>input_sequence_61243
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-------------------------------ATGTATGATAACTACAGAAATCCTCATCCTCCCGGGATGCAGATGCCCC
CACCAAACCCTCAGCCTGGTCCCTATGACAACCCATTGTATGGCGCAAGCTCGGGTCTGATTAAAACTGGGTTAGGAGTA
TATGGGGAGAAGTTCTTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGAGCCTCCAAAGAACCTTGATCCCCC-
TGG-----------------------TGTTTCAAATCATTCACGTACTATCTCTAAATTA-TTTATTGGCTCTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ACTGTTCCCGTTCCTTCACAGGGTATGTTT----GTATTTCCCATCTACACTGGATATGTATTGGGTTCGTCTGTCTATA
TATCTGGTGTACTGAAATC-AAATG-------------------------------------------------------
-----------GTTGCAATGGCATTTCAGGGGCACTGGACTCGGATAAGTGAGCCTGTTGGTGGCCGTTTGTCATACAAA
CCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTCGGTACCTTCATTATTCTCGCAGGCTT
CACACTAGGCTTCATGGGGAAGTGAGTTTTC---------TTCTTACCTT-CTCCAGCCACGCGAAACAGTGACACTTCA
AACCTGGGGTTCCTAACGCACTTGATATCGATATGCAGGTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGGCT
GATCGGATGGGGCCTACAGATTGTCTTCTTAAAAGGCCTCCTCTACTCGATGGGCGGTGGCGAGGTGCCGCTGCTCGACC
TGGTAGCCTACAGCGGG-TACCTGTTTGCGGGGCTCTCCCTGGCCATCGTCGCCCGGCTCCTGTGGGCCTACTCATACTA
CGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCCTGGTGAGGACGATGAAGCGGGTCATCTTCACGGAGATGC
GGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGG
CTCGGCAGCATAGGCGCATGA-----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr2B_1_TraesCS2B01G022800
TGCCCCCTCCCTGTTACCTACCTCGTCGATCGATCGGCGTACCTTTGTTGCACGAC---------------------GCG
ATTGGATTGGATTGGATTCGATTGGATTTCGGGTATTTCTTTCCTTGTTAGTTTCGGTCCACGATTCTTTCTTTTCTTTG
TTCCCCCTCCCTCTGCTTAACCA---------GTATTATTATTATTATTACTATTACTATTAGTGCCTCTGCCTGTCTTG
TTAGGTTAGGTTAGGTTAGGTTGGATCCAATCTGCTGCACACTTTATTAGAGCACATACAGATTTTGCCTCTTCTTCTTC
TCTTCTCTTCTCTTCTCTTCTAGCCGATTTCCTTTCCTACTGCCTCCATGGATCACAGGT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGACTAGAGGATAATCTTCTTGCCCCTC-----TTGTTTCATGGCAGTTACTG
ACTGAGGTGCTTGCAGAATTACATAGATATTCAG---ACTTGTACCATGTGCATGTATGTATGTATGTATGTATGTAT--
----------------------------------------------------------------------------GTAT
TTAGCAGCAGACGC----AAAGAAAGAAAACAACATAATGCTAGCTAGGCTAGGTGTAC------TACTATAACTGGCAT
CTAGGAATGATGGTTCTCAGCTTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCTCG----TCTTTACTCATACA
CATCAATAA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GCAGATATTATACCAGATGTTCTGTACAATTTCTCTGTCATCTTTAGAAATTTTCACTTGTTTACAC
TACATATGGTACAACAATTAAGATGCTATGTTGATCTCTTGTGTGATGTGTTCTGTTGAAAATTTCTAGGAATTATTTGA
ATGGCATGACTAGTAGTGCTTAAGTAGTCGAAATTACTACCCTGCCTGCAAGTAT------CCAAGATAAACTCTGTTCC
CCCTTGTCTCATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGTTATGCTTTAATTTA--ATAATAATGC
TGTCTTGACATTTTACTTCAGT-----------------------------------------TCAATTGGCATTGCATT
TATTTTTAACTCTGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCTCATCCTCCCGGGATGCAGATGCCCC
CACCAAACCCTCAGCCTGGTCCCTATGACAACCCATTGTATGGCGCAAGCTCGGGTCTGATTAAAACTGGGTTAGGAGTA
TATGGGGAGAAGTTCTTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGAGCCTCCAAAGAACCTTGATCCCCC-
TGG-----------------------TGTTTCAAATCATTCACGTACTATCTCTAAATTA-TTTATTGGCTCTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ACTGTTCCCGTTCCTTCACAGGGTATGTTT----GTATTTCCCATCTACACTGGATATGTATTGGGTTCGTCTGTCTATA
TATCTGGTGTACTGAAATC-AAATG-------------------------------------------------------
-----------GTTGCAATGGCATTTCAGGGGCACTGGACTCGGATAAGTGAGCCTGTTGGTGGCCGTTTGTCATACAAA
CCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTCGGTACCTTCATTATTCTCGCAGGCTT
CACACTAGGCTTCATGGGGAAGTGAGTTTTC---------TTCTTACCTT-CTCCAGCCACGCGAAACAGTGACACTTCA
AACCTGGGGTTCCTAACGCACTTGATATCGATATGCAGGTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGGCT
GATCGGATGGGGCCTACAGATTGTCTTCTTAAAAGGCCTCCTCTACTCGATGGGCGGTGGCGAGGTGCCGCTGCTCGACC
TGGTAGCCTACAGCGGG-TACCTGTTTGCGGGGCTCTCCCTGGCCATCGTCGCCCGGCTCCTGTGGGCCTACTCATACTA
CGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCCTGGTGAGGACGATGAAGCGGGTCATCTTCACGGAGATGC
GGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGG
CTCGGCAGCATAGGCGCATGAGATAGTCTTGTC------------------TGTAATCTTGGCACTAGAA----AAAAAG
CAGCCACCTGTGAAGCTTAGGCGCATTCAGTATAGCACATCCAGTAGCTTGTGCAGGCTCTCTGAGCATCATCACATATG
TTTTGTTGACAGGG-TTTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCAGTTGGGCACCATC-TGTAGGATGTTT
GTTGGAATAGTCTCAAGTATATTTATATTTATACTTATTGTTTATGT----TATATATGTTTCTTTGTATGTTGTTGGAT
CTACCCTAGTTCACTCATCCTACTTAACTGGCATTGTTTGAATGTTCATTCAGTGAAAGTATATGGATTTTCGATGATAA
AGACAGTCAGCTCG-------------------------------TATATACTGTCAGAAAATTCACCACAGAAGTATGC
ATATTATTTCTGTTATTATTACATAGTATCTG-ATTTTTTGAACCTAAAAAGAGATTTGGCCTAACAGTTTTTCTCAAAA
CAAGACAAACAAATATGTATTTTGCTTAT-AACTGATTTTCTTTGGATTTTTGGTGAAGTATCCAGATTTACGCGTGATA
ACTATCCGTGCAGAAAAAACGAGACA-CTG-GCAATGTATGAAATGCATTAGCAACAAGTGAACAAGTGCAAAAGCAAAA
TAGGAAACC------------------------------CAGCTTTGTTGAGAACACAAAAGCAAAATAGGTTCCCAGCT
GAATTCATTCACAAGCACGGCAACAAACACGGTTATCATGAATTTCACATCATGCAGTTGCACATTCCAACAGCCATTCG
TCATCAAAATGTAGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAAAC----------------------------
-------AGTGCAAAGGTACGACGACTATGGGTACAAGAGCAATAAGAAACTTTGGCATCTCACAAGCCTGGCAACAAGA
AAATACCCTGTCAAACTTGAT--ATTATTACAACTAGAGACCCCTTTCGTCATTGTCACGAATCATATTGGCATGGCCA-
--TCTTCTTCTTGGTTATAATGACTTCCAGGGCG
>chr2A_1
TGCCCCCTCCCTGTTACCTACCTCGTCGATCTATCGGCGTGGCTCTTCTTGTTGAGTGTTGCAGGACGGACGAGCCAGCG
ATTGGATTGGATTGGATTGGATTGGATTTTGGGTACCTTTTTTTTTCCTTA--TCGATCCACGATTCTTTGTTCCCTTTC
TGGTTAACGAGTTAGTATGTAGTACTATGTACGTATTATTAGCGAGCGC---------------------------CTTG
TTAGGTTGGATC-----------GATCCAATCTGCTGCACACAACCA-AGAGCACATACAGATTTTGCCTCTTCTTCTTC
TGCTCTGC-----TCTGTTCTAGCCGATTTCCTCCTTCTTGTTAGGTAGATGCACAGAGCAGATTATTAGTATGTATGTG
CTCCCACACCACAAGATTCCTTCCTTCCTTCCTTGTTCTACACCATACCATGTTTTTCTTTTTTCCCAGTCCAGTTGATT
GTATTTGTATGCCTCCCTCATCTTGACATAATAATATGCTTGCTTGGTTTATTATTATTATTATTATTATTATTATTGCT
CCTGCTTATTATTCTTGCCCGTAAAGACGGATGTTAGTGTACTACTACTAGTCAAAACTTGAGATAATACTATATGGTTG
GATGCACTCACTTGTCCTTAACAAGTCAGACTAGAGGATAATGTTCTTGCCCCTCCCTACTTGTTTCATGACACTTACTC
AC---GGTGCTTGCAGAATTAGATAGATATTCACAATACTTGTACCATGTGTATGTATGTATGTATGTATGTATGTACTC
CGTCTCATAATGTAAGACTTTTTTTGACTCTAGTGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTAGTAT
TTAGCAGCAGATGCAAAGAAAGAAAGAAAACAACATAATGCTAGCTAGGCTAGGCTAGGTGTACTTACTCAAACTCACAT
CTAGGAATGATGGTTCTGAGCTTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCACGTCTTTCTTTACTCATATA
CATACATACAGTCAATAACCGGAAAACAGTTAGCTAATCCTCCTCTGTCGCTAAACAAACAGTTAGCTAATCCTCCTCTG
TCGCTAAACAAACAGTTA-----------------GCCATAGAGGATCATAATGGTATATCTTTGTGTACTATCGCTAAA
CAAACAGTTCTTCAAGGTGCAAGTTTCTGCAGATATTTCACATTTATCATGGGCAGACTTCAT-AATTATATGAATATAT
AGCAGTATGGGTGGCAGATATTATACCACATGCTCTGTACAATTTCGCTGTCATCTTTAGAAATTTTCACTTGTTTACAC
TACATATGGTAGAACAATTGAGATGCTATATTGATCTGTTGTGCGATGTGTTCTGTTGAAAATTTCTAGGAATTATTTGA
ATGGCATGACTA---GTGCTTAAGTAATTGAAATTACTACCCTGCCTGGAAGTATCCAAGACCAAGATAAACTCTGTTCC
CCCTTGTCTTATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGTTATCCTTTAATTTAATATAATAATGC
CGTGTTGACATTTTACTTCAGTTAATTTTCTACGGCCACCGTGCATATGTCAATATCCATTTATCAATTCGCATTGGATT
TATTAT-AACTCTGCTTCCTTCTATGCAGCCATGTATGATAACTACAGAAATCCCCATCCTCCCGGGATGCAGATGCCCC
CACCAAACCCTCAGCCTGGCCCATATGACAATCCATTATATGGCGCAAGCTCAGGCCTGATTAAAACTGGGTTAGGAGTA
TATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGAGCCTCCAAAGAACATTGATCTCCC-
TGG-----------------------TGTTTCAAATCGCTTATGTATTCTCTCTAAATTA-TTTATTGGCTCTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ACTGTTCCCGTTCCTTCACAGGGTATATTT----GTCTTTCCCATCTACACTGGATATGTATCTTGTTCTTCTGTCTATA
TATCGGGTGTACTGAAATATGTTCCGTCTTTCCTAGCTGCGCTGGATATGTTTCTGGTTCTTTTATCTATCTGGTGTACT
GAAATAGATTTTTTGCAATGATTTTTCAGGGGCACTGGACCCGGATAAGTGAGCCTGTTGGTGGCCGGTTGTCATACAAA
CCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGGTACCTTCATTATTCTTGCAGGCTT
CACACTGGGCTTCATGGGAAAGTGCGTTTTT---------TTTTTAACTTTCTTCAGCCA--AAAAACAGTGACACTTCA
AAATCACAGTTCCTAATGCACTTGAACCC-GTATGCAGGTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGGCT
GATCGGATGGGGCCTACAGATCGTGTTCCTGAAAGGGCTCCTCTACTCGATGGGCGGTGGCGAGGTGCCGCTGCTCGACC
TGGTAGCCTACAGCGGG-TACCTGTTCGCAGGGCTCTCCCTGGCCATCGTCGCTCGGCTCCTATGGGCCTACTCATACTA
CGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATTTTTTTGGTGAGGACGATGAAGCGGGTGATCTTCACGGAGATGC
GGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGG
CTCGGCAGCATAGGCGCATGAGATAGTCTTCTC------------------TGTAAATTTGGCACTAGAAAAAGCAA---
---CCACCTGTGAAGCTTAG--------------GCACATCCAGTAGCTTGTGCAGGCTCTCTGAGCATCATCATATATG
TTTTGTTGACAGGGGTTTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCAGTCGGTCACCATTTTGTAGTATGTTT
GTTGGAATGGTCTCAAGTATATTCATATAC------ATTGTTTATGT----TATATATGTTTCTTTGTATGCTGTTGGAT
CTACCCTAGTTCACTCATCCTACTTAACTGGCATTGTTTGAATGTTCACTCAGTGAAAGTATATGC--------------
-------CAGCTTCAGTCTGTCATTTGGTAGGTGCAGAGTATATATATATACTGTCAGAAAATTCACCACATAAGTATGC
ATATTATTTCTGTTATT---CCATTGTATCTGGATTTTTTGATTTC-CTCAGAGTTTTGGTCCAACAGCTTTTCTCAAAA
CAAGACAAACAAAATTGTATTTTGTTTATAAACTGATTTTCTTTGGATTTTTGGTGAGGTATCCAGATTTACGCGTGATA
ACTATCCGTGCAGAAAAAAAATGAGATGCGTGCAATGTATGAAATGAATTAGCAACAAGTGAACAAGTACTTAACAACGT
--------TTAATGGATAAATTCTGAACGACCAAAAACAGAGCTTTGGAGGGAACACAAAAGCAAAATAGGTTCCCAG--
-AATTCATTCTCAAGCACGACAACAAACGCTGTTGTCATGGATTTCACAGCATGCAGTTGCACATTCCAACAACCATTCG
TCAAAAATG---AGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAAACAGTGCAAAGGTCCGATGCAAAAAAAAAA
AAAAAACAGTGCAAAGGTACGACGACTATGGGTACAAGAGCAAGAAGAAACTTTGGCATCTCAGAAGCCTGGCAACAAGC
AAATACCCTGTCAAACTTAATATATTATTACAACTAGAGATCCCTTTCGTCATTGTCACGAATCATATTGGCATGGCCA-
--TC---TTCTTGGTTATAATGACTTCCAGGGCG
>chr2D_474
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GTAT
TTAGCAGCAGACGC----AAAGAAAGAAAACAACATAATGCTAGCTAAGCTAGGTGTAC------TACTCCAACTGACAT
CTATGAATGATGGTTCTGAACCTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCACG----TCTTTACTCATATA
CATACATACAATCAATAAGCGGAAAATGGTTAGCTAATCCTCCTCTGCCAGTAGCTTGCTTCCCTACTCCCAGCGAGTCG
TGTCGCTCTTGTACTGGTGGAGTTCTCTTCTTCTTGCCATAGAGGATAAAATCTT----------TCTACCATCACTAAA
CAAACAATTCAG---GGTGCAAGTTTCTGCAGATATTTCACATTTATCATGGGCAGACTTCATAAATGATATGAATATAT
AGCAGTATGA----CAGATATTATACCAGATGTTCTGTACAATTTCTCTGTCATATTTAGAAATTTTCACTTGTTTACAC
TACATATGGTAGAACAATTAAGATGCTATATTGATCTCTTGTGTGATGTGTTCTGTTGAAAA------------------
----------------TGCTTAAGTAATCGAAATTACTACCCTGCCTAGAAGTAT------CCAAGATAAACTCTGTTCC
CCCTTGTCTCATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGC----------TTTAATTTAATAATGC
TGTGTTGACATTTTACTTCAGTTAATTTTCTACGGCCACCGTGCATATGTCAGTATCCATTTATCAATTGGCATTGCATT
TATTTT-AACTCCGGTACCTT-TTTGCAGCCATGTATGATAACTACAGAAATCCTCATCCTCCCGGGATGCAGATGCCCC
CACCAAACCCTCAGCCTGGCCCTTACGACAATCCATTGTATGGTGCCAGCTCGGGTCTGATTAAAACTGGGTTAGGAGTA
TACGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGAGCGTCCAAAGAACCTTGATCCCCC-
GGG-----------------------TGTTTCAAATCGCTCACATATTCTCTCTAAATTA-T-TATTGGCTGTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ACTGTTCCCGTTCCTTCACAGGGTATGTTT----GTCTTTCCCATCTACACTGGATATGTATCGGGTTCTTC--------
TATCTGGTTTACTGAAATG-AAGTC-------------------------------------------------------
-----------TTTGCAATGGCATTTCAGGGGCACTGGACTCGGATAAGTGAGCCTGTGGGTGGCCGGCTGTCGTACAAA
CCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTCGGCACCTTCATTATTCTAGCAGGCTT
CACACTAGGCTTCATGGGGAAGTGAGTTTTC---------TTCTTACTTT-CTCCAGCCACGCAAAACAGTGACACTTCA
AACCTGGGGTTCCTAATGCACTTGATATCGATATGCAGGTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGGCT
GATTGGATGGGGCCTACAGATCGTGTTCCTAAAAGGGCTGCTCTACTCGATGGGCGGAGGCGAGGTGCCGCTGCTCGACC
TGGTGGCCTACAGCGGG-TACCTGTTCGCGGGGCTCTCCCTGGCCATCGTCGCCCGGCTCCTATGGGCCTACTCATACTA
TGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCTTGGTGAGGACGATGAAGCGGGTCATCTTCACGGAGATGC
GGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGG
CTCGGCAGCATAGGCGCATGAGATAGTCTTGTC------------------TGTAATCTTGGCACTAGAAAAAGAAAAAG
CAGCAACCTGTGAAGCTTAGGCGCATTCAGTATAGCACATCCAGTAGCTTGTGCAGGCTCTCTGAGCATCATCATACATG
TTTTGTTGACAGGG--TTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCAGTTGGTCACCATTTTGTAGTATGTTT
GTTGGAATAGTCTCAAGTATATTTAT-----TATTTATTATTTATGTTACATATATATGTTTCTTTGTATGTG-------
-----------CACTCATCCTACTTAACTGGCATTGTTTGAATGTTCGGTCAGTGAAAGTATATGGATTTTCGACGATAA
AGACAGTCAGCTCCAGTCTGTCATTTGGTAGATGCAGAGTATA--TATATACTGTCAGAAAATTCACCACAGAAGTATGC
ATATTATTTCTGTCATTATTCCATTGTATCTG-ATTTTTTGAATCT-AAAAGAGATTTGGTCTAACAGTTTTTCCCGAAA
CAAGACAAACAAATACGTATTTTGTTTATAA-CTGATTTTCTCAGGATTTTTGGTCAAGTATCCAGATTTACGCGTGATA
ACTATCCATGCAGAAAAAAATGAGACGCTG-GCTATGTATGAAATGCATTAGCAACAAGTGAACAAAGTGGTTAACAAAA
GATTTATGTTGATGGATAAATTCTAAACGACCAAAAACACAGCTTTGGAGGGGACACAAAAGCAAAATAGATTCCCAGGT
ACCAATTCTCAAG-----------------------CATGGATTTCACCGCACGCAGTTGCGCATTCCAACAGCCATTCG
TCATCAAAATGTAGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAAAC----------------------------
-------AGTGCAAAGGTACAACGACTATGGGTACAAGAGCAAGAAGAAACTTTGGCATCTCACAAGCCTGGCAACAAGC
AAATACCCTGTCAAACTTAATATATTATTACAACTAGAGACCCCTTTCGTCATTGTCACGAATCATACTGGCATGGCCAT
CTTC---TTCTTGGTTATAATGACTTCCAGGGCG
>chr2D_954
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---------------------------------------------------------------TCAATTGACACATCAAT
TATCTTTACCTCCGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCTCATCCTCCTGGGATGCAGATCCCCC
CACCAAATCCACAGCCTGGCCCATACGACAATCCATTGTACGGCGCAAGCTCAGGTCTGATTAAGACTGGGTTAGGAGTG
TATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAGTTCATGCAGAGCAATGTAAGGAGCCTCCAAAGAACCTCGACCCCCCA
GGG-----------------------TGTTTCGTATCTCTCACAAACTATCTCTAAATTA-TTTATTGGCTGTACTCTTG
CAGATCAGTAGATATTTCTCCAATCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ACTGTTCCCGTTCCTTCATAGGGTATGTTTCGTTGTCTCTCCCATCTACGCTGGATATAGTTCTGGTTCTTCTATCTA--
--TCTGGTGTACTAAGGTAAAAATA-------------------------------------------------------
-----------TTTGCATTGCCTTCTCAGGGGCACTGGACTCGGATAAGTGAACCTGTGGGTGGCCGGTTGTCGTACAAA
CCTCCAATGTATGATATAAATGCGCCAGATTTGTACATCCCTTTCATGGCGTTTGGTAGCTTCATTATCCTCGCGGGCTT
CACATTAGGCTTCATGGGAAAGTGAGTTTTCCCTTCTTCCTTTTTAACTTTCATC---CA--CAAAACAGTGAGACATCA
AACCCAGCGTTCCTAAAGCACTAGGTATCC--ATGCAGGTTCACTCCAGAAGCTATCAATCTCCAGTTCACAAGAGGACT
AATCGGATGGGGCCTATAGATCGTGTTCCTGAAGGGGCTCCTCTACTCAATGGGCGGGGGCGAGGTGCCGCTGCTTTACC
TGGTTGCCTACAGCGGGGTATCTGTTCGCTGGGCTATCCCTGGCCATCGTCGCCCGGCTCCTATGGTCCTACTCGTACTA
CGTGATGATGCCGTGGATGAGCATGTGCATGGGGATCTTCCTGGTGAGGACGATGAAGCGGGTGATCTTCACAGAGATGC
GGGGCAGCGAGAGGCACTCGACGCGTCAGCACTACTTCCTGCTCTTCATGGCCATCGTGCAGTTCCCCCTCTTCTTCTGG
CTCGGTAGCATAGGCGCATGAGATGGATAGTCTTCTCTCTGGTGTTCCCCTTGTAATTTTGCCACCAGAG----GAAAGT
T----ACCTGTGAAGCTTAGTTGCGTT--------------CAGTAGCTTGTGCAGGCTCTCTGAGCA-CATCACATATG
TTATATTGACAGGG--TTTTGTGCTTGGTTTTGTA--AATTTGTGAATTTTGCCATTAGTCACTCTCTTGTAGGATATTT
G-TTGAATAATCGCAAGTATATACAT-----TATTACTTTTGTTATAT--------------------------------
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----------------------------------
>chr5A_954
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---------------------------------------------------------------TCAATTGGCATTGCATT
TATTTT-AACTCCGCTT-TTTCTTTGCAGCCATGTATGATAACTACAGAAATCCTCATCCTCCTGGGATGTAGATACCCC
CACCAAACCCTCAGCCTGGTCCCTATGACAATCCATTGTATGGTGCTAGCTCTGGCCTGATTAAAACTGGGTTAGGAGTA
TATGGGGAGAAGTTCCCCGGCTCCAGTTCAGAATTCATGCACAGCAATGTAAGGAGCCTCCAAAGAACCTTGATCCCCCC
TTGGTGTTTCAAATCACTCACATATTTGTTTCAAAACGCTCACATATCCTCTCTAAAATATT-TATTGGTTGTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCATAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
ATTGTTTCCGTTCCTTCACACGGTATATCA-----TATTTCCCAGCTGCAATGGATATGTTTTTGGTTCTTCTATCTATA
TATCTGGTGTACTGAAATG-AAATA-------------------------------------------------------
-----------GTTGCAATGCCTTTTCAGGGGCACTGGACTCGGATAAGTTAGCTTGTGGGTGGCCGGCTGTCCTACAAA
CCTCCGATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGGTACCTTCATTATTATTGCAGGTTT
CACACTGGGCTTCATGGGAAAGTGAGTTTTTTTAA----------ACTTT-CTTCAGCCA--CAAAACAGCGTCACTTCA
AAATCACAGTTCCTAATGCACTCGAACCC-ATATGCAGTTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGACT
GATCAGATGGGGCCTACAAAT-----------------------------------------------------------
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----------------------------------
>chr3D_954
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCAATTGGCATTGCATT
TATTTT-AACTCCGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCTCATCCTCCTGGGATGCAGATACCCC
CACCAAACCCTCAGCCTGGTCCCTATGACAATCCATTGTATGGTGCTAGCTTGGGCCTGATTAAAACTGGGTTAGGAGTA
TATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCACAACAATGTAAGGAGCCTCCAAAGAACCTTGACCCCCCC
CTGGTGTTTCAAGTCACTCACATATTTGTTTCATAACGCTCATATATTCTCTCTAAATTATT-TATTGGTTGTACTCTTG
CAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTATGTCAGGAACAAGTTGAAAGTCAT
AATGTTTCCGTTCCTTCACAGCATATATCT-----TCTTTCCTAGCTGCACTAGATGTGT--------------------
-------TGTACTGAAATG-AAATG-------------------------------------------------------
-----------GTTGCAATGCCTTTTCAGGGGCACTGGACTCGGATAAGTGAGCCTATGGGTGGCCGGCTGTCCTACAAA
CCTCCGATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGGTACCTTCATTATTATTGCAGGCTT
CACACTGGGCTTCATGGGAAATGAGTTTTTCTTAA----------ACTTT-ATTCAGCCA--CAAAACAACGTCACTTC-
AAATCATAGTTCCTAATGCACTCGAACCC-ATATGCAGGTTCACTCCAGAAGCCATAAACCTTCAGTTCACAAGAGGATT
GATCGGATGGGGCCTACAAATCGTCGCCTTGAAGACGGCCT---------------------------------------
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----------------------------------
>SNPs
-------------------------------S--------SS--S-SS-SSSS--S------------------------
------------------S----------S-----SS-S---SS--SS-SSSS---S-------------S--SS----S
-SSSSSSSSSS-SS-SS-SSSSS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------S-S-SSSSSSSSSSSS-------------------SSSSSS--------------------------------
-SS---SSSSSSS---S----------------SSSSSSSSSSSSSS-SSSSSSSSSS-S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S---------------------------S--S-----S
--SSS----------------S-----------S-----------------S-------------------------S--
--------------------------------------------------------------------------------
---------------------------------------------------------------------SS-----S---
-----------------S-----------------------------------------S------------------S-
---SS---S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------S--------------------------------------------------
------------SSS-----------S---------------------S-------------------------------
---------------------------------------------------------S----------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
---------------S----------------------------------------------------------------
-------------------------------------SS-----------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------S-------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------S---------------------------------------------------------------
---------------------S--------------S-------------------------------------------
--------------------------S-----------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------------------------SSS--S----------------------------------------------
------------------------------------------------S-------------------------S-----
-------------S------------------------------------------------------------------
--------------------S---S------------------S--S-------------S-------------------
------------------------S-------------------------------------------------------
-------------------SSS--S-------------------------------------------S-SS--S-----
S-SSS-SSS--------------------------------------SS-S---------------------------S-
S------------------S--------S-S---S-----S--------S------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------------------------S
------------------S-------------------------------------------------------------
----SSS---------------------------
>forward_51
-------------------------------GATCGGCGTACCTTTGTTGC-----------------------------
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>reverse_2597
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------------------------------------CCTCCTCTACTCGATGGGCG------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTCCCCCTCCCTCTGCTTAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_2703
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTGGGCCTACTCATACTA
CGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_2582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TCGGATGGGGCCTACAGATT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_3608
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCAGCTTTGTTGAGAACACA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
