>input_sequence_61565
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------------------------------------------------------CGCCACGGTTACTCTGCAGAACCAAA
GCAGCAGCATACCAAAGACCCAGAGAATCAAGAGGAGATGCTTGCTCTTCACACCGTTCGGACATCCCTTCCCTCGCCGC
GCAGATCCTCCCCGCGCCGACATGCACTGCATCTAAGCAAGAGGAG---ATTTTCCATCTGTGCTTGCAGTTCCGAAGAT
GCCGGATCCGACGGTCCCCTGCCGCACGGCGGTGACCAGCGCCAGCAGGAGGTGCTTGCGAAAATCGCCATGCTTCAGAC
GCAGAAGGTCCGCATCACAAACTTCCTGGATGAGCGGTCTGCTTACCTGACCAAGTTCACCAAGGACGCCGACACCGAGT
TCGACATGATTGGGCAGAACGCCATGAAAGAGCTCGATCAAATTGGGGACCAGGTGAGCATCCCTTGCGATGGATGG-TT
AAACAGTATAATA---CTTCATTCAGTGTCTGACAGAGAATTGCATTT--GATGTGGTAGATAATGGAGCGACTCGACAG
CAAGATGCAGTCCTACGAGGAGACAGCTGAAATGCAAAGGCAGGAGATAGAAATGAACGAGAGGGTGTTAGAAGATTTCG
AAGACTGGATCGAAGAGGAGAAAAACGAAGGCATGTTCTTCAAAAGCCTTGGCAAGGTCAAAAAACCTCAAAACAATGAG
GAAATCAAGGTGAAGGCCAAGATTGAAGCACAGAAGGTCAGAGAGATTGCAGAGGAGAGTGCGGGGTCAAAAGCTCGGAT
GAATATTTACCTTGCACTGACGGCGATACTCGGTCTTACAATCGCAAATGCCGTCTTTGCAACGCCAGAGGTGGAATGGA
GGAAGGTTGCTGCTCTGGGTCTAATTTTCATTGGCCTGGTTGCTCAGGTAATCTATGAGCAAGATATATCCCCACCGGTA
GCTGACAAGGATGAAAAAAGAGAAGAATGAAAGAGCTGTGCACCCTGAGTGAAACATCAAAAAGCAGCAAGAGCTTCATC
GATATAGACGTAGACTGTATAAATTCAAGATATAGATTGTGTAATCTTAGTTATCATTTAAGGTGTAGCTTGGCCTATAA
ACCACAGGTTTCTTA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr3A_1_TraesCS3A01G367400
GGGCAGGCGGAAGGGTACAGCTCATGAGCACTCAGACGCGTAACTCCACTCTGGGAATTCGCTCGAGGAAAGTAACTGCG
TGATGTGGATTATTCGGAGAGAGAAGTTATGGCACTAAAAGTCTCAAGGACGGCATCTTCTTCAGTACTCGCTCGATTGC
CTCATTGATGCAAGCATACTT-----------GTGACCCAGTACGGACGAGGTTCCCAGCTTAATGGGCAGATTAAAAGG
CACCATCAACCAGCAGCAGCTCCCGTTTCCATTTCACAGGTGAAT---------GCGAGAACGCACTGCTGATGGTTAGC
TGCTCGAAGCATTTCCAGTCCATAATTGCAGAATAGTAAAGAGGACGAAAACAAATCACACATGTGGTCGTTTGTGTTGT
CCCGTGCAAATCTCTGAGAGAGCATCGTATAGATATAGCTAGATGTCTAAGGATGGATGCTGTCGTTTTTGGTGCTGCAG
ATTGTTGCATCAGTTAA------------------GTCGGCTGGATCATGTAT---------------------------
-----GTGGCCCATTCTATCCGGAAAAAAAAAACTCCAAACGACCACATGGACTCATCTTTTTTTTTTGAGGGGTAGATT
GATTCATCAACTAATAATTCGTGTCTGTGGACATGGCCATAGT--------------TTCGTAGGGCGAATGATAAGTTG
TAGTAGGTGGCCATTCATTGTAGGCTAGCCCAGCTCTTCGTTGTACAACAAAAAAACACAAGTAGGCGCGGCCCAGCTAG
CACCTCTATTTCAGCCCAGTTCATGATTGCACGGCAGCTAGTGGGGATCCATTGATTGATTGATTGATTTCACGGTGGCT
ACACACAGAGCACTACTTG----------GCTCAATGGATAGGAACCGAAACGAGGCAGGGCCCCATTCCCCGGGAAAGT
GGCATGGGTTGAAATGGACCTGAGTGAACACGCAGCACGCAAGGGGCAACTTGGTCTTGTCATGTAGCACAGCAGCGTGG
CTCCGTGGATATCGTTCCCAGGCTCCAGGCAACGAGAGGTGCAGAAACAAACTCCGCCACGGTTACTCTGCAGAACCAAA
GCAGCAGCATACCAAAGACCCAGAGAATCAAGAGGAGATGCTTGCTCTTCACACCGTTCGGACATCCCTTCCCTCGCCGC
GCAGATCCTCCCCGCGCCGACATGCACTGCATCTAAGCAAGAGGAG---ATTTTCCATCTGTGCTTGCAGTTCCGAAGAT
GCCGGATCCGACGGTCCCCTGCCGCACGGCGGTGACCAGCGCCAGCAGGAGGTGCTTGCGAAAATCGCCATGCTTCAGAC
GCAGAAGGTCCGCATCACAAACTTCCTGGATGAGCGGTCTGCTTACCTGACCAAGTTCACCAAGGACGCCGACACCGAGT
TCGACATGATTGGGCAGAACGCCATGAAAGAGCTCGATCAAATTGGGGACCAGGTGAGCATCCCTTGCGATGGATGG-TT
AAACAGTATAATA---CTTCATTCAGTGTCTGACAGAGAATTGCATTT--GATGTGGTAGATAATGGAGCGACTCGACAG
CAAGATGCAGTCCTACGAGGAGACAGCTGAAATGCAAAGGCAGGAGATAGAAATGAACGAGAGGGTGTTAGAAGATTTCG
AAGACTGGATCGAAGAGGAGAAAAACGAAGGCATGTTCTTCAAAAGCCTTGGCAAGGTCAAAAAACCTCAAAACAATGAG
GAAATCAAGGTGAAGGCCAAGATTGAAGCACAGAAGGTCAGAGAGATTGCAGAGGAGAGTGCGGGGTCAAAAGCTCGGAT
GAATATTTACCTTGCACTGACGGCGATACTCGGTCTTACAATCGCAAATGCCGTCTTTGCAACGCCAGAGGTGGAATGGA
GGAAGGTTGCTGCTCTGGGTCTAATTTTCATTGGCCTGGTTGCTCAGGTAATCTATGAGCAAGATATATCCCCACCGGTA
GCTGACAAGGATGAAAAAAGAGAAGAATGAAAGAGCTGTGCACCCTGAGTGAAACATCAAAAAGCAGCAAGAGCTTCATC
GATATAGACGTAGACTGTATAAATTCAAGATATAGATTGTGTAATCTTAGTTATCATTTAAGGTGTAGCTTGGCCTATAA
ACCACAGGTTTCTTACACCTGAGGTCTGATAAACTCAAGCTGTGTTCAATCTTGCATCAAAGATATGTTTCAGCAATATA
ACTTTCAAAGCCAAAACCATGTAACGAAGTTACAATTTTGATGCACACAACACGTCAAGTTACTCAAATTTCAATTAAAA
GAGGTTAAGAGTATTAGAAGAGATAACAAAAGAGA-GTGCAGGATCAACGCTCAAATGAGCATTTACCTTGGACTGGTAC
CAATGCT--------CAGTCTTACATTTCCAGGACCAGATGCTGCCTTTGCAACAACTGGGTAGAGTGACA-GAAGGTTG
CTGCTCTGGGTTAATTTGTTGATCGCCTGGTTGCTCAAGCCATCCACGAGAAGGACATATCAGCACCAGAAGCTCAGAAA
AAAAGAAGAAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----AATGAAGATCTGTGTACTTGAGGGTTC-------AAGGGTAGAAAGTTTAAGTAGCACTGGAGTTCAGTTAATAT
AGTTAGTACCAATATACAAGTGCATAAAATTGACACGAATGTACTATGTAGTTTTACAGATCAAAGATACCATTTCTGGT
ATAGCTTAGTGTATAAACACAGAATTCCAA--------------------------------------------------
---------------------------------------------------------------------------ATGCA
CAGAATTCATGTTTCACAAATTTTGATTGAAAGAGAGTA--------TCAAAC-----------------------TTCA
AAAATGGATAATCAAGAAAATATACAATATCAGAAGAAGATAATTCT--------------------TGGTGAAGGAGAT
GGG--GATAAAGTTATGGGAGGCCATTCTCTGCTGAGTA-----------------------------------------
---------------------------------------------------------------TCATGTTAACTGGAAGA
CTATGTGTTGACCTTGAAAAATCC-----------------AGGCAGTTATGGTATTCATGAACAGATTGAGAAAGGCCA
TGGTCGG---AAAAAGGTAAACTGCCACAACTA------------------------------CACATTAGTTCAACAGT
GATGACTACAAGATGGAGATCTAGTTCTCAAGATGAATACAAATAGAAGCACATTTACTGCTGAACAAAAAAACAGAACA
GGGGAAAAGGGATAGAAACCAACAACTAGATG-ATGCTAACATGAAATTCGCAACAACTGACAATTTTGAAGAGCTAGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3B_1
GGGCGGACGGAAGGGTACAGCTCATGAGCACTCAGACGCGTAACTCTACTCTGGGAATTTGCTCGACAAAAGTAACTGCT
TGATGTGGATTACTCGGAGAGAGAAGTTCTGGCATTAAAAGTTTCAAGGACAGCATCTTCTTCAGCTCTTGCTCGATTGC
CTCATTGATGCAACCGATAGCTGTGGAATAGCGGGACCAAGTACGGATAAGGTTCCAAGCTTGATGGGCAGATTAAAAAG
CACCATCCAC---CAGCAGCTCCCGTTTCCATTTCACAGGTGAAT---------GCGAGAACGCACTACTGGTAGTTAGG
TGCTCAAAGCATTTTCAGTCTATAATTGCAGAATAAATAAAAAGGATGAAACAAATCACACATGTGGTCGTTTGTGTTGT
CCCGTGCAAATTTCT--GAGAGCATCGTGTAGGTATATCTAGATA--TAAGGATGTATGCTGTCGTTTTTGGTGCTGCAG
TTTGTTGCATCAGTTAAGTGTATAGTTGTCGAGTTGTCGGCTGGATGATGTATAACTCGATTTTCGTAAGGAAAATGGGG
GCCGTGTGGCCCCTTCTATCGA-AAAAATTTAACTCCAAGAGGCCACATG------------------------------
GATTCATCAACTAATAATTCGTGTCTGTGGAACATGGCCG-------------TAGCTTCGTAGGGCGAATGATAAGTTG
TA---GGTGGCCATTCATTGTAGGCTAGCCCAGCTCTTCGTTGTAGTAC--AAAAAAACAAGTAGGCGCGGCCCAGCTAG
CAGCTATATTTCAGCCCAGTTCATGATTGCACGGCTGCTAGTGGGGCTCCATC------------AATTTCACGGTGGCT
ACACACAGAGCACTACTTG----------GCTCAATGGATAGGAACCAAAACGAGGCAGGGTCCCATTCCCCGGGAAAGT
GGCATGGGTTGAAATGGACCTGAGTGAACACGCAGCACGCAAGGGGCAACTTGGTCTTGTCATGTAGCACAGCAGCATGG
CTTCGTGGATATCGTTCCCAG-CTCCAGGCAACGAGAGGTGCAGAAACAAACTCCGCCACGGTTATTCTGCAGACCAAAA
GCAGCAGCATACCAAAGACCCAGAGAATCAAGAGGAGATGCTTACTCTTCACACCGTTCAGACATCCCTTCCCTCGCCGC
GCAGATCCTCTCTGCGCCAACATGCCCTGCAACTAAGCA---GGAG---ATTTTCCATCTGTAAGAGCAGCTCCGAAGAT
GCTGGATCCGATGCTCCCCTGCCGCACGGCGGTGACCAACGCCAGCAGGAGGTGCTTGCGAAAATCGCCATGCTTCAGAC
GCAGAAGGTCCGCATCACAAACTTCCTGGATGAGCGGTCTGCTTACCTGACCAAGTTCACCAAGGACGCCGACACCGAGT
TTGATATGATTGGGCAGAACGCCATGAAAGAGCTCGATCAAATTGGGGACCAGGTGAGCATCCCTTGTCATGGACGGATT
AAACAGTATATTGCTTCTTCATTTAGTGTCTGACAGAGAATTGCATTTCTGATGTGGTAGATAATGGAGCGTCTTGACAG
CAAGATGCAGTCCTACGAGGAGACAGCTGAAATGCAAAGGCAGGAGATAGAAATGAACGAGAGGGTGTTAGAAGACTTCG
AAGATTGGATTGAAGAGGAGAAAAACGAAGGCATGTTCTTCAAAAGCCTTGGGAAGGTCCAAAAACCTCAAAACAATGAG
GAAATCAAGGTGAAGGCTAGGATCGAAGCACAGAAGGTCACAGAGATAACAAAGGAGAGTGCAGGGTCAAAAGCTCGGAT
GAATATTTACCTTGCACTGATGGCGATACTCAGTCTTACAATCGCAAATGCCGTCTTTGCAACGCCAGAGGTGGAATGGA
GGAAGGTTGCTGCTCTGGGTTTAATTTTCATTGGCCTGGTTGCTCAGGTCATCTATGAGAAAGATATATCCCCACCAGCA
GCTGACAAGAATGAAAAAAGAGAAGAATGAAAGAGCTGTGCACC--GAGTGAAACATCAAAAAGCAGCAAGAGCTTCATC
GATATAGATGTAGGCTGTATAAAATCAAGATATAGATTGTGTAATCTTAGTTATCATTTAAGGTGTAGCTTGGCCTATAA
ACCACAGGTTTCTTACACCTGAGGTCTGATAAACTCAAGCTGTCTTCAATCTTGCATCAAAGATATGTTTCAGCAATGTA
ACCTTCAAAGCCAAACCAATGTAACAAAGTTACAATTTTGATGCACCCAACACGTCAACTTACTCAAATTTTGATTCGAA
GAGGTTAAGAGTAT-AGAAGACA--GCAAAAGAGAAGTGCAGGGTCAATGCCCAAATGAGCATTTACCTTGGGCTGGTGC
CATTGCCAATGCCTTAAGTCTTACATTT------CCAGATGCTGCCTTTGAAACAACTGGGTAGAGTGACA-GAAGGTTG
CTGCTCTGGGTTAATTTTTTGATCGCCTGGTTGCTCAAGCCATCCACGAGAAGGACATATCAGCACCAGAAGCTGAG--A
AAAAAAAAAAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----AATGAAGGTCTGTGCACTTGAGGGTTA-------AAGGGTAGAAAGTTTAAGTAGCACTGCAGTTCAGTTAATAT
A------ACCAAGATAAAAGTGCATAAAATTGACATGAATGTACTATGTAGTTTTACAGATCAAGGATACCATTTATGGT
ATAGCTTAGCGTATAAACACAGAATTCCAA--------------------------------------------------
---------------------------------------------------------------------------ATGCA
--------------CACAAATTTTGATTGAAAGAGAGTA--------TCAAACTATTGTTAAATAAAAAGCACAAGTTCA
AAAATGGATAATCAAGAAAATATACAATATTAGAAGAAGATAATTCT--------------------TGGTGAAGGAGAT
GGG--GATAAAGTTATGGGAGGCCATTCTCTGCTGAGTACTCCCTCCGTCCGAAAAAGCTTGTCCCTCAAATGGATGTAT
CTATACTAACTTGGTACTAGATACATCCATTTGAGGGACAAGCTTTTTCGGACGGAGGGAGTATCATGTTAACTGGAAGA
CTATGTGTTGACCTTGAAAAATCC-----------------AGGCAGTTATGGTATTCATGAACAGATTGAAAAAGGACA
TGGTCCGGAAAAAAAAGTAAACTGCCACAACTA------------------------------CACATTAGTTCAACAGT
GATGACTACAAGATGGAGATCTAGTTCTCAAGATGAATACAAATAGAAGCACATTTACTGCTGAACAAAA--ACAGAACA
GGGGAAAAGGGATAGAAACCAACAACTAGATGGATGCTAACATGAAATTCGCAACATCTGACAATTTTGAAGAGCTAGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3D_1
GGGCGGACGGAAGGGTACAGCTCATGAGCACTCAGACGCGTAACTCTACTCCGGGAATTTGCTCGAGAAAAGTAACTGCG
TGATGTGGATTACCCGGAGAGAGAAGTTCTGGCATTAAAAGTCTCAAGGACGGCATCTTCTTCAGTTCTTGCTCGATTGC
CTCATTGATGCAAGCGATAGTTGTGGAATAGCGGGACCAAGTACGGATAAGGCTCCAAGCTTAATGGGCAGATTAAAAAG
CACCATCAAC---CAGCAGCTCCCGTTTCCATTTCACAGGTGAATAAAAAGCTTGCGAGAACGCACTACCGACGGTTAGG
TGCTCGAAGCATTTTCAGTCTATAATTGCAGAATAAAAAAAGAT--GAAAACAAATCACACATGTGGTCGTTTGTGTTGT
CCCGTGCTAATTTCTAAGAGAGCATCATGTAGAC------------CTAAGGATGTATGCTGTCGTTTTTGGTGCTGCAG
TTTGTTGCATCGGTTGAGTGTATA------GAGTTGTCGGCTGGATGATGTAT---------------------------
-----GTGGCACCTTCTATCCG-AAAAA-AAAACTCCAAACGACCACATG------------------------------
GATTCATCAACTAATAATTCGTGTCTGTGGACATGGCCATAGCCCATAGCCCATAGCTTCGTAGGGCGAATGATTAGCTG
TA---GGTGGCCATTCAATGTAGGCTAGCCCAGCTCTTCGTTGTAC----AAAAAACATAAGTAGATGCGGCCCAGCTAG
CACCTCTGTTTCAGCCCAGTTCATGATTGCACGGCAGATAGTGGGATTCCATC------------GATTTCACGGTGGCT
ACACACAAAGCACTACTTGGCACTACTTGGCTCAATGGATAGGAACCGAGACGAGGCAGGGTCCAATTCCCCGGGAAAGT
GGCATGGGTTGAAATGGACCTGAGTGAACACGCAGCACGCAAGGGGCAACTTGGTCTTGTCATGTAGCACAGCAGCGTGG
CTTCGTGGATATCGTTCCCAGGCTCCAGGAAACGAGAGGTGCAGAAACAAACTCCGCCACGGTTACTCTGCAGACCAAAA
GCAGCAGCACACCAAAGACCCAGAGAATCAAGAGGAGATGCTTACTCTTCACACCGTTCGGACATCCCTTCCCTGGCCGC
GCAGATCCTCCCCGCGCCGACATGCACTGCATCTAAGCA---GGAGGAAATTTTCCATCTGTAAGAGCAGCTCCGAAGAT
GCTGGATCCGACGCTCCCCTGCCGCACGGCGGTGACCAACGCCAGCAGGAGGTGCTTGCAAAAATCGCCATGCTTCAGAC
GCAGAAGGTCCGCATCACAAACTTCCTGGATGAGCGGTCTGCTTACCTGACCAAGTTCACCAAGGATGCCGACACCGAGT
TTGATATGATTGGGCAGAACGCCATGAAAGAGCTCGATCAAATTGGGGACCAGGTGAGCATCCCTTGTCATGGACGGATT
AAACAGCATATTGCTTCTTCATTTAGTGTCTGACAGAGAATTGCATTTCTGATATGATAGATAATGGAGCGACTCGACAG
CAAGATGCAGTCCTACGAGGAGACAGCTGAAATGCAAAGGCAGGAGATAGAAATGAACGAGAGGGTGTTAGAAGACTTCG
AAGATTGGATTGAAGAGGAGAAAAACGAAGGCATGTTCTTCAAAAGCCTTGGGAAGGTCAAAAAACCTCAAAACAATGAG
GAAATCAAGGTGATGGCTAGGATCGAAGCACAGAAGGTCACAGAGATAACAAAGGAGAATGCAGGGTCAAAAGCTCGGAT
GAATATTTACCTTGCACTGATGGCGATACTCAGTCTTACAATCGCAAATGCCGTCTTTGCAACGCCAGAGGTGGAATGGA
GGAAGGTTGCTGCTCTGGGTTTAATTTTCATTGGCCTGGTTGCTCAGGTCATCTATGAGCAAGATATATCCCCACCGGCA
GCTGACAAGAATGAAAAAAGAGAAGAATGAAAGAGCTGTGCACCCTGAGTGAAACATCAAAAAGCAGCAAGAGCTTCATC
GATATAGATGTAGACTGTATAAAATCAAGATATAGATTGTGTAATCTTAGTTATAATTTAAGGTGTAGCTTGGCCTATAA
ACCACAGGTTTCTTACACCTGAGGTCTGATAAACTCAAGCTGTCTTCAATCTTGCATCAAAGATATGTTTCAGCAATATA
ACTTTCAAAGCCAAAACCATGTAACGAAGTTACAATTTTGATGCACACAACACGTCAAGTTACTCAAATTTCGATCAAAA
GAGGCTAAGAGTAT-AGAAGAGATGGCAAAAGAGA-GTGCAGGATCAATGCTAAAATGAGCATTTACCTTGGACTGGTGC
CAATGCA--------AAGTCTTACATTTCCAGGACCAGATGCTGTCTTTGCAACAACTGGATAGAGTAGATGGAAGGTTG
CCGTTCTCGGTCAATTTTTTGATCGCCTGGTTGCTCAAGCCATCCATCAGAAGGACATATGAGCAACAGGAGCTGAG--G
AAAAAAAAAATGAAGATCCGTACTGTACACTCAAGAGTTATAGGGTAGAAAGTATTAGAAGAAGATAATTCTTAGTGAAG
GGGAAGACCAGGATAAAGTTATGGGAGCCATTGTCTGCTGAGTATCATGTTAACTGGAAGACTATCTACTACCTCCATTC
CCAAATATAACTGTCCCAACGTCTAACTGGCCCAACGTCTAACTGTCCCAACGTCTTATATTTAGGAATGGAGGTAGTAG
TTCTCAAGATGATTACAAACGTAAATGTTGTTTTCCAACGTCTTAGGTAGAGTGGAGAAATGTTACTCCGAGTCTGATTT
TCCATGGGCCTGCTTGCTCAGGTAATTTGTGGACAGAAATATCACCACAGAAGCTGGCGAGCGGGATGAATGGTCGTATA
TTTTATAATCGAAGATAACATTTGCAGTGTAGCTTGGCCTATAAACCACAGGTTTTCTTGAACCTGAAATCTGATAAACT
CAAGCTGTCTTCACTATTGCATCAGAGATATGTTTCAGCAATTACAACTTTCAAAAGCCAAAATAATTGTAACATAGTTA
CAATTTTGATGCACCTAACACTTCAAATTTGCCAAATTTTGATTCGAAGTGGGTATAGAAGATATGGCAAAAGAGGTGCA
GGGTCAATACTCAAATGAGCATTTACCTTGGGCTAATGGCAATGCTCGGTCTTACATTTCCGGATGCTATCTTTGCAACA
ACTGGATAAAGTAGATGGAAGGTTGCCTGGTTGCTCAGGTCATCCATGAGCAGTATATATAAGCACCAGAAGTACGAAAA
AAGAAAATGAAGATATGTATACTCAAGACTTAAAAGTTAAAGGGTAGAAAGCTTAAGTAGCACTAGAATTCAGTTAATAT
TTTCAGTACCAATACAATAGTGCATAGAATTCATATGAATGTATGCGGTTTTTGTA---ATCGAAGATACCATTTATGAT
GTCGCTTGGCATATAAACCACAAGTTTCTCAAACCTGAGGTCTGATAAACTCAAGCTGTCCTCACTCTTGCATCAGAGAT
ATGTTTCAGCAATTACAACTTTTAAAAGCCAAAACAGGGTAACAGGATTACAATCCAGATGCACTCTAAAAATCCATGTT
--------------CACAAATTTTGATCGAAAGAGGGTACCAAAAATTCAAAATATTGCCAAATAAAAAGTTAAGGTTCA
ACAATGAATAGTCAAGAAAATAGACGGAATTCGAAGAATAAAAAACTTTTTATCTCAAGAAAAAAAATGGTGAAGGAGAA
GATGCGATGAAGTTAAGCGATGTCATTCTCTGCTGAGC------------------------------------------
--------------------------------------------------------------ATCTTGTCAACTGGAAGA
CTATGTATTGACCTTGAAATAATCAGCCAGTGTTACACTTTAGGCGGTTCTGGTATTC--GAACAGACTAAAAAAGGGAA
TGGTTGGGAATGACGTAACCCTGCCACAAGGACACACAGAAACCCTCTCATGTTCAATGCCTCCACATTAGTTGGAGAGT
GATGGGTGCAAGATGGAGATCTGGTTCTCAAGATGATTACAAATACAAGCACATTTATTACCTTGGGCTGATGGTAACAC
TCCCATCTTACAATTGTCAGTGACGGCTTTGCAACGCCAAGGCGAAATGGATGGGGGTTGGTCTAATTTTCACTCGCTTG
GTTGGTCAGGTCATTTATGTACAGGGTCACCACCAGAAGCTGAAAGCAGAAGAATGAAAGAGCTGTGCACTTGGTAAAAC
ATGAATAGGTAGCAATAGAGTTTAATCAGTACTTTTCACTAGCAATGACCACTACTAACATTAATTTCAATGGATATAAT
CTTTAGAATAGACCATATTACTGAAGGTGTAGCTTGGCCTATAAACCACAGGTTTCTTAAACCTGAGATCTGATCAGCAC
AGGCCACCTTTAATCTTGCAAAAAGATAATCCAGCAATACTACTTTCAGATGCCAAAGCATGGTAA
>SNPs
----S-S---------------------------------------S------------S-------S------------
------------S---------------S-----S-------------------------------S--S----------
---------------SSSSS-------------S----S--------SS-------S---------------------S-
----------SSS------------------------------------------------------S-----------S
--------------S-----S--------------SS---S-S-SS----------------------------------
-----------S---S------------S--------S------SS---------S------------------------
S---------------------------------------------S---------------------------------
------------S---------S-----S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
------------------------------------------S-------------------------------------
--SSS-----------------------------------------S--S------------------------------
----------------------------------------------S-----SSSSSSSSSSSSS---------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------S-S---
-------------------------------------------S------------------------------------
---------------------------------------SSS--------------------SSSS----S---------
--S----------S------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-S--S--------------------------------------------------------------SS-----S-----
----------S-S----------S--------------------------------------------------------
---------------------------------------------------------------------------S----
----S-----S-----------------------------------------S---------------------------
-----------------S-S---S----------------S------SS--S----------S-----------------
--------------------S----------S------------------------------------------------
--------------------S----------------------------S----------------------------S-
---------S----------------------------------------------------------------------
--------S--------------S--------------------------------------------------------
-------------------------------------------S------------------------------------
------------------------------------------------------------------------S-------
--------------S---------SS----------------------S-----------------------------S-
------S--------S----------------------------------------------------------------
-----------------S--------------------------------------------------------S--SS-
----S--S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
-S-S------------S------------------S---------------------------------------S----
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
SSSSSSSSSSSSSS------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S-----S--
---------------S----------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_68
------------------------------------------------CTCTGGGAATTCGCTCGAGG------------
--------------------------------------------------------------------------------
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>reverse_1823
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------GGGGTCAAAAGCTCGGAT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_767
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GCCCAGCTCTTCGTTGTACA---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_2498
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------GTTGATCGCCTGGTTGCTCA-------------------------------------------
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------------------------------------------------------------------
