGAGATC
ATCTCCAATCAGATGCCAGTCACCATGTTTTCAACAGGGGTGCTTAATGGCCGAATGATCGTCCCGCGATTTGTCATCGG
GGCTTTTCACTG------CCCGTATGTC------TATGTTCGATGTTCTAGCTTGTTGCCACTGTCAACAGATCGAGGAG
CGTTCATTAATAAAAT--TCACCATGATTGATGTCAACCCCGGCACCCCGCTACTACAGATCCAGTACAGGAAAAACATT
TCGTTATCTCGTGTTTCGCCATAAGCTGAGCGTAATTTGTCGGCCTCTCGGCTTATATCAATGTAAGCCGAGCACAAACC
TTAAG--ACACGGCGAAGGACGGGAACTCGGCTTACAGCGCTGCACGGCGAAGGAGGGATCAGAAACTGTTGATCATACT
TCTGAATTTCTCCGAGCCTGCTTCTTCGTCATGTCAATTTCAAACTGAGTTCAATACATTGGAAGCGGTTTCAGTAAACC
TCACAGTCTCTTCCTATAACCTAATAATGT-----AAATAGTACTCCGATGACT--------------------------
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------------------------------------------------------TGGATTAATCAAGAGTGGCAACATAT
TC----AGGTACGGACAATGCCCA------GATATACCAACTGACAAGGAAGAATGCTCCTGAACAGCCACTGTATGTCT
GTATCCCTTTTTTAGC--TAACCATGACTCGGTTAACAATAAAGCGACTCCGGAAATTCCATGCGACGATTAGCGATCAG
CTGAACTGTATGTCCATGAATCAGCAACTGAACTACCGAAATCGCAGCCAACCACTGAAGAGCCTTTCTTTTGTTTCGAA
CAGAGGCTGAAGAGCCTTTCTGAAGGTGCTGTAGTATTTCAGGCTAAAACATGGCAGTTTGAAAAGCCAGCAGTTGCTGG
ATCTTTCAAAAAAG----AAAACATGGCAGTTTGTCAAAATACACAGCTTTGTTCTTTTTTCTGTTGGTCGGAAAAGGCT
TGGGTTGTTAGAGCTGTCTGCACACTTGTCTGTCAACTCAAGCAACCTAACAGAAAGCATTTCCTGCAGATAAGAAAGGT
TTCTGCAGGAAGTAACCGTTTTGACAAGGACTTCGCCTGT-ACATCACATGGTTGAAATTATTGCCAGAAGAGAAAAAAA
AA---GTATGACCTTCTTTAAACAACATTTATTTGGTTAGAAAATCAATCATAACTTTATCAATACTATTTTGGTCAATT
ATGCTTATTTCAACAGT
>chr5A_856
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-------------------------------------------------------GGCTTGGCGCTTACGGGGACACGGC
GGCGCGCGGCCGTTTGATCGTGCATG-------GATATGCCACGCGCGCACGGCGCCTCGTCGTCTCGCCGCCGCCATCC
ATGACCCACCGCTCCACAGCTCCGTCCGTTCTCCCTCTCCACGGCACTACGTGGTTTGGATTCACGTATATATGACCCAC
ACGCTCCCGCACCGGCCGCATCGGCG------ACAACCTGAGTCAATAAACACCAAGAACAAGAGAGGCGAACGATGAAG
GTGGTGGTCGCGCTGGATGACAGCGGCGGGAGCCACCACGCGCTAGACTGGGTGCTACGCTCCCTTTTCCCCGCCGGCGA
TCAGCCGGCTACGGAGGAGGCCCGGCATGAGCTCGTGCTCGTCCACGCCCTGGAGCCGCTCCACCACGCCATGTGCCCGG
TCGGCGGGCCAGGTGAGCTAGCTGACGACCAACATCACGGCACGCCTCGCGCGACATTGCTGCACATCAGCGGCGCTGAT
ATGAATATGATATGATGTGATTGACCACGCACGCAGGGTCAGCGGTGTACGGCGCGCCGGAGATCATGCAGTCGGTGCGA
GCGGCGCGCAAGGAGAGCGCGCGCAGCCTGCTCGACAGGGCCAGGCGGGTCTGCCACGGACGAGGGGTATGTAAAGCA--
--ATATAGGCCCTTGTGAGTTGTGACACACGCCGTCGGCTCATCAACTTAAGCCGTGGCTGCTGCGCAGGTGAGCGCGGC
GGCGGTGCTGGTGGAGGGGGAGTCGAGGGAGGCGCTGTGCCGCGCCGCGGAGGACGCGGGCGCCG------GCCTGCTCG
TCGTCGGCAGCCGCGGGCTCGGCGCCGTCGGGAGGTGCGTTACGTACGTGTGCCCGTCTCACGATTGATCGCGATACATG
CACGTACGTACGAT--------------------TGCTCATTCTTTTGGCTGCAGGGCGTTCCTGGGGAGCGTGAGCGAC
TACTGCGCGCACCACGCCAGCTGCCCCGTCATGGTGGTCCGGCCGCCGCCCGTCGACAAGGATGGCCAGCGGACGAGGTC
ATCTCCAATCAGCTGCCCGTCACCATGTTTACAACAGGGGTGCTTAATGGCGGAATGATCGTCGCGCG-TTTGTCATCGG
GGCTTTTCACTG------CCCGTATGATGTCTAGTATGTTCGATGTTCTAGCTTGGTGTCACTGTCAACAGATCGAATAG
CGTTCATTAATAAAAT--TCACCATGATCGATGTCAACCCAGTTACTAAACG---------------CAGGAAAAACATG
TGCGTAGTT-GTGTTTCGCCGTAAGCCGAGTGTAATCTGTCATCCGCTCAGTTTATATCACTGTAAG-------------
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>chr5D_860
TGGCG---------------------------------------------------------------------------
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-----------------------------------------------------------------TTACGGGGCCAGGGC
GGCGCGCCGCTGTTTGCTCCTGCATGATGGATAGATATGCCACGCGCGCACGGCGCCTCGTCCTCTCGCCGTCGCCATCC
ATGACCCGCCGCTCCAGAGCTCCGTCCGTTCTCCCTCTCCACCGCAGTACGTGGTTTGGAGCCACGTATATATGGCCCAC
GCGCTCCCGCACCGGCCGCATCGGCG------ACAACCTGAATCAGTGAACACCAAGAACAAGAGAGGCGAGAGATGAAG
GTGCTGGTCGCGCTGGACGACAGCGGCGGGAGCCACCACGCGCTAGACTGGGTGCTCCGCTGCCTCTTCCCCGCCGGCGA
CCAGCCGGCGACGGAGGAGGCCCGGCATGAGCTGGTGCTCGTCCACGCCCTGGAGCCGCTCCACCACGCCATGTGCCCGG
TCGGCGGGCCAGGTGAG-----TGACGACCAGCATCACGGCACGCCTCGCGCGACGTTGCTGCACACCAGCGGCGCTGAT
ATGAATATGATTGACCACG------CATGCACGCAGGGTCCGCGGTGTACGGCGCGCCGGCGATCATGCAGTCGGTGCGA
GCGGCGCGCAAGGAGAGCGCACGCAGCCTGCTCGACAGGGCCAAGCGGGTCTGTCACACAAGAGGGGTATGTGAGTCACG
CCATCGGTGCGCGTGAGTGAGGTAATTAACCGATG------ATCAACTTAAACCGTGGCTGCTGCGCAGGTGAGCGCGGC
GGCGGTGCTGGTGGAGGGGGAGTCCAGGGAGGCGCTGTGCCGCGCCGCGGAGGACGCGGGCGCCGGCGCCGGCCTGCTCG
TCGTGGGCAGCCGCGGGCTCGGCGCCGTCGGGAG----G-TACGTACGTCTGCCCGTCTCACGAGTGATCGCAACTAGCT
CTACCCATG---------------------CATGTGCTCATTCTTTTGGTTGCAGGGCGTTCCAGGGGAGCGTGAGCGAC
TACTGCGCGCACCACGCGAGCTGCCCGGTCATGGTTGTCCCGCCGCCGCCCGTCGATAAGGATGGTCAGCGGACGAGGTC
ATCTCCAATCAGATGCCAGTCACCATGTTTTCAACAGGGGTGCTTAATGGCCGAATGATCGTCGCGCG-TTTGTCATCGG
GGCTTTTCATTTCACTGCCCCGTATGCC------TACGATCGATGTTCTAGCTTGGTGTCA------ACGGATCGAGTAG
CGTTCACTAATAAAAAAATCACCATGATCAATGTCAACCCCGCTGCTACAGAGTACAGACACTATGA---GAAAAACATT
TGTTG-TCTCGTGTTTCGCCGTAAGCCGAGTGTAATTTGTCGGCCGCTCGGCCTATATCAATGTAAACCGGGTACAAACC
CTAAAACACACG-CAAAGGAGGGGGCCTCGGCTTACAGCGCTGCACGGCGAAGGAGGGATCAGAAACTATTGATCATACT
TCTGAATTTCTCCCAGCCTGCTTCTTCGTCATATCAATTTCAAACTGAGTTCAATACATTAGAAGCGGTTTCAGTAAACC
TCACAGTCTCTTCCTAA---------------------------------------------------------------
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----------------------------------------------------TGTGGATTAATCAAGAGTAGCAACATAC
TCCTTCAGGTATGGACAATCCCCA------GATATACCAACCGACAAGGAAGAATGCTCCTGAACAGTAACTGTATGTCT
GTATCCCTTTTTTTTAGGTAACCATGACTCGATTAACAATAAAGCGACTCCGGAAATTCGATGTG-------GCAATTGG
CTGAACTGTATGTCCATCAATCAGCAACTGAACTACCGAAATTGCAGCCAACCACTGAAGGA----------------AA
CGGAGGCTGAAGAGCCTTTCTGAAGGTGCTGTAGTGTTTCAGGCT-----------------------------------
------------------AAAACATGGCAGTTTGTCAAAATAGACAGCTTTGTTCTTTTTTCTGTTGGTCGGAAAAGGCT
TGGGTTGTTAGAGCTGTCTGCACACTTGTCTGTCAACTCAAGCAACCTAACAGAAAGCATTTCCTGCAGATAACAAAGGT
TTCTGCAAGAAGTAACCGTTT-GATAAGGACTTCACCTGTAACATCACATGGTTGAAATTATTGCCAGAAGAGAAAAAAA
GTATGACC------------------------------------------------------------------------
-----------------
>chr5A_2186
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---------------------------------------------------------------TAAGACGAGTACAAACT
CTAAAACACACGGCAAAGGAGGGGACATCGGCTTACAGCGCTGCACGGCGAAGCAGGGAACAGAAACTGTTGATCATACT
TCTGAATCTCTCCCAGCCTGCTTCTTCGTCATGTCAATTTCTAACTGAGTTCAATACATTAGAAGCGGTTTCAGTAAACC
TCACAGTCTCTTCCTATAACCTAATAATGTCTGGTAAATAATACTCCCTCCGTAAACTAATATAAAAACGTTTAGAATAA
TAAAATAGTAAACGTTAATAGCGGGAGTACTCCCTCCATAAAAAAATATAAGAGCGTTTAGATCACTTCAGGAGCATTCT
TCCTTGTCAGTTGGTATATCTAGGCATTGTCCATACCTGAATATGTTGTTACTCTTGATTAATCCAAGTTACCGGAATAC
TCCCTCTGTAAAGAAATAAGTAGTAGCGCTGATATACGAACTGACAAGGAAGAATGCTCCTGAACAGTAACTGTATGTAT
GTGTCCCTATTTTAGC--TAACCATGACTCGGTTAACAATAAAGCGACTCCGGAAATTCCATGCGATGATTAGCGATTAG
CTGAAC----TGTCCATCAATCAGCAACTGAACTACCGAAATCGTAGCCAACCACTGAAGAGCCTTTCTTTTCTTTCCAA
CAGAGGCTGAAGAGCCTTTCTGAAGGTGCTGTAATATTTCAGGCTAAAACATGGCAGTTTGAAAAGCCAGCAGTTGCTGG
ATCTTTCAAACAAAAAAAAACACATGGCAGTTTGTCAAAATACACAACTTTGTTCTTTTTTCTGTTGGTCGGAAAAGGCT
TGGGTTGTTAGAGCTGTCTGCACACTTGTCTGTCAACTCAAGCAACCTAACAGAAAGCATTTCCTGCAGATAACAAAGGT
TTCTGCAAGAAGTAACCGTTT-GATAAGGACTTCACCTGTAACATCACATGGTTGAAATTATTGCCAGAAGAGAATAAAA
GTACTGTATGACCTT-----------------------------------------------------------------
-----------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------------------
--------------------------SSS-S-------------------------S-----------------------
----------------------S---------------------S---------------------------S-------
------S---------S----SSSSSSSSSSS----------S-------------------------------------
-------------------------------------------------------------------------S------
---------------S----------S---S-----------------S-------------------------------
--------S-------------S--------------------S------------------------------------
---S-------------------------------------------------------S--------------------
--------S-----S----------S-----------------------------------------------S----SS
SS-----------------------S-----------S-S----------------------------------------
--------------------------------------S-----------------------------------------
-------------S----------------------S------------------------S-----------------S
-SS-SSSS-SSSSSSSSSSSSSSSSSSSSS--------S-----------------------------------------
-------S------------S----------------------------------------------------S---S--
---------------------------------------------------------------S----S-----------
--------------------------S----------------------------S--S------------------S--
----------------------------S-------------SS--SS-S-SSSSSSSSSS-S-SS--------------
-SS-----------------S-----S---S--------------S--------------------------S-------
S---S---------S-----S----S------------------------------------------------------
-------------S----------------------------------------------S-------------------
----------------------------------------S------SSSSSSS--------------------------
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----------------------------------------------------------------------S--------S
-----------S-------------------------------------------------------SS-----------
------------------------------------------------------------------S----------S--
-----------------S------------------------------------------------------S----S--
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----------S--S------------------------------------------------------------------
-------------------------------------------------------------------------S------
-------S-------------S--S---------S---------------------------------------------
SS-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_391
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---------------------------------------------------AGTTGCAACCAGTCCCAACA---------
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>reverse_2123
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------------------------------------------GCACCCCGCTACTACAGATC------------------
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