>input_sequence_61434
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----------------ATGGAACCACCGCTGCCAACGACCGTGTCTACGTGCACCTCCGAGACGGCGAGGGGCAAGCACG
TGTTCAACATCGCCGGCTACCATCTGCACAAGGGTATGGGCGCCGGCGAGTCCATACGGTCCGCCACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGCTACTACCCCTATGGGGACATATCCCGGGACTGCAGGGGCTATGTCTCGGTCTACCTCGA
GCTCCTCACCAGGGACGCCGAGGTCAGGGCGGACTACGTGTTCAGGCTCATCGACAACTCGGGCAGCGCTCTGCCGTCGG
TGG------------TCCGCAGGTTTACCAGCAAGTACACCCCCGTCGACCCAGATGAAGATCCCGATGGCTATGGAGCT
AACAAGTTCATGAAACAGAGTGAGCTAGCAT------CGTACCTACGGGACGACCGCCTGGTGATTGAGTGTGAAGTCAA
GGTTATCAATGCTAAAACAAAAACTGAGGTGCAG---------------------------------GATGTGCCGCCCT
CGGACCTGCCGAATCATCTCGGGAAATTGCTGGATGGCAAGAGAGGAGCAGACGTGACTTTTGAGGTTGAAGGCGAGGTT
TTCTCTGCTCACAACTCACAAGATTATGCTCGCTACGCGATCGCGCCGGTCTTCGACGCTCAACTCTATGGACCCCTGAG
CGATGCCGGTGCTATGAG---TAAGAACATAATCGTCAAAGACATGGAGCCCCCTGTTTTCAAGGCGTTGCTTCACTTCA
TCTACACGGATTCTCTGCC---TGCTATGGATGACGCTGATGATGGTGAGAGTGAAGACATGGTTAAGCACTTGCTCGTG
GCTGCCGATAGGTATGCCATGGACAGGATGAAGATGATGTGTGAAGATATTCTATGCAAGAGCCTTGATGTCGAGACTGC
GGCGACCACGTTGGCTCTAGCTGATCAGCATCACTGCAGCAAGCTAAAAGATGCTTGTGTTGAATATATCCTCTCTTCAA
ACAGACTGAATGCTGTGGTGGCAAGCAGAGAGTACGCACACCTCAAAAGATCATGTCCTGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGGAAAATTTAA--------------------------------------------------
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>chr3A_1_TraesCS3A01G020200
TCGGTCGGGGCAGACGATCTACTGGCGGTGCTGCGGCCAAACGATGCCCGGCGGGAGGAATTCCGGCGGGATGTTGGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCCGGATGGGTTCGCCGTCCTGAAGTTCTCCCACCGTGCAGCCTGACGT
GGATCCGCCGACTCCGCCTCCTAGATCGCCCAGAAGAGGAGCTCCAGATCCTCGCAGCCGTCGTCTCCGGTGAAGCGCGC
GCGCTCGACGAAGCTCACATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAACGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGCGCCGCCGCAGGTGGCGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGCGCTAGCCGGCGAACCCGCACACCGCGGCGACGTGCCCCAGCCATGGTTGC
TCTGGGATGGGGATTGGCGGCGGGGAGAGCTCGGTGAGATGTGAGGGTGGGTGGGAAGCTGGGGGTTGGGGCGCCTTAAT
GGCGTCAAGGTTGCTTCGCCCGAGGGGGAGGGG--GGGA---GGGGAAGGAGAGCGAGCCATTCTCACTTCCAATATTGG
ATGATTACTTCCGCAAATGAAGATGTGTCAGGAGGAAGGGATTTAGCTTTTAATATACATAGTAAATAAAAAAAGATACT
CCATAATTTCCAGGCGTTGACAAGCTGGTTTTCTTTAGGGAAATGTAGAGGTGGTTCTTTTAGCAAAATGTACTGCTGGT
TTTGT-TTTTTTGAGAAAAAAATTACTGCTGGTTATGTGCACTGATGGAGATGTTGTAGCAAGTGGGCCAAGCTCTCCGG
TTGA--TGGGCCTCCGC-------TTGTGC-----------------TTGCTTCTTGTAGC---TCTTCTGTGCCCTCGC
ATT--CCCCATTCCCTCTGAAAATATCCCCACCTGCGCCGCCGCCAT-------------------CGCCGCCGCCGCAC
AAACTGGCTAGCAGCAATGGAACCACCGCTGCCAACGACCGTGTCTACGTGCACCTCCGAGACGGCGAGGGGCAAGCACG
TGTTCAACATCGCCGGCTACCATCTGCACAAGGGTATGGGCGCCGGCGAGTCCATACGGTCCGCCACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGCTACTACCCCTATGGGGACATATCCCGGGACTGCAGGGGCTATGTCTCGGTCTACCTCGA
GCTCCTCACCAGGGACGCCGAGGTCAGGGCGGACTACGTGTTCAGGCTCATCGACAACTCGGGCAGCGCTCTGCCGTCGG
TGG------------TCCGCAGGTTTACCAGCAAGTACACCCCCGTCGACCCAGATGAAGATCCCGATGGCTATGGAGCT
AACAAGTTCATGAAACAGAGTGAGCTAGCAT------CGTACCTACGGGACGACCGCCTGGTGATTGAGTGTGAAGTCAA
GGTTATCAATGCTAAAACAAAAACTGAGGTGCAG---------------------------------GATGTGCCGCCCT
CGGACCTGCCGAATCATCTCGGGAAATTGCTGGATGGCAAGAGAGGAGCAGACGTGACTTTTGAGGTTGAAGGCGAGGTT
TTCTCTGCTCACAACTCACAAGATTATGCTCGCTACGCGATCGCGCCGGTCTTCGACGCTCAACTCTATGGACCCCTGAG
CGATGCCGGTGCTATGAG---TAAGAACATAATCGTCAAAGACATGGAGCCCCCTGTTTTCAAGGCGTTGCTTCACTTCA
TCTACACGGATTCTCTGCC---TGCTATGGATGACGCTGATGATGGTGAGAGTGAAGACATGGTTAAGCACTTGCTCGTG
GCTGCCGATAGGTATGCCATGGACAGGATGAAGATGATGTGTGAAGATATTCTATGCAAGAGCCTTGATGTCGAGACTGC
GGCGACCACGTTGGCTCTAGCTGATCAGCATCACTGCAGCAAGCTAAAAGATGCTTGTGTTGAATATATCCTCTCTTCAA
ACAGACTGAATGCTGTGGTGGCAAGCAGAGAGTACGCACACCTCAAAAGATCATGTCCTGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGGAAAATTTAACTGCTCTTGGAAGTAT----------------------------------
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----------------------------CCCTGCCTTTGGTATC---------------ATTTAATGGTGTAAACACTTC
CCTGAAAAAAGTCTGAAGGCAAACAGGGTTCCAGAGAGGTGTGAACTTAGCAGTTGAGTTGAGATACAATATAAATGAAA
ATGGTGATCATCTTCTAATTCTTGATCATGCCGGATTCGGACTTTCCTGACGTAATTTGCAGCTTGGTCGACGTCCCTAC
TCCCGATGCAGTCACCTTTCTTGTTAAC--AGAAGAAGAAGCAACTAAACCGAACAAGTCC-TCTGCTCCACTTACATAG
TATATTAGCATATCCTAATCCAGTCGCATAGCACATCCTGCTCTGACCTCGGATCACTACCACTCAAC--AAATAAGAAA
ATGTTGCTCATAAACTCCCGACTAAACAAGTTTCGGCTATCAGCTGCGAAAGAAAATGCGGCTCACTGGTCTCCCTTCGC
GGCGTCCATGTCACTCACGTCGACATCATCCAAGCTCCTCTTGCTATCCTTCAC-GGTGTTCTTCAGACGGCGTTTCTGT
TTCAAAC-AAAACACAGCAAGGATTAGGATGAAGATAACTAAGCACCCAAACATCAAATGAACTAGTTTATGGCTAGTAA
GACGGGTATCAACTATT-----ATAAGGCACTAAAAAGCCAAAATGATGCAGTTCTTTCGGCAAAATGGATGAAACGCCT
AGGTATCACAAACTTCTCCAGGCCAAGGAAACCTGGTTTTATGCCATG------------------GGAGGGAAATCATC
ATGAAGTTAAATCTAAATCAGAAGACATGCATAAAGACCGCGTGAAATATGAAATCAACGGCTGAAATCTGTGCGCACAT
ACGAATTCAAAGGATGTTTAAATCTGTGCGCCGACATGGAGCGTCAGGAGATGGATAGGTGGAGTGGCGGCGGCTGATGG
TTGGCACCGGAGGAGATGGGAGAAGGGTACTAGGGTTAGGCTGGTGTGGAATCGTAGTTAAATGGGCTGGCTTGAAAATT
TCGACTCCCCGGGCTGG
>chr3A_1
TCGGTCGGGGCAGACGATCTACTGGCGGTGCTGCGGCCAAACGATGCCCGGCGGGAGGAATTCCGGCGGGATGTTGGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCCGGATGGGTTCGCCGTCCTGAAGTTCTCCCACCGTGCAGCCTGACGT
GGATCCGCCGACTCTGCCTCCTAGATCGCCCAGAAGAGGAGCTCCAGATCCTCGCAGCCGTCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGCTCACATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAACGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGCGCCGCCGCAGGTGGCGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGCGCTAGCCGGCGAACCCGCACACCGCGGCGACGTGCCCCAGCCATGGTTGC
TCTGGGATGGGGATTGGCGGCGGGGAGAGCTCGGTGAGATGTGAGGGTGGGTGGGAAGCTGGGGGTTGGGGCGCCTTAAT
GGCGTCAAGGTTGCTTCGCCCGAGGGGGAGGGG--GGGA---GGGGAAGGAGAGCGAGCCATTCTCACTTCCAATATTGG
ATGATTACTTCCGCAAATGAAGATGTGTCAGGAGGAAGGGATTTAGCTTTTAATATACATAGTAAATAAAAAAAGATACT
CCATAATTTCCAGGCGTTGACAAGCTGGTTTTCTTTAGGGAAATGTAGAGGTGGTTCTTTTAGCAAAATGTACTGCTGGT
TTTGTTTTTTTTGAGAAAAAAATTACTGCTGGTTATGTGCACTGATGGAGATGTTGTAGCAAGTGGGCCAAGCTCTCCGG
TTGA--TGGGCCTCCGC-------TTGTGC-----------------TTGCTTCTTGTAGC---TCTTCTGTGCCCTCGC
ATT--CCCCATTCCCTCTGAAAATATCCCCACCTGCG---------T-------------------CGCCGCCGCCGCAC
AAACTGGCTAGCAGCAATGGAACCACCGCTGCCAACGACCGTGTCTACGTGCACCTCCGAGACGGCGAGGGGCAAGCACG
TGTTCAACATCGCCGGCTACCATCTGCACAAGGGTATGGGCGCCGGTGAGTCCATACGGTCCGCCACCT-----------
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-----------------
>chr3B_1
TCGGTCAGGGCAGACGATCTACTGGCGGAGCTGCGGCCAGACGATGCCCGGCGGAAGGAATTCCGGCGGGATGTTAGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCTAGATGGGTTCGCCGTCCTGAAGTTCTCCCACCGCGCAGCCTGATGC
GGATCCGATGACTCCGCCTCCTGGACCGCCCAGAAGAGGAGCTCCGGATCCTCGCAGCCGTCGTCTCCGATGAAGCGCGC
GCGCTCGATGAAGTTCGCATGGTGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCTCGGTCGGGGAAGCGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGACGCCGCCACAGGCGGTGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGTGCTAGCCGGCGAACCCGCACGCCGCGGCAACGCGCTCCAGCCATGCGGGA
TCTGAGGTGGGGATCCAGGGCGGGGAGAGCTCGACGAGATGTGAAGGTGGGTGGGACGCTGGGGGTTGGGGCGCTTCAAT
GGCGTCGACGTTGCTTCGCCCGAGGGGGAGGGGAAGGGA---GGGGAAGGAGAGCGGACCATCTCTC-------------
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-----------------
>chr2D_1
TCGGTCGGGGCAGACGATCTACTGGCGGCGCTGCGGCCAAACGATGCCCGGCGACAGGAATTCCGGCGGGATGTTGGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCTGGATGGGTTCGCCGTCCTGAAGTTCTCCCACCGTGCAGCCTGATGC
GGATCCGATGACTCCGCCTCCTGGATCGCCCAGAAGAGGAGCTCCAGATCCTCGCAGTCGTCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGTTCGCATGGCGGAGGGTGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAGCGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGCGCCGCCGCAGGCGGTGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGTGCTAGCTGGCGAACCCGCACGCCGCGGGGACGCGCTCCAGCCATGCGGGA
TCTGAGATGGGGATTCGGGGCGGGGAGAGCTCGACGAGATGTGAGGGTGGGTGGGAAGCTGGGGGTTGGGGCGCTTTAAT
GGCGTCGAAGTTGCTTCGCCCGAGGGGGAGGGGAAGGGA---GGGGAAGGAGAGCGAGCCAT------------------
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-----------------
>chr1D_1
TCGGTCGGGGCAGACGATCTACTGGCGGCGCGGCGGCCAAACGATGCCCGGCGGGAGGAATTCCGGCGGGATGTTGGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCTGGATGGGTTCGCCATCCTCAAGTTCTCCCACCGCGCAGCCTGATGC
GGATCCGACGACTCGGCCTCCTGGATCGCCCAGAAGAGGAGCTCCAGATCCTCGCAGCCATCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGTTCGCATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAGCGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCAGCGCCGCCGCAGGAGGTGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGTGCTAGCCGGCGAACCCGCACGCCGCGGCGACGCGCTCCAGCCATGCGGGA
TCTGAGATGGGGATTCGGGGCGGGGAGAGCTCGGCGAGATGTGAGGGTGGGTGGGAAGCTGGGGGTTGGGGCGCTTTAAC
GGCGTCGAAGTTGCTTCGCCCGAGGGGGAGGGGGAGGGA---GGGGAAGGAGAGCGAGCCATCTC---------------
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-----------------
>chr2B_1
TCGGTCGGGGCAGACGATCTACTGGCAGCGCTGCGGCCAA-CGATGCCCGGCGGAAGGAATTCCGACGGGACGTTGGCGA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCTGGATGGGTTCGCCATCCTGAAGTTCTCCCACCATGCAGCCTGATGC
GGATCCGACGACTCCGCCTCCTGGATCGCCCAGAAGAGGAGCTACAGATCCTCGCAGCCGTCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGTTCGCATGGCGAAGGATGTGGAGGTGGATCTCCCCCGACTCGTCCCGGTCGGGGAAGAGCTCCATCA
CCACCCGACGCATCTCGCAGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGTGCCGCCGCAGGCGGTGGAAGC
GCCCCCGGTTCCGCTACCCTCGCCACCGGTGCTAGCCGGCGAACCCGCACGCCGCGGCGACGCGCTCCAGCCATGCGGGA
TCTGAGATGGGGATCCGGGGCGGGGAGAGCTCGACGAGATGTGAGGGTGGGTGGGACGCTGGGGATTGGGGCGCTTTAAT
GGTGTCGACGTTGCTTCGCCCGAGGGGGAGGGGAAGGGA---GGGGAAGGAGAGCCAGCCATCCTC--------------
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-----------------
>chr7D_1
TCGGTCGGGGCAGACGATCTACTGGCGGCGCTGCAGCCAAACGGTGCCCGGCGGAAGGAATTTCGGCGGGATGTTGGCGA
TGCCCTCCCACGAAGGTGGCCTGATGTTGAGCCTGGATGGGTTCGCCGTCCTGAAGTTCTCCCACCGCGCGGCCTGACGC
GGATCCGACGACTCCGCCTCCTGGATCACCCAGAAGAGGAGCTCCAAATCCTCGCAGTCGTCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGTTCGCATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCTGGTCGAGGAAGCGTTCCATCA
CCACCCGATGCATCTCACAGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGCGCCGCCGCAGGCGGTGGAAGC
TCCCGCGGTTCCACTACCCTCGCCACCGGCGCAAGCCAGCGAACCCACACGCCGCGGCGACGCGCTCCAGCCATGCGGGA
TCTGAGATGGGGATTCGGGGCGGGGAGAGCTCGGTGAGCTGCAGGGGTGGGTGGGAGGCT-GGGGTTGGGGCGCTTTAAT
GGCGCCGTAGTTGCTTCGCTCGAGGGGGAGGGGAGGGGA---GGGGAAGGAGAGCGAGCCAT------------------
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>chrUn_1
TCGGTCGAGGCAGACGATCTACTGGCGGCGCTGCGGCCAAACGATGCCCGACGGAAGAAATTCCGGCGGGATGTTGGCGA
TGCCCTCCCATGATGGCGGTCTG-TGTTGAGCCTGAATGGGTTCGCCGTCCTGAAGTTCTCCCACCGCGCAGCCTGACGC
GGATCCGATGACTCAGCCTCCTGGATCACCCAGAAGAGGAGCTCCAAATCCTCGCAGCTGTCGTCTCCGATGAAGCGCGC
GCGCTCGACGAAGTTCGCATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAGCGCTCCATCA
CCACCCGACGCATCTCGCCGCGAGCCTCCGGCGAGTGTGGGTCGATCTCGAACAGCGGCGCCGCCACAGGCGGTGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGTGATAGCCGGCGAACCCGCACGCCACGGCGACGCGCTCCAGCCATGAGGGA
TCTGAGATGGGGATCTGGGGCGGGGAGAGCTCGATGAGATGTGAGGGTGGGTGGGACGCTGGGGGTTGGGGTGCTTTAAT
GACGCCGACGGTGCTTCGCCCGAG--------------------------------------------------------
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-----------------
>chr4B_9
--------GGTAGACGAACTACTGGCGGCACGGCGGCCAAATGGTGTCCGGCGGAAGAAATTCCGGCGGGATGTTGGCCA
TGCCCTCCCACGATGGCGGCCTGATGTTGAGCCTGGATGGATTCGCCGTCCTGAAGTTCTCCCACCGTGCAGCTTGACGC
GGATCCGACGACTCCGCCTCCTGGATCGCCCAGAAGAGGAGCTCCAAATGCTCGCAGTCGTCGTCTCCGATGAAGCGCGC
ACGCTCGACGAAGTTCGCATGGCAGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCTGGTCGGGGAAGCACTCCATCA
CCACCCGCTGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGTAGCGGCGCCGTCGCAGGCGGTGGAAGC
GCCCGCGGTTTCGCTACCCTCGCCACCGGCGCAAGCCGGCGGACCCGCACGCCGCGGCGACGCGCCCCAGCCATGGGAGA
TCTGAGATGGGGATTTGGGGCGGGGAGAGCTCGACGGGATGTGAGGGTGGGTGGGATGCTGAGGGTTGGTGCGCTTTAAT
GGCGCCGATGTTGCTTCGCCCGAGGCGGAGGGGGAGGGGGAGGGGAAGGGAGAGCGAGCCAT------------------
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>chr3A_231
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----------------------------------------------------------------------TGAAGCGCGC
GCGCTCGACGAAGCTCACATGGCGGAGGATGTGGAGGTGGATCTCCCCCCACTCGTCCCGGTCGGGGAAACGCTCCATCA
CCACCCGACGCATCTCGCGGCGAGCCTCCGGCGAGTGCGGGTCGATCTCGGGCAGCGGCGCCGCCGCAGGTGGCGGAAGC
GCCCGCGGTTCCGCTACCCTCGCCACCGGCGCTAGCCGGCGAACCCGCACACCGCGGCGACGTGCCCCAGCCATGGTTGC
TCTGGGATGGGGATTGGCGGCGGGGAGAGCTCGGTGAGATGTGAGGGTGGGTGGGAAGCTGGGGGTTGGGGCGCCTTAAT
GGCGTCAAGGTTGCTTCGCCCGAGGGGGAGGGGG--GGA---GGGGAAGGAGAGCGAGCCATTCTCACTTCCAATATTGG
ATGATTACTTCCGCAAATGAAGATGTGTCAGGAGGAAGGGATTTAGCTTTTAATATACATAGTAAATAAAAAAAGATACT
CCATAATTTCCAGGCGTTGACAAGCTGGTTTTCTTTAGGGAAATGTAGAGGTGGTTCTTTTAGCAAAATGTACTGCTGGT
TTTGTTTTTTTNNNNNNNNNN-----------------------------------------------------------
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------------CCCTCTGAAAATATCCCCACCTGCGCCGCCGCCAT-------------------CGCCGCCGCCGCAC
AAACTGGCTAGCAGCAATGGAACCACCGCTGCCAACGACCGTGTCTACGTGCACCTCCGAGACGGCGAGGGGCAAGCACG
TGTTCAACATCGCCGGCTACCATCTGCACAAGGGTATGGGCGCCGGCGAGTCCATACGGTCCGCCACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGCTACTACCCCTATGGGGACATATCCCGGGACTGCAGGGGCTATGTCTCGGTCTACCTCGA
GCTCCTCACCAGGGACGCCGAGGTCAGGGCGGACTACGTGTTCAGGCTCATCGACAACTCGGGCAGCGCTCTGCCGTCGG
TGG------------TCCGCAGGTTTACCAGCAAGTACACCCCCGTCGACCCAGATGAAGATCCCGATGGCTATGGAGCT
AACAAGTTCATGAAACAGAGTGAGCTAGCAT------CGTACCTACGGGACGACCGCCTGGTGATTGAGTGTGAAGTCAA
GGTTATCAAGCAGCCGC---------AGGTGAAGGAGGAGGAGACCGTCTCCGTCGCCGCACATATTGAGGTGCCGCCGT
CGTACCTGCCGAATCATCTCAAGAAATTGCTGGATGGGAGGAGAGGGGCAGATGTGACTTTTGAGGTTAAAGGCGAGGTT
TTCCCTG-------CTCACAAGATTATGCTCGCCACGCGATCGC--CGGTCTTTGATGCTCAACTCTATGGACCCCTGAG
CGATCCTG------CGAG---TGACAACATAATCGTCGAAGACATGGAGCCTCCTGTTTTCAAGGCGTTTCTTCACTTCA
TCTACACAGATTCGCTGCCTGCTGCTATGGATGACCTTGATGATGGTGAGAACCAAGAGATGGTTAAGCACCTGCTGGTG
GCCGCCGATAGGTATGCCATGGACAGGATGAAGATGTTATGCCAAGGTATTCTCTGCAAGAGCCTTGATGTTCAAACTGT
GGCGACAACATTGGCGCTAGCTGATCAGCATCACTGCAGCAAGCTGAAAGATGCATGTGTTGAATTCATCCTCTCTTCAA
ACAGAATGGATGATGTGGTGGCAAGCCAAGGGTATGCGCACCTCAAAAGATCTTGTCCTGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGCAAAATTTAA--------------------------------------------------
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>chr3B_831
GTGGACTGG-----------------------------------------------------------------------
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----------------------------------------------GGAGATGCTTTTGCAAGTAGGCCGAGATCTCCAG
TTGA--TGGGCCTCAGC-------CTGTGC-----------------TTGCTTCT----------CTTCTGTGCCCTCGC
ATT--CCCCATCCCCTCTGGAAATATCCCCACCCGCGCCGCCGCCGACA-CCCACCCCACCGCCGCCGCCGTCGCCGCAC
AAAGCT----CGAGCAATGGAACAATCGCTGCCAACGACCGTGTCTACGTGCACCCCCGACACGGCGATGGGCAAGCACG
TGTTCAAGATCGTCGGCTACCATCTGCACAAGGGTTTGGGCGTCGGCAAGTACATACGGTCCGCCACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGTTACTACCCCGATGGATACTCATCCCCCGAGTGCAATGGCTACATCTCTGTCTACCTCGA
GCTCCTCTCCAGGAACGCCGAGGTCAGGGCGAACTACACATTCAGTCTAATCGAC---TCGGGCGGCGGCGGCGCGCAGC
CATGGTCGCCGTTCATCCGCCGCTTCGCTCACAACTACACCTCCGTCGA---------------TGCTTGCTATGGAGCT
GACATGTTCATCAAACAGAGTTCGCTCGAATCGGTGCCGTACCTGCGGGACGACACCGTGGTGATTGAGTGTGAGGTCAA
GGTTATCAGGTGCCCGC---------AGGTGCAGGAGGAGT---CCGTGCTGGCCGCTTCACATATCGAGGTGCCGCCCT
TGGATCTGCCGAACCACCTCAGAAAGTTGCTGGATGGAAAGAGAGGAGCAGATGTGACTTTTGAGGTTAAAGGCAAGGTT
TTCCCTG-------CACACAAGATTATGCTCGCCACGCGATCGC--CGGTCTTCGATGCTCAGCTCTATGGACCCATGAG
CGATGCCAATGCCACAAG---TAGGAACATAATCATCGAGGATATGGAACCCCCTGTTTTCAGGGCCTTGCTTCACTTCA
TCTACACGGATTCGCTGCC---GGCTATGGATGACCTTGATGATGGTGAGAACCAAGAGATGGTTAAACACTTGCTGGTG
GCTGCCGACAGGTATGCCATGGACAGGATGAAGATGATATGTGAAGGTATTCTCTGCAAGAGCCTTGACGTTGAGACCGT
GGCGACGACATTGGCGCTAGCTGATCAGCATCACTGCAGCAAGCTGAAAGATGCCTGTGTTGAATTCATTCTCTCTTCAA
ACAGAATGGATGATGTGGTAGCAAGCCAGGGGTATGCACACCTCAAACGATCTTGTCATGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGCAAAATTTAA--------------------------------------------------
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>chr3D_836
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-----------------------------------------CTGGTGTAGATGCTGTTGCAAGTGGGCCAAGATGTCCGG
TTGA--TGGGCCTCCGCCTAAAATTTGTTG-----------------CTGCTTCTTGTTGCTTTTCTTCTCTGCCCTCGC
ACTCCCCCCATCCCCTCTGAAAATATCCCCACCTGCGCCGCCGCGGACACCCCACCCCACCGCCGCCGCCGTCGCCGCAC
GCAGCT----TGAGCAATGGAACAATCGCTGCCGACGACCGTGTCTACGTGCACCTCCGACACGGCGATGGGCAAGCACG
TGTTCAAGATCGTCGGCTACCATCTGCACAAGGGTTTGGGCGTCGGCAAGTACATACGGTCCGCAACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGTTACTACCCCGATGGATACTCATCCCCAGAGTGCAATGGCTACATCTCTGTCTACCTCGA
GCTCCTCACCAGGAACGCCGAGGTCAGGGCGAACTACACATTCAGTCTAATCGAC---TCGGGGGGCGGCGGCGCGCAGG
CATGGTCGCCGTTCATCCGCCGCTTCGCTCACAACTACACCTCCGTCGA---------------TGTCAGCTATGGAGCT
GACATGTTCATCAAACAGAGTGCGCTCGAATCGGTGCCATACCTGCGGGACGACACCGTGGTGATTGAATGTGAGGTCAA
GGTTATCAGGTGGCCGC---------AGGTGCAGGAGGAG---ACCGTGTTGGCCGCCACACATATCGAGGTGCCACCGT
CGGACCTGCCGAATCACCTCAGAAATTTGCTGGATGGGAAGAGAGGAGCAGATGTGACTTTTGAGGTTAAAGGCGAGGTT
TTCCCTG-------CTCACAAGATTATGCTCGCCACGCGATCGC--CCGTCTTTGATGCTCAACTCTATGGATCCATGAG
CGCTGCCAATGCCACGAGTAATAAGAACATAATCGTCGAAGACATGGAGCCCCCTGTTTTCAGGGCCTTGCTTCACTTCA
TCTACACGGATTCGCTGCC---CGCTATGGATGACCTTGATGATGGTGAGAACCAAGAGATGGTTAAGCACTTGCTGGTG
GCTGCCGACAGGTATGCCATGGACAGGATGAAGATGATATGTGAAGGTATTCTCTGCAAGAGCCTTGACGTTGAGACCGT
GGCGACGACATTGGCGCTAGCTGATCAGCATCAATGCAGCAAGCTGAAAGATGCCTGTGTTGAATTCATCCTCTCTTCAA
ACAGAATTAACGATGTGGTGGCAAGCCAGGGGTATGCACACCTCAAACGATCTTGTCCTGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGCAAAATTTAA--------------------------------------------------
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>chr3B_836
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-----------------------------------------CTGGTGTAGATGCTGTTGCAAGTGGGCCAAGATGTCCGG
TTGAGATGGGCCTCCGC-------CTAAAATTTCTTGCTGCTTCTTGTTGCTTTT----------CTTCTATGACCTCGC
ACT--CGCCATCCCCTCTGAAAATATCCCCACCTGCGCCGCCGCCGACACCCCACCCCACCGCCGCCGCCGTCGCCGCAC
AAAGCT----CGAGCAATGGAACAATCGCTGCCAACGACCGTGTCTACGTGCACCTCCGACACGGCGATGGGCAAGCACG
TGTTCAAGATCGTCGGCTACCATCTGCACAAGGGTTTGGGCGTCGGCAAGTACATACGGTCCGCCACCTTCGCCGTCGGC
GGCTACGACTGGTGCGTCCGTTACTACCCCGATGGATACTCATCCCCCGAGTGCAATGGCTACATCTCTGTCTACCTCGA
GCTCCTGTCCAGGAACGCCGAGGTCAGGGCGAACTACACATTCAGTCTAATCGAC---TCGGGCGGCGGCTGCGCGCAGC
CATGGTCGCCGTTCATCCGCCGCTTCGCTCACAACTACACCTCCGTCGA---------------TGTTAGCTATGGAGCT
GACATGTTCATCGAACAGACTGCGCTCGAATTGGTGCCGTACCTGCGTGACGACACCGTGGTGATTGAGTGTGAGGTCAA
GGTTATCAGGTGGCCGC---------GGGTGCAGGAGGAG---ACCGTGTTGGCCGCCACACATATCGAGGTGCCACCGT
CGGACCTGTCGATTCACCTCGGGAAGTTGCTGGACGGGAAGAGAGGAGCAGATGTGACTTTTGAGGTTAAAGGCGAGGTT
TTCCCTG-------CACACAAGATTATGCTTGCCACGTGGTCGC--CGGTCTTCGATGCTCAAGTCTATGGACCCATGAG
CGATGCCAATGCCACGAG---TAAGAACATAATCGTCGAAGACATGGAGCCCCCTGTTTTCAGGGCCTTGCTTCACTTCA
TCTACACGGATTCGCTGCC---AGCTATGGATGACCTTGATGATGGTGAGAACCAAGACATGGTTAAACACTTGATGGTG
GCTGCCGACAGGTATGCCATGGACAGGATGAAGATGATATGTGAAGGTATTCTCTGCAAGAGCCTTGAAGTTGAGACCGT
GGCGATGACATTGGCGCTAGCTGATCAGCATCACTGCAGCAAGCTGAAAGATGCCTGTGTTGAATTCATTCTCTCTTCAA
ACAGAATGGATGATGTGGTAGCAAGCCAGGGGTATGCACACCTCAAAAGATCTTGTCCTGCTCTCATGTTTGATGTCTTT
GAGAAGGCTACCAAGTCTCGCAAAATTTAA--------------------------------------------------
--------------------------------------------------------------------------------
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>chr3A_971
--------------------------------------------------------------------------------
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------------------------------------------------------------------CGCCGCCACCGCAC
A-AACT----GCAGCGATGGAATCATCGGTGCCAATGGCTGTGTCGACGTGCACCTCCGAGACGGCGACGGGCAAGCACG
TGTTCAGGATCGCCGACTACCATATACGCAAGGGTTTGGGCGTCGGCGAGTACATACAGTCCGCCACCTTCGCCATCGGC
GGCTACGACTGGCGCGTTCGCTACTACCCCAATGGAGCCATATTCCCGGAGTGCAGCGGCTATGTCTCGGTCTACCTCGA
GCTCCTCACCAGGGACGCCAAGGTCAGGGCGGACTACGAGTTCAGGCTCATCGAC---TCGGGTAGCACGCCACCGCCGT
CGCCAGTGACACATCT------GTTTACTAACAAGTACAACACAGTCGACCCGGATGAAGCACCTGCTAACTATGGAGCT
CCCAGGTTTATGAAACAGCAGGAGATAAAA------CCGTACCTGCGGGACGACTGCCTGGAGATTGAGTGTGAAGTCCT
CGTTATCAATGCTATAACAAAACTTGAGGTGCAG---------------------------------GAGGTGCCGCCCT
CGGACCTGCCGAATCATCTCGGAAAATTGCTGGATGGCAAGAGAGGAGCAGATGTGACTTTTGAGGTTAAAGGCGAGGTT
TTCTCTG-------CTCACAAGATTATGCTCGCCACGCGATCGC--CGGTCTTCGACGCTCAACTCTATGGACCCCTGAG
CGATGCTGATGCTACGAG---TAAGAACATAATCGTCAAAGACATGGAGCCCCCTGTTTTCAAGGCGTTGCTTCACTTCA
TCTACACGGATTCTCTGCC---TGCTATGGATGACGTTGATGATGGTGAGAGTGAAGACATGGTTAAGCACTTGCTCGTG
GCTGCGGATAGATATGCCATGGACAGGATGAAGTTGATGTGTGAAGATATTCTATGCAAGAGCCTTGATGTCGAGACTGC
GGCGACCACGTTGGCTCTAGCTGATCAGCATCACTGCAGCAAGCTGAAAGATGCTTGTGTTGAATATATCCTCTCTTCAA
ACAGACTGAATGCTATGGTGGCAAGCAAAGGGTACGCACACCTCAAAAGATCATGTCCTGCTCTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGGAAAATTTAACTGCTCTTGGAAGTAT----------------------------------
--------------------------------------------------------------------------------
----------------------------CCCTGCCTTTGGCATC---------------ATTTAATGGTGTAAACACTTC
CCTGAAAAAAGTCTGAAGGCAAACAGGGTTCCAGAGAGGTGTGAACTTAGCAGTTGAGTTGAGATACAATATAAATGAAA
ATGGTGATCATCTTCTAATTCTTGATCATGCCGGATTCGGACTTTCCTGACGTAATTTGCAGCTTGGTCGACGTCCCT--
----GATGCAGTTACCTTTTTTGTTAAC--AGAAGAAGAAGCAACTAAACCAAACAAGTCT-TCTGCTCCACTTACATAA
CATATTAGCATATCCTAATCCAGTC-CATACCACATCCCGATCTTACCTCGGATCGCTACCACTCGACAAAAAGAAGAAA
ATGTTGCTA-------------------------------------CGAAGGAAAATGTGGCTCACTG------------
----------------ATGTAGACATCATCCAAG-TCCTCTTGCTATCCTTTACGGGTGTACTTGAGACGGTGTTTCTGT
TTCAAACAAAAACACAACAAGGATTAGGATGAAGATAACTTAGCATCAATCA-----------------ATGGTTAGTAC
GATGGCTGTCAACTATCATATCATATGGCACTAAAAAGCCAAAATGATGCAGTTGTTTC---------------------
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>chr3D_971
--------------------------------------------------------------------------------
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------------------------------------------------------------------CGCCGCCACCGCAC
A-AACT----GCAGCGATAGAATCATCGGTGCCAATGACTGTGTCGACGTGCACCTCCGAGACGGTGACGGGCAAGCACG
TGTTCAGGATCGCCGACTACCATATACGCAAGGGTTTGGGCGTCCGCGAGTACATACAGTCAGCCACCTTCGCCATCGGC
GGCTACGACTGGTGCGTTCGCTACTACCCCGACGGAGA---AACCCAGGATTGCAGGGGCTACGTCTCCATCTTCCTTGA
GCTCCTGACCAGGAACGCCAAGGTTAGGGCTGAGTATGAATTCAGGCTCGTCGAC---TCGGGCAGCGCGCTGCCGCCGT
CGCCAGTGACACATCT------GTTTACTAACAACTACAACACAGTCGACCCGGATGAAGATCCTGCTAGCTATGGAGCT
CATAGGTTTATGAAACAGCAGGAGGTAAAA------CCGTACGTGCGGGACGACTGCCTGGAGATTGAGTGTGAAGTCGT
CGTTATCAATGCTATAACAAAACTTGAGGTGCAG---------------------------------GATGTGCCGCCCT
CGGACCTGCCGAATCATCTCCGGAAATTGCTGGATGGCAAGAGAGGAGCAGATGTGACGTTTGAGGTTGAAGACGAGGTT
TTCTCTG-------CTCACAAGATTATGCTCGCGACGCGATCAC--CGGTTTTCGATGCTCAGCTCTATGGACCTCTGAG
TGATT------CCATGAG---TAAGAACATAATCGTCAAAGACATGGAGCCCCCTGTTTTCAAGGCATTGCTTTACTTCA
TCTACACGGATTCTCTGCC---TGCTATGGATGACGCTGATGATGGTGAGAGTGAAGACATGGTTAAGCACTTGCTCGTG
GCTGCCGATAGGTATGCCATGGACAGGATGAAGATGATGTGTGAAGATATTCTATGCAAGAGCCTTGATGTCGAGACCGT
GGCAACCACGTTGGCTCTAGCTGATCAGCATCACTGCAGCAAGCTGAAAGATGCTTGTGTTGAATATATCCTCTCTTCAA
ACAGACTGAATGCTGTGGTGGCAAGCAAAGGGTACGCACACCTCAAAAGATCATGTCCTGCTCTCATGTTTGATCTCTTT
GAGAGGGCTACCAAGTCTCACAAAATTTAACTGCTCTTGGAAGTGTTTAATTACACCATTAAATGATACTCCCTCCGATT
CAAAATAAGTGTCGCAGCTATGAACTAAGGTTAGTTCGACATTAGTTCAAAACTGCGACACTTATTATGGATCGGAGGGA
GTATAAAAGGCAGGCATCCTAGGCTTGCCCCCGCCTTTGGTTTGTAACAGTATCATTTAATATAACGGTGTAAACACTTC
TTCGAAAAAAGTCTGAACGCAGACAGGGTTTCAAAGAGGTGTAAACTTAGAAGTTGAGTTGAGATACAATATAAATGAAA
ATGGTGATCATCTTCTAATTCTGGATCATGCCAGATTCGGACTTTCCTGACGTAATTTGCAGCTTGGTCGACGTCCCT--
----GATGCAGTCACCTTTTCGCTAACAGAAGAAGAAGAAGCAACTAAACCGAACAAGTCTATCTGCTCCACTCACATAA
CA---TAGCATATCCTAATCCAGTCACATACCACATCATGCTCTGACCTAGGATCACTACCACTCAAC--AAATAAGAAA
ATATTGCTCATAAACTCCCGACTAAACAAGTTTCAGCTATCAGCTGCGAAAGAAAATGCGGCTCACTGGTCTCCCTTCAC
GGCGTCCATGTCATTCACGTAGACATCATCCAAGCTCCTCTTGCTATCCTTCAT-GGTGTTCTTCAGACGGCGTTTCTGT
TTCAAAC-AAAACACAGCAAGGATTAGGATGAAGATAACTAAGCACCCAAACATCAAATGAACTAGTTTATGGCTAGTAA
GATGGCTATCAACTATT-----ATATGGCAGTAAAAAGCCAAAATGATGCAGTTCTTTCGGCAAAATGGATGAAACACCT
AGGTATCACAAACTTCTCCAGGCCAAGGAAACCTGGTTTTATGCCAGATTATACACTTGTCATATAGGAGGGAAATCAAC
ATGATGTTAAATATAAATCAGAAGACATGCATAAAGACCGAGTGAAATATGAAATCAAAGGCTGAAATCTGTGCGCACAT
ACAAATTCAAGGGATGTTTAAATCTGTGCGCCGACATTGAGGGTCGGGAGGAGGATAGGTGGAGTGGCGGCAGCTGATGG
TTGGTACGGGAGGAGATGGGAGAAGGGTACTAGGGTTAGGCTGGTGTGGAATCGCAGTTAAATGGGCTGGCTCGAAAATT
TCGACTCCCCGGGCTGG
>chr3B_1109
--------------------------------------------------------------------------------
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--------------------------------------------GGCGAGTACATACAGTCAGCCACCTTCGCCATCGGC
GGCTACGACTGGTGCGTTCGCTACTACCCCGACGGAGA---AACCCAGGATTGCAGGGGCTACGTCTCAATCTTCCTTGA
GCTCCTGACCAGGAACGCCAAGGTTAGGGCTGAGTATGAATTCAGGCTCGTCGAC---TCGGGCAGCGCGCTGCCGCCGT
CGCCAGTGACACATCT------GTTTACTAACAACTACAACACAGTCGACCCGGATGAAGATCCTGCTAGGTATGGAGCT
CATAGGTTTATGAAACAGCAGGAGGTAAAA------CCGTACGTGCGGGACGACTGCCTGGAGATTGAGTGTGAAGTCCT
CGTTATCAATCCTATAACAAAACTTGAGGTGCAG---------------------------------GATGTGCCACCCT
CGGACCTGCCGAATCATCTCGGGAAATTGCTGGATGGCAAGAGGGGAGCAGATGTGACTTTTGAGGTTAAAGGGGAGGTT
TTCTCTG-------CTCACAAGATTATGCTCGCGACGCGATCGC--CGGTCTTCGACGCTCAACTCTATGGACCCATGAG
GGATGTCAATGCTACGAG---TAAGAACATAATCATCAAAGACATGGAGGCCCCTGTTTTCAAGGCGTTGCTTCACTTTA
TCTACACGGATTCTCTGCC---TGCTATGGATGACATTGATGATGGTGAGAGTCAAGACATGGTTAAGCATTTGCTCGTG
GCTGCGGATAGATATGCCATGGACAGGATGAAGATGATGTGTGAAGATATTCTATGCAAGAGCTTTGATGTCGAGACTGT
GGCGACCACGTTGGCTCTAGCTGATCAGCATCACTGCAGCAAGCTGAAATATGCTTGTGTTGAATATATCCTCTCTTCAA
ACAGAGTGAATGCTGTGGTGGCAAGCAAAGGGTACGCACACCTCAAAAGATCGTGTCCTGCAGTCATGTTTGATGTCTTT
GAGAGGGCTACCAAGTCTCGCAAAATTTAAGTGCTCTTGGAAGT------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------
>chr2A_1468
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AACTGAGGTCCAGA------------------------------------TGCCACCCT
TAGACTTGGCAGAAAATTTCGGAAAATTGCTAGAGGCGGCTGAGGAAGCAGATGTGACATTCGAGGTTGAAGGTGAGATT
TTTGCTA-------CACATAAGATTGTGCTCGCAACGCGGTCTC--TAGTCTTCAAGGCAGAGTTGTGTGGACCGATGAG
AGGCTAGTGTGGAC---------AGACCATAACAGTCGAAGACATGCAGCCTGCTGTTTTTAAGGCATTACTTCACATTA
TCTACACGAATTTATTGCC---TTCCATGGACAAACTTGATGATGAAGAGAAAAAGGAAATGGTCAGGCACTTACTAGTG
GCTGCAGATCGGTATGCAATGGAAAGGATGAAGATGATGTGTGAAGACATTCTTTGCAAAACTCTTGATATTCAGACTGT
GGCGACCACGTCAGCTCTAGCTGATCAGCATCACTGCAGCAGGCTAAAAGATGCTTGTGCTGAATTTATCATGTCTTCAA
ATAGATTGAATGATGTGTTGGCAAGCCAAGGGTATGCGCACTTGAAGCAATCATGCCCTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
----------------------------------------------------S---------------------------
-------SSSSSSS-------------------S----------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------SS
SSSS---------------S----------------------------------------S------------------S
S------------------------S----S-------------------------------------------------
----------------------------------S-------------------------------------------S-
-------------S------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--S--S-------------------S--------------------------------------------------S---
----------------------------------------------SS------------------------------S-
----S-------S---------------------------S-----------------S---------------------
--S-------S--------------------------S---S---S----SS-------------------S--------
----S--S----------------------------------------------S-----------------S-------
-----------------
>forward_1535
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TGTGAAGTCAA
GGTTATCAATGCTAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_2560
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
TCCCGATGCAGTCACCTTT-------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
