>input_sequence_61329
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATGGACTTGAAGAGGGTTAATGGTACTTCTCCAAAAAT
GCCGGCTAATGATGTGAGGAAAATAAAGAAGAGGATTTCACAGAGGATGCAAAGGACGGGGAGTATGCCACAGAGGATGC
AAAGGACGATGAGTGTGCCACAAAGGAAGCAAAGGGCGATGAGTTTGCAGCCTATAAGCGAGCTGTTGTTGGACGTGATG
GTGTGGGAGATCTTAATCCGGCTGCCCGTAGAGTCCCTGGTGAGGTTTAAGTTGGTTAGCAAGGCCTGGTACGCTATCAT
CTCCGACCCTGTTTTTGTTCGTGCGCACCTCCAGTGCTCCAAAGAGAAACAACATCGCAACCCGTCTTCCTTCCTCGTCA
CCCCCCAGATTTATCTGG--------------------------------------------------------------
---------------------------------------AACCAAATCCTTCCGGTCTTTTCTCCACCAACATCCGTTTC
TACCTGTGGTCTTTACAACAAGATGACATGAGCAGGAGC------------------------AGTAGTAGTGCAACACT
CCTTTATGGGAGGCAGTTCCCCACTGGTGAGTTTGGGCTGGTGTCACAAATGGCACACTGTGATGGATTGGTGTTGCTCC
CCACAAACACCAACACTTATGTCTTCAACCCAGCAACTAGAGATGTTGTTGCGCTGCCCAGGTGCCACCGCAATATGTTG
CAGCATCCAAGCTGCCTTCCAATTGGTTTGGGCCTTGATGTTTCCACCGGAACATACAAGGTTGCACGGTCTTTCTACCG
TTCCGGTGATTACAGTTCTGTTGCAATGGGGATGGAGGTCTTCACTATTAATGGTGAAGAGGGCAACTGGAGGGAAACGT
TGCTGGATCCACCATACCCTATTGTGTGTCCGCAAACTGCCATACACTGCAAGGGTTCCCTGTTCTATTTC-ATAGATAA
GAAAAATCAGCGATGCCCCGCGCAGGCGCTGCTTCGTTTCTGCCTTCAAGATGAAACATTTGGTATCACTCCATTGCTTA
ACAACGTGTACCCTACAGTTGAA---GATGATGATATTGTTCTCCATGAGCTTGATGGGGA---ATTATGTGCTACTTTC
TTTAGCAAGTGTGTGTGCAACGAGTATTGGTCTGGATGGCAAGAGATATTGTGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G179000
GCAATCACCGGTATTTCCTAGAAAATTTTTAATTCCCTGTGAAATTTTTAACGTACCATATTTGAGAAAAATCCGGGATG
TGATAACCAGGACCTGAACCCTGGTGGGCTGGGGATACCACTGCCCTCCTAACCATCCAATCACAGGTTGGTTCGCGCAT
GGGCATTTTTGCTAGTTAGTAAGAAAGCATCCTAAAAAAAGTCTTATTAATAAAGCATTTGCTTTCTCTCACAAAAAGAA
AACTGTAGCAGTTTTTTAAAAAAGTGTAGCATTGTTCCTCTAAGAGCAGCCAGTTGGGCCAGGCCAAGTTATCCGTGCGC
TGAATGGCTTCGTATGAGAGAGAGAGGGCTTCGCTAACAAGACGTGCGTGGGCTGGGCAAGTGAAACGAGTCAACGGAAC
GGTCCAGTAAGAACCCTACCCGATAAATTTCCTGAAATCCTGAAGCTCACGAACCGCCGCCGCTATCCCCCGATCCCCAA
TTGCGCCTCCACGCGCAAACCCTTTCCAATCGAGCTTGCAGCCATGGCCAGTCTGCTGGACGGCGACGATACCAACGGCA
ATAGAAGGATGTTTCCGGTAATTTCCGCCACACCTTAAACATTTTTTCTGTATTTTTCACTATATTTTTCTCTGAGAGAA
AAAAAAGCTTTTGACCGGATCTGAGTCACTTTGAGGTTTCAGATCTCACTGATTCCTTTGTTGCTGACAAAAAAAGAAAA
ACAATACTCCCTCCGATCCGAATTCGGATCGAAGGGCGTACGTAATTTGGTGCGTGTGTACTCCTATACTAAGACGGACA
CCGTGTCCGGAAAAGATACCCAACAGACCAGGGAGACCATGTTCGAATTCGGACATTAAACACGCAAATATCTTTATATA
TATCAATGTATTATCAGTATCTATCAATGTAT--GTGTATTCATGTCAGCGTAGGCAGTGCCGTGCATTGCATAGATAGA
TTATTAAGATCCTAGTTATATTTTTGTTTTGTTTCTTGCTGCATGGACTTGAAGAGGGTTAATGGTACTTCTCCAAAAAT
GCCGGCTAATGATGTGAGGAAAATAAAGAAGAGGATTTCACAGAGGATGCAAAGGACGGGGAGTATGCCACAGAGGATGC
AAAGGACGATGAGTGTGCCACAAAGGAAGCAAAGGGCGATGAGTTTGCAGCCTATAAGCGAGCTGTTGTTGGACGTGATG
GTGTGGGAGATCTTAATCCGGCTGCCCGTAGAGTCCCTGGTGAGGTTTAAGTTGGTTAGCAAGGCCTGGTACGCTATCAT
CTCCGACCCTGTTTTTGTTCGTGCGCACCTCCAGTGCTCCAAAGAGAAACAACATCGCAACCCGTCTTCCTTCCTCGTCA
CCCCCCAGATTTATCTGG--------------------------------------------------------------
---------------------------------------AACCAAATCCTTCCGGTCTTTTCTCCACCAACATCCGTTTC
TACCTGTGGTCTTTACAACAAGATGACATGAGCAGGAGC------------------------AGTAGTAGTGCAACACT
CCTTTATGGGAGGCAGTTCCCCACTGGTGAGTTTGGGCTGGTGTCACAAATGGCACACTGTGATGGATTGGTGTTGCTCC
CCACAAACACCAACACTTATGTCTTCAACCCAGCAACTAGAGATGTTGTTGCGCTGCCCAGGTGCCACCGCAATATGTTG
CAGCATCCAAGCTGCCTTCCAATTGGTTTGGGCCTTGATGTTTCCACCGGAACATACAAGGTTGCACGGTCTTTCTACCG
TTCCGGTGATTACAGTTCTGTTGCAATGGGGATGGAGGTCTTCACTATTAATGGTGAAGAGGGCAACTGGAGGGAAACGT
TGCTGGATCCACCATACCCTATTGTGTGTCCGCAAACTGCCATACACTGCAAGGGTTCCCTGTTCTATTTC-ATAGATAA
GAAAAATCAGCGATGCCCCGCGCAGGCGCTGCTTCGTTTCTGCCTTCAAGATGAAACATTTGGTATCACTCCATTGCTTA
ACAACGTGTACCCTACAGTTGAA---GATGATGATATTGTTCTCCATGAGCTTGATGGGGA---ATTATGTGCTACTTTC
TTTAGCAAGTGTGTGTGCAACGAGTATTGGTCTGGATGGCAAGAGATATTGTGAATCCGGAGTGGGATTGCCATTATGTA
ATCAATGTCTCAGATCACTGCTGTCCAGTGGCCTCACTTAGCATCACTGGTGGGTTTCTCTTACGAAGAGGTGATTGTCT
TATCCGTTATTACATGAAAGCTCATGGTGTAAAAGAAGAGGATACGTTTGATATGGGTGACCAAAGGTTCCTTGGGCCCA
GTGAAGATACCTTGGGCCATGCATGGGAAAATTTATGTGTGTTTGAACTACTTTATTACACTGCAAGCCTTGTTCCTATT
ACTCCTAAGGCGAGCTTACAAGCCTTATAAGATGTTGGATTGTCTACAAACTCATGCCTACCTTATTCAATGGATCATG-
AATGTTTCTCTCAGGCAAAGGATGAATAAGATGAATCATGATGACGATTTACAGAGTCTGTTTAATGTTGTACGGGGCAC
TTAAACAAGCTCCTCTTCATGTTTTTC-CTGTTGCTTTCATGCAAACTGTATTCTTATGGTGGTCTTGGG-TTGTATCAA
AGTCTCAAATTTCAAATTCTGTT---TCTGTGGAACTGATTCTCTATTG----------AATAATTATCAAGTTAATCGT
TATGTCATCTGTTGGATTATGTAGCCTGCAAATTCTGTAGTTCTCTTGTTTCTGGATCTGCTATCTGCTAGTGCTACTTT
AAAGGGAGACCATCATCTTGTTTCTTATGCAAGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ATACTATTTGTAGACATGATGCGTCTACATTGAACATAACTCAGGTTTCAAGATAGATTTAGATTCTCATATACTTAA
TAAAGTGCATTTCTATTTTAAACATTACAGAACTTGTAGATAAATGAAGCATGAGTACAAAAGAGATTGCATAAAATTAT
TAGACCAGTTAAGAGATTACTAGCGGGCAAAGGCTCTGCGTGTCGCCGCGCCTGTCGAGAAGCCCATGTGTGTATTTATA
TTTTTGCGGTCGAGCAATCGGAAGAAGTGTTAGTGCTTTTTATGTTTGGATTTTGCAATCTGAGTATCTACCTATTTG
>chr3B_1
GCAATCATCGGTATTTCCTAGACATTTTTTAATTCCCTATGAAATTTTTAACATACCATATTTGAGAAAAATCCGGGATG
TGATAACCAGAACCTGAACCCTGGTGGGCTGGGGATACCACTGCCCTCCTAACCATCCAATCACAGGTTGGTTCGCGCAC
GGGCATTTTTGCTAGTTAGTAAGAAAGCATCCTAAAAAAAGTCTTATTAATAAAGCATTTGCTTTCTCTCTCAAAAAGAA
AACTGTAGCAGTTTTTTTAAAAAGTGTAGCATTGTTCCTCTAAGAGCAGCCAGTTGGGCCAGGCCAAGTTATCCGTGCGC
TGAATGGCTTCGTATGAGAGAGAGAGGGCTTCGCTAACAAGACGTGCGTGGGCTGGGCAAGTGAAACGAGTCAACGGAAC
GGTCCAGTAAGAACCCTACCCGATCAATTTCCTGAAATCCTGAAGCTCACGAACCGCCGCCGCTATCCCCCGATCCCCAA
TTGCGCCTCCACGCGCAAACCCTTTCCAATCGAGCTTGCAGCCATGGCCAGTCTGCTGGACGGCGACGATACCAACGGCA
ATAGAAGGATGTTTCCGGTAATTTCCGCCACACCTTAAACATTTTTTCTGTATTTTTCACTATATTTTTCTCTGAGAGAA
AAAAAAGCTTTTGACCGGATCTGAGTCACTTTGAGGTTTCAGATCTCACTGATTCCTTTGTTGCTGACAAAAAAAGAAAA
ACAATACTCCCTCCGATCCGAATTCGGATCGAAGGGAGTACGTAATTTGGTGCGTGTGTACTCCTATACTAAGACGGACA
CCGTGTCCGGAAAAGATACCCAACAGACCAGGGAGACCATGTTCGAATTCGGACATTAAACACGCAAATATCTTTATATA
TATCAATGTATTATCAGTATCTATCAATGTAT--GTGTATTCATGTCAGCGTAGGCAGTGCCGTGCATTGCATAGATAGA
TTATTAAGATCCTAGTTATATTTTTGTTTTGTTTCTTGCTGCATGGACTTGAAGAGGGTTAATGGTACATCTCCAAAAAT
GCCGGCTAATGATGTGAGGAAAATAAAGAAGAGGATTTCACAGAGGATGCAAAGGACGGGGAGTATGCCACAGAGGATGC
AAAGGACGATGAGTGTGCCACAAAGGAAGCAAAGGGCGATGAGTTTGCAGCCTATAAGCGAGCTGTTGTTGGACGTGATG
GTGTGGGAGATCTTAATCCGGCTGCCCGTAGAGTCCCTGGTGAGGTTTAAGTTGGTTAGCAAGGCCTGGTACGCTATCAT
CTCCGACCCTGTTTTTGTTCGTGCGCACCTCCAGTGCTCCAAAGAGAAACAACATCGCAACCCGTCTTCCTTCCTCGTCA
CCCCCCAGATTTATCTGG--------------------------------------------------------------
---------------------------------------AACCAAATCCTTCCGGTCTTTTCTCCACCAACATCCGTTTC
TACCTGTGGTCTTTACAACAAGATGACATGAGCAGGAGC------------------------AGTAGTAGTGCAACACT
CCTTTATGGGAGGCAGTTCCCCACTGGTGAGTTTGGGCTGGTGTCCCAAATGGCACACTGTGATGGATTGGTGTTGCTCC
CCACAAACACCAACACTTATGTCTTCAACCCAGCAACTAGAGATGTTGTTGCGCTGCCCAGGTGCCACCGCAATATGTTG
CAGCATCCCAGCTGCCTTCCAATTGGTTTGGGCCTTGATGTTTCCACTGGAACATACAAGGTTGCACGGTCTTTCTACCG
TTCCGGTGATTACAGTTCTGTTGCAATGGGGATGGAGGTCTTCACTATTAATGGTGAAGAGGGCCACTGGAGGGAAACGT
TGCTGGATCCACCATACCCTATTGTGTGTCCGCAAACTGCCATACACTGCAAGGGTTCCCTGTTCTA-TTC-ATAGATAA
GAAAAATCAGCGATGCCCCCCGCAGGCGCTGCTTCGTTTCTGCCTTCAAGATGAAACATTTGGTATCACTCCATTGCTTA
ACAACGTGTACCCTACAGTTGAAGATG---ATGATATTGTTCTCCATGAGCTTGACGGGGA---ATTATGTGCTACTTTC
TTTAGCAAGT--GTGTGCAACGAGTATTGGTCTGGATGGCAAGAGATATTGTGAATCCGGAGTGGGATTGCCATTATGTA
ATCAATGTCTCAGATCACTGCTGTCCAGTGGCCTCACTTAGCATCACTGGTGGGTTTCTCTTACGAAGAGGTCATTGTCT
TATCCGTTATTACATGAAAGCTCATGGTGTAAAAGAAGAGGATACGTTTGATATGGATGACCTAAGGTTCCTTGGGCCCA
GTGAAGATACCTTGGGCCATGCACGGGAAAATTTATGTGTGTTTGAACTACTTTATTACACTGCAAGCCTTGTTCCTATT
ACTCCTAAGGCGAGCTTACAAGCCTTATAAGATGTTGGATTGTCTACAAACTCATGCCTACCTTATTCAATGGATCATG-
AATGTTTCTCTCAGGCAAAGGATGAATAAGATGAATCATGATGACGATTTACAGAGTCTGTTTAATGTTGTACGGGGCAC
TTAAACAAGCTTCTGTTCATGTTTTTC-CTGTTGTTTTCATGCAAACTGTATTCTTATGGTGGTCTTGGG-TTGTATCAA
AGTCTCAAATTTCAAATTCTGTT---TCTGTGGAACTGATTCTCTATTG----------AATAATTATCAAGTTAATCAT
TATGTCATCTGTTGGATTATGTAGCCTGCAATTTGTGTAGTTCTCTTGTTTCTGGATCTGCTATCTGCTAGT------TT
AAAGGGAGACCATCATCTTGTTTCTTATGCAAGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ATACTATTTGTAGACATGATGCGTCTACATTGAACATAACTCAGGTTTCAAGATAGATTTAGATTCTCATATACTTAA
TAAAGTGCATTTCTATTTTAAACATTACAGAACTTGTAGATAAATGAAGCATGAGTACAAAAGAGATTGCATAAAATTAT
TAGACCAGTTAAGAGATTACTAGCGGGCAAAGGCTCTGCGTGTCGCCGCGCCTGTCGAGAAGCCCATGTGTGTATTTATA
TTTTTGCGGTCGAGCAATCGGAAGAAGTGTTAGTGCTTTTTATGTTTGGATTTTGCAATCTCAGTATCTACCTAGTTG
>chr3A_473
ATCGCCAACA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GCGCCTCCACGCGCAAACCTTTTCCAGTCCAGCTTGCAGCCATGGCCAGTCCGCTGGACGGCCACGACACCAACGGGA
ACAGAAGGATGTTTCCGGTAATTTCCGCCACACATTAAA-ATTTCTTCTCTATTTTCACTC-TATTTTTCTCCGAGAGAA
ACAAAAGCTTTTGACCAGATCTA-------TTGAGGTTTCAGATCTCACTGATTCCTTTGTTGCCGACAAAAAAGGAAAA
AAAGAA------------------------------------TAATTTGGTGCGT-----CTCCTATACTAAGACGGACA
CCTTGTCCGGGAAAGATACC-AACAGGCCAGGGAG--------------------------ACGCACATATCTATATATA
TACACATATTTTATCGGTATCTATCAATGTATATGTGTGTTCGTGTCAGCGTAGTCAGTGCCGTGCATTGCATATAGAGA
TTATTAAGATCCTAGTTATATTTTGGTTTTGTGTCTTGCTGCATCGACTTGATGGGGGTTAATGGTACATTCCCAAAGAA
ATCGGCTAATGGTGCAAGGAAAATAAAGAAGAGGAAGTCACAGAGGATGCAAAGGACGGGGAGTGTGCCACGGAGGA---
---------------------------AACAAAGGACAATGAGTTTGCAGCCTATAAGGGAGCAGTTGTTGGACGTGATG
GTGTGGGAGATCTTGATCCGGCTGCCCGTGGAGTCCCTGGTGAGGTTTAAGTTGGTTAGCAAGGCCTGGTACGCTATCAT
CTCTG-CCCTGTTTTTGTTCGTGCGCACCTCCACTGCTCCAAACAGAAACAACAACACAACCCGTCTTCCTTCCTCGTCA
CCCCCTACATTTATCTGG--------------------------------------------------------------
---------------------------------------AACCAAATCCTTCGGGTCTTTTCTCCACCAACATCCGTTTC
TACCTGTGGTCTTTACAACAAGATGACATGAGTAGGAGC------------------------AGTAGTAGTGCAACACT
CCTTTATGGGAGGCAGTTCCCCATTGGCGAGTTTGGGCTGGTGTCCCAAATGGCACACTGTGATGGGTTGGTGTTGCTCC
CCACAAACACCAACGCTTATGTTTTCAACCCAGCCACTAGAGATGCTGTTGCGCTA-CCAGGTGCCACCGCAATATGTTG
CAGCACTCCACATGCCTTCCGATTGGTTTCGGCCTTGATGTTTCCACTGGAACATATAAGGTTGCACGGTCTTTCTACCG
TTCCTGTGATTGCAGTTCTGTTGCAATGGGAATGGAGGTCTTCACCATTAATGGTAACGAGGGCAACTGGAGGGAAACCT
T-----------------------------------------------GCAAGGGTTCCCTATTCTATTTC-ATAGATAA
GAAAATTCAACAATGTCCCCCGCAGGCGCTGCTTCGTTTCTGCCTTCAAGATGAAACATTTGGTATCATTCCATTGCTTA
ACAACGGGTACCCTACAGTAGAAGATGATGATGATATTGTTCTCCATGAGCTTGATGGGGA---ATTATGTGCTACTTTC
TTTAGCAAGT--GTGTGCAACGAGTATTGGTCTGGGTGGCAAGAGATATTGTGAATCCAGAGTGGGATTGTCATTATGTA
ATCAATGTCTCAGATCACTGTTGTCCAGTGGCCTCACTTAGCATCGCTGGTGGGTTTCTCTTACGAAGAGGTCATTGTCT
AATCCATTATTACATGAAAGCTCATGGTGTAAAAGAAGATGATATATTTGATATGGATGACCTAAGGTTCCTTGGGCCCA
GTGAAGACACCTTGGGCCATGCATGGAAAAATTTATGTGTGTTTGAGCTACTTTATTACACTGCAAGCCTTGTTTCTATT
ACTCCTAAGGAGGTCTTACAAGCTTCATAAGATGTAGGATTGTCTACAAACTCATGCCTACCTTATTCAAGGGAACATCA
AATGTTTCTCCCAGGCAAAGGATGAATAAGATGAATCATGACGATGATTTACCGAGTCTCATTAATGTTGTGCGGGGCTC
TTAAACAAGCTCATGTGCATGTTTATTTCTGTTGTTTTCATGCAAACTATATTCTTATAGTGGTCTTGGGTTTTTATCAA
AGTCTCCAAGTTTCAAATTATATTTCTCCGTGGAACTGATTCTCTATTG----------AATCATTATGTTAGTTGTTT-
--------------GATTATGTAGCCTGCAATTTGTGTAGTTCTCTTGTTTCCGGATTCTGCTA---CTACT------TA
AAAGAGAGACCATCATCTTATTTCTTTTGCAAGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ATACTATTTGTTGTCATGATGTATCTATGTTGAACATAAC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr3D_763
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TAATTTGGTGCGT-----CTCCTATACTAAGACGGACA
CCGTGTCCGGGAAAGATACC-AACAGGCCAGGGAG--------------------------ACGCACATATCTGTATATA
TACACATACAC---------------------------GTTCGTGTCAGCGTAGCCGGTGCCGTGCATTGCATATACAGA
TTATTAAGATCCTAGTTATATTTTGGTTTTGTTTCTTGCTGCGTGGACTTGAAGGGGGTTAATGGTACATTTCCAAAGAA
GTCGGCTAATGATGC-AGGAAAATAAAGAAGAGGAAGTCACAGAGGATGCAAAGGACGGGGAGTGTGCCACAGAGGA---
---------------------------AGCAAAGGACGATGAGTTCGCAGCCTATAAGCGGGCTGTTATTGGACGTGATG
GTGTGGGAGATCTTGATCCGGCTACCCGTGGAGTCCCTGGTGAGGTTTAAGTTGGTTAGCAAGGCCTGGTACGCTATCAT
CTCTGACCCTGTTTTTGTTCGTGCGCACCTCCACTGCTCCAAACAGAAACAACAACGCAACCCATCTTCCTTCCTCGTCA
CCCCCCACATTTATCTGG--------------------------------------------------------------
---------------------------------------AACCAAACCCTTTGGGTCTTTTCTCCACCAACATCCGTTTC
TACCTGTGGTCTATACAACAAGATGACATGAGTAGGAGC------------------------AGTAGTAGTGCAACACT
CCTTTATGGGAGGCAGTTCCCCACAGGCGAGTTCGCACTGGTGTCCCAAATGTCACACTGTGATGGGTTGGTGTTGCTCC
CCACAAACACCCACGCTTATGTCTTCAACCCAGCCACTAGAGATGCTGTTGCGCTCCCCAAGTGCCACCGCAATATGTTG
CAGCACTCCACTTGCCTTCCGATTGGTTTC-GCCTTGATGTTTCCACTGGAACATATAAGGTTGCACGGTCTTTCTACCG
TTCCTGTGATCACAGTTCTGTTGCAATGGGGATGGAGGTCTTCACCATTAATGGTGACGAGGGCAACTGGAGGGAAACCT
TGCTGGATCCACCATACCCTATTGTGTGTCCACAAACTGCCATACACTGCAAGGGTTCCCTATTCTA-TTTAATAGATAT
GAAAAATCATCAATGTCCCCCGCGGGCGCTGCTTCGTTTCTGCCTTCAAGATGAAACATTTGGTATCACTCCATTGCTTA
ACAACGTGTACCCTACAGTTGAAGATGAT---GATATTGTTCTCCATGAGCTTGACGGGGA---ATTATGTGCTACTTTC
TTTAGCAAGT--CTGTGCAACAAGTATTGGTCTGGATGGCAAGAGATATTGTGAATCCAGAGTGGGATTGCCATTATGTA
ATCAATGTCTCAGATCACTGCTGTCCAGTGGCCTCACTTAGCATCGCTGCTGGGTCTCTCTTACGACGAGGTCATTGCCT
AATCCGTTATTACATGAAAGCTCATGGTGTAAAAGAAGAGGATATATTTGATATGGATGACCTAAGGTTCCTTGGGCCGA
GTGAAGACACCTTGGGCCATGCATGGGAAAATTTATGTGTGTTTGAGCTACTGTATTACACTGCAAGCCTTGTTTCTATT
ACTCCTAAGGCGAGCTTACAAGCCTCATAAGATGTAGGATTGTATACAAACTCATGCCTACCTTATTCAATGGAACATCA
AATGTTTCTCCCAGGCAAAGGATGAATAAGATGAATCATGACGACGATTTACCGAGTCTCTTTAATGTTGTACGTGGCAC
ATAAACAAGCTCATGTGCATGTTTTTTCATGTTGTTTTCATGCAAACTATATTCTTATAGTGGTCTTGGG-TTTTATCAA
AGTCTCCAAGTTTCAAATTCTGTTTCTCCGTGGAACTGATTCTCTGTTCAATCATTATCAATCATTATGTTAGTTGTTT-
--------------GATTATGTAGCCTGCAATTTGTGTAGTTCTCTTGTTTCTGGGTTCTGCTA---CTACT------TA
AAAGAGAGACCATCATCTTCTTTCTTTTGAAAGAACTAGCGGGGGGTCACCCGCGCATTTGCACGGCTAGATTTTTTCAA
TTTACAATTTCACATGCTAGAAGCTATGTTTTGTTCTATCATAAGTTTTCAAATTATTGATTGAGCTCATTTAGTTCATT
CTTAAGGTGTGTTAAAACTCATTATTTTTTTAACTAATAACGAATAATATAGAACCATTAAATTTAAATATGTATGTATG
AAAAAAACATTTTCAATTCACAAATATGGTCCGAGAATGTATTTACTTGTGGGCATGCATTTGTGCCCTCGGTTTTTCTA
ATTCATAATTTCATATGTTAGAACCTATATTTTGTCATTTTAAATGTATTTTAGATTTTAAAATAAACATTTCGTACTAT
CATAATTTTTAAAAGTATGGATTGAGCTAATTTAGTTCATGCGTAAGTTGTGTTGAAGCTAATGAATGCTTTCTCACTGA
TAACGCATAATATACAATGGTTAAATTTAAATATGTATATGTAAAAAGGTACATCTTCGGTTCAAACATATAGTCATGAA
TGATATACTTATGTTATGCATTGGTGATGCCTTTGTCGGTACATTACCTAAGAATATATGTGTTTTTTCATTAGGGAAAT
TGTACTGATAACTTTTTTTTTTACTCTTTCCTAGCCATGGACAATGGTGTGTGGAAGCTTGCTATCCATGTGCCAGAGCC
ATGAGTAGGTCGCGAGATCTTGTGGGTTTCACCTCTAGCCTATCCCAACTTGTTTGGGACTAAAGACTTTGTTGTTGTTT
TCCCACAAAAAATAAGACTTTGTTGTTGGTGTTTCCTTGAGAAACATGTATTTTCTCTGAGTTCAATCACCATGCAAAGT
ATGTAGCCACTCCATATATAGTGTTGTGTGTAGTATTTTTTATCTTTATGAGTTAAATCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTATAGATAGATAATAGAAGATACATAGATAGATAGATAGATAGATAGAT
AGATACTATTTGTCGACTTGATGCATCTACATTGAACATAACCCAGGTTTCTAGGTAGATTTAGATTCTCATATACTAAC
----GTGCATTTCTATTTTAAACATTACAGAACTCACAGATAAATGAAGCATGAGTACAAA-GAGATTGCATACAATAAA
TAGACCAATTAAGAGATACT------------------------------------------------------------
------------------------------------------------------------------------------
>chr3B_1134
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGCCACAGAGGAAGCAAACGAAGAGGTCTGGACATCCTGCAGGCGAGGAATTGTTGGACGAGATG
TTGTGGGAGATCTTAATCCGGCTGCCTGTGGAGTCGCTGGCTAGGTTCAAGTTGGTTAGCAAGGTCTGGTACACCATTAT
CTCCCAACCTGTTTTTGTTCGTGCACACCTCCAACGCTCCAAACAGAAACAACATCACAATCCGTCTTCCTTCCTCATCA
CCCCCCAGATTTATCTAG--------------------------------------------------------------
---------------------------------------ATTCCAATCCCTCAGGCATTTTTTCCACCAACATCCGTTTC
TTCCAGTGGTCTTTACAAGAAGATGATTTGCCAAAAGTAGCAACAAAAGTTGGAATGAGTCATAGTAGTAGCGCAATGCT
TCTTCATGGGAGGCACTTCCCGGCTGGCGAGTTTGGGTTGGTGTCCCAGATGGCACACTGCGATGGGTTGGTGCTGCTCC
CTACAGACACCAATGCTTATGTCTTCAACCCGGCCACTAGAGATGGCATTGCTCTGCCGAGGAGTCATCACAACGTGTTG
CAACGTCCCGTATGCCTTCCCATTGGTTTGGGCCTTGATGTTTCCACTGGCACATATAAGGTTGCACGGTCTTTCTTCCG
TTCATGTGATTACAATTCCGTTGCAATGGGGATGGAGGTCATCACCATTAATTGCGGAGAGGGGTCTTGGAGGGAAACCT
TGGTGGATCCACCGTACCTTATCCTTTGTCCGCAAACTGCCATACACTGCAAGGGGTGTCTATTCTATTTC-ATCGATAG
GGAAAATCAGCCATGCTCCCCACGGGGGCTGCTTCGTTTCAGCCTTCAAGACGAAACTTTCGGCATCACTCCGTTGCTTA
ACAACCTCTACCCTACAGTTGAAGATGAA---GATATTGTTATCCATGAGCTTGGTGGGGAACTATGC---GCTACTTTC
TTCTGCAAGA--GTATGCAACGAGTATTGATCTCGATGACAAGAGATATATTGGTCCCGGAATGGGAATGTCACTATGTA
ATGAATGTTTCAGACCAGTGCTTGCCAATGGCCTCACTTAGCAA---TGGCGGGATTCTTCTACGGAGAGGCCATTGTCT
CTTCCGTTATTACATGAAGGATCATGGTGTAAAAGAAAATGACATGTTCGATATCGATGAGCTAAGGTTCCTTGGGCCTA
GTGAAGACACATTGGGACATGCATGGGAAAATTTATTTTGGTTCGACCTACTCTATTACACGCCAAGTCTTGTTCCAGTT
ACTCCTAAGGCGAGCTTACATGCCTCATAAGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr3B_1134
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGCCACAGAGGAAGCAAACGAAGAGGTCTGGACATCCTGCAGGCGAGGAATTGTTGGACGAGATG
GTGTGGGAGATCTTAATCCGGCTGCCTGTGGAGTCGCTGGCTAGGATCAAGTTGGTTAGCAAGGTCTGGTACACCATTAT
CTCCCAACCTGTTTTTGTTCGTGCACACCTCCAATGCTCCAAACAGAAACAACATCACAATCCGTCTTCCTTCCTCATCA
CCCCCCAGATTTATCTACTCCCTCCGTCCCAAAATAAGTGTCTTGAGCTTAGTACAAATTTGTATTTGTACTAGAGCTAG
TACAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTACATTCCAATCCCTCAGGCATTTTTTCCACCAACATCCGTTTC
TTCCAGTGGTCTTTACAAGAAGATGATTTGCCAAAAGTAGCAACAAAAGTTGGAATGAGTCATAGTAGTAGCGCAATGCT
TCTTCACGGGAGGCACTTCCCGGCTGGCAAGTTTGGGTTGGTGTCCCAGATGGCACACTGCGATGGGTTGGTGCTGCTCC
CTACAGACACCAATGCTTATGTCTTCAACCCGGCCACTAGAGATGGCATTGCTCTGCCGAGGAGTCATCACAACGTGTTG
CAACGTCTCGTATGCCTTCCCATTGGTTTGGGCCTTGATGTTTCCACTGGCACATATAAGGTTGCACGGTCTTTCTTCCG
TTCATGTGATTACAATTCCGTTGCAATGGGGATGGAGGTCATCACCATTAATTGCCGAGAGGGGTCTTGGAGGGAAACCT
TGGTGGATCCACCGTACCTTATCCTTTGTCCGCAAACTGCCATACACTGCAAGGGGTGTCTATTCTATTTC-ATCGATAG
GGAAAATCAGCCATGCTCCCCACAGGGGCTGCTTCGTTTCAGCCTTCAAGACGAAACTTTCGGCATCACTCTGTTGCTTA
ACAACCTCTACCCTACAGTTGAAGATGAA---GATATTGTTATCCATGAGCTTGGTGGGGA---ATGC---GCTACTTTC
TTCTGCAAGA--GTATGCAACGAGTATTGATCTGGATGACAAGAGATATATTGGTCCCGGAATGGGAATGTCACTATGTA
ATGAATGTTTCAGACCAGTGCTTGCCAATGGCCTCACTTAGCAA---TGGCGAGATTCTTCTACGGAGAGGCCATTGTCT
CTTCCGTTATTACATGAAGGATCATGGTGTAAAAGAAAACGACATGTTCGATATCGATGAGCTAAGGTTCCTTGGGCCTA
GTGAAGACACATTGGGACATGCATGGGAAAATTTATTTTGGTTCGACCTACTCTATTACACGCCAAGTCTTGTTCCAGTT
ACTCCTAAGGCGAGCTTACATGCCTCATAAGA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>SNPs
-------S--------------S-S-------------S-------------S---------------------------
----------S--------------------------------------------------------------------S
----------------------------------------------------------------------S---------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------S--------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
----------SS--------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------S-----S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-------------------S---------------------------------------------
------------------------------------------------------------------------------S-
-------------------------------S--S-------------------------------------SSSSSS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------S---
>forward_91
-----------------------------------------------------------------------TCCGGGATG
TGATAACCAGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1808
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGGAACATACAAGGTTGCACG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GTGAGTTTGGGCTGGTGTCA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2873
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------GCTACTTT
AAAGGGAGACCATCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
