>input_sequence_61512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGTGGCAGTCCA
AGCCAGTCCTGCTCCTGCTCCTGCTCGCCGTCACCACGGCGGCGACCAGCGGTAAGCCGCTGCTCACGAAGATCACCAAG
GGTGCCGCGTCCACGGCGCTCTACACCGCGCCCCTCAGCGCCGGCCGCCCGCTGGTCCTCGACCTGTCCGCCCCGGCCAT
CACGACGCCGTGCAGCGGGCAGACGACGACCGTCACGCTCTCCGCCAACTCCACCGACGGCAGCAACCCGCTGTCCCCGG
TCTCCTTCGCTGCCACCGCCACCTGCGCGGCGGCCCCCTCCGGCGCCGTCGGCGTCGCGGGGCTCGCGCGCTCTAGCGCA
TCGTTCCCGGCACAGGTCGCCAGTACACAGAAGGTGGCCAACTCGTTCGCGCTCTGCCTCCCGAGCGACGGCAGGACCGG
GTTCAGCGGCAACGGCGTGGGCGCGGCCATCTTCGGTGGCGGCCCGTTCTTCCTCGCGCCCCCGGCGGACCGGCCGTCCA
TTACGACGCTCCTCTCCGACGGCGTCCCGCTCCGCCAGCCCTTCGCCGGGAACCCCGGCTACTTCGTGACCGCCACCAAC
GGCATCGCCATCGACGGGACGCGCGTGACCGTGTCCGGCTCCGGTGCGCTTGTGGTCGGCCTCTCCACCACGATCCCCTA
CGCGCAGCTCCGGAGCGACGTGTACCGCCCCTTCATCACGGCCTTCGACCGCGCCATGGGATCCAGCGCCAAGGTGGCGG
CGGTGAAGCCATTCGAGCTGTGCTACGACTCGTCCAAGCTGGCGCCGACGCGGTTCGGGTACCTGGTGCCGAACGTGGAC
GTGATGCTGGAGGGCGGGACGAACTGGACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCGTCCGGTCGGGAGGCAGCACGGGGGGCGCGACGCCGGCGCTGGTGATCGGAGGGTTCCAGATGGAGAACAAGC
TGGTGGTGCTGGACAACGGCAAGAAGACGCTCAGCTTCACCCAGAACCTCCCGGGCATGGGCTTCTCCTGCAGCAACTTC
AATTTCACCAGGGCCGGCTAG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3D_1_TraesCS3D01G039400
AGAGATCGATCTAGTCAAATCATCTGACTGGTGGACAGAGACAGATGTACTGTACGTACGCATCACATCATATAGGTATG
AATGCTACCTGGCACACTACCCTGGCCATGGCGTACGTGTAGGTAGGAACGGAGGGACCCTCCTTCAATGCCTGGTTAAA
CAATCGCATGGTGTGCGGTTCAGCGGCTGCCAAGCCAACGTACGTTTTTTTTTTTTGAGGGAGCCAACGTACGTTTTCGA
GTCTTCGATCGAGTTCCACATGTACACTGCATTGCAATGGGACGTGGCATGGCACGTACAACTGATACCGACGCCGACAC
AACCGACACCAAGTGCTGCATATCGCGTCACCTCCTGCATCTTATCTTAACCC---GTGCAGGTCATGTGATGGAACACA
TCCGTAGTTTTTGGTTAGCAATCAGTGCACGCACACGCAAGATCATTAGACATGTCATGCATGGCACTGCCACTGTGCAT
GGAGCTTAGACTTTGAATGCGACTTTCAACGTGAATCATGCATGGCCGGATAACGTAGAAAAAGGAGAGAAAATTCAGAG
TCCTCATTCCTCAAGCAACATCGCAGCATTGATCATCCGAACACGCATGCATCGATCTTATCTCCGCATCGGTCGACCTG
TGGAGGGTGGGCACTTTGCACTTTGCAATGCTATAGTAGCTCAACCAT-----------ACCCGAATAAGAACACATATG
TAACCACAGGGAAAAACGCATGCTACCAAATAATGCGCGCATGCAAAATTTTTGGATTAGAGGAGAATCATCTGTGACTG
TCATGA-TGTGATCGATAGAACATAGAAAAATGCAATTCTGGTTCGCCAAGCAACACTGATCGCGACGAATGTTGACCAG
CCATGCATTGGTCAAACTGATTATTCTCCAGATCGAGGGTATATATAGGACGCACGTACGTGCCTACCTTCACAGCATCG
ATCCTCCCAACTCCTAAGCTTAAGCTCGGCTTCGCCCAA------CACATCACCGGCC------AAAATGTGGCAGTCCA
AGCCAGTCCTGCTCCTGCTCCTGCTCGCCGTCACCACGGCGGCGACCAGCGGTAAGCCGCTGCTCACGAAGATCACCAAG
GGTGCCGCGTCCACGGCGCTCTACACCGCGCCCCTCAGCGCCGGCCGCCCGCTGGTCCTCGACCTGTCCGCCCCGGCCAT
CACGACGCCGTGCAGCGGGCAGACGACGACCGTCACGCTCTCCGCCAACTCCACCGACGGCAGCAACCCGCTGTCCCCGG
TCTCCTTCGCTGCCACCGCCACCTGCGCGGCGGCCCCCTCCGGCGCCGTCGGCGTCGCGGGGCTCGCGCGCTCTAGCGCA
TCGTTCCCGGCACAGGTCGCCAGTACACAGAAGGTGGCCAACTCGTTCGCGCTCTGCCTCCCGAGCGACGGCAGGACCGG
GTTCAGCGGCAACGGCGTGGGCGCGGCCATCTTCGGTGGCGGCCCGTTCTTCCTCGCGCCCCCGGCGGACCGGCCGTCCA
TTACGACGCTCCTCTCCGACGGCGTCCCGCTCCGCCAGCCCTTCGCCGGGAACCCCGGCTACTTCGTGACCGCCACCAAC
GGCATCGCCATCGACGGGACGCGCGTGACCGTGTCCGGCTCCGGTGCGCTTGTGGTCGGCCTCTCCACCACGATCCCCTA
CGCGCAGCTCCGGAGCGACGTGTACCGCCCCTTCATCACGGCCTTCGACCGCGCCATGGGATCCAGCGCCAAGGTGGCGG
CGGTGAAGCCATTCGAGCTGTGCTACGACTCGTCCAAGCTGGCGCCGACGCGGTTCGGGTACCTGGTGCCGAACGTGGAC
GTGATGCTGGAGGGCGGGACGAACTGGACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCGTCCGGTCGGGAGGCAGCACGGGGGGCGCGACGCCGGCGCTGGTGATCGGAGGGTTCCAGATGGAGAACAAGC
TGGTGGTGCTGGACAACGGCAAGAAGACGCTCAGCTTCACCCAGAACCTCCCGGGCATGGGCTTCTCCTGCAGCAACTTC
AATTTCACCAGGGCCGGCTAGTGATCCACATCGTTTGTTGCATGCTGTGCGTACCAGGGCTCTATGTTGAAAC----AAT
AAAGGATATAAAATACTAAATCCAATTGAAGTGACACTTTGTTTACGCTGTTAATATTAGTCAAGATATGAATTGTATGG
AGGCACTATGGCAAATTTGTTTACACTTTTGTTTACGCGATGATGACAAATTTAGTTTGCAAGCACGCCAGTTTTTTTGA
CAAAAAAAAGAAGAAGAAGAAGAACCGTGACGGATTTTGCCATGCTAGGCAACTAAACTTGTCATCCTCGAAGAACATAT
TTTGCCATGAAACCATTTGATTTACCATGGTAAAAGAATCTCATGTATGATTTGTAGTGGAGTCCTAATTGTATTGCAAC
TAATATCAGGTAAGATATAGATTATGTGCTAATATTATGTAGGACAG-----------------AATTAGTTAGTTAGGG
ATGTGGAGTATCTTCTTCTGAGCTCAAATGCTCCCTAATGAGCAGAAAAATCAAAAAAAAAATAGTGAAAAACTTAAAAA
AATTTAAACATATGATAAAATTTGACAAACTTTTTGTATGCTTGCAAAATGTCAACATGAAATGCATTCATGAAAGTCGT
GGTAAAAAAAATTGATGCTCCAAAAATGCTAGTTTTGAAAATTTGACAAACTTTTTCTATGCTTCCAAAATGTCAACATG
AAATGCATTCGTGGAAGTCGTGGCA--AAAAAATTGATGCTCCAAAATGCTAGTTTTGAAAATATTTTGGGGTGCTGGTT
TTGTTTTTTCTGCCACAACTTCCACGAATTTCATTTCATGCTGAAATTTGT--------------------CAAAGTTTA
CAAAAAT-CATTAAGAAAATTTTGAATTATTTTACTATTATTTCAATTTTGTTGTTCATCAGGATGCATTTGAGCTTGGG
ATCAAAATAAGACTTTCACTTAGTTAGTGGCGACATTGATATTAAGCTTGATATTAATTAGTGGAAGGTGATAAACATGT
TTAACGCTAAGCACCCAAGCGACGT
>chr3A_255
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCCACATGTACACTGCAATGTAATGGGACGTGGCACGTACACTCACACCGAC--------------
-ACCGACATCGAGTGATACATATCGTATCGGG---TGCATCCTATCTTAACGACTTGTGCATGTCATGTGATGGAACATA
TTCGTAGTTAT------------AGTGCACGCACACGCAAGATTGTTAGGCATGTCATGA----------CACTGTGCAT
GGAGCTTAGACTTTGAATGCGACTTTAAACACGAAT----CATGGCCAGATAACATAGACAAAGGAGAGAAAATTCAGAG
TCCTCATTCCTCAAGCAACATGGCAACATGCCTCACCCGAACACGCATGCATCGATCTGATCTCCACATCGGCCGAACTC
AGGAAGGCGGGAAGTTTGCACTTTGCAATGCTATAGCTGAATCATACTAGAAGAATTTGACCGGAATAAGAACACATATG
TAAACACAGGAAAAAACGCATGCTACCAATTAGTGCGCGCATGCAAAATC-TTGGATTAGAGGAGAATCATCTGTGACTG
TGATGATTGTGATCGATAATG--TAGAAAAATGCAATTCTGATACGCCAAGCAACTCTGATCGCCCCAAACGTTGACCAG
ACATGCATTGGCCAAACTGATTATTCTCGAGATCGAGGGTATATATAG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GACGCTCAGCTTCACCCAGAACCTCCCGGGCATGGGCTTCTCCTGCAGCAACTTC
AATTTCACCAAGGCCGCCTAGTGATCCACATCGTTTGTTGCATGCTGTGCGTACCAGGGCTCTATGTTGAAACAATAAAT
AAAGGATATAAAA-ACTAAATCCAGTTGAAGTGACGCTTTGTTTACGCTGTTAATATTAGTCAAGATATGAATTGTATGG
AAGCACTATGGCAAATTTGTTTACACTTTTGTTTACGCGATGATAACAAATTTAGTTTGCAAGCACGCCAGTTTTTTTGA
CAAAAAAAA----AAGACGAAGAACCATGACGGAGTTTGCCATGCTAGACAACTAAACTTGTCATCCTCGAAGAACATAT
TTTGCCATGAAACCGTTTGATTTATGATGGTAAAAGAATCTCATGTATGATTTGTAGTGGAGTCCTAATTGTATTGCAAT
TAATATCAGGTACGATATAGATTGTGTGCTAATATTATGTAGGATATAATATTATGTAGGATATAATTAGTTAGTTAGGG
ATGTGGAGTATCTTCTTCTGAGCTCAAATGCTCCCTAATGAGCAGAAAAATAG---AAAAAATAGTGAAAAACTTTAAAT
TCAAACAAATTATGATAAAATTTGACAAACTTTTTGTATGCTTGCAAAATGTCAACATGAAATGCATTCGTGAAAGTCGT
GGC-AAAAAAAATTGATGCTAAAAAATGCTAGTTTTGAAAATTTGATAAACTTTTTGTATGCTTGCAAAATGTCAACATG
AAATGCATTCGTGGAAGTCGTGGCAAAAAAAAATTGATGCTCCAAAATGCTAGTTTTGAAAATATTTTGGGGTGCTGGTT
TTGTTTTTTCTGCCACAACTTCCATGAATTTCATTTCATGCTGAAATTTGTGAAGCGCACAAAACATTTGTCAAAGTTTA
TCAAAAAAATATGAAGATTTTTTGAATTATTTTACTATTATTTCAATTTTGCTGTTCATCAGGGTGCATTTGAGTTTGGG
GTCAAAATAAGACTTTCACTTAGTTAGTGGCGACATTGATATTAAGCTTGATATTAATTAATGGAAGGTGATAAACATGT
TTAATGCTAAGCTCCGGAGTGACGT
>chr3D_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GA-TGTGATCGATACCG--TAGAAAACTGAAACTCTGGTTCGTTAAGCAACATTGATGGCGACAAATGTTGACCAG
GCATGCGTTGGTGAATCTGAT-----TCCAGACCGAGGGTATATATAGGACGCACGTACGTGCCTTCCTTCACAGCATCG
ATT--------------------------------CCAA------CTCAACGCAAA-----CCGAAAATGTGGCAGTCCA
AGCCAGTCCTGGTGCTCCTCCTGCTCGCCGTCTCCACGGCGGCGACCCTCGGAAAGCCGCTGCTCACCAAGATCACCAAG
GGCGGAGCGTCCACCGCGCTCTACACGGCGCCCCTCAGCGCCGGCCGCCCGCTCGTCCTCGACCTCTCTGCCCCGGCCAT
CACGACGCCGTGCAGCGGGCAGACGACAAAAGTGACGCTCTCCGCCAACTCCACCGACGGCAGCAACCCGCTGTCCCCGG
TCTCCTTCGCTGCCACCGCCACCTGCGCGGCGGCACCCTCAGGCACCGTCGGCGTCGCCGGGCTCGCGCATTCCAGCGCC
TCGTTCCCGGCCCAGGTGGCCAGCACGCAGAAGGTGGCCAACTCGTTCGCGCTCTGCCTCCCGAGCGC------------
------------CGGCGTGGGCGCGGCCATCTTCGGCGGCGGCCCGTTCTTCCTCGCGCCCCCGGCGGACCGGCCGGCCA
TCACGACGCTCCTCTCCGATGGCGTGCCGCTCCGCCAGCCCTTCTCCGGGAACCCCGGCTACTTCGTCTCGGCCACCAAC
GGCGTCGCCATAGACGGGACGCGCGTGGCCGTCTCCGGCTCCGGCGCGCTCGTGGTCGGCCTCTCCACCACTATCCCCTA
CGCGCAGCTCCGCAGCGACGTGTACCGCCCCTTCATCACGGCCTTCGACCGCGCCATGGGCTCGAGCGCGAAGGTCGCGG
CCGTGGCGCCGTTCGAGCTGTGCTACGACTCGTCCAAGCTCTCGCCGACGCGGTCGGGCTACTCCGTCCCGCAGGTGGAC
GTGATGCTGGAGGGCGGGACGAACTTCACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCGTCCAGGCGGGGGGCGGCACGGCGGGCGGGACGCCGGCGGTGGTGATCGGAGGGTTCCAATTGGAGAGCAAGC
TGGTGGTGCTCGACAACGACAAGAAGACGCTCAGCTTCACCCCGTACCTCCCGGCAATGGGCTTCTCCTGCAGCAACTTC
AACTTCACCCGGGCGGGGTAGTGATCCACA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3A_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GA-TGTGATCGATACCG--TAGAAAATTGAAACTCTAGTTCGTTAACCAACATTGATGGCGACAAATGTTGACTAG
GCATGCGTTGGTGAATCTGAT-----TCCTGATCGAGGGTATATATAGGACGCACGTACGTGCCATCCTTCACAGCATCG
ATT--------------------------------CCAA------CACAACACAGCACGAGCCGAAAATGTGGCAGTCCA
AGCCAGTCCTGGTCCTCCTCCTGCTCGCCGTCTCCACGGCGGCGACCGTCGGCAAGCCGCTGCTCACGAAGGTCACCAAG
GGCGTAACGTCCACCGCGCTCTACACGGCGCCGCTCAGCGCCGGCCGCCCGCTGGTCCTCGACCTCTCCGCTCCGGCCAT
CACGACGCCGTGCAGCGGCCAGACGACGACCGTGACACTCTCCGCCAACTCTACCGACGGCAGCAACCCGATATCCCCGG
TCTCCTTCGCTGCCACCGCGACATGCGCGGCGGCCCCGTCCGGCGCCGTCGGCGTGGCGGGGCTCGCACGCTCCAGCGCA
TCGTTCCCGGCCCAGGTAGCGAGCACGCAGAAGGTGGCCAACTCGTTCGCGCTCTGCCTCCCGAGCAG------------
------------CGGCGTGGGCGCGGCCATCTTCGGCGGCGGTCCATTCTTCCTAGCTCCCCCGGCGGACCGGCCGGCCA
TCACGACGCTCCTCTCCGACGGGGTCCCGCTCCGCCAGCCCTTTTCCGGGAACCCCGGCTACTTCGTCTCAGCCACCAAC
GGCATCGCCATCGACGGGACGCGCGTGGCCGTCTCCGGCTCCGGCGCGCTCATCGTCGGCCTCTCCACCACGATCCCCTA
CGCGCAACTCCGCAGCGACGTGTACCGCCCCTTCATCACGGCCTTCGACCGCGCCATGGGCTCGAGCGCGAAGGTGGCGG
CCGTGGCGCCGTTCGAGCTGTGCTACGACTCGTCCAAGCTGTCGCCGACGCTGTCGGGCTACTCCGTCCCGCAGGTGGAC
GTGATGCTGGAGGGCGGGACGAACTTCACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCGTGCAGGCCGGAGGCGGCACTGGGGGCGCGACGCCGGCGGTGGTGATCGGGGGGTTCCAGATGGAGAACAAGC
TGGTGGTGCTCGACAACGACAAGCAGACGCTCAGCTTCACCCCGTACCTCCCAGCCAGGGGGTTCTCCTGCAGCAACTTC
AACTTCACCAGGGCGGGCTAGTGATCGACA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3B_904
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTATATATGGGACGCACGTACGTGCCATCCTTCACAGCATCC
GAAC-----------AAGCTTAAGCAGAGCTGCCCAACGAGCAACCACACCACCGGCC------GAAATGGGGCAGTCCA
AGCCAGTCCTGGTCCTCCTCCTGCTCGCCGTCTCCACTGCGGCGAGCAGCGGCAAACCGCTGCTCACTAAGATCACCAAA
GGCGGCGCGGCGACGGCCCTGTACACGGCGCCGCTCAGCGCCGGCCGCCCGCTGGTCCTCGACCTCTCCGCCCCGGCCAT
CACGACGCCGTGCAGCGGGCAGACGACGACCGTCACGCTCTCGGCCAACTCTACCGACGGCAGCAACCCGCTATCCCTGG
TCTCCTTGGCTGCCACTGCCACCTGCGCGGCGGCACCGTCCGGTGCCGTCGGCGTCGCGGGGCTCGCGCGCTCCAGCGCC
TCGTTCCCGGCTCAGGTGGCGAGCACGCAAAAGGTGGCCAACTCGTTCGCTCTCTGCCTTCCAAGCGACGGCAGGACCGG
GTTCACCGGCAACGGCGTGGGTGCGGCCATCTTCGGCGGCGGCCCGTTCTTTCTCGCGCCCCCAGCGGACCGGCCGTCCA
TCACGACGCTCCTCTCCGACGGGGTTCCGCTGCGCCAGCCCTTCGCCGGTAACCCCGGCTACTTCGTCTCAGCCACCAAC
GGCATCGCCATAGACGGGACGCGCGTGGCCGTGTCCGGCACCGGCGCGCTCGTGGTCGGCCTCTCCACCACGATCTCCTA
CGCGCAGCTCCGTGCCGACGTCTACCGTCCCTTCATCACGGCCTTCGACCGCGCCATGGGCTCCAGCGCCAAGGTCGCGG
CCGTGGCGCCGTTCGAGCTGTGCTATGACTCGTCGAAGCTGGCGCCGACGCGGTTCGGGTACCTGGTGCCGAACGTGGAC
TTGATGCTGGAGGGCGGGACGAACTGGACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCGTCCGGTCTGGGAGCA------CGGACGCGACGCCGGCGCTGGTGATCGGAGGGTTCCAGATGGAGAACAAGC
TGGTGGTGCTGGACAATGGCAAGAAGACGCTCAGCTTCACTCAGAACCTCCCGGGCATGGGGTTCTCCTGCAGCAACTTC
AATTTCACCAAGGCCGCCTAGCGATCCACATTGTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3B_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATATATAGAACCCACGTACGTGCCTTCATTCACAGCAAGC
ATCTTACCA------AAGTGTAAGCTGACCTCCCCAACGACG-----CAACACCGGCC------GAAATGTGGCAGTCCA
AGCCAGCCCTGGTCTTCCTCCTGCTCGCCGTCTCCACGGCGGCGACCGTCGGCAAGCCGCTGCTCACGAAGGTCACCAAG
GGCAGCGCGTCCACGGCCCTCTACACGGCGCCCCTCAGCGCCGGCCGGCCGCTCGTCCTCGACCTCTCCGCCCCGGCCAT
CACGACGCCGTGCAGCGGGCAGACGACGACTGTGACGCTCTCCGCCAACTCCACCGATGGCAGCAACCCGCTGTCCCCGG
TCTCCTTCGCTGCCACCGCCACCTGCGCGGCGGCCCCCTCAGGCGCCGTCGGCGTCGCGGGGCTCGCGCGCTCCAGCGCC
TCGT-CCCGGCCCAGGTGGCCAGCACGCAGAAGGTGGCCAACTCGTTCGCGCTCTGCCTCCCGAGCGC------------
------------CGGCGTAGGCGCGGCCATCTTCGGCGGCGGCCCGTTCTTCCTCGCGCCCCCGGCGGACCGGCCGGCCA
TCACCACGCTCCTCTCCGACGGCGTCCCGCTCCGCCAGCCCTTCTCCGGGAACCCCGGCTACTTCGTCTCAGCCACCAAC
GGCATCGCCATCGACGGGACGCGCGTGGCCGTCTCCGGCTCCGGCGCGCTCGTGGTCGGCCTCTCCACCACGATCCCCTA
CGCGCAGCTCCGCAGCGACGTGTACCGTCCCTTCATCACGGCCTTCGACCGCGCCATGGGCTCGAGCGCGAAGGTCGCGG
CCGTGACGCCGTTCGAGCTGTGCTACGACTCGTCCAAGCTGTCGCCGACGTTGTCGGGCTACTCCGTGCCCCAGGTGGAC
GTGATGCTGGAGGGCGGGACGAACTGGACGGTGGTGGGCGGCAACTCCATGGCGCAGGTGAACAGCGGCACGGCGTGCTT
CGCGTTCATCCAGGCGGGAGGCGGCACGGGGGGCGCGGCGCCGGCGGTGGTGATCGGGGGATTCCAGATGGAGAACAAGC
TGGTGGTGCTCGACAATGACAAGAAGACGCTCAGCTTCACCCCGTACCTCCCGGCCAGGGGCTTCTCCTGCAGCAACTTC
AACTTCACCAGGGCGGGGTAGAGATGCACA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3D_2170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GTTTACGCTGTTAATATTAGTCAAGATATGAATTGTATGG
AGGCACTATGGCAAATTTGTTTACGCTTTTGTTTACGCGATGATGACAAATTTAGTTTGCAAGCACGCCAGTTTTTTTGA
CAAAA-AAA----AAGAAGAAGAACCGTGACGGATTTTGCCATGCTAGACAACTAAACTTGTCATCCTCGAAGAACATAT
TTTGCCATGAAACCATTTGATTTACCATGGTAAAAGAATCTCATGTATGATTTGCAGTGGAGTCCTAATTGTATTGCAAC
TAATATCAGGTAAGGTATAGATTGTGTGCTAATATTATGTAGGACAG-----------------AATTAGTTAGTTAGGG
ATGTGGAGTATCTTCTTCTGAGCTCAAATGCTCCCTAATGAGCAGAAAAATC---AAAAAAATAGTGAAAAACTTTAAAA
AATTCAAACATATGATAAAATTTGACAAACTTTTTGTATGCTTGCAAAATGTCAACATGAAATGCATTCGTGAAAGTCGT
GGC-AAAAAAATTGATGCTCCAAAAATGCTAGTTTTGAAAATTTGACAAACTTTTTCTATGCTTGCAAAATGTCAACATG
AAATGCATTCGTGGAAGTCGTGGC--AAAGAAATTGATGCTCCAAAATGCTAGTTTTGAAAATATTTTGGGGTGCTGGTT
TTGTTTTTTCTGCCACAACTTCCACGAATTTCATTTCATGCTGAAATTTGTTAAGCGCACAAAACATTTGTCAAAGTTTA
CAAAAAAACATTAAGAAAATTTTGAATTATTTTACTATTATTTCAATTTTGTTGTTCATCAGGATGCATTTGAGCTTGGG
ATCAAAATAAGACTTTCACTTAGTTAGTGGCGACATTGATATTAAGCTTGATATTAATTAGTGGAAGGTGATAAACATGT
TTAACGCTAAGCACCGGAGCGACGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------S--S--------------S-SSSSS-SSS--S--SSSSSSSSSSSSSSS
S-------S-S----S-S-------SS--SSSSSS------S---------SS--------S----------------S-
-S-------S-SSSSSSSSSSSS--------------------SS----S---------SSSSSSSSSSS----------
--------------------------S---SS----SSSS-------S------S----S--------------------
---------------------S---S---SSS---S----------------------S------S------S---S--S
S---S--S---S-S----------------------SS-SSSS-SSS---------------S-----------------
---S------S------------------S--S----------------SS-----------------------------
-S----------------SSSSS--------------------------------------------S------------
S----------------------------------------------------------------S--------------
-----S---SSSSSS-----------SS---S-S---------------S------------------------------
-----------S----S---------------S-------------------S---------------------------
--S-S---------------------S--------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------S-----S-----S--S-----------------------------------------------------
-----S------------------------------S-------------------------------------------
-S-----------------------------------------------------------------SS-S---------
---------------------------S----------------S-----S-----------------------------
------------S-----------------------------------------------S-------------------
-S----S---S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S----------S----------S--------------------------------------------
--------------------------------------------------------------------------------
---------SSSS-----------------------------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------------------------------SSS--------------------S----
----S----------------------------------------------------------------S----------
--SS------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------SS--------
>forward_346
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CACCAAGTGCTGCATATCGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_1767
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGCCATTCGAGCTGTGCTAC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_970
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CACAGCATCG
ATCCTCCCAA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_2333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GAAGAAGAAGAACCGTGACGG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
