>input_sequence_61343
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-------------------------------------------------------------ATGTCTCAAACCTGCCTGC
CGCCTGGCTTTCGTTTCCATCCAACTGATGTTGAGTTTGTTTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTT
TTTGTCGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTGCTCCTTGGGACCTCCTGGT--AATTTCATCTATTGTTTTA
TTTTTTTT--ATTTAATGATTGCACCCAAATGAGTTGCAAATTAATCTAGAATTCTTGTAATGCTCTCTCTTTGGTTGAA
TTTGGTTCCTGCCTTTGTCGCGACCTTCTATGTTTCTGTGCAGATAAATCATAAATCATGTCTCCAGAGCAAAGATCTTG
AGTGGTTCTTCTTTTGCCCCCATGACAAAAAAAATCCTAAAGGGTCTTGGACGAACCGTACCACACCGAATGGTTATTGG
AAAACAAGTGGAAAAGACGGAACTATTGACCTGAACTCTCGCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGG
CAAGGCACCCAAAGGCAATAGGACTGATTGGGTAATGTATGAATACAAAATGGAAGATGAAACCTTGGTGTCTACTGGTT
TCTCAAAGGTACTGCTAACTCTTATCTGATGTTTTTGTTTGCTTCACTTTTTTGAAGTT-TGTTCACTACAGTATATGAA
AGATTCTACCATACTGGAATCTGTTTTGAGGCATGCTCTTTTGCTTGTGGCTGAAATTGTATGTGATAAGTT-GCCTTTA
TATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTCTCTGCCAGTTTATTCAAATATATTTGTCGTTTGTTTG
TTTCAGGATGCTTATGTACTC------------------AGTGGGCTTGGCCCAAGGATTGGTGAGCAATATAGGGCTCC
TTTTGATGGAAATGAATGGGAGAATTTAGATGTTGGAACTTATATCTTGTCTTTTGCACCATCGTCAGGTGTAGAGGATT
CACAGGTCGAAAGTTCTGCCTGGGTTACTGCCATAGTTATTCGGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCT
GAACATGTTAATATCTGTTCTGATGAGGTTGCTGGCTTAACTTGA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr5A_1_TraesCS5A01G220900
CACTACACATGGTTGGGATCTTATCTACCTTGTTAAGAAAAGCCACCGACCACCCTTGCC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTTTCTTCTAGGAAACTTACCGTGGTTTTTTCGTTTGTGGGAAAGATTACTTTTGTTTTGTTACTAATATCATCTGT
GCCTATGAAGTATCATAAATTCAAGTGATT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTATT-CCTCCTCAAAGCCATGGTGTAGGTTAGATA----CACCTTGTTAATGTGCTAGTATTTCAT
TGCGAGTTGTGTACACTGTAAAATCCACTT--TCTTTATAGG-CAATCTTTTCTTTGCTTCCTGG-ACTTTAGTTAGTTG
GATGGGAAGAT--ACCTCATTGATCTGGATAAAACATGGAACA-TATGTATTCTG--TATTTTCATTTCTTGCATATGTT
TTTCCTTTCTGTC-ATGATTTCTAATCTCATGCAGGTTTTTGATCTGAATAACTCATGTCTTTTGAAGTCAGCGAGGCAT
CATCCCCTTATTTCCTCTCATGCTACTTCTGGTTCATATATTGCATAAAATTCCGAG-----------------------
--------TTTTGTGTGAATACTTCCTATCATGTGGATCAGTGGTAGTTGGTTTAATTGGCAAGACTC-------TCTCA
TTTGAGTTCAGAAATATTTGTCGCTCGAGTCCTTGGTGTACTGCTTTCCTTGAGTCTTGCCAAGCTTGGTTTCCCATCAG
TTGTGTCTCCTCCAGCTTTCGGTTGG--------------------------ATCAATTTTTCGATCCTCCCTTCAGAAC
AGTTGTTATAACATGAGC-TGTCCTACTCTGCTCACACTGCAATCTTCTGATGCTCTCTTCTCTGGTTCTTGCTTGTTCT
C-------TTTTGAGCTCCTCTCTCCTTAAGTTTGGTTGATCTGTAGCCTTGA-TTCTGTCTTTTGAGGACAGAAG----
---CATTCAACTTTCTGGCAAACTTAATATTTCCCTGATTTACTGGTATTGTTAGTTGCATTATCTGGTGAAGCAATTCT
GGTTGTGTTTCACCTCTTGTGTTCTTCTGTTGATACTGAGCAAAAGAAACCCACTCCGGTGATGTCTCAAACCTGCCTGC
CGCCTGGCTTTCGTTTCCATCCAACTGATGTTGAGTTTGTTTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTT
TTTGTCGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTGCTCCTTGGGACCTCCTGGT--AATTTCATCTATTGTTTTA
TTTTTTTT--ATTTAATGATTGCACCCAAATGAGTTGCAAATTAATCTAGAATTCTTGTAATGCTCTCTCTTTGGTTGAA
TTTGGTTCCTGCCTTTGTCGCGACCTTCTATGTTTCTGTGCAGATAAATCATAAATCATGTCTCCAGAGCAAAGATCTTG
AGTGGTTCTTCTTTTGCCCCCATGACAAAAAAAATCCTAAAGGGTCTTGGACGAACCGTACCACACCGAATGGTTATTGG
AAAACAAGTGGAAAAGACGGAACTATTGACCTGAACTCTCGCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGG
CAAGGCACCCAAAGGCAATAGGACTGATTGGGTAATGTATGAATACAAAATGGAAGATGAAACCTTGGTGTCTACTGGTT
TCTCAAAGGTACTGCTAACTCTTATCTGATGTTTTTGTTTGCTTCACTTTTTTGAAGTT-TGTTCACTACAGTATATGAA
AGATTCTACCATACTGGAATCTGTTTTGAGGCATGCTCTTTTGCTTGTGGCTGAAATTGTATGTGATAAGTT-GCCTTTA
TATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTCTCTGCCAGTTTATTCAAATATATTTGTCGTTTGTTTG
TTTCAGGATGCTTATGTACTC------------------AGTGGGCTTGGCCCAAGGATTGGTGAGCAATATAGGGCTCC
TTTTGATGGAAATGAATGGGAGAATTTAGATGTTGGAACTTATATCTTGTCTTTTGCACCATCGTCAGGTGTAGAGGATT
CACAGGTCGAAAGTTCTGCCTGGGTTACTGCCATAGTTATTCGGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCT
GAACATGTTAATATCTGTTCTGATGAGGTTGCTGGCTTAACTTGATTACTCTCTTGGCTAATTGTGCTGACGGGAAGTTG
TGTTTTTGCTCCAGTGGACATAACGAATCCCGGGCAACCGTGGAAGCGAGGATTGACATGCACAAGGGGGTCGATGCGAT
GCTGCAAGACTTGGTTTCTGTGACGGTTGCGCAAAACATGTTCTTGTTCTCATAGCCTCCTGTTAGTAGCAGCCAACACT
CAGGGCAATCATCTCCGTTAAATTGGTTGCTGAAGATAAGGACGTCGTCGGCGAGTACAAGCATGGATGGATGAATTCAT
CGGCATAGTTAATTAGGTTCCTTATTTCTTTTCCAGCAGAGAAGATATATAGATTGAGCTATGTTGTGGAACCATCCATT
TTCTTTTGTTTCATGTCGTGGAAGGAACAAACATATGGTATAAAATATATGAATTCCCAAGAGCTTGATTCTATGTTGAT
TTGGAAATGCATGGATGAATAAACCAGGACATGTTATTCTTGTGAACAAATTTGACACCGGAATGATGAAATAAGAGAAA
AGAGGACGCCCTTGTCATGAACCATCATCAGAGAAGATATTAGTACTCCCTCCGTTTGAAAAGGCTTGTCCATCAAATGA
CAAGCTAGTGCTAGATAGTTTTTTCGGACGGAGGGAGTAGTGACTACATCAATGAATTGCAAAGAAACAAATTGACACCG
GAATGACAAGTCAAGAAAAATCCATTTTGAGTGAGTGGATGTGGATCCACTAGAAGCTGAGAATGCCATCAAAGAAACAC
TAAAAGCTGAGAATCAAAGAAAAGAAAAGTTAAAAGGTTCGTAAGGGTTGCTCCCTCCGTTTCTAAGAGTAATTCTAGAT
GGAGGGAGTATTGGTTTGCCATACATATTCCTATAAAGAAGAGTATACCTTAAAATAAGGCAGCATTAATTACAAGCAGT
TATAATAGCTTGAATCGATTGGAAGCCCTTTTCCCTCGCGTCCTGCAAGTAGTAGCCCTTTTTCGCGTGCTAATCCTTCT
TTCCA
>chr3D_1
CACTATACATGGTTGGGATCTTATCTACCTTGTTAAGAAAAGCCACCGACCACCCTTGCGGGATACAGGGCCTCCAATCT
AGAAATGATGTGATCATGGTTTGGCTTTTAGGATTTGCCTCGACACCTCCTTCTGATCATAGGTGTTGTTTTTTTCAGCA
TTCATAGCTTACCTGTAACTAGGCCAGTTTCCGGTGACCTACCTGCCGGTTTCCAACAAATTTTCTGTTTTTTCCTTGAA
ATCTTTTTTCTAAAAGATTGTATGTCCTCTGACCCGAAGTTGTTTCAGAGTACTTTGATACTGGTTTTAGTTAGAACATC
CTGGAACTCTACTGGTTTAGTAGTGAATAAACATTCACGAATGCTTATTCGTGTTACATTTGCGTTCTGCTTCAATGTGC
TTGGGTGCTGCTAACCCTCTTATAAGAAGCAAAGTTTCTCCCTTGAGTTTGAGTGAAAAAATGAAAATGCAAGAAAAACC
TGTTGTTCCATCGTAGTTTTGTTTATATTGGTTTTCATCATATCAGAAGTTACGCTAGTTCGGGCAGATGTACAGTAGCA
TTTAAGCAAACGCAAAGTAGTAGTTCGTCCATTAGTTTGGTGGTATAATGGTGGTCTGTCACCTATCGAATGTTCTTAAG
TTGAAATCATGATCCTCTGATGCATATATGTTTCGGTCCAGACATCTTGCCTATGTTCCCTCGATCTACGCATTGATTTG
GGGTTATGCGATTGGATATTGTAGGAGCTTCATGAAAGTTTGAGATTTGGTCGGCCATTAGATTGTTCAACGCTTATTGA
GGTTTGATTCCTTTTAGTGTCTTGTGATGTACTGTGTATTCTCTTAGATCGTTGAACTAATGGTCTGGAACTGATCCAAA
GCAGTTTCTTCAAGGAAACTTACCGTAGTTCTTTCGTTTGTGGGAAAGATTACTTTTGTTTTGTTACTAGTATCATCTGT
GCCTATGAAGTATCATAAATTCCAGTTATT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTATTTCCTCCCCAAAGCCATGGTGTAGGTTAGATA----CACCTTGTTAATGTGC---TATTTCAC
TATGAGTTGTGTACATTGTAAAATTCGCTT--CC--TATATATCAATCTTTTCTTTGCTTCCTGTTA-TTTAGTTATTTG
GATGGGAAGAT--ACCTCGTTGATCTGGATAAGACATGGAACA-TATGTATTCTG--CATTTTGCTTGCTGTT-TATGTT
TTTCCGTTCTGAC-ATGATTTCTAATCTCATGTAGGTTTTTGATCTGAATCACTCGTGTCTTTTGAAGTCAGTGAGG---
CATCCCCTTATTTCCTCTCATGCCACTTCTGGTTCATATATTGCATAAAATTCCGAGATTTCAGTTGATACAAATGGATC
ATCTGGAGTTTTGTGTGAATACTTCCTATCATGTGAATCAGTGGTAGTTCGTTTAATTGGCAAGACTCAAACTTCTCTCA
TATGAGTTCAGAAACATTTGTTGCTTGAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr1D_61
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GTTTGTTCTAGGAAACTTCCCGTAGTTTTTTCGTTTATGGGAAAGATTACTTCTGTTTTCGTACTAATATGATCTGT
GCCTATGAAGTATCATAAATTCAAGTGATTTGCTCCACAAAGCCTGTAAGTTCTGATTAGATGGTAGGTTAGATGCATCG
ACCTGCTAATGTGCTTATTATATATTTTTATTTCTGTTGCACTAATGTGGTTTTGG-TTAAGGTCGATATTTTCGGTTAT
GTTATCTTGGTGAAAATATATTAGGTGCTCATAGTAGTTTGATATTTGGTTATGTAAGTCAGCAATGTATCAAGTCCTGT
ATGATCCTTTTTGCAGTTTTCTTTTTGTTGAAAGATCCTGTAGTTTTTTC-----TTACATCAGAGCCTATGAAATATAT
ACTAAAATTCTCTCTGTTTCCAACCCAAAGCCACGTTGTAGGTTAGATT----CACCTTGTTAATGTGC---TATTTCAC
TGTGAGATGTGTACAATGTAAAATTCACTT--TA--TATATG-CAATCTTTTCTTTGCTTCCTAGTACTTCTGTTATTTG
GATGGGAAGATTCACCTTGTTGATCTGGATAAAACATAGAACAATATGTATTCTGTATATTCTTC-TACTGTT-TATGTT
TTTCCCTGCTGATGATGATTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGCGAGG---
GATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAAGTGGATC
ATCTGGAGTTTTGTGCGAATACTTCCTATCATGTGAATCAGTGGTAGTTGGTTTAATTGGCAAGACTCAAACTTCTCTCA
TCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGTACTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAG
TTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTCTGGTCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAAT
AGTTGTT-TAACGTGAGC-TGTCCTACTCTGCTCACACTGCAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCT
CCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGATCTGTGGCCCTGAATTCTGTCCTTTCAGGGCTAAAGCATA
TCCCTTTCT------GGCCAGACTTGATATTTCCCTGATT-ACTGGTATTGTTAATTGCCTAATCTGGTGAACCATTTCT
GGTTGTGTTTCACCTCTTGTGTTCTTCTCTTGATACTGAGCACAAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGC
CACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTT
TTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTGCTCCTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTG
ATTTTTCTTGATGTAAGAATTGCACGCAAACGAGTTGGAAACTAATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAG
TTTAGCTCTTACTTTTGTTGCAACCTTGTATATTTCCGTGCAGATAAATCC-------TGTCTCCAGAGCAAAGATCTTG
AGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAAAGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGG
AAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGG
CAAGGCACCCAAAGGCAATAGGACTGACTGGGTGATGTATGAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTT
TCTCTAAGGTACCAATAACTCTTATCTAATGTTTTTGTTTGTTTCACTTTATGTTAAATATGTTCAGTACAGTATATGAA
AGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTTTTGCTTGTGCCTGAAATTGTGCGTGGTAAGTTAGCCTTTA
TATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTTAAATTCTCTGCAAGTTTATTTAAATGTATTTGTTGTTTGTTTG
TTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTGGGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCC
TTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCTTCTATCTTCTCTTTTGCACCGTCGTCAGGTGTAGAGGATC
CACAGGTTGAAAGTTCTGCCTTGGCTACTGCCATAGTTATGCAGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCT
GAACATGTTAATATCTGTTCTGATGAGGT---------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr1A_86
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------TTTTTCCGTTTGTGGGAAAAATTACTTTTGTTTTGTTAATAATATCATCTGT
GCCTATGAAGTATCATA------------------------GCGTGTAAGTTTTGGTTAGATCGTAGGTTGGA-------
---TGCTAATGTGCTTATTATATATTTTTATTTCTGCTGCACTGATGTGGTTTGTGATTAAGCTCAATATTTTGGGGTAC
CTGAACTTGGTGAAAATATATTAGGTGCTCACAATGGTTTGATCTTTGGTTATCTAAGTGCAGCGCTGA--AAGTCCTGT
ATGATCCTTTTCACAGTTTTCTTTTTGTCAAC--------TAGTTTTTTCATGAGTTACATCCGAGCCAATATGAAATAT
ACTAGTAAAATCTGGTG----------AAGCGATGGTGTAGGTTAGATT----CATGTTGTTAATGCGC---TATTTCAC
TTTGAATTGCGTACAATGTAAAATTCACTT--GC--TATATG-CAGTCTTTTCTTTGCTTCCTGGGACTTTAGTTATTTG
GATCGAA-------------------GGATAAAACATAGAACA-CATGTATTCTG--TATTTTTC-TGCTGTT-TATGTT
TTTCCTTTCTGACGATGTTTTCTAATCTCATGCAGGTTTTTGATCTCAGTCACTCATGTCTTTTGAAGTCAGCGAGG---
GATCCCCTTATTTCCACTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGAGAATTCACTTGATACAAGTGGATC
ATCTGGAGTTTTGTGCGAGTACTTCCTATCATGTGAATCAGTGGTAGTTGGTTTAATTGGCAAGACTCAAACTTCTCTCA
TCTGAGTTCAGAAACATTTGTCGCTTGAGTCCTTGGTGTACTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTTCCATAAG
TTGTTTCTCCTCCAGCTTTTGGTTGGACCATTCTCTCCTCTGGTCTAATCTCATCCATCCTTTGATCCTCCCTTCAGAAT
AGTTGTCATAACGTGAGC-TGTC---CTCTGCTCACACGGCAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTTTGTTCT
C-------TTGAGAGCTC--CTCTCCTTAAGTTTGGTTGATCTGCGGCCTTGAATTCTGTCTTTCGAGGACTGAAG----
---CTTTCT------TGCCAAACTTGATATTTCCCTGATTTACTGGTATTGTTAATTGCATAATCTGGTGAAGCAATTCT
GGTTGTGTTTCACCTCTTGTGTTCTTCTGCTGATACTGAGCGCAAGACACCCACTGCAGTGATGGCTCAAACTTGCCTGC
CACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTT
TTTGTTGAAGCTATCTCAGAGGTTGAGCTGTACAAATTTGCTCCTTGGGACCTTCCTGGTAATTTTCATCTATTGTTTTA
TTTTTTAT--ATGTAATAATTTCACCCAAATTGGTTGGAAATTAATCTATATTTCTCATAATGCTCTCACTTTGGTTGAA
TTTAGTTCTCAACTTTGTTGTGACCTTCTGTTTTTCTGTGCAGATAAATCA-------TGTCTTCAGAGCAAAGATCTTG
AGTGGTTCTTCTTTTGCCCCCGTGACAAGAAGTATCCTAAAGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGG
AAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGG
CAAGGCACCGAAAGGCAACAGGACTGATTGGGTGATGTATGAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTT
TCTCGAAGGTACTTTAAACTCTTATCTAATGTTTTTGTTTGTTTCACTTTTTTGAAGTA-TGTTCACT---GTATATGAA
AGATTCTACCATGCTGGAATATGTTTTGAGGCATGCTCTTTTGCTTATGGCTGAAACTGAGCGTGATTAGTT-GCCTTTA
TATTTAGTTAGAAAGCTGTGATCCTAGTATTTCTTTCAAATTCTCTGCAAGCTTAATTAAATATATTTGCTGTCTGTTTG
TTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTGGGCTTGGCCCAAGGATTGGTGAGCAATATGGGGCTCC
TTTTGATGAAAACGAATGGGAGAATTTAGATGTTGGATCTTCTATCTTCTCTTTTGCACCGTCCTCAGGTGTAGAGGATC
CACAGGTCGAAAGTTCTGCCTTGGCTACTGCAATAGTTATTCACGAACCATCCGCTCCTCAGCAATCTGTTCAATTTTCC
GAACATGTTAATATCTGTTCTGATCAGGT---------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr1B_167
--------------------------------------------------------------------------------
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-----------------------------T--------------------------------------------------
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--------------------------------------------------------------------------------
-------------CTATTTCCTCCTCAAAGCCACGTTGTAGGTTAGATTCATTCACCTTGTTAATGTGG---TATTTCAC
TGTGAGCTGTGAACAACGTAAAATTCACTTCCTA--TATATG-CAATCTTTTCTTTGCTTCCTAGGACTTTAGTTATTTG
GATGGGAAGATTCACCTTGTTTATCTGGATAAAACATAGAACAATACGTATTCTGTATATTCTTC-TGCTGTT-TAAGTT
TTTCCCTTCTGATGATGATTACTAATGTCTTGCAGGTTTTTGATCTTAGTCACTCATGTCTTTTGAAGTCAGCGAGG---
GATCCCCTTATTTCCTCTCGTGCTACTTCTGGTTCATATATTGCATAAAATTCCGGGACTTCACTTGATACAAGTGGATC
ATCTGGAGTTTTGTGTGAATACTTCCTATCATGTGAATCAGTGGTAGTTGGTTTAATTGGCAAGACTCAAACTTCTC--A
TCTGAGTTCAGAAACATTTGTTGCTTGAGTCTTTGGTGGACTGCTTTCCTTGAGTCTTGCCAAGCCTGGTTTCCCATCAG
TTGTTTCTCCTCCAGCTTTCGGTTGGACCATTCTCTCTTCTGGTCTAATCTCATCAATCTTTTGATCCTCCCTTCAGAAT
AGTTGTT-TAACGTGAGCTTGTCCTACTCTGCTCACACTGCAATCTTCTGAAGCTCTCTTCTCTGGTTCTTGTCTGTTCT
CCAAGCATTTGAGAGCTCCTCTCTCCTTAAGTTTGGTTGATCTGTGGCCCTGAATTCTGTCCTTTGAGGGCTAAAGCATA
TCCCTTTCT------GGCCAAACTTGATATTTCCCTGATT-ACTGGTATTGTTAGTTGCATAATCTGCTGAAGCATTTCT
TGTTGTGT-----CTCTTGTGTTCTTCTCTTGATACTGAGCACAAGAGACCCACTGCAGTGATGGCTCAAGCTTGCCTGC
CACCTGGCTTTCGTTTCCATCCAACTGATGTTGAGCTTGTTTCTTACTACTTGAAAAGGAAGATTATGGGGAAGAAACTT
TTTGTTGAAGCTATTTCAGAGGTTGAGCTGTACAAATTTGCTCCTTGGGACCTTCCTGGTAATTTTCCTCTATTGTTTTG
ATTTATCTTGATGTAAGAATTGCACCCGAATGAGTTGGAAACTAATCTAGAATTTTTCAAATGCTTCCACTTTAGTTGAG
TTTAGCTATTACTTTTGTTACAACCTTGTATGTTTCCGTGCAGATAAATCC-------TGTCTCCAGAGCAAAGATCTTG
AGTGGTTCTTCTTTTGTCCCCGTGACAAAAAATATCCTAAAGGGTCTAGGACGAACCGTGCCACACCAAATGGTTATTGG
AAAACAAGTGGAAAAGACAGAACAATTGAGCTGAACTCTCGCATTGTTGGGTTGAAGAAAACATTGATTTTTCATGAAGG
CAAGGCACCCAAAGGCAATAGGACTGATTGGGTGATGTATGAATACAAAATGGAAGATGAAACTTTGGTGTCTGCTGGTT
TCTCCAAGGTACTTCTAACTCTTATCTAATGTTTTTGTTTGTTTCACTTTATGTTGAATATGTTCAGTACAGTATATGAA
AGATTCTACCATACTGGAATATGTTTTGAGGCATGCTCTTTTGCTTGTGCCTGAAATTGTGCGTGATAAGTT-GCCTTTA
TATTTAGTTAGAAAGTTGTGATCCTAGTATTTCTTTCAAATTCTCTGCAAGTTTATTTAAATATATTTGTTGTTTGTTTG
TTTCAGGATGCTTATGTACTCTGCAAGATATTTAAAAAGAGTGGGCTTGGCCCAAGGATCGGCGAGCAATATGGGGCTCC
TTTTGATGAAAATGAATGGGAGAATTTAGATGTTGGATCTTCTATCTTCTCTTTTGCACCGTCCTCAGGTGTAGATGATC
CACAGGTTGAAAGTTCTGCTTTGGCTACTGCCATAGTTATGCAGGAACCATCCGCTCCTCAGCAGTCTGTTCAATTTTCT
GAACATGTTAATATCTGTTCTGATGAGGT---------------------------------------------------
--------------------------------------------------------------------------------
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-----
>SNPs
-----S-----------------------------------------------------S--------------------
--------------------------------------------------------------------------------
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--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------SSS-------S
--S------------S--------S---------SS----S-----------------------------------S---
------------------S--------------------------------------------SS--S--SSSS------
-----------S--------------------------------------S--------------------------SSS
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-S------------S----------S---------------------------------------S--------------
----S-----------------------------------------------------S---S----------------S
------------S--------------------------------------S--------------------S-------
----------SS---------------------------------S-------------------------S--------
----S---SSSSSSS--S-------S-----------------------------------S------------------
------------------------------------------S----S-------S-S------S-------S-------
-S---------------------------------S--------------------------------------------
-----S-----------------------------------------------S-SS-S---S-----------------
------S-----S----S-------------------S-------------------S----------S-----------
---S----S-S-------S--------------------------------SSSSSSS----------------------
---------------------S----------S--------------S-----------S-------S------------
------------------S----S-----S--------------------------------------------------
---------------------------------S-----------------------------S---------S------
----S--------S-------------S-------------S--------------------------------------
--------------------S---------------------------------------SS------------------
------------------------------------------------S--------S------------S---------
------------------------------------------------------------------------S-------
--------S----------------------------S---S------S-----------S------------------S
---------------------S--S-----------------S-------------------------------------
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_1826
--------------------------------------------------------------------------------
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----------------------------------------------TCCTTGAGTCTTGCCAAGCT--------------
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-----
>reverse_3840
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
AGAGGACGCCCTTGTCATG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----
