>input_sequence_61196
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-------------------------------------------------------------------------------A
ACAACTGTTGGCGACGTTCTCGTTGTCAT----GGCTGAGAACCCGGCTGCTGCTGCTGCAGTTAATCACGGCGAAGGCC
TCCGGCTACCGGAGACGTCGTCGATATGCGTCACGGAGAGCGCCGCACACAACTTCGAGGTGACCAATTATGCGCTGCTC
GAGGGCCTGGGCGTCGGGAAGTACATCACCTCAAGCACATTCAGGGTCGGCGGCTACGATTGGAATATCATGTTCTACCC
GGACGGAAGCACGAAGGACTTTACCGGCAACGCGTCAGCCTTTTTGTATTATCTCAGTAAGGGGAAGGACGGGGTGAGGA
CAAAATTCACCTTAACCCTGCTGGACGGTCAAGGCAATGCACAGGAAATCAACAAGGATTACGTAGCAGCGCACATCTTT
TCTCTGGAAGCTCCGAACATG-----------------------------------------------------GACTAT
ACGGTGCGTTCTCACCGTGATCAAGGAACCGCCCACGGAGTGCCGAAGAAATCTCATCGTAGTTCCACCGTCGAAGCTGC
CCGGCAACATCAAGCGCACCCTCAAGGACGGGAAGGGCGCAGACGTCACGCTGCTCGTGGGCGGCAGGGAGTTCAGTGCG
CACAGGTTCATGCTAGCCGCACGGTCGCCGGTTTTCGACGCACAGCTCTTTGGCCCGATGATGGACGAGGACACGCGGTG
CATAGAGGTTGTCGACATGGACCCGGCCATCTTTGAGATGCTTCTTCACTACATCTACATGGATTCGCTGCCCCCGCGTG
ACGAGAAAGGTTACGATGCTGCTTCCATGCAGCACTTGCTAGTCGCGGCAGATCGGTACGGGCTGGACAGGCTCAAGGTG
ATGTGTGAAGAGGAACTGTCCAAAAGCATCAACGTCCAGACCGTCACGAGTACATGGGCGGTTGCAGATCAGCACTTCTG
CGAAGGGCTCAAGAATGCTTGTGAGGAGTTTCTTTCTGTCCCGGGAATAGGGACCATTGTCTCTTTAAGAAACGGGTTCA
AACGCCTCATGGCAAAGCTGGAACT---GGGGGACGAGGAGGCATCTGCCGCGGGGACGAAGTAATCTTG---TAAGACC
AAAAAATAATATAGTGAGA-------------------------------------------------------------
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>chr2A_1_TraesCS2A01G473400
ACGCCACTCTTCCTCTTGTCCCCTCCAACCAACACTTGCTGCAAAACGATGCCCCC------AGGAGGGAGAACGACATC
GAAA-CATCGCCATCATCCGATCCGGTAGACCCAGATCTAGGGTTTCTCC-C--GGAACCTTCCGATCAG--GTTGACGT
GACCTGCAACGACGATGCCTCGAGAAGGGAACGACGTCCGAGACGTCGCCATCGTCTGCCATGATCAGGTAGTCAGGCGC
GATTTTCATCGGAAGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACAGAGCGGAGTCTCTCCACGAAGACGAACGCCG
CCGTCGGTAAACCGACGGAGATCCGACATCTCCTCAGCGGTCCCTCCACGCGCTGCCGGTCGGCATAAGGCTACTCCGCA
GTGGATCTGATCGGGGCG--TTGGATCCGCAGTCGCCGCCGCCACCATCTCCGCGCAGATCAGGTACCCCGTCGGATAGG
GCGCTGACACCGCCACCGTCCATCTCAGGGCCGCCGCTCCGCCGGTTTAAGGCACTTCGGCCACCGCCGCACGGCAAGGG
ATCGCCGCCCCGGCCGCCGCCTTCGGATCTCATGAGAA-GGCCGCCCCTGCCGCCTCAGATGAGATCTCGCCGCATCCAC
CCGCCCAGGTGCCTTCGGCGCCGGG-CCCACCGCCACCGCGGCCCTCGCCGGCG---GCAG---------AGGGATGCGC
GAGAGGAGGCCTGCGGCGCTAGGGTTC-G-GGG-GCCCCTTGCGTCGCCTAGGGGGAGGCGACGCGAGGGTGAGGAATAA
TGAAAGCAATCATACTAATCTAAATCTCCGAGGAGTGTCAGGAAGTTGGAGAAGGTTTACGGCCGGCACACCTATCTGGA
ACCATATGCCCGACCGAATCGTAGTGGTATTTGAAAAGGAAACTATTACGTGTATCAGAAAAGGAATCGCAATGATTGCT
GGAATCATTACGATACGAAACAACGATCCTCCTTGTATAAATTCCGTGGCTAGCTGAAT--------AGAGATCATTGGA
ACAACTGTTGGCGACGTTCTCGTTGTCAT----GGCTGAGAACCCGGCTGCTGCTGCTGCAGTTAATCACGGCGAAGGCC
TCCGGCTACCGGAGACGTCGTCGATATGCGTCACGGAGAGCGCCGCACACAACTTCGAGGTGACCAATTATGCGCTGCTC
GAGGGCCTGGGCGTCGGGAAGTACATCACCTCAAGCACATTCAGGGTCGGCGGCTACGATTGGAATATCATGTTCTACCC
GGACGGAAGCACGAAGGACTTTACCGGCAACGCGTCAGCCTTTTTGTATTATCTCAGTAAGGGGAAGGACGGGGTGAGGA
CAAAATTCACCTTAACCCTGCTGGACGGTCAAGGCAATGCACAGGAAATCAACAAGGATTACGTAGCAGCGCACATCTTT
TCTCTGGAAGCTCCGAACATG-----------------------------------------------------GACTAT
ACGGTGCGTTCTCACCGTGATCAAGGAACCGCCCACGGAGTGCCGAAGAAATCTCATCGTAGTTCCACCGTCGAAGCTGC
CCGGCAACATCAAGCGCACCCTCAAGGACGGGAAGGGCGCAGACGTCACGCTGCTCGTGGGCGGCAGGGAGTTCAGTGCG
CACAGGTTCATGCTAGCCGCACGGTCGCCGGTTTTCGACGCACAGCTCTTTGGCCCGATGATGGACGAGGACACGCGGTG
CATAGAGGTTGTCGACATGGACCCGGCCATCTTTGAGATGCTTCTTCACTACATCTACATGGATTCGCTGCCCCCGCGTG
ACGAGAAAGGTTACGATGCTGCTTCCATGCAGCACTTGCTAGTCGCGGCAGATCGGTACGGGCTGGACAGGCTCAAGGTG
ATGTGTGAAGAGGAACTGTCCAAAAGCATCAACGTCCAGACCGTCACGAGTACATGGGCGGTTGCAGATCAGCACTTCTG
CGAAGGGCTCAAGAATGCTTGTGAGGAGTTTCTTTCTGTCCCGGGAATAGGGACCATTGTCTCTTTAAGAAACGGGTTCA
AACGCCTCATGGCAAAGCTGGAACT---GGGGGACGAGGAGGCATCTGCCGCGGGGACGAAGTAATCTTG---TAAGACC
AAAAAATAATATAGTGAGA-------------------------------------------------------------
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------------------------------------------------------------AATTGCATACGATTTTTGGA
GGATTAGGATCTTCAAGA--TTTTTTCCTAGGACGGTCATTTGATTCATAAGATTGAAATCCTTAGGAACTTTTCCATCG
GATTCATTTTTACAACATTTTGGAGGAAAATTTACATCGACTCAAACCGCTTTGTTGCATTTCATTGTTTTTCCTATATG
CTATGAAACACTCTTTCATATCCTGCAGAGGGCAAGAGAACATGACACCCTATTCCTCTGTTTTTTCTATCCTTGTATTT
TGATAATCCCGCGAATCAAAGAGGCCCTTACACGGTACTAACTGAGCAAGATGATGGCAATGCCCAAAAGGTTGGAATCG
ACTTTTTTCTTGAGCGAAACACACCCGGACTTTATTAATCGACAGAAAAGTTTACGCAGTCCAGGCTCCAGAAGCCACAC
ATAGCGTCCATGATTTAAATCTAATGAGTTCCTTGCTAAATTATGAGCACGTACATTTGTATCCATAAATTCGTGTTTGA
ACATAACTTCAGGCCCCGGCAAAAAAAAAGAACATAACTTCAGGCACACATCTCATAATATCACATATCTCCTTAATAAC
CATCACATTCCCTATGAGGCTTCCGTCCTGGATACTACATATACCACTCCTAAGCAATCCGGAGTAATCCTATAGTTAGA
TTCCCATCTGAAATTGCGCTCTCTGAGAGTTCACCAACTTTGGGCCGTCAGATCTCAAGCTTGATGTGATTCTAGCCATC
TGTCTGGGCCTCCAATGGCTCCTGACCGTCAAATAAATATCAGGTCTGAAGAAATGAATAGTAAAAAAAATCCCGTAGTT
AGATTCCCATCTGAAATTGGGCTCTCTCAGAGCTCAGCAACTTTGGACCGTCAGATCTCGAGCTTGATGCGATTCTAGCC
ATCTGACTGGGGCTCCAGTGATTCCTGACCGTCAGATAAATATCAGGTCTGAAGAAATGAATAGTAAAAAACAAATACAC
TTAGGGATTTTGGCCTTATCTGGCTGAACT
>chr1B_1
ACGCCGCTCCTCCTCTTGTCCCCTCCAGCCAACACTTGCTCCAAAACGATGCCCCC------AGGAGGGAGAACGACATC
GAAA-CGTCGCCATCATCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-C-CGAAACCTTCCGATTAG--GTTGACCT
GA-CTGCAACGACGATACCTCGAGAAGGGAACGACGTCCGAGACGCCGCCATCGTCCGCCATGAC--GGCAGTTAGGCGC
GATTTTCACCGGAGGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCTCTCCACGAAGACGAACGCCG
CCGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACCGGTCCCTCCACGCGCCGTCGGTCGGCGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GCGTTGGATCCGCAGTCGCCGCCACCACCATCTCTGCGCAGATCAGGTACCCCGTCGGATGGG
GCGCTGCCACCGCCGCCGTCCAT-TCAGGGCCGCCGCTCCGCCGGCTTATGGCGCTTCGGCCACCGCCGCACGGCAAGGG
ATCGCCGCCCCAGCCGCCGCCTTCGGATCTCACGAGAAGGGCCGCCCCTGCCGCCTCAGATGAGATCTCGCCGCACCCAC
CCGCCCAGGTGCCTTCGGCGTCGGGCCCCGCCGCCACCGCGGCCCTCGCCGGCG---GCAGCGGCGGCAGAGGGAGGCGC
GAGAGGAGGCCTGCGGCGCTAGGGTTC-G-GTG-GCCCCTGGCGTTGCCTAGGGGGAGGCGACGCGAGGGGGAGG-----
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>chr3D_1
ACGCCGCTCCTCCTCTTGTCCCCTCCAGCCAACACTTGCTCCAAAACGATGCCCCC------AGGAGGGAGAATGACATC
GAAA-CGTTGCCATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-C--GGAACCGTTCGATCAG--GTTGACGT
GACCTGCAACGACGATGCCTCGAGAAGGGAACGACGTCCGAGACGCCGCCATCATCCGCCACGAC--CGCAGTCAGGCGC
GATTTTCACCGGAAGCCACGTCGTCCCGATCTCGCGGCTGGCTGGAACCGAGCGGAGTCTCGCCATGAAGACGAACGCCG
CCGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACCGGTCCCTCCACGCGCCGCCGGTCGGCGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GCGTTGGATCCGCAGTCACCGCCGCCACCATGTCCGCGCAGATCAGGCACCCCGTCGGATGGG
GCACTGCCACCGCCGCCGTCCATCTCAGGGCCGCCGCTCCGCTGGCTTATGGCACTTCGGCCACCGCCGCACGACAAGGG
ATCGCCGCCCTAGCCGCCGCCTTCGGATCCCACGAGAAGGGCCGCCCCTGCCGCCTCAGATGGGATCTCGCTGCATCCAC
CCGCCCAGGTGCCTTCGACGCCGGG-CCCGCCGCCACCGCGGCCCTCGCCGGCG---GCAGCGGCGGCAGAGGGAGGCGC
GAGAGGAGGCCTGCGGTGCTAGGGTTC-G-G-G-GCCCCTGGCGTCGCCTAGGGGGAGGCGACGCGAGGGGGAGG-----
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>chr3D_1
ACGCCGCTCCTCCTCTTGTCCCCTTCAGCCAACACTTGCTCCAAAACGACGCCCCC------AGGAGGGAGAACGACATC
GAAA-CATCGCCATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CCGC--GGAACCTTCCGATCAG--GTTGACGT
GATCTGCAACGACGATGCCTCGAGAAGGGAACGACGTCCGAGACGCCGCCATCGTCCGCCATAAC--TGCAGTCAGGCAC
GATTTTCACTGGAAGCCACGTCGTCCCGGTCTCGTGGTTGGCTGGAACCGAGCGGAGTCTCGCCACGAAGACGAACGCCG
TCGTCGGTAAACCGGCGGAGATCTGACATCTCCTCACCGGTCCCTCCACGCGCCGCCGGTCGGTGGAAGGCCACCCCGCG
GCGGATCCGGTCGGG--GTGTTGGATCCGCAGTCGCCGCCGCCACCATCTCCTCGCAGATCAGGTACCCCGTCGGATGGG
GCGCTGCCACCGCCGCCATCCATCTCAGAGCTGCCGCTCCGCCGGCTTATGGCACTTCGGCCACCGCCGCATGGCAAGGG
ATCGCCGCCCCAGCCGCCGTCTTCGGATCTCACAAGACGGGCCGCCCCTGCCGCCTCAGATGAGATCTCGCCGCATCCAC
CCACCCAGGTGCCTTCGGCGCCGG--CCCGCCGCCACCGCGGCCCTCGCCGGCG---GCAGTGGTGGCAGAGGG-GGCGC
GAGTGGAGGCCTGCGGCGCTAGGGTTTGG-G-G-GCCCTTGGCGTTGCCTAGGGGGAGGCGACGCGAG------------
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>chr5D_1
ACGCCGCTCCTCCTCTTGTCCCCTCCAGCTAACACTTGCTTCAAAACGATGCCCCC------AGGAGGAAGAACGACATC
GAA--CGTCGCCATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-C-CGAAACCTTCCGATCAG--GTTGACGT
GACCTGCAACAACGATGCCTCGAGAAGGGAACAACGTCCGAGACGCCGCCATCGTCCGCCATGAC--CGCAGTCAGGCGC
GATTTTCACCGGAAGCCACATCGTCCCGATCTCGCGGTTGGCTGGAACCGAGTGGAGTCTCGCCACGAAGACGAACGTCG
CCGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACCTGTCCCTCCACGCGCCGCCGGTCGGCGGAAGGCCACCTCGCG
GCGGATCCGATCGGG--GCGTTGGATCCGCAGTCGCCGCCGCCACCATCTCCGCGCAGATCAGGCACCCCGTCGGATGGG
GCGCTGCCACCGCCGCCGTCCATCTCAGGGCCGCCGCTCCGCCGGCTTATGGCGCTTCGGCCACCGCTGCACGGCAAGGG
ATCGCCGCCCCAGCCGCCGCCTTCGGATCCCACGAGAAGGGCCGCCCCTGCCGCCTCTGATGAGATCTCATCGCATCCAC
CCGCCCAGGTGCCTTCGGCGTCGGG-CCCGCCACCACCGCGGCCCTCGCCGGCG---GCAGCGGCGGCAGAGGGAGGCGC
GAGAGGAGGCCTGCGGCGCTAGGGTTC-G-G-GAGCCCCTGGCGTCGCCTAGGGGGAGGCGACGCGAGGGGGAG------
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>chr5D_1
ACGCCGCTCCTCCTCTTTTCCCCTCCAGCCAACACTTGCTCCAAAACGATGCCCCC------AGGAGGGAGAACGACATC
GAAA-CGTCGCCATCGTCCAATCCGGTAGAGCCAGATCTTGGGTTTC-CC-C-CGGAACCTTCCGATCAG--GTTGATGT
GACCTGCAACGACGATGCCTCGAGAAGGGAACAACGTCCGAGACGCTGTCATCGTCCCTCATGAC--CGCAGTCGGGCAT
GATTTTCACGGGAAGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCGCGCCACGAAGAAGAACGCCG
ATGTCGGTTAACCGGCGGAGATCCGACATCTCCTCACCGGTCCCTCCACGCGCCGCCGGTCGGCTGAAGGCCACCCCGTG
GCGGATCCGATCGGG--G--TTGGATCCGCAGTCGCCGCCGCCACCATCTCCGCGCAGATCACGCA-CCCATCGGATGGG
GCGCTGCCACCGCCGCCGTCCATCACAGGGCCTCCACTCCGCCGGCTTATCGCGCTTCGGCCACCGCCGCACGACAAGGG
ATCGCCGTCCCAGCCGCTGCCTTCGGATCCCATGAGAAGGGCCACCCCTGCCGCCTCCGATGAGATCTCGCCACGTCCAC
CCGCCCAGGTGCCTTCGGCGCCGGG-CCCGCCGCCACAGTGGCCCTCGCCGGCG---GCAGCGGCGGCAGAGGGAGGCGC
GAGAGGAGGCCTGCGGCGCTAGGGTTCGG-G-G-GCCCCTGGCGTCGCCTAGGGGGAGGCCACGCGAGGGGGAG------
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>chr4D_1
ACGCCGCTCCTCCTCTTGTCCCCTCCAGCCAACACTTGCTCCAAAACGATGCCCCC------AGGAGGGAGAACGATATC
GAAA-CGTCGTCATCGTCCGATCTGGTAGACCCAGATCTAGGGTTTC-TC-C-CGGAACCTTCCGATCAG--GTTGACGT
GACCTGCAATGACGATACCTCGAGAAGGGAACGACGTCCAAGACGCCGGCATCGTCCGCCATGAC--CGCGGCCAGGCGC
GATTTTCACCGGAAGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCACGCCACGAAGACGAACGCCG
CTGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACCGGTCCCTCCACGCGCCGCCGGTCGGGGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GCATTGGATCCGCAGTCGCCGCCGCCACCATCTTCGCGCAGATCAGGCACCCCGTCGGATGGG
GCGCTGCCACCGCCGCTGTCCATCTCAGGGCCACCGCTCCGCCGGCTTATGGCGCTTCGGCCACCGCCGCACGGCAAGGG
ATCGCCACCCCAACCACCGCCTTCGGATCCCACGAGAAGGGCCGCCCCTGCCGCCTCAGATGAGATCTCGCTGCATCCAC
CCGCCCAGGTGCCTTCGGCGTCGGG-CCCACCGCCACCGCGGCCCTCGCCGGCG---GCAGCGGCGGCAGAGGGAGGCGC
GAGAGGAGGCCTACGGCGCTAGGGTTC-GAG-G-GCCCCTGGCGTCGCCTAGGGGGAGGCGACGCGAGGG----------
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>chr7D_1
ACACCGCTCCTCCTCTTGTACCCTTCAGCCAACACTTGCTCCAAAACGATGCCCCCCTCCCCAGGAGGGAGAACGACATC
GAAA-CGTCGTCATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-C-CGGAACCTTCCGATCTG--GTTGACGT
GACCTGCAACAACGATGCCCCGAGAAGGGAACGACGTCCGAGACGCCGCCATCCTCCACCATGAC--CGCAGTCAGGCGT
GATTTTCACCGGTAGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCAAGCGGAGTCTCGCAACGAAGACAAACGCCG
CCGTCGGTAAACCGGCGGAGATTCGACATCTCCTCACCGGTCCCTCCACGCGCCGCCGGTCGGCGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GTGTTGGATCCGCAGTCGCCACCGCCACCATCTCCGCGCAGATCAGGTACCCCGTCGGATGGG
GCGCTGCCACTGCCGCCGTTCATCTCAGGGCCGCCGCTCCGCCGGCTTATGGCGCTTCGGCCACCACCGCACGGCAATGG
ATCGCCGCCCCAGCCGCCGCCTTCGGATCTTACAAGAAGGGTCGCCCCTGCCGCCTCAGATGAGATCTCGCCGCATCCAC
CCGCCCAGGTGCCTTCGGCGCCGGG-CCCGCCGTCACCCTGGCCCTCGCCGGCG---GTAGCAGCGGCAGAGGGCGGCGC
GAGTGGAGGCCTGCGGCGCTAGGGTTTGG-G-G-GCCCTTGGCGTCGCCTAGGGGGAGGCGACACGAGGGGGAG------
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>chr3B_1
ACGCCGCTCCTCCTCTTGTTCCCTCCAGCCAACACTTGCTCCAAAATGATGCCCCC------AGGAGGGAGAACGACATC
GAAA-TGTCGCCATCGTCTGATCCGGTAGACCTAGATCTAGGGTTTC-CC-C-CGGAACCTTCCGATTTTAAGTTGACGT
GACCTGCAACGACGATGCCTCAAGAAGGGAACGGCGTTCGAGATGCCGCCATCATCCGCCATGAC--CGCAATCAGGCGC
GATTTTCACCGGAGGCCATGTCGTCCTGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCTCTCCACGAAGACGAATGCCA
CCGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACCGATCCCTCCCCGTGTCGCCGATCGACGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GCAATTGATCCGCAGTCGCCGCCGCCACCATCTTCGCGCAGATCAGGTACCCCATCGGATGGG
GCGCTGCCACCGCCGCCGTCCAT-TCAGGGCCGCCGCTCTGCCGGCTTATGGCGCTTCGGCCACCGCCGCACGGCAAGGG
ATCGCCGCCCCAGCCGCCGCCTTCGGATCTCACGAGAAGGGTCGCCCCTGCCGCCTCAGGTGAGATCGCGCCGCATCCAC
CCGCCCAGGTGCCTTCGGCGCCGGG-CCCACCCT---------------CGCCGGTGGCAGCGGCGGCAGAGGGAGGCAC
GAGAGGAGGCCTGCGGCGCTAGGGTTCGG-G-G-CCCCCTGGCGTCGCCTAGGGGGAGGCGACGCGAGGGGGAGG-----
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>chr1A_1
ACGCCGCTCCTCTTCTTGTCCCCTCCAACCAGCACTTGCTCCAAAACGATGCCCCC------AAGAGGGAGAACGACATC
GAAAACATCGTCATCGTCCGATCCGGTAGACCCAGATCTGGGGTTTC-CC-C-AGGAACCTCCCGATCAG--GTTAACGT
GACCTGCAACGACGATGCCTCGAGAAGGGAACGACGTCCGAGACGCCGCCATCGTCCGCCATGAC--CGCAGTCAGGCGT
GATTTTCACCGGAAGCCACGTCGTCCCGATCTTGCGGCTGGTTGGAACTGAGTGGAGCCTCTCCACGAAGACGAACGCCG
TTGTCGGTAATCCGGCGGAGATCCGTCATCTCCTCACCTGTCCCTCCACGCGCCGTCGGTCGGCGGAAGGCCATCCCGCG
GCGGATCCGATCGGG--GCGTTGGATCCGCAGTCACCGCCGTCACCATCTCCGCACAGATCAGCCACCCCGCCGGATGGG
GC-CTGCCACCGCCGCCGTCCATCGCAGGGCCGCCGCTCCGCCGGCTTATGGCGCTTCGGCCACCGCCGCACGGCATCGG
TTCGCCGCCCCAGCCGCTGCCTTCGGATCCCATGAGAGGAGCCGCCCCTGCCGCCTTAGATGAGATCTCGTCGCATCCAC
CCGCCCAGGTGCCTTCGGCACCGGG-CC-GCCACCACCGCGGCCCACACCGGCG---GCAG---------AAGGAGAGGG
AGGGGGAGGCCTGCGGTGCTAGGGTTTGG-G-A-ACCCCTGGCGTCGCCCAGGGGGAGGCGACGTGAGGGGGAG------
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>chr5A_3
--GCCGCTCCTCCTCTTGTCCCCTCCAGCCAACACTTGCTCCAAAATGATGCCCCC------AGGAGGGAGAACGACATC
AAAAACGTTGCCATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-C-CGGAACCTCCCGATCAG--GTTGACGT
GACCTGCAACGACGATG-CCCGAGAAGGGAACGACGTCCGAGACGCCGCCATCGTCCGCCAAGAC--CGCAGTCAGGCGC
GATTTTCACCGGAAGTCATGTCGTCCCGATCTCGCAGCTGGCTGGAACCGAACGGAGCCTTGCCACGAAGACGAACACCG
TCGTCGGTAATCCGGCGGAGATCCTTCATCTCCTCACTGGTCCCTCCATGCGTCGCCGGTCGGCGGAAGGCCACCCCGCG
GCGGATCCGATCGGG--GCGTTGGATCCGCAGTCGTCGCTGTCACCATCTCCGCACAGATCAGCCACCCCGCCGGATGGG
GCGCTGCCACCGCCGCCGTCCA---CAGGGCCGTCGCTCCGCCGGCTTATGGCGCACTGGCCACCGCCGCACGGCATGGG
ATCGCCGCCCCAGCCGCCGCCTTCGGATCTCACAAGAGGGGCCGCCCCTGCCGCCTCAGATGAGATCGCGCTGCATCCAC
CCGCCCAGGTGCCTTCGGCACCGGG-CCCGCCGCCACCGCGGCCCACGCCGGCG---GCAG---------AAGGAGGGGG
AGGGGGAGGCCTGCGGTGCTAGGGTTGAG-G-G-ACCCCTGGCGTCGCCCAGGGGGAGGCGACGCCAGGGGAGG------
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>chr4B_7
------CTCCTCCTCTTGTCCCCTCCAACCAACACTTGCTTCAAAACGATGCCCCT------AGGAGGGAGAACGACATC
GAAA-CGTCGCCATCGTCCAATTCGGTAGACCCAGATCTAGGGTTTC-CT-C-CGGAACCTTTCGATCAG--GTTGATGT
GACCTGCAACGACGATGTCTCGAGAAGGGAACGACGCCCGAGACGCCACCATCGTCCGCCATGAC--CGCAGTCAGGCAC
GATTTTCACCGGAGGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCTCTCCACGAAGACGAACGCCG
CCGTCGGTAAACCGGCGGAGATCCGACATCTCCTCACTAGTCCCTCGACGCGCCGCCGGTCGGCGGAAGGCCATCCCACG
GCGGATCCAATCGGG--GCGTTGGATCCACAGTCGCTGCCGCCACCATCTCCGCGCAGATCAGGTACCCCGTCGGATGGG
GCGCTGCCACTACCGGCATCCAT-TCAGGGCCGCCGCTCCGCCGACTTATGGTGCTTCGGCCACCGCCGCATGGCAAGGG
ATCGCCGCCCCAGCCACCGCCTTCGGATCTCACGAGAAGGGCCGCCCCTGCCGCCTCAGACGAGATCACGCCGCATCCAC
CCGCCCAGGTGCCTTCAGCGCCGGG-CCCGCCGCCACCACGGCCCTCGCCGGCG---GCAGCGGCGACAGAGGGAGGCGC
GAGAGGAGGCCTGCGGCGCTAGGGTTCGG-G-G-GGCCCTAGCGTCGCCTAGGGGGAGGCGACGCGAGGGGGAGG-----
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>chr1B_29
----------------------------CCCACACTTGCTCCAAAACGATGCCCCC------AGGAGGGAGAACGACATC
GAAA-TGTCGCTATCGTCCGATCCGGTAGACCCAGATCTAGGGTTTC-CC-CTCGGAACCTTCCGATCAG--GTTGACAT
GACCTGCAAAGACGATGCCTCGAGAAGGAAACGACGTCTGAGATGCCGCCATCGTCCGCCATGAC--CGCAGTCAGGCAC
CATTTTCATCGGAGGCCACGTCGTCCCGATCTCGCGGTTGGCTGGAACCGAGCGGAGTCTCTCCACGAAGACGAACGCCG
CCGTCCGTAAACCGGCGGAGATCCGACATCTCCTCA-TCGTGCCTCCTTGCGCCGTCGGTCGGCGGAAGGCCACCCCGCG
GCGGATCCAATCGGG--GTGTTGGATCCGCAGTCCCCGCCACCACCATCTCCGCGAAAATTAGGTACCCCGTCAAATGGG
GCGCTGCCACCACCGCCGTCCAT-TCAAGGCCGCCGCTCCACCGGCTCATGGCGCTTTGGCCACCGCCGCACGGCAAGGG
ATCGCCGCCCCAGCCGCCACCTTCAGACCTCACGAGAAGGGCCGCCCCTGCCGCCTCAGATGAGATCTCGCCGCATCCAC
CCGCCCAGGTGCCTTCGGCGTCGGG-CTCGCTGCCACCGCGGCCCTCGCCGCCGCCGGCGGCGGCGGCAGAGGGAGGCGC
GAGAGGAAGCCTGCGGCGCTAAGGTTC-GGG-G-GGCCCTGGCGTCGCCTAGGGGGAGGCGACGCGAGGGGGAGGA----
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>chr2B_761
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-----------------------------------------------------------------------GAGGAATAA
TGAAAGCAATCGTACTAATATAAATCTCTGAGGAGTCTCAGGCAGTTGGAGAAGGTT-ACGGCCGGCACACCTAACTCGA
ACAACATGCCT----GAATCGTAGTGATATTTGAATAGGAAACTA---CGTGTATCAGAGAAGGAGCAAGGG--------
---ATCATTACGATACCAAACAACGATCCTCCTTGTATAAATTCCGTGGCTAACCGAATAGAGAATTAGAGATCATTGGA
ACATCTGTTGGCGACGTTCTCGTTGTCATATATGGCAGAGAACCCGGCTGCTGCTGC---AGTTAATCACGGCGAAGGCC
TCCGGCTACCGGAGACGTCGTCGATATGCGTCACGGAGAGCGCCGCACACAACTTCGAGGTGACCAATTATGCGCTGCTC
CAGGGCCTGGGCGTCGGGAAGTACATCACCTCAAGCACATTCAGGGTCGGCGGCTACGATTGGAATATCATGTTCTACCC
GGACGGAAGCAGGAAGGACTTTGCCGGCAACGCGTCAGCCTTTTTGTGTTGTCTCAGTAAGGGGAAGGACGAGGTGAGGA
CAAAATTCACCTTAACCCTGCTGGACGGTCAAGGCAATGCACAGGAAATCAACAAGGATTACGTAGCAGCGCACATCTTT
TCTCTGGAAGCTCCGAACATGGGCTTCCCGAAATTCGCAGAGAAATCCAAGCTGAAATCCTCATCTCACCTCCTGACTAT
ACGGTGCGTTCTCACCGTGATCAAGGAACCGCCCACGGAGTGCCGAAAAAATCTCATCGTAGTTCCACCGTCAAAGCTGC
CCGGCAACATCGAGCGCACCCTCAAGGACGGGAAGGGCGCAGACGTCACGCTGCTCGTGGGCGGCAGGGAGTTCAGTGCG
CACAGGTTCATGCTAGCCGCACAGTCGCCGGTTTTCGACGCACAGCTCTTTGGCCCGATGATGGACGAGGACACGCGGTG
CATAGAGGTTGTCGACATGGACCCGCCCATCTTTGAGATGCTTCTTCACTACATCTACATGGATTCGCTGCCCCCGTGTG
ACGAGAAAGGTTGCGATGCTGCTTCCATGCAGCACTTGCTAGTCGCGGCAGATCGGTACGGGCTGGATAGGCTCAAGGTG
ATGTGTGAAGAGGAGCTGTCGAAAAGCATCAACGTCCACACCGTCACGAGTACATTGGCGGTTGCGGATCAGCACTTCTG
CGAGGGGCTCAAGAATGCTTGTGAGGAGTTTCTTTCAGCGCCGGGAATAGGGGCCATTGTGTCTTTAAGAAACGGGTTCA
AACGCATGATGGCAAAGCTAGAATCCAGGGGCAAGGAGGAGGCATCTGGCACGCTGACCAAGTAATCTAGTACTAAGACC
CAAAAATAATCATGGAGTAGATTTTTTATTCTTTTGGGAACATAAATCATAAATATTTGTGAAGCAATGTTTTGGATCCA
TGTGTTTCTTGAAAAAATAAACAGTTTTGCTAAGTCTCAGTCGACTGAGACTTGGTTATGTCTCAGTCCATGCTATATTC
GTTTGATCTTGCGTGATGATTCGTGCAGAATTTTCTTTTTAGCTTTTTCTTTTTTCTACTTATATACTAGTATGTAATTT
GATTGAGACTTTATTAAATCTTAGTCGACTCCTAGCTACACCCAAAAATAAAAGCAATGGTTTCTTGAAACTCTAATTTA
GTGCAATCCGTGAAGCCCTGCCATGGAATTTGTGTATTTTTGTAGGAAAATAAGATAACCTGTGGTATTTTGAAAGCTGG
CGCTAATAGTAGTGTTTTTATTTTTACCTTTTGCTATTTAAGGCTCCTTTGATACAAAGGAATTGCATACGATTTTTGGA
GGATTAGGATCTTTAAGAATTTTTTTCCTAGGAC-----TTTGATTCATAAGATTGAAATTCTTAGGAACTTTTCTATAA
GATTCATTTTTACAACATTTTGGAGGAAAATTTACATCGACTCAAACCGCTTTGTTGGATTTCATTGTTTTTCCTATATG
CTATGAAACACTCTTTCATATCCTGCAGAGGGCAAGAGAACATGACACTCTATTCCTCTGTTTTTTGTATTCTTGTATTT
TGATAATCCCGCGAATCAAAGAGGCCCTTACACGGTACTAACCGAGCAAGATGATGGCAATGCCCAAAAGGCTGGAATCG
ACTTTTTTCTTGAGCGAAACACACCCGGACTTTATTAATCGACAGAAAAGTTTACGCAGTCCGGGCTCCAGAAGCCACAC
ATAGCGTCCATGATTTAAATCTAATGAGTTCCTTCCTAAATTATGAGCACGTACATTTGTCTCCAAAAATTCGTGTTTGA
ACATAACTTCAGGCCCCGGCAAAAAA----AACATAACTTCAGGCCCAGATCACATAATATCACATATCTCCTTAATAAT
CATCACATTCCTTATGAGGCTTCCGTCCTGGATACTACATATAC------------------------------------
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>SNPs
-----S---S------------------------------S---------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------S----------S-------SSS--S----------
------------------------------------------------S-------------------------------
--------------S---------------------S----------------S----------SS-----S--S----S
-S-----S-------SS------------------------------------------------------------S--
------S-------S------------------------------S---S------------------------------
-----------S--------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------------------------------S--------S-----------------------------S---------
-----------S-------S--------S-------S-----S--------------S----------------S--S--
--S-S-----SSSSS-----------S--------S---------SSS-----------S-----SSSSSSSSSSSSSSS
SSS-------------S-----------------------------------S-S-------------------------
---S--------------------------------S--------------------SSS--------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-----------S----------S------------------------S--S--------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S------------------------S-------
-----------S--------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------------------------S--------------------------------------------------S---
------------S------------------------------------------------------S------------
--------------S-----S-----------------S----------------S---------S--------------
---S--------------------------------S-SS------------S-------S-------------------
-----S-S-----------S---SS------SS-S-------------S-S--SS---S---------S-----------
S---------SSS-SSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------S--------------------SSSSS---------------------S--------------S--SS
---------------------------------------------------------S----------------------
------------------------------------------------S-----------------S---S---------
------------------------------------------S----------------------------S--------
--------------------------------------------------------------S-----------------
----------------------------------S-------------------------S----S--------------
--------------------------SSSS---------------S--S---S--------------------------S
-----------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_402
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--------------------------------------------------------------GCATAAGGCTACTCCGCA
GT------------------------------------------------------------------------------
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>reverse_2040
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---------------------------------------CCCGGGAATAGGGACCATTG---------------------
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>forward_1201
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-------------------------------------------------------------GACCAATTATGCGCTGCTC
G-------------------------------------------------------------------------------
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>reverse_3530
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---------GGGCTCCAGTGATTCCTGAC---------------------------------------------------
------------------------------
