>input_sequence_61238
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--------------------------------------------ATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTAGCC
GGGATCGCCGACAGGATAACCGAGCATGTGGACCTCGCGCGCTTCCGCTCGGTTTGCCCATCTTGGCGCTCGGCCTCGGT
GGAGCACGCCGCCCGCCGCCGCGTGCCCCTGCTTCTCCTGCCCTCCCAGCAGAACTCCCGCGTCAACCGCAGTCTCTGGT
CCCTCGCCGACGACAGCATCACGGAGATCCCGATGCCCGCAGCGTGCGGCCGCTCCTTCCTCTTCGCCTCGCCGCGCGGC
TGGACGCTCGCCGTGGCCGACGACTTCTCGGCCACGCTGCTGCACCCCTTCACGGGCGCGTCGGAGAGCCTGCCCGCGTT
GCCGCCATCCTTCCACGACGGGTATCAGATGATCCTCCGTGACATGGTCTGGGACCGGTCGCCTGACGCCGTCATGGTCT
CGCAGGGCAAGGGCGCGTTCTTCTGCCGGCTGCAGGGCGACGGCAGGTCGTGGACCCCCGCCGACCTCTCGCCGCCAGCT
CGCGTCGGCAGCATCACCTACTGCGACGGCGCGTTCTACCTCCTTGACAAGCGCGCCAACAAGGTGACGGCCGTGGACGG
CGCGACCTTCGCCGTGGCCGCCGCGATCGAGCCGCCAGATCTGGCGATGCCCGACCGCTCGTGGG---CACGCGAGTCCA
CGCTCGTCGTGTCGTCCGCCTCCGAGCTCCTCCTCGTGGTGCACGGAGGATGCC------------------ACCGCTCG
AAGGGCCTCTTCAAGGCCTTTCACGCGGACCGCGGGAGCCTGGTGGCCGGGTGGTCGGAGGTCGCCGGCGGCGGCCTCGG
CGACCGCGCCGTGTTCGTGGACCACGCCCGCGGCTTCTGCGTGGAGGCGAACGGGGTCAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCGCGCACGAGGAGGCCAACGCCAACGCCAACTCCGGGTGGGGCGACTGGGGGAGGTACACCGTCTCC
ATGCTCGACCTCGACGGCCTCACCACCCAGAATCTCTCCCACGGCAACCTCTTGAAATGCCTGCACGGTAGGCAGCGCCC
TTCCTGGTCGATGCCAAATCTGCATTGA----------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>chr1B_1_TraesCS1B01G296100
TAACGGGCCTCAGCTCATTGAGATAATGAGTCACCCAACACAGAGGTTGGTGATAAATTTTCAGCCCAAAACAAGTCACT
ACACAACAGGAAAAAAAACATGAATCTTGGAGCAACAATCTCTGTGTTAGTGACAAATTTTCAGCTCAGGAAAAAAAAAC
ATGAATCTTGAAGCAGCAATCAATAGGCTGAAAAATCTGAATTTAATTTTCCAGCAACTTACATAGTGGCAGAGTTTGAC
CAAACTCTTTGGGGAGTACTCCCTCAGTCTTTAAAAGAGTGTACTGTCAACTTTGTAAAAGGTCGAACTTTTTTATGTAT
GACCGTATTTATATAATAATAGCCAACATCTATGCCATCAAATAGTAGCATTCTCTGCAAAAATAAAATAAAATAAAATA
ATAGCATTAGATTTATGATGAAAATTCATCATATACCTATTTGGTTTTATAAGCATTGACATATTTTTGCACAAACTTGA
TCAAACCTTAAGATAGTTTGACTGTCTAACAAAGTTGGAAATACACTATTTTAAAGACCGTGCGTGTATAAGCTTGTGCT
GCGGGCGGACCTAAAATTTGATCACCTAAGCCCTCTCTCTAAAAATATTATCCTACAAATTTTCTCCGCCATCGGAAAGT
AGAGAAACCCAATGATTTTATTTAAAAAAACACACCCAATGATTTGCATGTCTTTCTAGGCACGAATTCCGACGCTTGAA
AAAAAAAAGAGGTGAGTCTATGCACGGTAGATATTTGTATGAGCGGTCAATATAATAAAGCTCGTGGGCCTCGTGGTTTA
GCTTAAGAATAAACAAAGCAAAGAGAAAGAGGATCAGGGAGCAA-TCTTCCTCACGACCTCGATCTAGAAGCACTCCACG
CTCCACAGTACTCTGTCTCTACTCCACACGAGCAAAAGTCAACCAAAGCTCATAGCTCCGTTTCCATCGCATTCTTCTTC
CATCCCTCCATCAATCCAAGAACCTA---GCAGACGCCATCAGCATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTAGCC
GGGATCGCCGACAGGATAACCGAGCATGTGGACCTCGCGCGCTTCCGCTCGGTTTGCCCATCTTGGCGCTCGGCCTCGGT
GGAGCACGCCGCCCGCCGCCGCGTGCCCCTGCTTCTCCTGCCCTCCCAGCAGAACTCCCGCGTCAACCGCAGTCTCTGGT
CCCTCGCCGACGACAGCATCACGGAGATCCCGATGCCCGCAGCGTGCGGCCGCTCCTTCCTCTTCGCCTCGCCGCGCGGC
TGGACGCTCGCCGTGGCCGACGACTTCTCGGCCACGCTGCTGCACCCCTTCACGGGCGCGTCGGAGAGCCTGCCCGCGTT
GCCGCCATCCTTCCACGACGGGTATCAGATGATCCTCCGTGACATGGTCTGGGACCGGTCGCCTGACGCCGTCATGGTCT
CGCAGGGCAAGGGCGCGTTCTTCTGCCGGCTGCAGGGCGACGGCAGGTCGTGGACCCCCGCCGACCTCTCGCCGCCAGCT
CGCGTCGGCAGCATCACCTACTGCGACGGCGCGTTCTACCTCCTTGACAAGCGCGCCAACAAGGTGACGGCCGTGGACGG
CGCGACCTTCGCCGTGGCCGCCGCGATCGAGCCGCCAGATCTGGCGATGCCCGACCGCTCGTGGG---CACGCGAGTCCA
CGCTCGTCGTGTCGTCCGCCTCCGAGCTCCTCCTCGTGGTGCACGGAGGATGCC------------------ACCGCTCG
AAGGGCCTCTTCAAGGCCTTTCACGCGGACCGCGGGAGCCTGGTGGCCGGGTGGTCGGAGGTCGCCGGCGGCGGCCTCGG
CGACCGCGCCGTGTTCGTGGACCACGCCCGCGGCTTCTGCGTGGAGGCGAACGGGGTCAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCGCGCACGAGGAGGCCAACGCCAACGCCAACTCCGGGTGGGGCGACTGGGGGAGGTACACCGTCTCC
ATGCTCGACCTCGACGGCCTCACCACCCAGAATCTCTCCCACGGCAACCTCTTGAAATGCCTGCACGGTAGGCAGCGCCC
TTCCTGGTCGATGCCAAATCTGCATTGATCTTACTCCTCCAAACGAAACA----ACGTGTGCGAGTTGATCGCATTGAGG
TCGGTTGGTTGCAGTAATAAGCAGAGCTGCCAGTTCGTGTAC--------------------------------------
--T----ATTCTACGAGAAGTGAAAGATCTAGCTTCAGTTACAA----GAATTTGATTATCAAATGTGTCACCGTGTTCA
GAACAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
ACAGTACCAGCCTTTGTATCAGTGTATGT----TTCTCTTCATGCTCTGCCTTTTCACGGCCGACGTGCAGCCTGATTGA
CGATCTTGTTCTGATCGCCTGATCTGCAACACGATGCGTCATGCGCTGCATTGTCGAGACTACATACGTTTTGAGAGGTG
TGCATCGAGTTTCAAATTGGCATGGCATCGTCGCCTCAGGTGTATTCTGTAAGCAATTTTGTGCGGCTTCTGAATTTTGA
CAAAGGAAACAAATATGTGGATGCCAACAATGCAAGCGCAACCAGTGAAGACGAGCTCAAGCAATCACTCGGTGAGCACC
ACTACGGACGAACCAGGAATCTTGGTAGAGAGGGGCCAATATAAGAGGTAAAATGTTGGAGGGGCCCAAATATATAAATC
TTGAGCATCTTCGGCTAACAACACAGGGGTGTTCAAAAAAAAAAAACTACATAGTGGTGTTTTCAATACGAGACTGGTTA
GGTCTCAGTCGATTAAGACTTAGCCAAATCTCAAATGAATCTCCATGCAAAATCAAAAGAATATAACATCTGAGACATAA
CGAAACTCAGTTAGCAAAATTGTTCCAATATATACCATGGGTGGGTGGGTGGGGATGGGGGGGGGGGGAGGCATGGCCCC
TGCTCGCCCGCCCCTGGCTCTGTCCTTGAGCCCACCAAACCAAATTCCCTTTGTGCCACCACCCCACTTACTAACCAGCA
AATATACATGTGTCGTCCGCACAACACTCCACCACCACGACCTGATTCTCTAATTGCTAGGAACTGCTGGTGGTAGAAGA
CTTTGATCCGGCAAAAACCATTGAAGATTATCGTT
>chr1A_2
-AACGGGCCTCAGCTCATTGAAATACTGAGTCACCCAACACAGACGTTAGTGACAAATTTTCAGCCCAAAACAAGTCACT
ACACATCAGG--AAAAAACATGAATCTTGGAGCAACAATCTCTGTGTTAGTGACAAATTTTCAGCTCAGGAAAAAAAAAC
ATGAATCTTGGAGCAGCAATCAACAGGCTGAAAAATCTGAATTCAATTTTCAGGCAACTTACATAGTGACGGAGCTAGAC
CAAACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-AAAGAGGTGGA----TCTATGCACGGTAGATATTTGTATTAGCGCTCAATATAGTAAAGCTCGTGGGCCTCGTGGTTTA
GCTTAAGAATAATCAAACGAAAGAGAAAGAGGATCAGGGAGCAA-TCTTCCTCACAACCTCGATCTAGAATTACTCCGCA
CTCCACAGTACTCAGT--CTACTCCACACGAGCAAAAGTCAACCAAAGCTCATAGCTCCGTTTCCATCGCATTCCTCTTC
GATCCCTCCATCAATCCAAGAACA-C---GCAGACGCGAACACCATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTAGCC
GGGATCGCCGACAGGATCACCGAGCATGCGGACCTCGCGCGCTTCCGCTCGGTGTGCCCTTCTTGGCGCTCGGCCTCGGC
GGAGCACGCCGCCCGCCGCCGCGTGCCCCTGCTCCTCCTGCCCTCCCAGCAGAACTCCCGCGTCAACCGCCGTCTCTGGT
CCCTCGCCGACGACAGCATCACGGAGATCCCCATGCCCGCAGCGTGCGGCCGCTCCTTCCTCTTCGCCTCGCCGCGCGGC
TGGACGCTCGCCGTGGCCGACGACTTCTCGGCCACGCTGCTGCACCCCTTCACGGGCGCGTCGGAGAGCCTGCCCGCGTT
GCCGCCATCCTTCCACGACGGGTATCAGATGATCCTCCGTGACATGGTCTGGGACCGGTCGCCTGACGCCGTCATGGTCT
CGCAGGGTAAGGGCGCGTTCTTCTGCCGGCTGCAGGGCGACGGCAGGTCGTGGACCCCCGCCGACCTCTCGCCGCCAGCT
CGCGTCGGCAGCATCACCTACTGCGACGGCGCTTTCTACGTCCTCGACAAGCGCGCCAACAAGGTAACGGCCGTGGACGG
CGCGACCTTCGCCGTGGTCGCCGCGATCGAGCCGCCAGATCTGGTGATGCCCGACCGCTCGTGGATG---CGCGAGTCCA
CGCTCGTCGTGTCGTCCGCTTCCGAGCTCCTCCTCGTCGTGCACGGAGGATGCC------------------ACCGCTCG
AAGGGCCTCTTCAAGGCCTTTCGCGCGGACCGCGGGAGCCTGGCGGCCGGGTGGTCGGAGGTCGGCGGCGGCGGGCTCGG
CGACCGCGCCGTGTTCGTGGACCACGTCCGCGGCTTCTGCGTGGAGGCGAACGGGGTGAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCGCGCACGAGGAG------GCCAACGCCAACTCCGGGTGGGGCGACTGGGGGAGGTATACCGTCTCC
ATGCTCGACCTCGACGGCCTCACCACGTC------------------CCTCTTGAAATGCCTGCACGGTAGGCAGCGCCC
TTCCTGGTCGATGCCAAATCTGCATTGACCTTGCTCCTCCAAACGAAAAAAACTACGTGTGCGAGTTGATCGCATTGAGG
T----TGGTTGCAGTAATAAGCAGAGCTGCCAGTTCGTCTACTATTCTAGTTTTAACTTGCGCTACTTTGTCGGGCTTGT
TTT----ATTCTACGAGAAGTGAAAGATCTAGCTTCAGTTACGA----GAATTTGATTATCAAATGTGTCACCGTGTTCC
TAAGGGCATGCCCAACGCTACAGGCTGGACGGATGCCTCAGCTCTCCACGTCGGCTCGGGTGGTCCTCGATTGCTGTTCG
TGCTACTTGCAGGCTAAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTAACATACATATGTTACTAGTCTATGTTACT
ACCTTCATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATTACTTTGTAGACTCATTATGCATTGGA
AACCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAACTACTTGCCACATCATCATTTTTG
CTTATGTGGCATCTATGTTACTACCTATGTTACTTCCACTATGACCAGTCTAAAGGGGGATCTGCAGAGGAGGCCGTCTC
CTTCCTGCCAAAAGTGGAGCGAGGCAAAAAAAGAAGAGAGGAAGCTGAAGAAAGCGTGGGGCTGAGATCTGGTAAAGCAG
GAGAGAGAAATATGAATAGTAAAAAAGTTGGCCTGCTGAGGCTAGTGCTGCGTTGGGCAGTAGATTTTTGGACGGTGGTT
TCCCTGCTAATTTTCTACGTGGCAATGGTGAGGCATTAGGTAGGTAGTGCTTCCATTGTACATGCCCTAACAAAGTACGT
ACAGTACCAGCCTTTGTATCAGTGTATGTATGTTTCTCTTCATGCTCTGCCTTTTCACGGCCGACGTGCAGCCTGATTGA
CGA--TTGTTCTGATCGCCTGATCTGCAACACGATGCGCCGCGCGCTGCGTTGTCGAGACTACATACGTTTTGAGAGGTG
TGCATCGAGTTTCAAATTGGCATGGCATCGTCGCCTCAGGTGTATTCTGTAAGCAATTTTGTGCGGCTTCTGAATTTTGA
CAAAGGAAACAAATATGTGGATGCCAACAATGCAAGCGCAACCAGTGAAGACGAGCTCAAGCAATCACTCGGTGAGCACC
ACTACGGACGAACCAGGAATCTTGGTAGAGAGGGGCCAATATAAGAGGTAAAATGTTGGAAGGGCCCAAATATATAAATC
TGGAGCATCTTCGGCTAACAACGAAGGGGTGTTCAAAAAATATATA--------TGGTGTTTTCAATACGATAGTGGTTA
AGTCTCAGTCGACTAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>chr1D_628
--------------------------------------------------------------------------------
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-------------------------------------------------------------------GCCATTGGAGGGT
AGAGAAACACAACGATTTTCTTTAAAAG-ACACACCCGATGATTTGCATGTCTTTCTAGGCACGAATTCCGACGATTGAA
AAAAAAGGTGGA----T-TATGCACGGTAGATATTTGTATTAGCGCTCAATATAGTAAAGCTCGTGGGCCTGGTGGTTTA
GCTTAAGAATAATCAAACC------AAAGAGGACCAGGGAGCAAATCTTCCTCGCAACCTCGATCTAGAAGCACTCCGCA
CTCCACAGTC-----T--CTACTCCACACGAGCAAGAGTCAACCAAAGCTCATAGCTCCGTTTCCATCGCATTCTTCTTC
CATCCCTCCATCAATCCAAGAACA-C---GCAGACGCCATCAGCATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTAGCC
GGGATCGCCGACAGGATCACCGAGCATGCGGACCTCGCGCGCTTCCGCTCGGTGTGCCCATCTTGGCGCTCGGCCTCGGC
GGAGCACGCCGCCCGCCGCCGCGTCCCTCTGCTCCTCCTGCCCTCCCAGCAAAACTCTCGCGTCAACCGCCGTCTCTGGT
CCCTCGCCGACGACAGCATCACGGAGACCCCTATGCCCGCCGCGTGCGGCCGCTCCTTCCTCTTCGCCTCGCCGCGCGGC
TGGACACTCGCCGTGGCCGACGACTTCACGGCCACGCTGCTGAACCCCTTCACGGGCGCGTCCGAGAGCCTGCCCGCGTT
GCCGCCATCCTTCCACGACGGGTATCAGATGATCCTCCGTGACATGGTCTGGGACCGCTCACCTGACGCCGTCATGGTCT
CGCAGGGCAAGGGCGCGTTCTTCTGCCGGCTGCAGGGCGACGGCAGGTCGTGGACCCCCGCCGACCTCTCGCCGCCAGCT
CGCGTCGGCAGCATCACCTACTGCGACGGCACGTTCTACCTCCTTGACAAGCGCGCCAACAAGGTGACGGCCGTGGACGG
CGCGACCTTCGCCGTGGTCGCCGCGATCGAACCGCCAGATCTGGTGATGCCCGACCGCTCGTGGTT---ACGCGAGTCCA
CGCTCGTCGTGTCGTCCGCCTCCGAGCTCCTCCTCGTCGTGCAGGGAGGATGCC------------------ACCGCTCG
AAGGGCCTCTTCAAGGCCTTTCGCGCGGACCGCGGGAGCCTGGCGGCCGGGTGGTCGGAGGTCGCCGACGGCGGCATCGG
CGACCGCGCCGTGTTCGTGGACCACGCCCGCGGCTTCTGCGTGGAGGCGAACGGGGTGAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCGCGCACGAGGAG------GCCAACGCCAACTCCGGGTGGGGCGACTGGGGGAGGTACACCGTCTCC
ATGCTCGACCTCGACGACCTCACCACCCAGAATCTCTCCCACGGCAACCTCTTGAAATGCCTGCACGGTAGGCAGCGCCC
TTCCTGGTCGATGCCAAATCTGCATTGATCTTCCTCCTCCAAACGAAAAAAACTACGTGTGCGAGTTGATCGCATTGAGG
T----TGGTTGCAGTAATAAGCAGAGCTGCCAGTTCGTGTACTATTCTAGTTTTAACTTGCGCTACTTTGTCAGACTTGT
TTTATTCATTCTACGACAAGTGAAAGATCTAGCTTCAGTTACAAGAACGAATTTGATTATCAAATGTGTCACCGTGTTCC
TAACAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
ACAGTACCAGCCTTTGTATCAGTGTATGTATGTTTCTCTTCATGCTCTGCCTTTTCACGGCCGACGTGCAGCCTGATTGA
CGA--TTGTTCTGATCGCCTGATCTGCAACACGATGCGCCGTGCGCTGCGTTGTCGAGACTACATACGTTTTGAGAGGTG
TGCATCGAGTTCCAAATTGGCATGGCATCGTCGCCTCAGGTGTATTCTGTAAGCAATTTTGTGCGGCTTCTGAATTTTGA
CAAAGGAAACAAATATCTGGATGCCAACAATGCAAGCACAACCAGTGAAGACGAGCTCAAGCAATCACTCGGTGAGCACC
ACTACGGACGAACCAGGAATCTTGGTAGAGAGGGGCCAATATAAGAGGTAAAATGTTGGAGGGGCCCAAATATATAACTC
TTGAGCATCTTCGGCTAACAACACAGGGGTGTTCAAAAAA---AAACTACACTGTGGTGTTTTCAATACGAGGCCGCG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CCTGGCTCTGTCCTTGAGCCCACCAAACCAAATTCCCTTTGTGCCACCACCCCACTTACTAACCAGCA
AATATATATGTGCCGTCCGCACAACACTCCACCACCACGACCTGATTCTCTAATTTCTGGGA------------------
-----------------------------------
>chr1B_958
TCCTC---------------------------------------------------------------------------
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----CCTTCATCAATCCAAGAACA-C---GCAGACGCCAACGACATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTAGCC
GGGATCGCCGACAGGATCACGGAGCACGTGGACCTCGCGCGCTTCCGCTCGGTTTGCCCATCTTGGCGCTCGGCCTCGGC
GGAGCACGCCGCACGCCGCCGCACCCCCCTGGTCCTCCTGCCCTCCCAGAGCTACTCCCGCGTCGACCGCCGTCTCTGGT
CACCCGCCAACGACAGCATCACGGAGACCCCCATGCCCGCCGCGTGCGGTCGCTCCTTCCTTTTCGCCTCGCCTCGTGGC
TGGACCCTCGGCGTGGCCAACGACCTCTCGGCCACGCTGCTGCAACCATTCACCGGCGCGTCGGAGAGCCTGCCCGCACT
GCCGCCATCCTTCCACGGCGAATATGAGAAGATCCTCCGTGACATGGTATGGGATCGGTCCCCTGGCGCCGTCATGATCT
CGCCGGGCAAAGGCGCGTTCTTCTGCAAGCTGCCGGGCGACGGCGGGTCATGGAGCGCCGCCGGATCCTCGCAAACGGCT
GCCGTCAGCAGCATCACCTACGATGACGGTACGTTTTACCTTCTGGACGGGCGAGCCCGCAGGGTCACGGCCGTGGACGC
CGCAACTTTCGCCGTGACCGCCGTAGTCGAGCCACCAGATCTGGTGTCGCCCAGACATGCTTGGTGCACACCCGAGTCCA
CGCTCGTCGTGTCCTCCGG---CGAGCTGCTCCTCATCGTCAGGACAGCCGG------------AGCACCATACGGCTCG
GGGGGCCTCTTCAAGGTCTTCCGCGCGGACAGCCGGAGCCTGGCGGCCGGATGGTCGGAGGTCGCCGGCGGCGGCATCGG
CAACCGCGCCCTGTTCGTGGACCATCTGCGCGGCTTCTGCGTGGAGGTCAGCGGGCTCAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCTCGCACGAGATG------GTGAACGACGACTACGGGCTGGACGTTTATGGGAGGTACACCGTCTCG
GTGCTCGACCTCGACGACCTTTCCACCCAGGATCTCTCATACGGGAACCTGTTGAAGTGCATG-----------------
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-----------------------------------
>chr1A_958
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TC
CAACCCTCCATCAATCCAAGAAGCTC---GCAGGCGGCAACACTATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTTGCC
GGGATCGCCGACAGGATCACCGAGCATGTGGACCTCGCGCGCTTCCGCTCGGTGTGCCCATCTTGGCGCTCGGCCTCGGC
GGAGCACGCCGCGCGCCGCCGCGCCCCCCTGCTCCTCCTGCCCTCCCAGAGCTACTCCCGCGCCGACCGCCGTCTCTGGT
CCCCCGCCGACGACAGCATCAAGGAGACCCCCATGCCCGCCGCGTGCGGCCGCTCCTTCCTTTTCGCCTCGCCCCGCGGC
TGGACGCTCGGCGTGGCCAACGACCTCTCGGCCACGCTGCTGCAACCATTCACCGGCGCGTCGGAGAGCCTGCCCGCGCT
GCCGCCTTTCTTCCACGGCGAATATGAGAAGATCCTCCGTGACATGGTATGGGATCGGTCCCCTGGCGCCGTCATGATCT
CGCCGGGCAAAGGCGTGTTCTTCTGCAAGCTGCCGGGCGACGGCGGGTCATGGAGCGCCGCCGGATCCTCGCAAACGGCT
GCCGTCAGCAGCATCACCTACGACGACGGTACGTTTTACCTTCTGGACGGGCGAGCCCGCAGGGTCACGGCCGTGGACGC
CGCAACTTTCGCCGTGACCGCCGTAGTCGAGCCACCAGATCTGGTGTCGCCCAGACACGCTTGGTGCACACCCGAGTCCA
CGCTCGTCGTGTCCTCCGG---CGAGCTGCTCCTCATCGTCAGGACGCACCTCTTGTTCCAAGTAGCACCATACGGCTCG
GGGGGCCTCTTCAAGGTCTTCCGCGCGGACAGCCGGGGCCTGGCGGCCGGATGGTCGGAGGTCGCCGGCGGCGGCATCGG
CAACCGCGCGCTGTTCGTGGACCATCTCCGCGGCTTCTGCGTGGAGGCCGGCGGGCTCAACGGGGTGCGGAGGAACTGCG
TGTACGTGGCCAGCTCGCACGAGATG------GTGAACGACGACTACGGGCTGGACGTCTATGGGAGGTACACCGTCTCG
GTGCTCGACCTCGACGACCTCACCACCCAGGATCTCTCGTACGGGAACCTGTTGAAGTGCATG-----------------
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-----------------------------------
>chr1D_967
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------CCATCAATCCAAGAAGCTAGTAGCAGGCGGCAACACTATGAGCTGGTCCGACCTGCCAGCCGAGCTCGTTGCC
GGGATCGCGGACAGGATCACCGAGCATGCGGACCTCGCGCGCTTCCGGTCGGTGTGCCCATCTTGGCGCTCGGCCTCGGC
GGAGCACGCCGCGCGCCGCCGCACCCCCCTGCTCCTCCTGCCCTCCCAGAGCTACTCCCGCGTCGACCGCTGTCTCTGGT
CCCCCGCCGACGACAGCATCAAGGAGACCCCCATGCCCGCCGCGTGCGGCCGCTCCTTCCTCTTCGCCTCGCCTCGCGGC
TGGACGCTCGGCGTGGCCAACGACCTCTCGGCCACGCTGCTGCAACCATTCACCGGCGCGTCGGAGAGCCTGCCCGCGCT
GCCGCCATCCTTCCACGACGAATATGAGAAGATCCTCCGTGACATGGTATGGGATCGGTCCCCTGACGCCGTCATGATCT
CGGCGGGCAAGGGCGCGTTCTTCTGCAAGCTGCCGGGCGACGGCGGGTCATGGAGCGCCGCCGGATCCTCGCAAACGGCT
GCCGTCAGCAGCATCACCTACGACGACGGTACGTTTTACCTTCTGGACGGGCCAGCCCGCAGTGTCACGGCCGTGGACGC
CGCAACTTTCGCCGTGACCGCCGTAGCCGAGCCACCAGATCTGGTGTCGCCCAGACACTCTTGGTGCACACCCGAGTCCA
CGCTCGTCGTGTCCTCCGG---CGAGCTGCTCCTCATCGTCAGGACGCACCTCTTGTTCCAAGTAGCACCATACGGCTCG
GGGGGCCTCTTCAAGGTCTTCCGCACGGACAACCGGAGCCTGGCGGCCGGATGGTCGGAGGTCGCCGGCGGCGGCATCGG
CAACCGCGCCCTGTTCGTGGACCATCTCCGCGGCTTCTGCGTGGAGGCCAACGTGGCCA---------------------
--------------------------------------------------------------------------------
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-----------------------------------
>SNPs
---------------------S---S------------------S---S----S--------------------------
-----S----SS--------------------------------------------------------------------
----------S------------S-------------------S-------SS---------------S-S---S-S---
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---SS--
--------S---S------S-------SS--------S------------------------------------S-----
------SSSS-SSSSS------------------------S----S--------S-------------------------
------------S----S-------------------------------------S---------------------S-S
-------------S--SS--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------------------------------------------------S
---------------------------------S------------------------------------S---------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-------------------S---------------
-------------------------------------S------------------------------------------
----------------------S--------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------SSSSSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------S-------------------------------
-SSSS---------------------------------------------------------------------------
-------------------------------------------------------------------------------S
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SS---------------------------------S-S--------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S-S--------SS---------------------------
S-----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--------------------------------------------------------------------
------S-----S------------------------------------------S--S---SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GCGGGCGGACCTAAAATTTG------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>reverse_2129
--------------------------------------------------------------------------------
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------------------------------------------------CAACGTGTGCGAGTTGATCG------------
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-----------------------------------
