>input_sequence_61569
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--------------------------------------------------------------------ATGATTAGTGCT
TCTTCAATC-----------------------------------------------------------------------
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----------------------------------------------------------------------CAGCTAAAAG
CTTTGGTATGTCTCCCTTTTCACATACTTGACATCAAGTTATATAGACATACCAAAACACAC------------------
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---------------------------------------------------------------------ATACCCGCTTA
AAGTTCAAAATTAAGGATCCTTAGCTCCTTACAGCAGAAAATTCAGACAAGAGTAAAGCAGAGGACAAAACACACATGAC
CAACATTACAACAATGAAGCAAAAAAAACCGCATTAGAAATT--------------------------------------
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---------------------------------TCGTTGACTCTTGTTATGCTCTAATGACATATATACATATCCCATTG
CCAGGCATTGGCATCACCAGCGGTTCCTCAAAATGCTCGGGTGGCTTTATACCAAGCACTGCCTCCTCGGATCAAACCAG
TCCTGCATACCCAACTGCGGCGGCGTTTTCCCCTCGGAGAAAAGCAGGTAGGTGGCCAACTCTTTTCAGCAAACATTACA
TATG---------AATAGGGAATCCACCCCTTGTCATCTTGGCTGCATCTGCATCTTGTAGACCATGACGGTAGCAGAGG
TGAGAGCTGAAATGAACAGGGTATTGCGGTGGCTTGTGCCAGCTGCAGAATCCACCAGGTACTTCATACAACTTTTCCAG
TTAACGGAACACCACTACTTAAAGAGTTGAAGTACATTACTTTTAACAATATTGCACAGAAAGCTATAGATGTTGGAAAA
-TTGT---TCTTAATTGTATATATGTTCACGGCTCACCTGGTTGCCTTCTTGATGC--ATCAGGCTTTGCC---------
------TTCAAGAATGGGCGATGAAAGGGTACGTAACGTA----------------C----GACCACTCGTCTCGTTTCT
GCGTTTGCTCATGC--AACAGATGTATAAGCTGCAATGTTCTGTCAGGCTGTCCCTGATGTCTCATGAATCAAATCT--C
TTTTACAGGATGGAGGGTGTCAATGTTGACGAAACAAACTGGTTCGAACAAGAGAATCATGTCAGTGTCGGTTCCATGCT
CGCTCATGCAGATGCCAAAGTGAGCAAGGTAGAGACGCTGTACTACGCCGACAAGGAGACGACCGAAGGTTACATAGCGG
AGCTTGTTCTGGCTCTTCATCTTCTTGTTTCGCTGCCTACGGAGGAGAAGTGA---------------------------
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>chr5A_1_TraesCS5A01G292800
GCTCTGCTCCCAAAGGAAGAAGGGTATCGATCCAAGCTTTTGAGGTTGCCAACACAATTGCCAGGGCCTCCAGTCTCATA
AAA-TCCCTCTCCAAGCAAAGAATAAGGCACCTGAAAGAGGGCGTGCTTAGGTCTGAAGGTGTCCGCTGTCTTATTTCTG
AAGATTACAGTCTGCTGTCCATTCTCGTTGAAGATGATATACGGTAACATGATTTTCTGGGCCTGTCTGTTTAGCAGTTT
ATTTAA---GAAAAGTCTTACATGCATCCTCTTTATTGGAATTATGCAGAGAAGAGTTGAGACTACTTTGTATAGAGGTT
GCCCGGCTTGGAGATCTGTGTGAAGGCCCTCAATGGCACAATCTCAGTA------TCTGCAGGTAAAACTTATCGCCGTT
ACCACTTAATTCACTTCGGAGTCCATGTCTTCACCATGCCTCATCTTTTTT-TGTTCTGTGTACATA-ACATACACTGTT
CTTGTCAATGAACAGA--TGTGGTTCTGCACTGC------CATCTAAGAACAACTCCAGTGAAGAAGCACCTCCCAGTTT
GCAGTATCTGATAAAATTGGCACAAAATACATGGGTCAGTATTTCTTCTTGAGAGAGAAATTTCTAAACCATGGTCGCAG
AGCTGTTTTCACCTGACAAGCCAGCTATGTCTTTTCTTTGCGCGCTTACATCCTTGTAGAGATGTTTTCAGCAGACAAAA
CACTGAAATCCCGTTTTCACTTTTCCATGTGTTCAGGTTCTGCGCCAAGAAATGCTAGCACTGGACAGACTTGAGCACAC
TCATTGTACGACAAACCAT----TTTGTCACTGGCATTCGATGAGTCTCCTCTCCTTTCTAATTACACGGTAACC----A
TATGCAGATGTGGCAGCTATTCCTGTTAAGAAACAAATTGATGCTATCAAGAGCCAAAGGGGTGCGGTGAAGGTCTTGAA
AAGGAAATCGCTCTGGTCGAAGAGTATGGAAGATGTAATAACGCATGAGGAATTGAGGACGATGACTTATGATTAGTGCT
TCTTCAATC-----------------------------------------------------------------------
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----------------------------------------------------------------------CAGCTAAAAG
CTTTGGTATGTCTCCCTTTTCACATACTTGACATCAAGTTATATAGACATACCAAAACACAC------------------
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---------------------------------------------------------------------ATACCCGCTTA
AAGTTCAAAATTAAGGATCCTTAGCTCCTTACAGCAGAAAATTCAGACAAGAGTAAAGCAGAGGACAAAACACACATGAC
CAACATTACAACAATGAAGCAAAAAAAACCGCATTAGAAATT--------------------------------------
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---------------------------------TCGTTGACTCTTGTTATGCTCTAATGACATATATACATATCCCATTG
CCAGGCATTGGCATCACCAGCGGTTCCTCAAAATGCTCGGGTGGCTTTATACCAAGCACTGCCTCCTCGGATCAAACCAG
TCCTGCATACCCAACTGCGGCGGCGTTTTCCCCTCGGAGAAAAGCAGGTAGGTGGCCAACTCTTTTCAGCAAACATTACA
TATG---------AATAGGGAATCCACCCCTTGTCATCTTGGCTGCATCTGCATCTTGTAGACCATGACGGTAGCAGAGG
TGAGAGCTGAAATGAACAGGGTATTGCGGTGGCTTGTGCCAGCTGCAGAATCCACCAGGTACTTCATACAACTTTTCCAG
TTAACGGAACACCACTACTTAAAGAGTTGAAGTACATTACTTTTAACAATATTGCACAGAAAGCTATAGATGTTGGAAAA
-TTGT---TCTTAATTGTATATATGTTCACGGCTCACCTGGTTGCCTTCTTGATGC--ATCAGGCTTTGCC---------
------TTCAAGAATGGGCGATGAAAGGGTACGTAACGTA----------------C----GACCACTCGTCTCGTTTCT
GCGTTTGCTCATGC--AACAGATGTATAAGCTGCAATGTTCTGTCAGGCTGTCCCTGATGTCTCATGAATCAAATCT--C
TTTTACAGGATGGAGGGTGTCAATGTTGACGAAACAAACTGGTTCGAACAAGAGAATCATGTCAGTGTCGGTTCCATGCT
CGCTCATGCAGATGCCAAAGTGAGCAAGGTAGAGACGCTGTACTACGCCGACAAGGAGACGACCGAAGGTTACATAGCGG
AGCTTGTTCTGGCTCTTCATCTTCTTGTTTCGCTGCCTACGGAGGAGAAGTGAGTCCAAGCTGAAGGCACTGATGAACAG
TTGAG------GCGAGCACAACTTGAAGCATCTGAATTAACTTATCGTCGAATCTACGCTGTCGAAGCAATGAGGGGATA
AGGCAGAGCCATGGATGCCTGATTT-----TTTCGCCCTCTTCAGATGCGTCAAACAGTTATAACGCTGAGGG--AAATG
ACCTGATTCTTGTGAAGTTTCAGCTG-TAAGCAGGCTCTCTGTTGTTTCTGAAACTTCTCCAAGAACTCTGTTCACTCAG
TCTTATATATAGACAACTAGTAAATGATAA------CCTCACATTTGTGCAGTTAGATTTTCTGCATCTTTTTAGACATG
TTGCTTTATATTTGAACACGCTATTGTATACACAAAATTTATCC------------------------------------
---AGTACTTCTTATCTGCTGTATACAAAACAAAATACTATGCCAA---------------------TGTCATTTTTGCT
TGACCTATCGAAATATCTTTCGTTTTCTGTAGTGGAATTGTTTTTCTGACTACTC-------------------------
----------TGTTGTCAAGCAAGTTGATGCGTTACATGGGGCAATCACAAAAGAATCTGTAAACCT-----CTCTCAAG
TTTGAGTTATACTGAAACGTCAAGCATGTCAACCAGGGGCCATATAAATTATAAATATAATTTCGGTCCGGACAAGTTTG
ATAAGGAATTATAAATATGGTCACAATTTATGAACGTCAGAGCATGACTAAGATGATCACAATTAGTAAGTACGATACTA
ATCTAATACTTTTTTCTTTGCGGGTGGTACTAATCTAATACTTCATCCTCTAATGACATAGGTAGGCTGATAACGCTGCT
GAATCGCTGATGGAGTGGGCGTAGAACCTGAAAATCTGTAACCATTCGCTCCATGCGTAGCTTGGCATATTTATTCTGCT
TCTTGCTTCCTTCCATGGTATGTGACCACAACCACTGTGGGTGGCTTGCTGAGTTTGCTGGATGGATACGTCAGATTGTC
TGGGCCAAGATTGCAGTAAAGGCTTCATAGATCAGCCTAGCTTTGTTGGGCGT
>chr5A_1
GCTCTGCTCCCAAAGGAAGAAAGATATCGATCCATGCTTTCGAGATCGCCAACACAATTGTCAAGGCCTCCAATCTGATA
AAA-TCCTTCTCTAAAGAAAGAATAAGACACCTGAAAGAGGGCATGCTGAGGTCTGAAGGTGTCCGCCGTCTTATTTCGG
AAGATTACAGTCAGTTGTCCATTGTCATTGAAGACGACATACGGTAACATGATTTGCTGGACCTGGTTGTTTAGCAGTTT
ATATTTGTTGAAAAACCTTACATGCAT----TTGGTTGGAATTATGCAGAGAGGACGTGAGACAATTTTCGATAGAGGTT
GCCAGGTTTGGAGATCTGTGTGAAGATTGTCAATGGCACAATCTCAGTAGATATTTCTGCAGGTAAAACTTATCGCGGTT
GCCAGTTAATTCACTGTGGAGTCCATGTCTTCACCATGCCTCATCTTTATG-TGTTGTTTCTACATACAT------TGCT
CTTGCCAATGAACAGAGGTG--ATTCTCCACTGCCATCT---------AAGAACTTCAGTGAAGAGGTACCTCCCAGTAT
GAAGTATCTAATAAGATTGGCACAACACATCCGGGTTAGTATATACTCTTTTTTTTTTTT---GCACAGTCGTTACATCC
TTG---------------------------------------------------TGGAGAGATGTTTTCATCTGACAAAA
CACTGAGATTCCA-------TTTTCCATTTGTTCAGGTTCTACATGAAGAAATGCTAGCACTGGACAGACTTGAGCACGC
TTCTTGTACTACAAGCTAGCTAAGTCGTCACTTGCATTCAATGAGTCTCTTCTCCTTTCTAATTATACAACAAC----TA
TATGCAGATGTAGCGGCTATTCCTGCTAGGAAACAAATTGATGCTATCAAGAACCAAAGGGGTGCGGTGAAGGTCTTGAA
AAGCAAATCATTTTGGTCAAAGAGTATGGACAATGTAATAACCCCCGG--------TGACGATGATTTGCTATTAGTGTT
TCTTCATTCTAAGTCTAGTCATGGAATTGCCAATTATCCATGTTGTCTTGTTGCAGATTGTGGAGAAACTTGTGGAGATC
GTAGAATTCATGCATCTTCAAATCAACGAAGCTTTCTCGAAGAGTCATGCAAATGCAGAGCAATCATCTGGAGAACTTCA
CATAGCTATCAACCTCACGAAAACGTTAGGAGCTACTGGACTTGCGTTGCATTATGCTAATGTCATTTTGCAGCTAAAAG
CTTTGGTATGCCTCCCC-----------TGACATCAAGTTATATATCAGTAAATATTTTTTGAAAGAAACCACATGCATG
TT------------------------------------------------------------------------------
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----------------------------------------------------------------------TATTATGTAA
AGTTGGAAATTACTCCCTCCGTTTCTAAATATAAGACCTTTTAGAGATTTCAGTACGGACTACATATGGATGTATATACA
GTGGCGGAGCTACAACAAATAAGTTGGGCGGGCCAATTTTTTTTTTCTAAACCATACAGTTAAGTAGGCATGAGTTAGTG
AAATTTCAGGTTGCCTGTATAGGGAAACTGGTAACAGGATGATGTTGTCAAGTAAAATTTGGACAAATAAACGAAATTTC
TTGTGCGCTAGCTGCCTGCTGGTTCTATGGTCTTGTGCTCGTCGCCTGGGTAATTCATCGGTGGCTAGCCGCTGGCAGCC
GCCATGGCCACGCCCGTCGTGGCATAGGGATGGGTCACCGTAGGGGTTGCTACATGCGGCGCCCGACTGCCTAGCTATTG
GACCTCTACATCTCTGAGTGGCTTGCTCAGTGCTGAATCGGGGCAGAGAGCTCATAGCTGGATGCGAGGGAGACATGCTA
TTGGATTAAGCTGTTACATGTACAAAAGAGTTTTATTTGTCTCTGGAGCTGGGCGGGCCACGGCCTTGTTTTGCCCTCAC
GAAGCTCCGCCAGTGTGTATATAGACACATTTTAGAGTGTAGATTCACTCATTTTGCTCCATATATAATCTGTATTGGAA
TCTCTAAAAAGCCTTATATTTAGGAATGGAGGGAGTACAACAGAAGTTTATATAAT---AGTAATTGTGACACCAACTTG
AACACCGAAATTAAGGA--------TCCTTACAACAGAAGTTTCAGACAGGAGTAAAGCCAAGGCCAAAAAAC-------
------TACTATAGTGAAGCAATA-CAGCCGCAATATCTTCTCAATGCCTTATCTTCATCTGTATCCCTGCCCAAATGCC
TAACACAGCAACAAAGAACAAGCATGGAACACAATGTTATAAGGGGACCGGATCACTTTATGATCAGAACAGACTCCGCT
CCTTTTCCAAAGCATCTGTACAAAATATGTCCCCAAAAGGGAGATAAGCATGCATCCAAGCAAATTGTTGCCACAAATGA
TTAGGGTACATGAAGTTCCCGGGGGAGATCAACAACTTCCCAACCCACTTTCGCCGCCCCACAGACAAAGAACATGTGAT
GAACTGATTCCACACTATGCATAAACTTTTCATTCAGTGAAATTTGGCAAAGCTTTTGCCACTGTTTTTAATTTAAAGAG
AACACACACACACACACACACACACACACACACATATTGCATCCTGGAAAAGCTGCCACATGAAGAGCTTAGCATTCCAA
ATCAGGATGTGATGTAACCCTCTCCCCAGCCAATCATAGACTCTTGTTATGCTTTAATGAC-----TACATATCCCACTG
TCAGGCATTGGTATCACCGGTGGTTCCTCAAAATGACCGGGAGGCATTATACCAAGCACTGCCTCCTCAGATTAAGCCAG
TTTTGCATACCCAGCTGCGTAGT---------CCCGGCAGAGATCAGGTAAGTAGCACACCCTTTTTAGCAAACATAACG
TGTACA------AAATAGCAAATCCATACCTTGTCATCTCGGTTGCCTCTGCATCTTGTAGAACATGACGCGAGCAGGGG
TGAGAGCTGAAATGAACAGGGTACTGCGATGGCTTGTGCCAGCTGCCGAATCCACAAGGTACTTGATGCAAGT-------
-TAACAGAACAG----------------------CACTACTTTTAATAGTACTGCACAGATAACTAGACA---CTGGAAT
CTTGT---TCTTAACG--ATGTACGTTCCCGGTTAAATTTGTTGCCTTCTTGATGAATATCAGGCGGTACCACGTGAATG
GAGTATTTGGAGAATGGGAGATGAAAGGGTACGCAGCGCATAATAGATGTA-----------------------------
------------------------TATAAACTGCAATGTCCTGTCAGGCTCTC-----------ATGATTTAATTCA--C
TGTGTCAGGATTGAGGGTATCGATGTTGATGAAGCAAACTGGTTCGAACAAGAAAGTCGGATCAGTGTCAGTTACATGCT
CGCCCATGCAGATGCCAAAGTGAGCAAGGTAGAGACGCTCTACTACGCCAGCAAGGAGAGGACCGAAGGTTACATACTGG
ACCTTGTTCTGGCTCTTCATCGTCTTGTTTCGCCCG---CGGACTAGAAACGAGCCGACTATGAAGGCTCTGATAAACAA
TTGAG------ACAAGCACAACTTCAAGCATTTGAATGAACTTATCATCCAACCTACACCGTCGAAGCAACGAGGAGATG
TGGTGT--CCGTGGGTGCCTGATT------TTTCGCCCTTTTCAGATGCATCATACAATTCTAACGCTGA--G--AAATG
AGGCGATTCTTGTGAATTTTCAGCTTTTAAGCAGGCTCTCATTTGTTAATGAAGCTTTTGTGAGAACTCT----------
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>chr5B_1
GCTCTGCTCCCAAAGGAAGAAGGATATTGATCCAAGCTTTTGAGGTTGCCAACACAATTGTCATGGCCTCTAATCTGATA
AAA-TCCCTCTCTAAGCAAAGAATAAGGCACCTGAAAGAGGGCGTGCTTAGGTCGGAAGGTGTTCGCTGTCTTATTTTGG
AAGATTACAGTCAGCTGTCCCTTATCATTGAAGACGACATACGGTAACAGGATTTGCTGGGCCTGTCTGTTTAGCAGTTT
ATTTAA---GAAAAGTATTACATGCAT----TTTATTGGAATTATGCAGAGAAGAGTTGAGACGATTTTGTATAGAGGTT
GCCCGGTTTGGAGATCTGTGTGAAGATCCTCAATGGCACAATCTCGATAGGTATTTCTGTAGGTAAAACTTATCGCCGTT
ACCACTTAATTCACTTCGGAGTCCATGTATTCACCATAGCTCATCTTTTTTGTGTTCTGTGTACATA-ACATACATCGTT
C----------ACAGATGCG--GTTCTGCACTGACAGTGACATCTAAGAACAACTCCAGTGAAGAAGCACCTCCCAGTTT
GCAGTATCTGATAAAATTGGCACAAAATACATGGGTCAGTATTTCTTCTTGATAGAGAATTTTCTAAACCATGGTCGCAC
AGCTGTTTTCACCTGACAATCCAACTATATCTCTTCTTTGCACGCTCACATCCTTGTAGAGATGTTTTCAGCAGACAAAA
CACTGAAATTCCGTTTTCGCTTTTTCATGTGTTCAGGTTCTGCGCCAAGAAATGCTAGCACTGGACAGACTTGAGCACGC
TCATTGTACGACAAACCAT----TTTGTCACTCGCATTCGATGAGTCTCCTCTCCTTTCTAATTACACAGTAACC----A
TATGCAGATTTAGCAGCTGTTCCTGTTAAGAAACAAATTGATGCTATCAAGAGCCAAAGGGGTGCGGTGAAGGTCTTAAA
AAGGAAATCGCTATGGTCAAAGATTATGGAAGATGTAATAACCCG--------TGACGGCGATTATTTATGATTAGCATT
TCTTCAATCT-----AAGTCATGAAATTACCAATGATCCATGTTGTCTTGTTCCAGATTGTAGAGAAACTTGTAGGGATC
GTGGACTTCATCCATCTTGAGATCAACAGAGCTTTCTTGGAGAACCATGCC------GAGCAATCATCTGGAGAACTTCG
TGTGGCTAAAAACCTCGCCAGAACGTTAGGGCCTGCTGGACTCGCGTTGCATTACGCCAATGTCATTTTGCAGCTAAAAA
CTTTGGTATGTCTCCCTTTTCCCAGAGTTGGCATAAAGTTATATAG----------------------------------
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-------------------------------------------------------T---AGTAATTGTGACACCCGCTTG
AAAACCAAAATTAAGGA--------TCCTTACAGCAGAAAATTCAGAAAAGAGTAAAGCAGAGGCCAAAACACACATGAC
CAACATTACAACAACGAAGCAAAA-CAACCGCAGTAGAATTT--------------------------------------
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---------------------------------TCTTTGACTCTTATTATGCTTTAATGACATACATACATATTCCATTG
CCAGGCATTGACATCACCAGCGGTTCCTCAGAATGCTCGGGAGGCATTGTACCAAGCACTGCCTCCTAGGATCAAACCAG
TCCTGCATACCCAACTGCGGCGGCGTTTTCCCCTCAGAGAAAAGCAGGTAGGTAGCCAACTC-TTTCAGCAAACATTACA
TATAAAA----TAAATAGGGAATCCATCCCTTGTCATCTCGGCTCTATCTGCATCTTGTAGACCATGACGGTTGCAGAGG
TGAGAGCTGAAATGGACAGGGTATTGCGATGGCTTGTGCCAGCTGCGGAATCCACGAGGTAATTCGTGCAAGTTTTCAAG
TTAACAGAACAGCACTAC--------TTGAAGTACATTACTTTTAATCTTACCGCACAGATAGCTATAGATGTTCTACAG
AAAAAAAGTCTTAGTG--ATATATGTTCATGGCTCACCTGGCTTCCTTCTTGATGAGTATCAGGCTTTACC---------
------TCGGAGAATGGGCGAGGAGAGGGTACGCACCCTGTAAATCTGTAATCGTCC----GACCGCTCGTCTCGTTTCT
GTGTTTGCTCATGC--AACAGACGTATAAACTGCAATTCTCTGGCAGGCTGTCCC--ATTTCTCATGAATC-AATCT--C
TTTTACAGGATGGAGTGTGTCGATGCCGACGAAGCGAACTGGTTCAAACAAGACAGTCATATCAGCGTCAGTTCCATGCT
TGCTCATGCAGACGCCAAAGTGAGCAAGGTAGAGACGCTGTACTACGCCGACAAGGAGACGACCGAAGGTTACATAGCGG
AGCTTGTTCTGGCTCTTCATCTTCTTGTTTCGCCTACTGTCGAGAAATAATGAGTCCAAGATGAAGGCACTGATGAAAAA
TTGATATCAATATGAGCACAACTTGAAGCCTCTACATTAACTTATC---CAATCTATGCTGTCGAAGCAATGAGGGGATA
AGGCAG--CCCCGGATGCCTGATTTTTCGGTTTCGGCCTCTTCAGATGCGTCAAACAGTTGTAACGCCGA--GGGAGATG
AGACGATTCTTGTGAAGTTTCAGTTTTTAAGCAGGCTCTCGGTTGTCTCTGAGACTTATCCAAGAACTCTGTTCGCTCGG
TCTTGTGTATAATCGGCAACTAAATGGTAACCTCATCCTCACATTTGTGCAGTTTGGTTCTCTACATCTGCCTACATATT
TTGTTTTAGATTTTTA-ACACTCTTCTATACACAAACTTTATCTGT----------------------------------
-----TATTTGTGATCTATTGTACTATAAAAAAAATACTATGACAA----------------------------------
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>chr5D_1
GCTCTGCTCCCAAAGGAAGAAGGATATTGATCCAAGCTTTTGAGGTTGCCAACACAATTGTCATGGCCTCTAATCTGATA
AAA-TCCCTCTCTAAACAAAGAATAAGGCACCTGAAAGAGGGTGTGCTTAGGTCGGAAGGTGTTCGCTGTCTTATTTCGG
AAGATTACAGTCAGCTGTCCATTCTCATTGAAGATGAAATACGGTAACAGGATTTGCCGGGCCTGTCTGTTTAGCAGTTT
ATTTAA---GAAAAATATTACATGTAT----TTTATTGGAATTATGCAGAGAAGAGTTGAGACGATTTTGTAAAGAGGTT
GCCCGGTTTGGAGATCTGTGTGAAGATCCTCAATGGCACAATCTCGATAGGTATTTCCGCAGGTAAAACTTATCGTCATT
ACCACTTAATTCACTTCGGAGTCCATGTATTCACCATAGCTCATCTTTTTG-TGTTCTGTGTACATA-AT------TGTT
CTTGTCAATGAACAGA--TG--GTTCTGCACTGACAGTGACATCTAAGAACAACTCCAGTGAAGAAGCACCTCCCAGTTT
GCAGTATCTGATAAAATTGGCACAAAATACATGGGTCAGTATTTCTTCCTGAGAGAGAATTTTCTAAACCATGGTCGCAC
AGCTGTTTTCCCCTTACAAACCAATTATGTCTCTTCTTTGCACGCTCACATCCTTGTACAGATATTTTCAGCAGACAAAA
CACTGAAATTCCGTTTTCGCTTTTCCATGTGTTCAGGTTCTGCGCCAAGAAATGCTAGCACTGGACAGACTTGAGCACGC
TCATTGTACGACAAACCAT----TTCATCACTCGCATTCAATGAGTCTCCTCTTCTTTCTAACTACACAGTAACTATATA
TATGCAGATGTAGCAGCTAGTCCTGTTAAGAAACAAATTGATGCTGTCAAGAGCCAAAGGGGTGCGGTGAAGGTCTTAAA
AAGGAAATCACTCTGGTCGAAGAGTATGGAAGATGTAATAACCCG--------TAATGATGATGACTTACGGTTAGTGTC
TCTTCAATCT-----AGGTCATGAAATTACCAATGATCCATGTTTTCTTGTTGCAGATTGTAGAGAGACTTGTAGAGATC
GTGAGCTTCATCCATCTTGAGATCAACAGAGCTTTCTTGGAGAACCATGCC------GAGCAATCATCTGGAGAACTTCG
TGTGGCTAAAAACCTCGCGAAAACGTTAGGGCCTGCTGGACTCGCGTTGCATTACGCCAATGTCATTTTGCAGCTAGAAA
CTTTGGTATGTCTCCGTTTTCCCAGACTTGACATCAAGTTATATAG----------------------------------
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-------------------------------------------------------T---AGTAACTGTGACACCCGCTTG
AAAACCAAAATTAAGGA--------TCCTTACAGCAGAAAATTCAGAC--GAGTAAAGCAGAGGCCAAAACACACATGAC
CAACATTACACCAACGAAGC-AAAACAACCGCAGTAGAAATT--------------------------------------
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---------------------------------TCGTTGACTCTTGTTATGCTTTAATGACATACATACATATCCCATTG
GCAGGCATTGGCATCACCAGCGGTTCCTCAGAATGCTCGGAAGGCGTTATACCAAGCACTGCCTCCTCGGATCAAACCAA
TCCTGCATACCCAACTGCGGCGGGGTTTTCCCCTCGGAGAAAAACAGGTAGGTAGCTAACTC-TTTCAGCAAACATTACA
TATAAAATAGCTAAATAGGGAATCCATCCCTTGTCATCTCGGCTCTATCTGCATCTTGTAGACCATGACGGTAGCAGAGG
TGAGAGCTGAAATGGACAGGGTATTGCGATGGCTTGTGCCAGCTGCGGAATCCACGAGGTACTTCGTGCAAGTGCTCCAG
TGAACAGAACACAACTAC--------TGGAAGTACATTACTTCTAATATTACTGCACATATAGCTATAGATGTTGGAAAA
ATTGT---TCTTAGTG--ATATATGTTCATGGCTCACCTGGCTGCCTTCTTGATGTGTATCAGGTTTTACC---------
------TTGCGGAATGGGCGATGAAAGGGTACGTACCGTATAAT------------CATCCGACAGCTCATCTCGTTTGC
GCGTTTGCTCATGC--AACAGATGTATAAACTGCAATGTTCTGG--------CCCTGATTTCTCATGAACC-AAATCTCC
TTTTACAGGACGGAGTGTGTTGATATCGACGAAGCGAACTGGTTCGAACGAGACAGTCGTATCAGCGTCGGTTCCATGCT
CGCTCATGCAGACGCCAAAGTGAGCAAGGTAGAGACGCTGTACTACGCAAACAAGGAGACGACCGAAGGTTACATAGCGG
AGCTTGTTCTGGCTCTTCATCTTCTTGTTTCGCTGCCTACGGACGAGAAATAAGTCCAAGATGAAGGTGCTGATGAACAG
T---------------------------------------------------------------------TGAGGTGATA
AGGCAG--CCCCGGATGCTTGATTTTTCGGTCTTGCCCTCTTCAGATGCGTCAAACAGTTGTAACGCCGA--GGGAAATG
AGACGATTCTTGTGAAGTTTCAGTTTTTAAGCAGGCTCTCGGTTGTCTCTGAGACTTACCCAAGAACTCTGTTCGCTCGG
TCTTGTATATG-TCGGCAACTAAATGGTAA------CCTCACATTTGTGCAGTTTGGTTCTCTGCATCTGCCTACATATT
TTGTTTTAGATTTTTA-GCACTCTTCTATACACAAACTTTATCTGTTACTCCCTCCGCCATAATATAAGAATGGGACGGA
GGGAGTATTTGTGATCTGTTGT---ATAAAAAAAATACTATGACAAGTAACCTTGGCGAGTAAACGTTGTCGTTTTTGCT
CGGCCTGTTGAAATTTAATC--TTTTATGTGTTGGAATTATTTTTGTGACTACTTTTTTTTTTGAGGGGTAGTAGCTTTT
GCGACTACTTTGTTGTCAAGCAAGTTGATGCGTTACATGGGGCATATACAAAAAAATAATATGTATTTAAGCCTCTCAAG
CTTGAGTTGTACTGAAAATCTGCAACC-----------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------ATCCATGCACGCCGTGGTCTGCTTGGCATATTTAATCTTC-
---TGCTTCCTTCCATGGTATGTGACCACGACCACTATGGGCGGCTTGCTGAGTTTGCTGGATGGATACGTCAGATTGTC
TGGGCCAAGATTGCAGTAAAGGCGTCAT-------------------------
>chr5D_1
GCTCTGCTCCCAAAGGAAGAAAGATATCGATCCACGCTTTCGAGATTGCCAACACAATTGTCAAGGCCTCCAATCTGATA
AAAATCCTTCTCTAAACAAAGAATAAGGCATCTGAAAGAGGGTGTGCTAAGGTCTGAAGGTGTTTGCCGTCTTATTTCGG
AAGATTACAGTCAGTTGTCCATTCTCATTGAAGACGACATACGGTAACATAATTTGCTGGACCTGTTTGTTTAGCAGTTT
ATATTTGTTGAAAAACCTTACATGAAT----TTGGTTGGAATTATGCAGAGAGGACTTGAGACGATTTTCGATAGAGGTT
GCCAGGTTTGGAGATCTGTGTGAAGATCGTCAATGGCACGATCTCAGTAGATATTTCTCAAGGTAAAACTTATCGCGGTT
GCCACTTAATTCACTGTGGAGTCCATGTCTTCACCATGCCTCATCTTTATT-TGTTGCTTCTACATACAT------TGCT
CTTGCCAATGAACAGAGCTG--ATTCTCCACTGCCATCT---------AAGAACTCCAGTGAAGAGGTACCTCCCAGTAT
GAAGTATCTAATAAGATTAGCACAACACACGCGGGTTAGTATATACTCTTTTTTTTTTTTTTTGCACAGTCGTTACATCC
TTG---------------------------------------------------TGGAGAGATGTTTTCATCTGACAAAA
CACTGAGATTCCA-------TTTTCCATTTGTTCAGGTTCTACATGAAGAAATGCTAGCACTGGACAGACTTGAGCACGC
TTATTGTACTACAAACTAGCTAGTTCGTCACTTGCATTCAATGAGTCTCTTCTCCTCTCTAATTATACAACAAC----TA
TATGCAGATGTAGCGGCTATTCCTGTTAGGAAACAAATTGATGCTATCAAGAACCAAAGGGGTGCGGTGAAGGTCTTAAA
ATGCAAATCGCTTTGGTCAAAGAGTATGGACGATGTAATAACCCC--------------TGATTACTTACTATTAGTGTT
TCTTCAATCTAAGTCAAGTCATGGAATTACCAATGATCCATGTTGTCTTATTGCAGATTGTGGAGAAACTTGTGGAGATT
GTAGACTTCATGCGCCTTCAAATCAACGAAGCTTTCTGGAAGAGCCATGCAGATGCAAAGCAATCATCTGGAGAACTTCA
CATAGCTATCAACCTCATGAAAACGTTAGGGGCTACTGGACTTGCGTTGCATTATGCTGATGTCATTCTGCAGCTAAAAG
CTTTGGTATGCCTCCGCCA-----------ACATCAAGTTATATAGCAGTTTTC---TTTTTAAGGAAACCACATGCTTA
TCTGTACCACTATATAGTGTGTGAATAAGTTTGAATATGGATCGTTGGATGAACTTAATCCGACGGTCAAGAGGTGGCAA
ATCCGAGCGTTGCTGACCATTTGATTTCTTATCAATTACATCAGATTCCGCCATGTGTACTTTCTAGAAGTTTCCAATAA
TTAAAAACTTAGTCCACCCTTGTACATGTCACATATACTATCTTTACACCCTTCTCATTTATGCTAGAACCTACCATGCA
TGATCTTGCTCCATTAGAGTTTTCATTTATGATTTGGTCTAGAATCTTCTGTCTATGCTCTTGCTCCATTAGAGTTCTCG
CTTGAATAAAAGTGTATCCATTTATGAGATTATTTGTGAACTTTTACTCATAGTGAAAGACTTCTCATGAACTATTTCTT
ACAGTCCATATATCTTTTCAGAGAATTTCAACGAAATGCCACAACACTATCTTTGCATATTCATGAATTTAACCTTAAGG
TCCATACATGTAATGCGCTATATATTGGAACACTATGCAGCTAAGGTTTTCCTTTTTTCAGTGACGTAATATGTAAGTGT
CAGTTGTATGTCAACATTGTGTTGTAACGATATCTCACAACTCACGTGCAAAGCACGTGCAACTCAGTAGTATTATATAA
AGTTGAAAATC---------------------------------------------------------------------
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------------------------------------ACAACAGAAGTTTATTATATGGCAGTAATTGTGACACCAACTTG
AACATCGAAACTAAGGA--------TCCT-ACAACAGAAGTTTCAA----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AACAGATTCTGCT
CCTTTTCCAAAGCAGCTGTGTAAAATC-----------------TAAGCATGCATCCGAG-AAATTGTTGCCACAAAGGA
TTAGGGTACATGAAGTTC---------------AACTCCCCAAACCACTTTCACCGCCCCACAACCAAAGAACATATGAT
GAACTGATTCCACATTATTCATAAACTCCTTATTCAGTAAAATTTGGCAAAGCTTTTGTCACTGTAAAGAAA--------
-----------------------ACACACACAGAAATTGCATCCTGGAAAAGTTGTCACATGAAGAGCTTAGCATTCCAA
ATCCAGATGTGATGTAACCCTCTCCCCAACCAATCATAGACTCTTGTTATGTGTTAATGAC-----TACATATCCCACTG
TCAGGCATTGGCATCACCGGCGGTTCCTCAAAATGCGGGGGAGGCATTATACCAAGCACTGCCTCCTGGGATTAAGCCAG
TTCTGCGCACCCAGCTGCGTATT---------CCGGACAAAGATCAGGTAAGTCCAACACCCTTTTAAGCAAACATAACC
TGTATA------AAATAGTGAATCCATCCCTTGTCATCTCGGTTGCATCTGCATCTTGCAGACCATGACGCGAGCAGCGG
TGAGAGCTGAAATGAACAGAGTATTGCGATGGCTTGTGCCAGCTGCGGAATCCACCAGGTACTTCCTGCAAGT-------
-TAACAAAACAC----------------------CACTACTTTTAATAGTACTGCACAGATAGCTAGATG---TGGATAT
CTTTT---TCTTAATG--ATATAC--TCTCGGTTCACTCTGTTGCCTTCTTGATGAATACCAGGCGGTACCACGTGAATG
GGGTATTCGGAGAATGGGAGATGAAAGGGTATGTAGCGTATAAT------------C----GCCTGCTCGTCTTGTTTCT
ACCTTTTTCTCATGCAAATAGATACATAAACTGCAATGTCCTATCAGGCTCCC-----------ATGACTTAATTCGCTG
TA--TCAGGATTGAGGGTATCGATGTCAACGAAGCAAACTGGCTCGAACAAGAAAGTCGGATCAGTGTCAGTTACATGCT
CGCCCATGCAGATGCCAAAGTGAGCAAGGTAGAGACGCTCTACTACGCCGACAAGGAGAGGGCCGAAGGTTACATACTGG
ACCTTGTTCTGGCTCTTCATCGTCTTGTTTCGCCCG---CGGACTAGAAACAAGCCGAATATGAAGGCACTGACAAACAA
CTGAG------ATGAGCACAACTTCAAGCTTTTGGATGAACTTATCGCCCAACCTATGCTATCGAAGCAACTAGGAGATG
AGGTGT--CTGTGGGTGCCTGATT------TTTTGCCCTTTTCAGTTGTGTCAAACAGTTCTAACGCTGA--GGGCAATG
AACCAATTCTTGTGAAATTTCATCTTTTAAGCAGGCTCTCAGTTGTTTATGAAACTT-TGTGAGAACTCT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
-----------------------S------------------------------------S--S--------S---S---
------------S-----------------------------------------------------------------S-
------------S-------------S----------S-----------------S------------------------
---------------------------SSSS--------------------------------S-S--------------
------S------------------SS-----------------------------------------------------
---------------------------------------------------------------------------S----
--------------------SS----------------------------------------------------------
-----------------------------------------------------------S-------------------S
-------------------S---S--------S--------S----S---------------------------------
---------S--------S-----------------------------------------------------------S-
--------------------------------S-----------------------------------S-----------
-----------S--------------------------------------------------------------------
------------------------------------------S-SS-SSSSSS---S---------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--S---------------------SSS--SSS-SSSSSSS------------------
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----------------------------------------------------------------------S--------S
--SS-------------SSSSSSSS---------------------------------------S---------------
-------------------------S-------S----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------S----------S---------------
-----------------------------------------S---S----------------------------------
-----------------------------------------------------S--------------------------
---S----------------------S------------S----------------------------------------
----------------------------S-----------------S--------------------S---S--------
-----S------------SSSSSSSS--------------------S-S--S--------S-------------------
---------------SSS-------------------------------------S------------S-----------
--------SS-------------------------S-----------------------------S--------------
-----------------------------S-----------------------------S--------------------
---------------------S-----------S-------------------S-S----S-------------------
--------------------------------------------------------------------------------
-------------------------------------------------S----------S-------------------
-----------S-------------------------------------S------------------------------
------SS--S-------------------------------------------------S---------SS--------
-S-S---------------------S--------------S----------------S----------------S---S-
----S------SS-SS-S-S------S---------------------------S-S--S---------SSS--S-S--S
---S----S----SS-S--S--S--S----------S------S------------------------------------
-------S--S-S-----S----SSSS---S-----------S----------------------------S--------
S-S---S-S-----S-SS-SSS----S---SS-------S-----S--------S-------------------------
--------------------------------------------SSS------S---SSSSSSSSS--------------
S-------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S----S-S-S--S--SSSS--------------S---S-S
SSS--------------------------S------S----S--------------------------------------
-----------------------S----SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TTGTATAGAGGTT
GCCCGGC-------------------------------------------------------------------------
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>reverse_3906
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-----------------------------------------------------------------ACTCGTCTCGTTTCT
GCGTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_687
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---------------------------TGTCTTTTCTTTGCGCGCTT---------------------------------
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>reverse_3950
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-----------------------------GCTGCAATGTTCTGTCAGGC-------------------------------
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-----------------------------------------------------
>forward_3816
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------------------------------------CCTGGTTGCCTTCTTGATGC------------------------
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>reverse_5100
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-----------------------------------------------------------AGGTAGGCTGATAACGCTGC-
--------------------------------------------------------------------------------
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-----------------------------------------------------
