>input_sequence_61483
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-------------------------------------------------ATGGGGGCGCGCGTCATGGCGTGGTGGCGGG
CAAGGGTGGTCGCGCCCATGCGCCGCGCCTGCAGGCTCGCCGTCGCCGCCGCCCGCGCCCGCGTCCGCAAGGGCGGTACG
TAAGCCACCACTACTCGCTACTCTGCTTTTCTTGGAACTGCCACTGAAGCGTGAACTGGATCGATGAACTTCGTAGAAAT
AGTAGTACGTACAATGCAATCGACCCGTTTTCCTAGACTTTGCATGTTAGCTTAGGCAGGCTCA----------------
-------------------------------------GGCATGCATCTAGCTAATGCGACCGCAAAATCATCATGACTGA
ACCAATTAATCTCCGAGACCAAAATTTGCGGAGCCGTCGTGCTTAGTTTTTTTTAGAGAAGACACTCAAATGGCATCTTA
TA---GTACTACTCA---ATCAAGAATATACCCAATAGTTAATGGAAAGACAATAAGATTCGTGGTCAGTTCATGGAACC
AGAAGATAGTAGCAGTGCTCCAAAGAATTAGGTGAAGGAGCATTATCACAAGAAGCAAACAAACGGATCAGAGAGATCGG
CCATGGTCCATGCGCGT--------TATCTTTTTGCACGCTGCTGCACACCA-AAGGACTAGGGACACGTTATCTCGTGC
TTCC--------AACCGCCCATTTCCATTATGTACTTTGGACCACCTAATCTAATCCGCAGCCCTTATGGTGGTTACGCG
GATACATCACCCGGTATTCTCTCTCTGAAATAGGAGTATATAGTAGTA----CACAATGCAAATAATTTGCTGCATAATG
T---------------AGTA-------------------------TTTAGGAGTACTAACACACTGCTTTAATCTTTTCT
TTTTTGCGAATTTAGTAAATAGGAGTACTAACACACTGCTTTAACCTTCGTGTATGGGATGAATGGTATGCAGAGTGCGG
GGTCCTGAACCTTCACCAGGACGTGCAGACGTGCGGCTACCACGACGTGCAGGTGATGTGGGACATGCTCAGCTCCGACA
AGGAGGCCGCTGCCGCCGCCTCGGCGCCGGCGAAGCAGCAGCAGCGGCGGCGGAAGAGGCCGTTCTGGAGGCTGCCTCCG
TCGTTCTGGCCCGCCCGGTCGCCGCGCGCCGCTGCAGCGCAGTGA-----------------------------------
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>chr7D_1_TraesCS7D01G482100
CTGCTGGATCTCAGACGTGACGACGTTCGATGCTGCAGCTGTCACCCACGTATGTGTCTCCGCTTGGA--------CTCT
ACATCCTGTGTGGTATCATATCATGACACCTTCAGAAAACTCTAGCA-TCCACCGAGAGGTGGTTTGAGATCATAGCACG
TGAATTTCAGGACAATAAACGAGCTGACACCAGCAGAAATCAAGGCAAGTTACCCCACAGTTGGTGTTTTCTACTGCTGC
AACGGGATGGACACGGCTGCCTGCCACGACGGTGAGATATATTTTCTCACCTTCA----------------CTCCAC---
--GCAATCTCGTTCCGGAAGAACAACCCAGTCGCAATTCGCAAATGACCGTCTCCCACGGCATCTGCAGGGCGCGGGCTA
CGAAATGATCCGGGTGGGAGCACGCGTGAAGTACGAACGAGCGCGTGCACCACGAGCGCTCCAGCCCATCCGTCCACCCA
ACAACCAGGAAGCGGATCATGTCAAATCACGACGCAACCATAAAATAATCCTAGAAACTGGGATCAGTAAGGTGGGCAAA
TGAT--AGAGTATGTGTAGAATCGAACAGGTCATTTCGAATCCAGAGGCGGAAATTTTGCACATATACATGACGATTTTG
TTAGTAGAGAAT--------------------------------------TTTTTGCTAGAGGACGG-TTTTGTTGGAAG
ATTTATGAAAAG-------------TTTACACGTTGTCTACACGTTTTATGCATTTTTCCACGCTGGGAACTAGCACTGC
TGCGGCAAGTCGGTAGGGCCCCAGAGCTTAAGCGCACGCTTATATAGAACTGCTAGCTAGGGAGTGTGGTGTGGTGTGGC
C--GTGTGGGTGAGGTTCA-TCCGTCAGAGGCCTAATTGTTGGAGAGGCAGGGCGGACGCAGGCTCCTCGCGAGGC--TG
TGCCGGCGGGTGGCAGCCACGGCGAGGCTGGGCGGCCGTCCCCGGCGTCCGGCGGAGCCCTTCGCCGGCGCCGGCGAAGC
AGAGGCGAGGCAGCCGGCGACGCGGCGGCGACAGCGGCGGCACCGGCAGATGGGGGCGCGCGTCATGGCGTGGTGGCGGG
CAAGGGTGGTCGCGCCCATGCGCCGCGCCTGCAGGCTCGCCGTCGCCGCCGCCCGCGCCCGCGTCCGCAAGGGCGGTACG
TAAGCCACCACTACTCGCTACTCTGCTTTTCTTGGAACTGCCACTGAAGCGTGAACTGGATCGATGAACTTCGTAGAAAT
AGTAGTACGTACAATGCAATCGACCCGTTTTCCTAGACTTTGCATGTTAGCTTAGGCAGGCTCA----------------
-------------------------------------GGCATGCATCTAGCTAATGCGACCGCAAAATCATCATGACTGA
ACCAATTAATCTCCGAGACCAAAATTTGCGGAGCCGTCGTGCTTAGTTTTTTTTAGAGAAGACACTCAAATGGCATCTTA
TA---GTACTACTCA---ATCAAGAATATACCCAATAGTTAATGGAAAGACAATAAGATTCGTGGTCAGTTCATGGAACC
AGAAGATAGTAGCAGTGCTCCAAAGAATTAGGTGAAGGAGCATTATCACAAGAAGCAAACAAACGGATCAGAGAGATCGG
CCATGGTCCATGCGCGT--------TATCTTTTTGCACGCTGCTGCACACCA-AAGGACTAGGGACACGTTATCTCGTGC
TTCC--------AACCGCCCATTTCCATTATGTACTTTGGACCACCTAATCTAATCCGCAGCCCTTATGGTGGTTACGCG
GATACATCACCCGGTATTCTCTCTCTGAAATAGGAGTATATAGTAGTA----CACAATGCAAATAATTTGCTGCATAATG
T---------------AGTA-------------------------TTTAGGAGTACTAACACACTGCTTTAATCTTTTCT
TTTTTGCGAATTTAGTAAATAGGAGTACTAACACACTGCTTTAACCTTCGTGTATGGGATGAATGGTATGCAGAGTGCGG
GGTCCTGAACCTTCACCAGGACGTGCAGACGTGCGGCTACCACGACGTGCAGGTGATGTGGGACATGCTCAGCTCCGACA
AGGAGGCCGCTGCCGCCGCCTCGGCGCCGGCGAAGCAGCAGCAGCGGCGGCGGAAGAGGCCGTTCTGGAGGCTGCCTCCG
TCGTTCTGGCCCGCCCGGTCGCCGCGCGCCGCTGCAGCGCAGTGAGGCGAACGGCGTACGAGCTGGTGCCTGGCAATGTG
GACAGAAGGCATATATCATGGCACCCTGCCGCTGTCATGCTGCTGCCTGCCATTGCGCCCCGAGTTCATGGCAATGATCC
CTGCGACCAGACCAGCCCGACCATGCATGTGTATACAAGATTATTGTATAGTTTTTGGACAGAGCAATTGAGTTCTGCTC
TTATCTGGTGTTAATTTGCCCGTGCTCTGGCTTGGACAGAGCAGTTTGGACTTTGGACTTTGCCCCCATCGATATAGAGT
CTTTGACATCTTTATGCAGGGGCAGCTTTAGGCCCTGTTTGGTTCATAAGTCTTAAGACTTTTTTTTAGTCTCAACTTAT
AAGTCCCAAGTCCCTAAAAAGTCCCTATTTGTTTGGTTTCTGGGAACATGGACTAAAAGACCATATTACAACTATAAGTC
CCTATAAGACTCTCCTTGAGAGTCTTATTTCATAAGTCTCAAATGCCCACCTTAAGTCCCTATAAGTCCCTCCTGTTTGG
TTTAGATGGGACTTATAGGGACTTTCTTAAGTCCCTAAACCTATAAGTCCCTGAAAACAAACACCTTCTTAATCTTTATG
CGGGGGATTTTTTCACGGGATCAACGGCCAGGCTAACGTGGGATTGGAAGTTGGGGATGAGGCGGGCCCCACCCCATTGA
AAATCAGAGGGGAGAGGTTAGTTTGTGAGAAAGATTAAGTAAAAGCTTCATAATCGTCGGTGCATGTAGGTTTATTGAAT
ATTCAACATGCAAGACGAAAGTCATGGAAGAAGTTTTCCCCTCGTTCGCTCACGCTGCTTCCACGGTTCGGTTTGAGCGA
ACCCAAGACACCGCCTTCACGGCCGCGTGGACAGTGTGGGGCCGGCCGTAGCATCGGTGGCGGCGGATCTAGGGTTCTCC
TGCCAAGATTCTTTCACTGCTGGTGCTGGTGGCTGAGGCGTCCAACGGCGTGGTTGGGGAAGACCGGAGGTGCGGGAGCG
TGGTG
>chr7A_1
CTGCTGGATCTCAGACGTGAGGACGTTCGATGCTGCAGCTGTCACCCACGTATGTGTCTCGGGCTTGGTCTCTAGTCTCT
ACATCC--TGTGGTATCATATCACGACACCTTCAGAAATCTCTAGCGCTCCACCGAGAGGTGGTTCTAGTTCGGAGCACG
TGAATTTCACGACAATAAACGAGTTGACACCAGCAGAAAACAAGGCAAGCTACCCCACAGTTGGTGTTTTCTACTGCTGC
AACGGGATGGACACGGCTGCCTGCCACGACGGTGAGCTATATCTTTCTGGGAGAGCGCGACGACGTCTCACCTCCAC---
--GCAATCTCGTTCCGGAAGAAGAACCCAGTCGCAATTCGCAAATGACCGTCTCCCACGGCATCTGCAGGGCGCGGGCTA
CGAAATGATCTGGGTGGGAGCACACGTGAAGTCCGAACGAGCGCGTGCACCACGAGCGCTCCAGCCCATCCGTCCACCCA
ACAACCAGGAAGCGGATCATGTCAAATCACGACGCAACCATAAAATAATCCTAGAAACTGGGATCAGTAAGATGGGCAAA
TCATAGAGTAC------AGAATCTAACAGATCATTTCGAATTCAGAGGCGGAAATTTTGCACATATACATGACGATTGTG
TTAGTAGAGAAC--------------------------------------TTTTCTTCAGCGGACGGTTTTTTTTAGAAG
ATTTATGAAAAG-------------GTTACACATAGTCTGCACGTTTTATGCATTTTTCCACGCTGGGAACTAGTACTGC
TGCGGCTAGTCGGTAGGGCCCCAGAGCTTAAGCGCACGCCTATATAGAACTGCTAGCTAGTGA-----GTGTGGTGTGGC
C--GTGTGGGTGAGGTTTCCTCCGTCAGAGGCCAAATTGTTGGAGAGGCAGGGCAGAGGCTGGCCCCTCGCGAGTTTGTG
TGCCGGCGGGTAACAGCCACGGCGAGGCTCGGCGGCCGTCCCCGGCGTCCGGCGGAGCCGTTCGACGGCGCCGGCGAAGC
AGAGGCGAGGCAGCCGGCGACGCGGCGGCGACATCGGCGGCGGCGGCAGATGGGGGCGCGCGTCATGGCGTGGTGGCGGG
CAAGGGTGGTCGCGCCCATGCGCCGCGCCTGCAGGCTCGCCGTCGCCGCCGCCCGCGCCCGCGTCCGCAAGGGTGGTACG
TAAGCTATCACTACTCACTGCTCTGCTTTTCTTGGAACTGCCACTGAAGCGTGAACTGGAGCGATGAACTTGGTAGAAAC
A-------GTACAATGCAATCGACTCGTTTTCTTCGACTCTACATATTAGCTCAGGCAGGCTCAAAGGATTTGCAGGCAT
AGCAAACCTGCCATTCTTTGCTGAACCGGTGGATGTAGTCATGCATCTCGCTAATGCGACGGAAAATTCATCATGCCTGA
ACTAATTAATCTCCGATACCAAATTTGCCGTAGCCGTCATGCTTAG-TTTTTTTAGAGAAGACGCTCAAATGGCATCTTA
TA---CTATCTGATAATTACCAAGAAAATACCCAATATTCAATGGAAAGACAATAAGATTGGTGGTCAGTTCATGGAACC
AGAAGATAGTAGCAGTGCTCCAAAGAATTAGGTGAAGGAGCATTATCACAAGAAGCAAACAAACGGATCCGAGAGATCGG
CCATGGCCCATGCGCGT--------TATCTTTTTGCACGCTGCTGCACACCA-AAGGACTTGGGACACGTTATCTCGTGC
TTCC--------AACCGCCCATTTGCATTATGTACTTTGGACCACCTAATCTAATCCGCAGCCCTTATGGTGGTTACGCG
GATACATCACCTGATATTCTCTCTCTGAGACAGGAGTATCCAGTAGTA----CACAATGCAACTAATTTGCTGCATAATG
T---------------AGTACTCCCTCTGTTCCATGTTAATTGTATTCAGGAGTACTAACAAACTGCTTTAATCCTCGTT
TGGTTA-----------------------------------------------ATGGGATGAATGGTATGCAGAGTGCGG
GGTCCTGAACCTTCACCAGGACGTGCAGACGTGCGGCTACCACGACGTGCAGGTGATGTGGGACATGCTCAGCTCCGACA
AGGAGGCCGCTGCCGCCGCCTCGGCACCCGCGAAGCAGCAGCAGCGGCGG---AAGAGGCCGTTCTGGAAGCTGCCTCCG
TCGTTCTGGCCCGCCGGGTCGCCGCGCGCCGCCGCAGCGCAATGAAGTGAACGGTGTAGGAGCTGGTGCCTGGCAATGTG
GACAGAACGCCTGTACCATGGCACCCTGCCGCTGTCATGCTGCTGCCTGTCATTGCGCCGCGAGTTCATGGCAATGATCC
CTGCGACCAGACCAGCCCGACCATGCATGTGTACACATGATTTTTGTATAGTTTTTGGACAGTGCAAATCGCTTCTCCTC
TGATCTGGTGTTAATTTGACCGTGCTCTGGCGTGGACAGAGCAGTTTGGACTTCGGACTT-GCCCCCGTCGATTTAGTGT
TTGAT-TATCATCATGCAGGGGGCAGCT----------------------------------------------------
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>chr7B_1
CTGCTGGATCTCAGACGTGACGAA-TTCGATGCTGCAGCTGTCACCCACGTATGTGTCTCCGCTTGGA--------CTCT
ACATCCTGTGTGGTATCATATGATGACACCTTCAGAAATCTCTAGCGCTCCACCGAGAGGTGGCTCTAGTAGGGAGCACG
TGAATTTCAGGACAATAAACGAGCTGACACCAGCAGAAATCAAGGCAAGTTACCCCACAGTTTGTGTTTTCTACTGCTGC
AACGGGATGGACACGGCTGCCTGCTACGACGGTGAAATATATCTTTCTGGGAGAGCGCGACGACGTCTCACCTCCACTCC
ACGCAATCTCGTTCCGGAAGAAGAACCCAGTCGCAATTCGTAGATGACCGTTTCCCACGGCATCTGCAGGGCCCGGGGTA
CGAAATGATCTGGGTGGGAGCACACGTGAAGTACGAACGAGCGCGGGTACCACGAGCTCTCCAGCCCATCCGTCCACCCA
ACAACCAGGAAGCGGATCATGTCAAATCACGACGAAACCATAAAATAATCCTACAAACTGGGATCAGTAAGGTGGGCAAA
TGAT--AGTAC------AGAATCTAACAGATCATTTCGAATTCAGAGGCGGAAATTTTGCACATATACGTGACGATTTTG
TTAGAGAATTTTTTTCTTTCGAGCGGACGATTTTGGTAGAGATTTGTTTTTTCTCTTGAGCGGACGA-TTTTGTTACAGA
ATTTATAAATAGCTTAATCGCCTCATTTACACGTAGTCTGCACGTTTTAGGCATTTTTCCACGCTGGGAACTAGTACTGC
TGCGGCTAGTCGGCAGGGGCCCAGAGCTTAAGCGCACGCCTATATAGAACTGCTACCTAGGGAGTGTGGTGTGGTGTGGC
CTTGTGGGGGTGAGGTTCA-TCCGTCAGAGGCCAAATTGTTGGAGAGGCAGGGCAGAGGCTGGCCCCTCGCGAGGCTGTG
TGCCGGCGGGTAACAGCCACGGCGAGGCTGGGCGGCCGTCCCCGGCGTCCGGCGAAGCCCTTCGCCGGCCTCGGCGACAC
ACAGGCGAGGCAGCCGGCGACTCGGG------------GGCACCGGCAGATGGGGGCGCGCGTCATGGCGTGGTGGCGAG
CAAGGGTGGTCGCGTCCATGCGCCGCGCCTGCAGGCTCGCCGTGGCCGCCGCCCGCGCCCGCGTCCGCAAGGGAGGTACG
TGAGCCACCACCACTCGCTACTCTGCTTTTGTTGGAACTGCCACTGAAACGTGAACTGGATCGATGAACTTCATAGAAAC
A-------GTACAATGCAATCGACTCGTTTTCTTCGACTTTGCATGTTAGCATAGGCAGGCTCAAAGGTCTTGCAGGCAG
AGCAAACCTGCCATTCTTTGCTGAACCGGTGGATGTAGGCGTGCATCTAGCTAATGCGACCGAAAATTCATCATGACTGA
ACTAATTAATCTCCGAGACCAAATTTGCGGCAGCCGTCGTGCTTAGTTTTTTTTAGAGAAGACACTCAAATGGCATCTTA
TAGTACTATCTGATAATTATCAAGAATATACCCAATACTTAATGGAAAGACAATAAGATTCGTGGTCAGTTCATGGAACC
AGAAGATAGTAGCAGTGCTCCAAATAATTAGGTGAAGGGGCATTATCACAAGAAGCAAACAAAGGGATCAGAGAGATCGG
CCATGGTCCATGCGCCGATGCGCGGTATCTTTTTGCACGCTGCACACCAAAGGAAGGACCAGGGACACGTTATCTCGTGC
TTCCAACCGCTGAACCGCCCATTTGCATTACGTACTTTGGACCACCTATTCTAATCCGCAGCCCTTATGGTGGTTACGCG
GATACACCATCCACTCTTTTCTCTCTAAGACAGGAGTATCTAGTGGTAGTAACACAATGCATGTTGTATTTAAGTCACTT
ATTTTGAGGCGGAGGGAGTA-------------------------TTCAAGAGTACTAAGACACTGTTTTAATCTTTTCC
TTTTTGCGAATGTAGTAAATAGGAGTACTAACACGCTGCTTTAATCTTCGTGTATGGGATGAATGGTATGCAGAGTGCGG
GGTCCTGAACCTTCACCAGGACGTGCAGACGTGCGGCTACCACGACGTGCAGGTGATGTGGGACATGCTCAGCTCCGACA
AGGAGGCCGCTGCCGCCGCCTCGGCGCCGGCGAAGCAGCAGCAGCGGCGG---AAGAGGCCGTTCTGGAGGCTGGCTCCG
TCGTTCTGGCCCGCCCGGTCGCCGCGCGCCGCTGCAGCGCAGTGAGGCGAACGGCGTACGAGCTGCTGCCTGGCAATGTG
GACAGAACGCATATATCATGGCACCCTGCCGCTGCCATGCTGCTGCCTGCCATTGCGCCCCGAGTTCATGGCAATGATCC
CTGCGACCAGACCAGCCCGACCATGCATGTGTATACAAGATTTTTGTATAGTTGTTGGACAGAGCAATTTGCTTCCGCTC
TTATCTGGTGTTAATTTGACCGTGCTCTGGCTTGGACAGAGCAGTTTGGACTTTGGACTTTGCCCCCATCGACATAGTCT
TTGAC-CATCCTTATGCGGGGGCAGCT-----------------------------------------------------
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>SNPs
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--------------------------------------S-------S------------------SS--S--SS------
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------------------------------------------S--SSSSSSSSSS-------------------------
----------------------S---------------------------------------------------------
----------S------------S--------------------------------------------------------
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--------SSSSSSSSS------S-----S-----------S--------------------------------------
------------------------------------------------------SSSS--S--------------S----
----------------------------------S----S----------------------------------S-----
------S--------------------------------S----------------------------------------
---------------------------------S--------------------S--S--S---S---------------
-----------SS-------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------------------------------------------------S------
-------------------------------------------------------------------------------S
-SSSSSSS----------------S-------S-S---------------------------------------------
--------------------------------------------------------------S---S-------------
--S--------------------S--SS--S-------------------------------------------------
-----S--SSSSSS-----------------------S------------------------------------------
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------------------------S-------------------------------------------------------
-------------S--------------S-S--------S----------------------S-----------------
-----------------------------------------------S--------------------------------
-----------S----------------------S---------S-----------------------------------
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--------------------------------------------------SSS---------------------------
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-------S------------------------------------------------------------------------
------------------------------------------S--------------------------SSS--------
------------------S----------------------------------------------------------S--
S-SSSS----S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_795
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-------------------------------------------------------TTTCCACGCTGGGAACTAGC-----
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>reverse_2916
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-----------------------------------ACGTGGGATTGGAAGTTGGG-------------------------
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