>input_sequence_61422
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ATGCTTCTCCTGAGCCTCGCGCGCGCGGCCCCTCT---CGTCCGCGC
GGCGTCGACG------ACGGCCACCCTGGCGGCGGCGCTGAAGATGGGCGACGCGCTGCGCTCGCACCGGCGGCGGTTCA
CGGAGGAGGACGTGGCGGCGTACGCGGGGGTGAGCGGCGACCGCAACCCGGTCCACCTGGACGAC---------------
-----GCCTTCGCGCGCGGGACG--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTTGCCTCCCTCTTCCCCGCCCTCATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNT--CTGCCATTCCGCCGAACGGGTGGCGGGCATGGCGCATGGTCGACGGGAT
CCCGCCCTGATCTGACGGCTGCT-----TCT-----TCG--------TGTTCGTGCAGCCTGGAGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGCACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGCAAGGCACATGTACTACT-ACC------ACCTAGCGCCATTTTT-TATCTCCTCTTCTTTCTAGCATTGCGCTTGC
TGACAACTAATAGTA-----ATGCTACATCTGCTGTGCAGCGTCAAGTTCGCCACCAAGTGCTTCATGGACGATGAGGAG
ACTCTCGCCATCGATGGCGAGGCCATGGC-TTTTCTGCCGACACTGCAGCTCAGCGCGGAGGCAATCAAGTGA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1B_1_TraesCS1B01G389100
CCCGGGCTTTCTATTTGAACCGCTATGTTATGTTCGTGGTGCTATTGATCTGTTTCTCTGTTTCATCAAATTAATTTTA-
TGCAATCTGATTTAGCAAGTTCGAAGTTCTTAATCCA-TTTACCAGTATCTGAGGTAGTCGCCCTTCGTGCGTGGTATTT
GGCCGTACTACATTGTCTCCATTTGCATGTTTGTCCACTTGTTTAACAATCAGCTGTAGTAATGAGGTATTCTTCTAATA
TAAAGCATTAAAACCTATTTTTCTGGTGTTGCAGAAAATGCTGCTTCCGTGTGGCCTCCCCCCTGAGAGAGACGAAGACT
GAGGGAGTTGGTACTATAGTGCTACCTCCACAGCA------GCTTATGTTCAGAATTCAGATGATGTTTGTTACCAGAAT
CTTTAACTCTAAGGCACCTTATGTGGTTGTGTTTGAACTTCCTGAACATC---------TTTAGCACCGTGTACCCTGTT
TATTGCA--------------CTCCATGGATCTTTATCCCTGTTCA----------------------------------
------------------------------------------------TGATGGTCGTATCTGCCTCCTGCTATCTGTGA
ATGATTGAATCGAATTGCAGCAGCACATGTTGAAGTTGTAATGTTGTTGAGATGCTATGCTCTGGTTTTTCATGTTCCTG
CGAGCTGGCCTCTCTGCCAGGCTTCATTGCTGCCACCAGTGGCGGAGGAGGCGGGGGGAAGCATGAACCACCGTCCGCCG
GCAGCCGCCACATCTCCTTTTACTGGAACTACAGATGCAGTAGCACCTGATATCTCACCTCGATTTCACTTGAGATGTTG
GCAGCAAATTGGATGAATCTGTTGGCTAAACTGTTCGACAG---------------------------------AGTCTG
AATCCAATTTCCTTGTGCATTTTGTATTCTGATCGTACCAAATGGG----------------------------------
----------------------------------------CTGGCGGTTTCGATTTCTTGGGCCGGGTCCAGCACATCGG
CAGATGGCTTGATGGGCCGC------------CACGCCATCGTTCTTCTTTGCCGTGGC-CTCTCTCGCTCCATCCCCAC
ACATCCCGACGCCGGGAGGAAAAGCTACCGGGGATGCTTCTCCTGAGCCTCGCGCGCGCGGCCCCTCT---CGTCCGCGC
GGCGTCGACG------ACGGCCACCCTGGCGGCGGCGCTGAAGATGGGCGACGCGCTGCGCTCGCACCGGCGGCGGTTCA
CGGAGGAGGACGTGGCGGCGTACGCGGGGGTGAGCGGCGACCGCAACCCGGTCCACCTGGACGAC---------------
-----GCCTTCGCGCGCGGGACG--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTTGCCTCCCTCTTCCCCGCCCTCATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNT--CTGCCATTCCGCCGAACGGGTGGCGGGCATGGCGCATGGTCGACGGGAT
CCCGCCCTGATCTGACGGCTGCT-----TCT-----TCG--------TGTTCGTGCAGCCTGGAGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGCACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGCAAGGCACATGTACTACT-ACC------ACCTAGCGCCATTTTT-TATCTCCTCTTCTTTCTAGCATTGCGCTTGC
TGACAACTAATAGTA-----ATGCTACATCTGCTGTGCAGCGTCAAGTTCGCCACCAAGTGCTTCATGGACGATGAGGAG
ACTCTCGCCATCGATGGCGAGGCCATGGC-TTTTCTGCCGACACTGCAGCTCAGCGCGGAGGCAATCAAGTGACAAGTAT
GTT-----CATTAGAA------------CCATTTGGAATAGGACGAATTTTATCTCATGACGAAACATGTCGCCTTCGCA
TAAGCTCCGGGCCTAGGGGACATGAGATTGCAGCTTTGTTGGTAATACTTCGTTGCAGCCTTCCTGTTATGATTAACAGC
ATGAGCAAAGAGTAGTAGATCACTTCAGTTTTCTGAACATTCAATTGGTTGGGTGTTCATGCTGAC--TGTGGTAGGAAC
TGAAGAATTTCAACAGAATAATTTGAACCACTAGGCATATTCAGTG---GATCACTTCAGTCTGCTCCATACTATTTCTC
GCTGCTGCTCCATACTATTTCT---------------------------------------------GCCGCTGCTCTGT
TGTGAAGAGAGGAAGAAAGGAAATAACTC-GGTCTGCTTAGTTCACAAAATAACAAATCTGAATCTTTTACATTTAAACT
TAAATCTTCTAGGAACTGAAGAATTTCAACAGAATAACTTGAACCACTAGCCATGTTCAGTACTTCAGTGAACCTTGTAA
TGTGCTTGTATCATGTTTGTTTGAATTTTCATTGGATTGATTCTTCATTAGAGACCGACTCCAACAATTTCAGCTCTTAG
CCAAACTGAGAACTGGACGTGGTTCTCACTCTCATATTGTGCTCTGAGTAGGTTTCAGGAAAGTGGGAGAAGGAACAATT
GAACGTGAGAAGTAAGGCGGGGGATAATGTGCGGGAGTAGCAAAGACAGTGATCCCATATTGGCTGTAACCTGAGAAGAT
GTGTTCCCTCTTTCCCTCCAAAACTGAGCAGAAGCAAGTTGTA---CTGAGCAAAAGGAGAGCAAACAGTAAGCATCAAC
CCCGCGGTATTCCTTCAAAAATTTAAACTTTAAACAGCACACTTTAGATGTCTAATGGACAATTTTTACATCTGGACTCA
CTTCTGAAAACTCAAAATATTTCAAAATCACATACATACCATTTCAAGGAGGAAAAACAATAGAATTGATGACCGCCTTT
AGGACTGACTGGCAATGAGGCATA
>chr1A_1
CCCAGGTTTTCTATTTGAATCCCTATGCTATGTTTGTTATGCTATTGATCTGTTTCTGTGTTTCATCAAATTCATTTTGT
TGCCATCTGATTTAGCAAGTTTGAAGTTCTTAATGTA-TTTACCAGTATCTGAGGTAGTCGCCCTCCATGTGTTGTATTT
GGCCATACTATATTGTCTCCATTTGCATGTTTGTCCACTTATTTATCAAGCAGCTGTATCGACGAGTA----TTCTAATA
TAGACCATG----------TTTCTGGTCTTGCAGAAAATGCTGCTTCCCTGTGGCCTCCCTCCTGAGAGAGATGAAGACT
GAGG-AGTCAGTACTGTAGTGCTACCTCCACAGCA------GCTTGTGTTCAGA-------TGATGTTTGTTACCAAAGT
CTTAAGCTC--AGGCACTTTGTGTGGTTGTGTT---------TGAACATC---------TTTAGCACTGTGCACCCTGTT
CTTGCTTGTAGTCCTCTCTATCTCTATGGATCCTTACCCGTTCAGATTGGTTTGGTTATCCCGCTACCATCTCGTTTAAA
TTATGGACGCAGGTGGCTATCTTTTCTCATGAATGGGTAAATGTAATGTGAT-GTCGTATCTGCATCTTGCCATCTGTGA
ACGACTGAATCGAATTGCAGCAGAACATGTCGAAACTGCAATATTTTTGAGAGTTCATGTCGGTTTCTGAAGCAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CAGCAAATTCGATGGATCTGTTTGCTGAAGTTTTTGACAGAGTCTGCCATACATATACGTGAACACTGCAACTAGTCTG
AATCCAATTTTCTTCTGCCTTCTGTATCCTGATCATACCAAATGTCACTCCAGCCAGTAACGAAATCACCGTGGCATACG
GTGTAATACGCGTAAGCAGTCCTAGAGAGTAGTATACGCACTGGCGGTTTCGATTTCTTGGGCCGGGTCCAGTACATCGG
CAGATGGCCTGGTGGGCCGCGATGCATACACACAGGCCATCGTTTTCCTTTGCAGCGGCCCTCTCTCGCTTCATCCC--C
ACATCCCGGCGCCGGGAGGAAAAGCTACC-AGGATGCGTCTCGTCAGCCTCACCCGCGCGGCCACTCA---CGTCCGCGC
GGCGTCGACG------ACGGCAACCATAGCGGCGGCGCTGAAGGTGGGCGACGCGCTGCGCCCGCGCCGGCGGCGGTTCA
CGGAGGACGACGTGGCGGCGTACGCGGGGGTGAGCGGCGACCGCAACCCCGTCCACCTTGATGAT---------------
-----GCCTTCGCGCGCGGGACG--------------------GGCGGGTTCCAGCGTGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCCGCCCTCATCGCCTCCCACTTCGTGCGCTCCTTTCCTC----CCCCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--TTGCCATTCCGCCGAACGGCTGGCGGGCT-------------------T
CCCACCCTGATCTGACGGCTGCT-----TCC-----TCG--------TG------CAGCCTGGAGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGCACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGGAAGGCACATGTA-TACT-ACC------ACCTAGCGCCATTTTTGTATC---------TTCTAGCATTGCGCTTCC
TGGCAACTAATAGCA-----AT-----ATCTGTTGGGCAGCGTCAAGTTCGCCACCAAGTGCTTCATGGACGATGAGGAG
ACTCTCGCCATCGACGGCGAGGCCATGGC-TTTTCTGCCCACGCTGCAGCTCAGCGCCGAGGCAATCGAGTGACAAGTAT
GTT-----GATTCGATGCTATGATTGATCAATTTGGAACAGGGCGACTTTTATCTCATGATGAACCATTCCGCCTTCGCA
TAAGCTTCGGGCCTCAGGGACATGAGATTGCAGCTTTGTTGGGAATAGCTCGTTGCAGTCTTCCTGTTATGATTAACAGC
ATGAGCAAAGAGTAGTATATCACTTCAGTTTTCTGAACATTCAATGGGTTGGGTGTTCATGCTGAC--TGTGATAGGAGC
TGAAGAATTTCAACAGATTAATTTGAACCACTAGGCATACTCAGTA---GATTACTTCAGT-TGCTCAGTACTACTTCTT
GCTGCTGCTCCATACTATTTCTGCCGCTGCTCAGTACTACTTCTTGCTGCTGCTCCATACCATTTCTGCCGCTGCTCTGT
TGTGAAGAGTGGAAGATAGGAAATAACGT-GGTCTGCTTAGTTCGCAAAATAACAAATCTGAATCTTGTACATTTAAACT
GAAATCTTCTAGGAACTGAAGAATTTCAACAGAATAACTTGAACCACTA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GGCTGTAACCTGAGAAGAT
GTGTTCCCTCTTTCCCTCCAAAACTGAGCAGAAGCAAGTTGTAGTACTAAGCAAAAGGGAG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1D_9
--------TTCTATTTGAACCCCTATGCTATGTTCTGAATGCTATTGATCTGTTATTGTGTTTCATCAAATTCATTTTAT
TGCCATCTGATTTAGCATGGTTGAGGTTCTAAATGTATTTTACCAGTATCTGAGGTAGTCGCCCTCCATGCGATGTATCT
GGCCATACCACAATGTCTCCATTAGCATGC-TGTCCACTTGTTTAACAAGCAGTTGTATCGACGAGGCATTT---TAATA
TAAATTATTAAAACATGAGCTTCTGGTGTTGCAGAAAATGCTGCTCCCCTGTGGCCTCCCCCCTGAGAGAGACGAAGACT
GAGG-AGTTGGTACTATAGTGCTACCTCCACAGCAACAGCAGCTTGTGTTCAGA-------TGATGGCTGTTACCAAAGT
CTAAAG-TCGAAGGCACTTTGTGTGGTTGTGTT---------TGAACATCCTGAACATCTTTAGCACCTTGTACCCTGTT
TTTACATGTATTGCACTC------CATGGATCTTTATCTCTGTTCA----------------------------------
------------------------------------------------TGAT-GTCGTATCTGCCTCCTACCATCTGTGA
ATGATCGAATCGAATCATAGCAACACATGTTGAAGTTGGTATGTTGTTGAGATGCTATGCTCTGGTTTTTCATGTTCCTG
CGAGGAGGC--------------------------------------------GGGGCCAGCACGGACCAACGTCTGCTG
GCAGCCGCCACATTTCCTTTTACAGGAACTACAGACGGACTAG---CTGATATCTTACCTCGATTTTACTGGAGATGTCG
GTAGCAAATTGGATGAATCTATTCGCTAAACTGTTCGACAGAGTCTGAATCCAATTTCCTTTTTTTTTTGAGACA--CTG
AATCCAATTTCCTTGTGCATTTTGTATTCTGATCGTGCCAAGTGGG----------------------------------
----------------------------------------CTGGCGGTTCCGATTTCTTGGGCCGGGTCCAGTACATCGG
CGGATGGCTTGATGGGCCGC------------CACGCCATAGTTCTTCTTTGCCGTGGC-CTCTCTCGCTCCATCCCCAA
CATCCCCGGCGCCGGGGGGAAAAGCTACCAGGGATGCGTCTCGTCAGCCTCGCGCGCGCGGCCCCTCG---CGTCCGCGC
GGCGTCGACGGCGGCCACCCCCACCCTGGCGGCGGCGCTGAAGGTGGGCGACGCGCTGCGCCCGCGCCGGCGGCGGTTCA
CGGAGGAGGACGTGGCGGCGTACGCGGGGGTGAGCGGCGACCGCAACCCCGTGCACCT--------------------AG
ACGACGCCTTCGCGCGCGGGACG--------------------GGCGGCTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCCGCCCTCATCGCCTCCCACTTCGTACGCTCCTCTCCTC----CCCCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCTTTGCCATTTCGCCGAGCAGCTGGTGGGCATGACG---GGTGA---GGAT
GCCACCCTGATCTGACGGGTGCT-----TCT-----TCG--------TG------CAGCCTGGAGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGCACGTCGGGGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGCAAGGCACATGTACTACT-ACTACTAC---CTAGCGCCATTTTTCTATCTCCTTTTCTTTCTAGCATTGCCCTTGC
TGACAACTAATAGTAATGCTAT-----ATCTGTTGGGCAGCGTCAAGTTCGCCACCAGGTGCTTCATGGACGACGAGGAG
ACTCTCGCCATCGACGGCGAGGCCATGGC-TTTTCTGCCCACACTGCAGCTCAGCACAGAGGCAATCGAGTGACAAGTAT
GTTATGTTGATTAGAA------------CCATTTGGAATAGGACGACTTTTATCTCATGATGAAACATTTTGCCTCCGCA
TAAGC-----------GGGACATAAGATTGCAGCTTTGTTGGTAATAGTTCGTTGCAGTCTCCCTGTTATGATTAACAGC
ATGGGCAAAGAGTAGTAGATCACTTCAGTTTTCTGAACATTCAATGGGCTGGGTGTTCATGCTGAC--TGTGATAGGAGC
TGAAGAATTTCAACAGATTAACTTGAACCACTAGGCATATTCAGTATG-GATCACTTCAGTCTGCTCAGTATTACTTCTT
GCTGCTGCTCCATATTACTTCT---------------------------------------------GCCGCTGCTCTGT
TGTGAAGAGAGGAAGAAAGGAAATAACCC-GGTCTGCTTAGTTCACAAAATAACAAATCTGAATCTTTTACATTTAAACT
GAAATCTTCTAGGAACTGAAGAAGTTTAACAGAATAACTTGAACCACTAGGCATGTTCAGTACTTCAGTGAACCTTGTAA
TGTGCTTGTATCATGTTTGTTTGAATTTGCACCGGATTGGTTCTTCATTAGAGATCGACTCCAACAATTTGAACTCTTAG
CCAATCTGAGAACTGGACGTGGTTCTCACGCTCATATTGTGCTCTGGGTAGGTTTCAGGAAAGTGGGAGAAGGAACAATG
GAGCGTGAGAAGTAAGGCGGGGGATAATATGCGGGAGTAGCAAAGACAGTGATCCCATATTGGCTGTAACCTGAGAAGAT
GTGTTCCCTCTTTCCCTCCAAAACTGAGCAGAAGCAAGTTGTA---CTGAGCAAAAGGAGAGCAAACAGTAAGCATCAAC
CCCGTGGTATTCCTTCAAAAATTTAAACTTTAAACAGCACACTTCAGATGTCTAATGGACAATTTTTACATCTGGACTCA
CTTCTGAAAACTCAAAATATTTCAAAATCACATACATACCACTTCAAGGAGAAAAAACAATAGAATTGATGACCGCCTGT
AGGACTGACTGGAAATGAGACATA
>chr1B_989
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------AAGCTGCC-GGGATGCGTCTGGCGCGCCTCGCCCGCGCGGCCCCTCTTCTCGTCCGCAC
GGCGGCGACGGCGGCCACCGCCGACCCAGCGGCGGCGCTGAAGGCGGGCGACGCGCTGCGCTCGCGCCGGCGGCGGTTCA
CGGAGGACGACGTGGCGGCGTACGCGGGGGTGAGCGGCGACCGCAACCCCGTCCACCT--------------------GG
ACGACGCCTTCGCGCGCGGGGCG--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCAGCCCTCATCGCCTCCCACTTCGTACGCTCCCTCCCTCTCCCCCTCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--TTGGCATTCCGCCGAACAGGTGGTCGGCGTGGCG---GGTCGATGGGAT
CCAG-CCTGATCTGACGGGTGCTTCTTCGCG----TT--------GATG------CAGCCTGGGGCCGTGTACGCGAGCC
AGTCGCTCAAGTTCGCGGCGCCGGTGTACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCAAATCAAGGCGGCC
AGCGGAAGGCACATGTACTACCTAGCACCA-----------------------TCCTCTTGTTTCCGACCTTGTGCTTGC
TGACAACTAACAGTAAC---AT-----ATCTGTCGGGCAGTGTCAAGTTCGCCACCAAGTGCTTCACGGATGACGATCAG
ACTCTCGCCATTGACGGCGAGGCCATGGC-TTTTCTGCCCACACTGCAGCTCAGCACAGAGGCGATGGAGTGACATGTTT
GTT-----CATTAGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1D_1014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCCTCGCCCGCGCGGCCCCTCTGCTCGTCCGCAC
GGCGGCGACGGCGGCCACCGCCGACCCAGCAGCGGCGCTGAAGGCGGGCGACGCGCTGCGCTCGCGTCCGCGGCGGTTCA
CGGAGGACGACGTGGCGGCCTACGCGGGGGTGAGCGGCGACCGCAACCCCGTCCACCT--------------------GG
AC--------------------GACGCCTTCGCCCGCGGGGCGGGCGGGTTCCAGAGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCAGCCCTCATCGCCTCCCACTTCGTGCGCTCCCTCCCTCCT----CCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--TTGCCATTTCGTCGAACAGCAGGTGGGCATGGCG---GGTCAACGGGAT
CCCG-CCTGATCTGACCGGTGCTTCTTCGCG----TTTG--------TG------CAGCCTGGGGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCTCGGCGCCGGTGTACGTCGGCGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCAAATCAAGGCCGCC
GGCGCAAGGCACATGTACT-----------CTACCTAGCACCCCTTAGACTGTA--TCTTCTGTCTAGCCTTGTGCTTGC
TGAAAACTAATAGTA-----AT-----ATCTGTTTGGCAGCGTCAAGTTCGCCACCAAGTGCTTCACGGACGATGAAGAG
ACACTCGCCATTGACGGCGAGGCCATAGC-TTTTCTGCCCACACTGAAGCTCTGCACAGAGGCAATCGAGTGACAAGTAT
GTT-----GATTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr1A_1014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCCTCGCCCGCGCGGCCCCTCTGCTCGTCCGCAC
GGCGGCGACGGCGGCCACCGCCGACCCAGCGGCGGCGCTGAAGGCTGGCGACGCGCTGCGCGCGCGTCCGCGGCGGTTCA
CGGAGGACGACGTGGCGGCGTACGCGGCGGTGAGCGGCGACCGCAACCCCGTCCACCT--------------------GG
ACGACGCCTTCGCCCGCGGGACG--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCCGCCCTCATCGCATCCCACTTCGTATGCTTCCTCCCTCCCTCCCTCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--TTGGCATTCCGCCGAACAGGTGGTGGGCATGGCGCCTGGTCGACGGGAT
CCCACCCTGCTCTGACGGGTGCT-----TCT-----TCGCGTTGCGATG------CAGCCTGGGGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGTACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCATATCAAGGCCGCC
GGCGCAAGGCACATGTACTACTTACTACTAC---CTGGCACCATTTTGC----A--TCTTCTTTCTAGCCTTGTGTTTGC
TGGAAACTGATAGTAA---TAT-----ATCTATTGGGCAGCGTCAAGTTCGCCACCAAGTGCTTCATGGCCGATGAAGAG
ACTCTCGCCATTGACGGCCAGGCCATGGC-TTTTCTGCCCACACTGCAGCTCAGCACAGAGGCGATGGAGTGACATGTTT
GTT-----CATTAGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr7A_1045
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGCATCGACG------ACGGCCGTCCCAGCGGCGCTGCTGAAGGTGGGCGATGCGCTGCGCGCGCCCCGGCGGCTGTTCA
CGGAGGACGACGTGGCGGCGTACGCCGGGGTGAGCGGCGACCGCAACCCCGTCCACCT--------------------GG
AC--------------------G--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCTTCGCCTCCCTCTTCCCCACCCTCATCGCCTCCCGCGTCGTACGCTCCTTTCCTCCCCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--CTGCCATTCTGCCGAATGGCTGGCGGGCATGGCGCCCGGTCGACGGGAC
CCCG-CCTGATCTGACGGCTGCTTCTTGTCT-----TCG--------TG------CAGCCTGGAGCCGTGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCGGTGCACGTC--------GGTGGTTGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGCAAGGCACGTGTACTACT-ACCACTACTACCTAGCGCCATTTTTGTATCTCCTCTTCTTTCTAGCATTGCGCCTGC
TGAGAACTAATAGTAATGCTAT-----ATCTGTTGGGCAGCGTCAAGTTCGCCACCAAGTGCTTCACGGACGATGAGGAG
AGTCATGCCATTGACGGCGAGGCCATGGC-TTTTCTGCCCACGCTGCAGCTCAGTGCAGAGGCAATCGAGTGACAAGTAT
GTT-----GATTAGAA------------CCATTTCGAATGGGATGACTTTTATCCCATGATGAACCATTTCGCCTTCGCA
TAAACTTCGGGGCCGGGGGACATGAGATTGCAGCTTTGTCGGTAATAGTTCGTTGCAGTCTTCCTGTTATGATTGATAGC
ATGAGCAAAGAGTAGTAGATCACTTCAGTTTTCTAAACATTCAATGGGCTGGGTGTACATGCTGAC--TG--ATAGGAAC
TGAAGAATTTCAACAGGTTAACTTGAATCACTAGGCATATTCAGTACTAGATCACTTCAGTCTGCTCAGTGCTACTTCTT
GCTGCTGCTCCATACTATTTCT---------------------------------------------GCCGTTGCTCTGT
TGTGGAGAGAGGAAGAAAGGAAATAAC-T-GGTCTGCTTAGTTCACAAAATAACAAATCTGAATCTTTTACATTTAAACT
GAAATCTTCTAGGAACTGAAGAATTTCAACAGAATAACTTGAACCACTAGGC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2D_1051
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GACG------ACGGCCGTCCCAGTGGCGCTGCTGAAGGTGGGCGAGGCGCTGCGCGCGCCCCGGCGGCTGTTCA
CGGAGGATG-CGTGGCGGCGTACGCCGGGGTGAGCGGCGACCGCACCCCCGTCCACCTGGACAACGCCTTCGCGCGCGGG
AC--------------------G--------------------GGCGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCTTCTTCCCCGCCCTCATCGCCTCCCACGTCGTACGCTCCTTTCCTT----CCCCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--CTGCCATTCCGCCGAACGGCTGGCGGGCATGGCGCCCGGTCGATGGGAT
CCCGCCCTGATCTGACGGCTGCT-----TCTCGTCTT--------CATG------CAGCCTGGAGCCGTGTACGTGAGCC
AGTCTCTCAAGTTCACGGCGCCGGTGCACGTCGGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTCCACATCAAGGCCACC
GGCGCAAGGCACGTGTACTACT-ACCACTACAACGTAGCGCCATTTTTGTATCTCCTCTTCTTTCTAGCATTGCGCCTGC
TGAGAACTAATAGTAATGCTAT-----ATCTGTTGGGCAGCGTCAAGTTCGCCACCAAGTGCTTCACGGACGATGAGGAG
ACTCTCGCCATTGACGGCGAGGCCATGAC-TTTTCTGCCCACGCTGCAGCTCAGCGCAGAGGCAATCGAGTGACAAGTAT
GTT-----GATTAGAA------------CCATTTCGAATGGGACGACTTTTATCTCATGATGAACCATTTCACCTTCGCA
TAAACTTCGGGGCCGGGGAACATGAGATTGCAGCTTTGTCGGTAATATTTCGTTGCAGTCTTCCTGTTATGATTGATAGC
ATGAGCAAAGAGTAGTAGATCACTTCAGTTTTCTGAACATTCAATGGGCTGGGTGTACATGCCGACTGTG--ATAGGAAC
TGAAGAATTTCAACAGGTTAACTTGAATCACTAGGCATATTCAGTACTAGATCACTTCAGTCTGCTCAGTACTACTTCTT
GCTGCTGCTCCATACTATTTCT---------------------------------------------GCCGTTGCTCTAT
TGTGGAGAGAGGAAGAAAGGAAATAAC-TCGGTCTGCTTAGTTCACAAAATAACAAATCTGAATCTTTTACATTTAAACT
GAAATCCTTTAGGAACTCAAGAATTTCAACAGAATAACTTGAACCAC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr6A_1179
ACG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ACGCCTTCGCGCGCGGG
AC--------------------G--------------------GGTGGGTTCCAGCGCGGCCGCGTGGTGCACGGCATGC
TCGTCGCCTCCCTCTTCCCCGCCCTCATCACCTCCCACGCCGTACGCTCCTTTCCTC----CTCCTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------T--CTGCCATTCCGCCGAACGGCTGGCAGGCATGGCGCCCGATCGATGGGAT
CCCACCATGATCTGACGGCTGCT-----TCTCGTCTTCG--------TG------CAGCCTGGTGCCATGTACGCGAGCC
AGTCCCTCAAGTTCGCGGCGCCCGTGCACGTCAGAGACGAGGTGGTCGCGCAGGTGCAGGCGCTGCACATCAAGGCAACC
GGCGCAAGGCACATGTACTACT-ACCACTACTACATAGCGCCATTTTT-TATCTCCTCTTCTTTCTAGCATTGTGCCTGC
TGAGAACTAATAGTGATGCTAC-----ATCTGTTGGGCAACGTCAAGTTCGCCACCAAGTGCTTGACGGACGATGAGGAG
ACTCTCGCCATTGATGGCGAGGCCATGGCTTTTTCTGCCCACGCTGCAGCTCAGCGCAGAGGCAATCGAGTGACAAGTAT
GTT-----GATTAGAA------------CCATTTTGAATGGGACGGCTTTTATCTTATGATGAAACATTTCGCCTTCGCA
TAAACTTTAGGGCCGGGGGGCATGAGATTGCAGCTTTGTCAGTAATAGTTCGGTGCAGTCTTCCTGTTATGATTGATAGC
ATGAGCAAAGAGTAGTAGATCACTTCAGTTTTCTGAACATTCAATGGGCTGGGTGTACATGCCGATTTTG--ATAGGAAC
TGAAGAATTTCAACAGGTTAACTTGAATCACTAGGCATATTCAGTACTAGATCACTTCAGTC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
---S--S--------------S-----S---------SS------------------S--------------S-------
---S-----------------S------------SS-----------------------------S-S-----S------
----S--------------------------------------------S--------SSS-S----S---S--------
----S---------S-SSS-----------------------------S-------------------------------
----S----------------------------------------S--------SSSSSSS---------------S-S-
---S-S---S-------S--S------------SSSSSSSSS--------------------------------------
-S-SSSS-------------------------------------------------------------------------
----------------------------------------------------S------------------S--------
--------------------------------------S-----------------------------------------
----SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS----S-S----S----S--S-
-------------S---------S-----------S-S-S---SSS---------S----------S---S-------S-
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------S--------------------S-------S----S-------------------------------------
-------------------------------------------S---------------------S--------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
----S-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------S-------------
-------------------------------------------------SSSSSS-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSSSS-----S--S--------------------------------------------
---------------------------------------S-----------------S---------S------------
----------------------------------------------S-------------S-------S-----------
------S-------S--------------------------------S----------S---------------------
---------------------------------------------S--------------------------S-------
-----------------S---------------------------S---------------------SS-----S----S
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
S-------------------------------------------------S-----------------------------
----------------------------S--SS------S--------------S---------------S-S-------
----S------------------------S----------------S--------------------------------S
--S-------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------S-----------------------------------
-----------------------------------------S---------S--------------------------S-
------------S------S----
>forward_761
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CTTCATTGCTGCCACCAGTG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_2495
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------AGGGGACATGAGATTGCAGC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
