>input_sequence_61254
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-----------------------------------------------------------------------ATGATAAGG
AGGAGGATGGGGGCACTGCACGTCGGCGAGCCGCGGGTCAGCTTCCAGCAGCAGGTCGGCAAGAACGGCGGGGGCCACGG
CGCCGTCGTGGAGGAGATACACGGGCTCATCCGCGTGTACAAGGACGGGCACGTGGAGCGCCTCCCGGCGATCCCCGACG
TGCCCTGCACGTGGGGCTCGACGGCCGCCGGGAGCGGCGTCCTCGCGCGCGACGTGGCGGTCGACCGCGCCACGGGGGTG
TGGGCGCGCCTGTACGCGCCGGCCGCCGCGGCGGGGAAGGTCCCCGTGGTGGTCTACTTCCACGGCGGCGGGTTCAGCGT
CGGCTCCGCGGCGTGGAGCTGCTACCACGAGTTCGTCGCCCAGCTCCCCGCGCGGGCGGGCTGCGCCGTGATGTCCGTCG
ACTACCGCCTGGCGCCGGAGAACCGGCTGCCCGCGGCCTTCGACGACGGGCTCACGGCGCTGCGGTGGCTGCGGCAGCAG
GCGGGCAGAAACAACGCCGCCGCCTCCGACGAGGTCTCCTGGTGGCGCGGCCGGTGCAGGTTCGACCGCGTGTTCCTGAT
GGGCGACAGCGCGGGCGCCGCCATCGCGTTCCACGTCGCGGCGCGGGCCGGGCAGGGCCAGCTGGGCGCGCTGGCGCCGC
TCTCGGTGAAGGGGGCCGTACTGATCCAGCCCTTCTTCGGCGGGGAGGCCCGCACGGCGTCGGAGAAGAGCATGCCGCAG
CCAGCGGGGTCGGCGCTGAGCCTCTCCACCTCGGACAGCTACTGGCGCATGGCGCTCCCGGCGGGCGCCGGGCGCGACCA
CCCCTGGTGCAACCCGCTGGCCCGCGGCGCGCCCCGGCTGGAGGCCCTGGCGCTGCCGGCCGTGCTGGTGTGCATCTCGG
AGGCGGACATCCTGCGCGACCGGAACCTGGAGCTGTGCAGGGCGCTGCGCAAGGCCGGCAAGAGCGTGGAGCAGGCGACG
TACGGCGGCGTGGGGCACGCCTTCCAGGTGCTCCACAACTGCCACCTGTCCCAGCCGCGCACGCAGGAGATGCTCGCCCA
CATCCGGGCCTTCGTCAGCGCCAGGTCCAGCTGA----------------------------------------------
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---------------------------
>chr4A_1_TraesCS4A01G085300
CCAACCAATACCGTCTTTGGATGTTTGATTGTTGTGCTCGTCATGGATTACGAGATGCCCCTTCGCCTTGCTACACTTGC
CTACAAGATGAAGAGAATGTTGACCATATCTTGGCCCTCTGCGGTTACGCAAGAGAAGTGTGGCATTCGTGCTTTCATGC
GCTGAGAATCAACATCCAAGCTCCGTCCACGGAAGTAACATTCATAGAGTGGTGGCTACACCAACGACTGCGTTTCAACA
GGAAGATGCGAAGAGGATTCGACTTCATAACCATAGAAATTGCTTGGGCTCTTTTGAAAGAATGTAACACAAGAGTGTTC
AACAACATCTCGAGACAGAAAACAGTGCCACAACTCAAGA---CGAAAATACTTGACGAGATTGATGAATGGAGGAAGGC
CGGTCTGAGCGGCGTTGGTGTTTTAGATCCTCTCGTGAGAGAGTAGTCTTCATGTATCTAGGGTGCAAGCCTGGGTCTGT
TGGCTA-CCTACGAGATGTTCGCATCATGTTAGGGCTCATGTACATAACTATCTGCTTTCTGTAAAAATATGATACGTCA
TTGATATACTCTTGAAAAAAAA----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------AGTGTAGAGGCTCTTTAGGAACACGACGAGCCGATAGACA
GCGTGCAAACGACCGAAGCGTCCCAAGTGTTCCTACACGGTGGACTTTTGCGGGGGTCGCTCACGAGACGAATGGATCAT
TTCACACACTTCGCCGTGTGCGCGAATCACCCACCC-----CCACCCCCACTTTGCGAGTCCACTCGATCGCTCGGCAGC
CAAAGCCAGCCCGACACCTGTCCCACCGTCCCCCTCCCGGCTATAAAACCCGGCCACCGCCCGAGCTCCCCGGACAACGC
CGCATAATTGTGTCCGCCGCCGGCTCCCGGGACACCCCACAGCGCACAGACAACCCAAGGCCTAG---CACCACTCTCGT
TGTCTAGCGCCTGCCGGCCGGCCGCGCCGCTCGC-ATCGATCCAAGCCGACGCGCGCGCGAGGGCTTCTGCATGATAAGG
AGGAGGATGGGGGCACTGCACGTCGGCGAGCCGCGGGTCAGCTTCCAGCAGCAGGTCGGCAAGAACGGCGGGGGCCACGG
CGCCGTCGTGGAGGAGATACACGGGCTCATCCGCGTGTACAAGGACGGGCACGTGGAGCGCCTCCCGGCGATCCCCGACG
TGCCCTGCACGTGGGGCTCGACGGCCGCCGGGAGCGGCGTCCTCGCGCGCGACGTGGCGGTCGACCGCGCCACGGGGGTG
TGGGCGCGCCTGTACGCGCCGGCCGCCGCGGCGGGGAAGGTCCCCGTGGTGGTCTACTTCCACGGCGGCGGGTTCAGCGT
CGGCTCCGCGGCGTGGAGCTGCTACCACGAGTTCGTCGCCCAGCTCCCCGCGCGGGCGGGCTGCGCCGTGATGTCCGTCG
ACTACCGCCTGGCGCCGGAGAACCGGCTGCCCGCGGCCTTCGACGACGGGCTCACGGCGCTGCGGTGGCTGCGGCAGCAG
GCGGGCAGAAACAACGCCGCCGCCTCCGACGAGGTCTCCTGGTGGCGCGGCCGGTGCAGGTTCGACCGCGTGTTCCTGAT
GGGCGACAGCGCGGGCGCCGCCATCGCGTTCCACGTCGCGGCGCGGGCCGGGCAGGGCCAGCTGGGCGCGCTGGCGCCGC
TCTCGGTGAAGGGGGCCGTACTGATCCAGCCCTTCTTCGGCGGGGAGGCCCGCACGGCGTCGGAGAAGAGCATGCCGCAG
CCAGCGGGGTCGGCGCTGAGCCTCTCCACCTCGGACAGCTACTGGCGCATGGCGCTCCCGGCGGGCGCCGGGCGCGACCA
CCCCTGGTGCAACCCGCTGGCCCGCGGCGCGCCCCGGCTGGAGGCCCTGGCGCTGCCGGCCGTGCTGGTGTGCATCTCGG
AGGCGGACATCCTGCGCGACCGGAACCTGGAGCTGTGCAGGGCGCTGCGCAAGGCCGGCAAGAGCGTGGAGCAGGCGACG
TACGGCGGCGTGGGGCACGCCTTCCAGGTGCTCCACAACTGCCACCTGTCCCAGCCGCGCACGCAGGAGATGCTCGCCCA
CATCCGGGCCTTCGTCAGCGCCAGGTCCAGCTGACAGGCAGACACCACTCCTCCGCCGTGCCATGTCAGTGTCACCCGCC
GATTAATTACT------------TAATCCACTACCAGTTCCAG--------AGTAGATGCCGTGTAAGCAGTATTAGCAG
TAGCTTGTGGTACTCGCCCAAGTGAAGGAAAAGACAAGAAGAAAAGGGTCCAATGCCGAACTTGGATC----------GT
GGTGTCGGAAAGCAAAAGTGTGGCGCAAAAATAACACTTT-----------CTCCATGT--ATGTATGTGTATCGTGTTG
TTCATTGTACTCCTACTTACTTGCAAAGGCGGATCAATATATATATATATATTATTATTATTACTACTGC--------TT
GTCTTGTTTAAGTAACAACTCGGCTGACGGTGTT-GCATGATGAGGGAAGCAAGAAAAGGCTCCGGGAACAAAAAA---T
CATTGTCTGCTTGTCTGGCGCTTTGCGCTTTGCACTAGCCCCTTCTTTTTTTCTATGTTTCCCGTCGCTGCTTTGGGAAG
GTTCAGGCTTTGCTTGCTTGCTTGATGATGGAGCCCGGGACTTGTCTAAGCAGCGCAATCATCAGCCGGC---TAGATTT
TAGGCTGGCACATGCACCTGGTAAGAACAGAATAGAATCTCGGATACGTTTCCCGATGGGAGGCCGGCCATCACATGAGC
CCCAACCGCAGCGCAACGACACAAGTGC-GGTGCGAC--CGGGCGCTAGTGCCGCTGCTGCAATGATGCAT-CAGACAAG
CCTGTCGATCACTGTAAGGAAGCCTCGAGTGTATATGTT--------------------TTCTGCGGCTTGTAAACTGGA
AGGCACGCAGCGCTCTT---------------------------GTTGTTGTTGTACGTGGTATCATTGCTTGGTTGCCT
GTCTCACCAACCACATCATGGCGGCCGGCAAACAATC----GCGTGCAAGCAGGCCAACATCATGCGTGATCATCTGAGA
AGAGACTCGAGCGGCAGCATTGGGAAGTCTAGCCACAATGCACATGATAGATAATAAGTCAGTTGCTTGGTCGCCCGCGG
AATGATAGACTGAGACCATGCATATGT
>chr6D_5
----CCAATACCGCTTATGGACGTCTGGTCGACGGGCCCTCCATGGATTACAGGATGCCCCAGCGCCTTGCCACACTTGT
CTTCAAGATGAAGACAACGTTGACCATATCCTCGCCCATTGCGTTTATGCAAGAGAACTTTGGCATTCTTGCTTCCTAGC
GCTAGGTATCAACATTCAAGGCCCATCCACGGATGCAACATTCACTGACTGGTGGCTACTACAACAACGACGGTTCGACG
GGAAGATACGGAGAGGGTTCGACTCCATAGCCATAGAAATTTATTGGGCTCTCTGGAAACAGTGGAACGCAAGAGTGTTC
AACAACATCTCGAGACAAAAAATGACGCCTCAACTCAAGACGATGGAGATACTCGATGATATTGATAATTGGAGGAAGGA
AACACTAGGTGGTGTTAGTGCTTTAGATCCTTTCGTGAAAAAGTAGT-TTCATGTACCTAGGATGTAGGAGTGGGTGTTT
CGGTTACCCTAAGAGATGTTCGCATCATGCTAGGGCTC------------------------------------------
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---------------------------
>chr6B_5
----CCAATACCGCTTATGGGCGTCTGATCGACGGGCCCACCAAGGCTTACAGGATGCCCCAGCGCCTTGCCACACTTGT
CTTCAAGATGAAGACAACATTCACCATATCCTCGCCCACTGCGTTTATGCAAGAGAAGTGTGGCATTCTTGCTTCCTAGC
ACTAGGTATCAACATTCAAGGCCCATCCATGGATGCAACATTCACTGACTGGTGGCTACTACAACAGCGACAGTTCAACG
GGAAGATACGGAGAGGGTTCGACTCCATAGCCATTGAAATTGCTTGGGCTCTCTGGAAACAGTGGAACGCAAGAGTGTTC
AACAACATCTCGAGACAAAAAACGACGCCTCAACTCAAGA---TGGAGATACTCTACGAGATTGATAATTGGAGTAAGGT
AGCACTGGGTGGTGTTGGTGCTTTAGATCCTTTTGTGAGAGAGTAGT-TTCATGTACCTAGGATGTAGGAGCAGGTGTTT
CGGTTACCCTAAGAGATGTTCGCATCATGCTAGTGCTC------------------------------------------
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---------------------------
>chr4B_100
--------------------------------------------------------------------------------
-------------------TTGACCATATCTTGGCCCTCTGCGGTTACGCAAGAGAAGTGTGGCATTCATGCTTTCATGC
GCTGAGAATCAACATCCAAGCTCCATCCACGAAAGTAACATTCATAGACTGGTGGCTACACCAACGATTGTGTTTCAACA
GGAAGATGTGAAGAGGGTTCGACTCCGTAACCATAGAAATTGCTTGGGCTCTTTGGAAAAAACGTAATGCAAGTGTGTTC
AACAACACCTCGAGACATAAAACGGCGCCACAACTCAAGA---CAGAAATACTTGACGAGATTGATGAGTGGAAGAAGGC
AGGTCTGGGCGGCGTTGGTGCTTTAGAGCCTTCCGTGAGATAGTAGTCTTCATGTATCTAGGGTATAGGCGTGGGTGTGT
TGGCTACCCTACGAGATGTTTGCATCC-GTTAAGGCTTTTGTACATAACTTTCTACCTTCTATAAAAATAAGGTACGCCA
TTTGCGAACTCTCGGAAAAAGGAAGAAGAGTGTAGAGGGACGAGGCGTTTCTGCTTCCGGGCTCAGTTGCACCCGGGCTG
GCGAAAAAAATCAAAACAAATACTAAAATATTAATAAAATCCATTTTTTGTGTGGTAGAAATTTAATGCGTGAGGTCTGC
TCCAAATTTCAACTCACTTGGACATCTGAGTAGCCCTCGACAAAAAAGACAAATCGGATTGAAACAATGTGTGAACAGTA
AACTTTTTTACGGACCCCGATTTGTTTTTGTTTTTTTGCCGAGAACTGCTAAAATGTTCAAATGAGTTGAAATTTAAAAC
AGACCTCACACATTAAATTATCTACCTAAAAAGGAGGATTTTTTTGAATTTTTTTAGTATTTATTTTGATTTTGTTTTTG
ACCGGCAACACATGAGTCTGAGCATCGAGTTGGATTTCCGAGTGTAGAGGCT-----GGAACACGACTAGCTGATAGACA
GCGTACAAAAGACCGAAGCGTCCCAAGTGTTCCTACACGGTGGACTTTTGCAGGGGTCGCTCACGA-----ATGGATCAT
TTCACACACTTCGCCGTGTGCGCGAATCACCGTACCCACCACCA-CCCCACTTGGCGAGTCCACTCGATCGCTCGGCAGC
CAAAGCCAGCCCGACACCTGTCCCACCG-CCCCCTCCCGGCTATAAAACCCGGCCACCGGCCAAGCTCCCCGGACAACGC
TGCATAATTGTGTCCGCCGCCGGCTCCCGGGACACCACACAGCGCACAGACAACACAAGTCCTAG---CAC---TCTCGT
TGTCTCGCACCTGCCTGCCGGCTGCGCCGCTCGCGATCGAGCTAGGCCGACGCGCGCGCGAGGGCTTTTGCATGATAAGG
AGGAGGATGGGGGCACTGCACGTCGGCGAGCCGCGGGTCAGCTTCCAGCAGCAGGTCGGCAAGAACGGCGGGGGCCACGG
CGCCGTCGTGGAGGAGATACATGGGCTCATCCGCGTGTACAAGGACGGGCACGTGGAGCGCCTCCCGGCGATCCCCGACG
TGCCCTGCACGTGGGGCTCGACGGCAGCCGCGAGCGGCGTCCTCGCGCGCGACGTGGCGGTCGACCGCGCCACGGGGGTG
TGGGCGCGCCTGTACGCGCCGGCCTCCGCGGCGGGGAAGGTTCCCGTGGTGGTGTACTTCCACGGCGGCGGGTTCAGCGT
CGGCTCCGCCGCGTGGAGCTGCTACCACGAGTTCGTCGCCCAGCTCCCCGCGCGGGCGGGCTGCGCCGTGATGTCCGTCG
ACTACCGCCTCGCGCCGGAGAACCGCCTGCCCGCCGCGTTCGACGACGGGCTCACGGCGCTGCGGTGGCTGCGGCAGCAG
GCGAGCAGAAACA------CCGCCTCCGACGAGGTCTCGTGGTGGCGCAGCCGGTGCAGGTTCGACCGCGTGTTCCTCAT
GGGCGACAGCGCGGGCGCCGCCATCGCGTTCCACGTCGCGGCGCGGGTCGGGCAGGGCCAGCTGGGCGCTCTGGCCCCGC
TCTCGGTCAAGGGGGCCGTACTGATCCAGCCCTTCTTCGGCGGGGAGGCCCGCACGGCGTCGGAGAAGAGCATGCCGCAG
CCGCCAGGGTCGGCGCTGAACCTCTCCACCTCCGACAGCTACTGGCGCATGGCGCTACCGGCCGGGGCCAGCCGCGACCA
CCCCTGGTGCAACCCCTTGGCCCGCGGCGCGCCCCGGCTGGAGACGCTGGCGCTGCCGCCCGTGCTGGTGTGCATCTCCG
AGGCGGACATCCTGCGCGACCGGAACCTGGAGCTGTGCAGGGCGCTGCGCAAGGCCGGCAAGAGCGTGGAGCAGGCGACG
TACGGCGGCGTGGGGCACGCCTTCCAGGTGCTCCACAACTGCCACCTGTCCCAGCCGCGCACGCAGGAGATGCTCGCGCA
CATCCGGGCCTTCGTCGGCGCCAGGTCCAGCTGACAGACACA---CACTCGTCCGCCGTGTCATGTCAGTGTCACCCGTC
GATTATAATTACTTAATCCAGTCTAATCCACTACCAGTTCCAGGCTTTCAGAGTAGATACCGTGTAAGCAGT------AG
TAACTTGTGGTACTCGCCCAAGTGAAGGAAAAGAC---AAGAAAAGGGTCCAATGCCGAACTTGGATTGTTGTAGCTAGT
GCTGTCGGAAAGCAAAAGTGTAGCGGAAAAATAATACTCCTACCACTACCACTACCACTCCATGTATGTACATCGTGTTG
TTCATTGTATC----CTTGCTTACAAAGGCGGATCAATATATATAT------------TACTACTACTGCTTGTGTAGTT
GTGTTGTTTAAATACTAACTCGGCTGATGGTGTTTGCATGATCAAGGAAACCCGAAAAGGCCCCGGGAAC---AAA---T
CATTGTCTGCTTGTCTGGTGCTTTGCACTTTGCACCATCCCTTC----TTTTCTATGTTTCCCGTCGCTGCTTTGGGAAG
GTTCAGGC-----TTGCTTGCTCGATGATGGAGCCCGGGACTTGTCTAAGC---GCAATCATCAGTCGGCTAGTAGATCT
TAGGCTA------GCACCTGGTAAGAACAGAATAGAATCTTGGGTACGTTTCCCGATGGGAGGCCG----TCACATGACC
CCCAACCGTGGCGCAACAACGCAAGTGCGGGTGCGTC--CGGGTGCTAGTGCCGCTGCTGCAATGCATCAGACAGGCC--
--------------------------------------------------------------------------------
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---------------------------
>chr4D_588
GCTCTCAGA-----------------------------------------------------------------------
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-----------------------------------------------------------AACACGACGAGCTGGTAGACA
GGGTGCATACGACCGAAGCGTCCCAAGTGTTCCTACACGGTGGACTTTTGCGGGGGTCGCTCACGAT-----TGGATCAT
TTCACACACTTCGCCGTGTGCGCGAATCACCCACCC-----CCA-CCCCACTTGGCGAGTCCACTCGATCGCTCGGCAGC
CAAAGGCAGCCCGACACCTGTGCCACCG-CCCCCTCCCGGCTATAAAACCCGCCCACCGCCCGAGCTCCCCGGACAACGC
CGCATAATTGTGTCCGCCGCCGGCTCCCGGGACACCGCACAGCGCACAGACAACCCAAGGCCTAGCACCAC---TCTCCT
TGTCTCGCACCTGCCTGCCGGCTGCGCCGCTAGCGATCGAGCTAAGTCGACGCGCGCGCGTGGGCTTTTGCATGATAAGG
AGGAGGATGGGGGCACTGCACGTCGGCGAGCCGCGGGTCAGCTTCCAGCAGCAGGTCGGCAAGAACGGCGGGGGCCACGG
CGCCGTCGTGGAGGAGATACACGGGCTCATCCGCGTGTACAAGGACGGGCACGTGGAGCGCCTCCCGGCGATCCCCGACG
TCCCCTGCACGTGGGGCTCGACGGCCGCCGCGAGCGGCGTCCTCGCGCGCGACGTGGCGGTCGACCGCGCCACGGGGGTG
TGGGCGCGCCTGTACGCGCCGGCCGCCGCGGCGGGGAAGGTCCCCGTGGTGGTGTACTTCCACGGCGGCGGGTTCAGCGT
CGGCTCCGCCGCGTGGAGCTGCTACCACGAGTTCCTCGCCCAGCTCCCCGCGCGGGCGGGCTGCGCCGTGATGTCCGTCG
ACTACCGCCTGGCGCCGGAGAACCGCCTGCCCGCCGCGTTCGACGACGGGCTCACGGCGCTGCGGTGGCTGCGGCAGCAA
GCGAGCAGAAA---CGCGGCCGCCTCCGACGAGGTCTCGTGGTGGCGCAGCCGGTGCAGGTTCGACCGCGTGTTCCTCAT
GGGCGACAGCGCGGGCGCCGCCATCGCGTTCCACGTCGCGGCGCGGGCCGGGCAGGGCCAGCTGGGCGCGCTGGCGCCGC
TCTCGGTCAAGGGAGCCATACTGATCCAGCCCTTCTTCGGCGGGGAGGCCCGCACGGCGTCGGAGAAGAGCATGCCGCAG
CCGCCGGGGTCGGCGCTGAGCCTGTCGACCTCGGACAGCTACTGGCGCATGGCGCTCCCGGCCGGCGCCGGGCGCGACCA
CCCCTGGTGCAACCCGCTGGCCCGCGGCGCCCCCCGGCTGGAGACGCTGGCGCTGCCGCCCGTGCTGGTGTGCATCTCGG
AGGCGGACATCCTGCGCGACCGGAACCTGGAGCTGTGCAGGGCGCTGCGGAAGGCCGGCAAGAGCGTGGAGCAGGCGACG
TACGGCGGCGTGGGGCACGCCTTCCAGGTGCTCCACAACTGCCACCTGTCCCAGCCGCGCACGCAGGAGATGCTCGCGCA
CATCCGGGCCTTCGTCAGCGCCAGGTCCAGCTGACAGACACA---CACTCCTCCGCCGTG-CATGTCAGTGTCACCCGTC
GATTAATTACT------------TAATCTACTACCAGTTCCAG--------AGTAGATGCCGTGTAAGCAGTAGT---AG
TAGCTTGTGGTACTCGCCCAAGTGAAGGAAAAGGC---AAGAAAAGGGTCCAATACCGAACTTGGATCGTTGTAGCTAGT
GCTGTCGGAAAGCAAAAGTGTAGCGGAAAAATAATACTCCTACCACTACTGCTCCATGT--ACGTATGTATATCGTGTTA
TTCATTGTA------CTTGCTTGCAAAGGAGGATCAATATATATATATATA----TATTATTACTACTGC--------TT
GTGTTGTTTAAGTAACAACTCGGGTGATGGTGTT-GCATGATCAGGGGAGCCAGAAAAGGCTCCGGGAAC---AAAAAAT
CATTGTCTGCTTGTCTGGTGCTTTGCACTTTGCACCATCCCTTC----TTTTCTATGTTTCCCGTCGCTGCTTTGGGAAG
GTTCAGGTT----TTGCTTGCTTGATGATGGAGCCCGGGACTTGTCTAAGC---GCAATCATCAGTCGGC---TAGATCT
TAGGCTA------GCACCTGGTAAGAACAGAATAGAATCTTGGGTACGTTTCCCGATGGGAGGCCA----TCACATGACC
CCCAACCGTGGCGCAACAACGCAAGTGCGGGTGCGTCCACGGGCGCTAGTGCCGCTGCTGCAATGCATCAGACAGGCCGA
CCGGTCGATCGCTGGACGGACGCATCATTCTTCCTGCACGGTCTGCTTGCCTCGAGTGCTTATGCAGCTTGTAAATTGGA
AGGCACGCAGGGTTGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTTGTTGTTGTACATAGTATCATTGCTTGGTTGCCT
GTCTCGCCAACCGCATCATGGCGGCTGGCATCTACGTAATTGCGTGCAAGCAGGCCAACATCATGCGTGATCATCTGAAA
AGAGCCTCGATCGGCCGCATTGGGAAGTCCAGCCACAATGCACATGATAAGTC--------GTTGCTTGGTCGCCTGTGA
AATGATATACTGAGACCATGCATATGT
>SNPs
S-SS---------SS-S----S--S----S-SS-S--S-SS----------SS--------SS--------S-------S
--S-----------S--S--------------------------------------------------S-----------
------------------------S-----------------------S-------------------------------
----------------S-------S-----------------------------S----S--------S-----------
-----------------S-----S-S-------------------S----------------------S-----------
S------S------------S----------S---------------------------------S-S--S-----S---
--------------------------------------S-----------S---S-S----S--------S-S----S--
--SSSSS-----S-S-----SS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------SSSSS--------------S--------
------------------------------------------------------------------SSSSS---------
--------------------------------------------S--------S--------------------------
----------------------------S---------------------------------------------------
------------------------------------S----------------------------------SSS------
-----S--S------S------S-----------------S-S------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-----------------------------------------------------S--------------------------
---------S----------------------------------------------------------------------
-------------------------S--------S--S------------------------------------------
---S---------S---S--------------------S---------S----------------------------S--
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--SS----------------------------------------------------------S-----------------
-------------------------------------------S-S------------S---------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------S--S-SSS---------------S-----------------S-
-------------------------------------------------------------------------S-SSS--
-----------------------------------SSS------------------------------------------
-S-------------------S---S--------S---SS-----------------------------S----------
---------SSSSSS---S--------------------------------SSSS-------------------------
--S------------------------S--------------S--------S------------------SSS-------
------------------S-------S--------S-S---S-SSSSS--------------------------------
---------SSSS--------------------------------------SSS-----------S------------S-
------SSSSSSS---------------------------S--S----------------------SSSS--------S-
--------SS-------S--S--------------S-----------------------------SSS--S----S-SSS
--S-------S---S-S---S--S--SSSSS-SSSSSSS----------------------S---S---------S----
----------S-S-S-S----------------------------------------S-S--------------------
-----S------S------------S----SSS-SSS-----------------------------------------S-
----S-----S----S-------------S-------------------SS-SSSSSSSSS--------------S-S-S
-------S-------------------
>forward_80
------------------------------------------------------------CTTCGCCTTGCTACACTTGC
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>reverse_2088
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-------GAAGGGGGCCGTACTGATC------------------------------------------------------
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---------------------------
>forward_83
---------------------------------------------------------------CGCCTTGCTACACTTGC
CTA-----------------------------------------------------------------------------
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>reverse_2478
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------CCA
CATCCGGGCCTTCGT-----------------------------------------------------------------
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---------------------------
>forward_366
--------------------------------------------------------------------------------
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--------------------------AGTGCCACAACTCAAGACGA----------------------------------
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>reverse_2678
--------------------------------------------------------------------------------
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-------------------------------------GAAGAAAAGGGTCCAATGCCG----------------------
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---------------------------
