>input_sequence_61155
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-----------------------------------------ATGAAGGCGCGGCAGTTGGTGAATGCGGTGCA---GAGG
TATGGCAGAGGCGGATTGTATACGGTGAGTCGCATGAAGGCCGAGGAGCAACTCTTCTACGGATCCACGGCGGAAGCACA
AGCAGCAGCAACATCAGCGGCATCCAGGATGGAGGTCATGTCGCGGT------------------------TGCCTGCGC
CCAGGCTCAGATTCGAGTCATACCGCTCAAAGTACAAGAGGCTCGATTTCCTGCCCTTCTATGGAGGAGGCAGAGGCCA-
--CGATAGCAAGCTGCTCTGCCTGGACTCTGCCGGAAGCGCCATCCTCTGCAACGCGGACGGCCGCTCCCTCCAGCCGGT
TCCCAACCTTAACGAACCTAAGGGAGTCAGCCCCGCCTCCTTCTCCATCCCCAGGACCGACGCCATTGACCCCAAGCGCG
CTGAAGCTCTCTACGTTCTCAGCAGATCCGCCCCCAGCCGCAACTCCTTCACCTTCGAGGTCCTCGTCTATGGCGAGAAG
ACTTGGCACTGGGTTGTGCTCCCACCGCCACCGTACGTCAACGACCCACTCTATGACTCCACATTCATCCAGTCCTACAC
GCTGCTCGGTGATGGCTCCACCATCTGCATCTCCTCCCCTGAG------CATAACCCTGTCGGCACCTACTGCTTCGACA
CGGTTAGCCGCAAGTGGGAAAAGGCTGGTCGCTGGGCGCTGCCCTTGTACGGCAGGGCTGAGCATGTCCCTGAGCTTTCC
AACCTCTTGTTCGGCATAGCCGACAAGAGTCCCC---------ACTACTTGTGCGCATTGGACCTCTCCAATCTGGACGG
GGCTCCGAAGGTGCTTAGTGACTGGCCAGATCTCGACCCTCCTCAAGGCTGGGTGCAGATAAGGAGCAGCCTGCTGTACC
TGGGAGCGCGCAAGTTTTGCATAACCAAAATATTTGACATCGGCGACCAAGACACCGAAGAGGTCACGAGTGGCGTCGCG
GCTGTGTTTACTGGGGTGGAGATGATCTGCGGAGCTTCTGGTATGGAGGTGGTGCAGGATGGATCATCCGAACTCCAGAT
GGTCAGGCACAAGTCCTTTGTCAGCTATGATGGCATCGAGTGTGTCCTCTGA----------------------------
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>chr2D_1_TraesCS2D01G522800
GTTTGAGTTTCGAGAAATGTTTAAACTGGGAATATTTTATAAATTTCTGCAATATTTTTAAAAACACGAACATTTTATGA
AAAAGGGTACAAATTTTCGCAAACACGAACATTTTCTGAAAAAATCGAATCAATCTTTAAAAATGCAAACATTATTTAAA
TTTATGAAATAAATTTGGAAACACCAAAAAAATGTTAATTTTTTTTCTAAATGCGAACATTATTGAAATTTTGAACAATG
TTTTAACAGCAAGCAATTTTTGAATTTACCAACAAAATTTGAAAAGAAGAACATTTTTATAATTTTGAACAAAATTTTGT
ATCCGAGTACATTTTTTGTAATTCTGAACAAATTTTGGAAAAAGTAACATATTTTGAAATTGCAAAAAATATTTTTAATT
TTCGAACAAGTTTGAAAAGAAAAAAGCTTGAAATTTAAATGGAAAAAAGGAAAAATTAAAACTGCTCAGGGAACCTTCTA
GAAGTTTCCTAAAACTGGTAAAACCGGACAGAAAGGTTCCGAAAACCGAACGACTGGACCGGCCCAGTAAGCTCGATTTT
ATGCGTTTGCTCGACAACAGCGAGTCTCAAATAGGGATTTCCGAAAGTATCTCAAAAAAAAAATATAGGGATTTCCCAAA
GTATCTCAAAAAGAAGGAAAGGGTAAGACCGCAACAAGACCTAGATTCCGAATCCCACCCCAATCTTCGCCGGCGCCGCC
GCCGCCGACTTCGATTCCGTGGAATTGGCTCTGTCTGCCGCAGGTATTACTCCTTATTGCTCTTCCCCGTTGGACGGTTC
GTCTTTTGTTTCCCAAGATCTTGATTGTGGCTGATCTGTAGGGTATCATTCACCATGAATTTTTCTTCTATTGTTGATTG
TTGGTTTTGAGATGCTATTCCGACTCGCCTTCCGGTATCTAATTCTATTGTAATCCTTTATTTAGGAAGAAGAAAGATCA
ACATTTGGGGTCTCCTTTTTTAGGAGCAGAG-GGAATTAAAATGAAGGCGCGGCAGTTGGTGAATGCGGTGCA---GAGG
TATGGCAGAGGCGGATTGTATACGGTGAGTCGCATGAAGGCCGAGGAGCAACTCTTCTACGGATCCACGGCGGAAGCACA
AGCAGCAGCAACATCAGCGGCATCCAGGATGGAGGTCATGTCGCGGT------------------------TGCCTGCGC
CCAGGCTCAGATTCGAGTCATACCGCTCAAAGTACAAGAGGCTCGATTTCCTGCCCTTCTATGGAGGAGGCAGAGGCCA-
--CGATAGCAAGCTGCTCTGCCTGGACTCTGCCGGAAGCGCCATCCTCTGCAACGCGGACGGCCGCTCCCTCCAGCCGGT
TCCCAACCTTAACGAACCTAAGGGAGTCAGCCCCGCCTCCTTCTCCATCCCCAGGACCGACGCCATTGACCCCAAGCGCG
CTGAAGCTCTCTACGTTCTCAGCAGATCCGCCCCCAGCCGCAACTCCTTCACCTTCGAGGTCCTCGTCTATGGCGAGAAG
ACTTGGCACTGGGTTGTGCTCCCACCGCCACCGTACGTCAACGACCCACTCTATGACTCCACATTCATCCAGTCCTACAC
GCTGCTCGGTGATGGCTCCACCATCTGCATCTCCTCCCCTGAG------CATAACCCTGTCGGCACCTACTGCTTCGACA
CGGTTAGCCGCAAGTGGGAAAAGGCTGGTCGCTGGGCGCTGCCCTTGTACGGCAGGGCTGAGCATGTCCCTGAGCTTTCC
AACCTCTTGTTCGGCATAGCCGACAAGAGTCCCC---------ACTACTTGTGCGCATTGGACCTCTCCAATCTGGACGG
GGCTCCGAAGGTGCTTAGTGACTGGCCAGATCTCGACCCTCCTCAAGGCTGGGTGCAGATAAGGAGCAGCCTGCTGTACC
TGGGAGCGCGCAAGTTTTGCATAACCAAAATATTTGACATCGGCGACCAAGACACCGAAGAGGTCACGAGTGGCGTCGCG
GCTGTGTTTACTGGGGTGGAGATGATCTGCGGAGCTTCTGGTATGGAGGTGGTGCAGGATGGATCATCCGAACTCCAGAT
GGTCAGGCACAAGTCCTTTGTCAGCTATGATGGCATCGAGTGTGTCCTCTGAGTTTTTTTTTTTTTTTTTTTTTGACATC
AGTGTGTCCTCTGAGTTACTAGTAGGGAAGTGAATGGAAAGGAGAGCAAATGACTTGTTGGCATTTCTTAAAGGACTGCC
GAGTGGTGGTTTTCATTACAACTGGATCTCTATGTTATCAGGTGAATGAACTGTAATAGTTGAATGATGGTTGTATATTG
TGGACAAGCCCTTTGCTCGCCCTGCCTCGTGCTTGAAGAGTGTAATCCCCGTGCTCTATGCGATTGAAACTCAGTCATTA
ATTTGATATACATATTTTTAGTAGCTCAAAGTCTCTGTCGACGCTCTCGCCCTCTCATCCAGATTGAAGACTCACCGCCC
TCGCCGTCGACGCTAGGACTGCGTGGCGACCATGCCGTTATGGAATGAGGCAGAGCGCCCACCCCAACTATGATGATTCG
ATGAGGAGGAAGGTGTATCCTATTTTCATGGCTCGGGTTAGGGTAGGGTTTCACTGATTTGAGGATTTTCTGTTTGAGTT
GTATTAGCTCAATTTGGTTGGTGTTTTAGATGCCATACATGATTTCCTACAAGCATTTGAGTGGGTTAGCTTTACGATTA
CTCTACACAAGAGTCCTAATCAGCTACGTCGGTGGAGAGGGGGTCCTCTACGGAACCGTCTTCCTTGTCTTAAACGACAA
GGTTTCTCAAATCTTCCTTCTATAAGGCACATGGGTTGGCATGATGGCCCAGGGCAGAAACCGATCTGGGGGCCTCCGGA
CGGCCTCCTTGGGCCGACAACAAGAGAGGTGAGACACTCTTGAGTCGTAACACCATCAAAGAAGAAGAGAACTACTCGCA
ACAAACCACGGAACGGGGGAGAAATGGGTCGGCCCAGTAATGACGCAACACGAAAACCTTGAGGCGGGACGGAGCTCTGT
CTCGCAATAAGAGAGACATAGCCCTCGCGCTGCACACTGCCTTGAGCCTTGGGTGCATCCGCCAGCACATGATCGCCTAT
ACAACCCTTGAG
>chr2B_963
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--ATTTGTGATCTCCGTTTTGTAGGAGTGGGAGGAATTAAAATGAAGGCACGGCAGTTCCTGAATTTGGTGATGCGGAGG
TCCGGCAGTGGCAGCTCGAACACGGTGAGCCGCATCAAGCCCGGGGAGCATCTCTTCTACCCATCCACGGCGGAAGCACG
G---GCGGCAGCAGCAGCGGAACCCAAGGACGATAATACGACGCCGCCATCACCAGCGGTTGCGCCGAAGATGCCACCGC
CCAGGCTCAAATTCCAAGCGTACCGCGTAGACGGCCCAAGGCTCGATTTTTTGCCCTTCTACGGACGAGGCAGCGGCGTC
GGCGATGGTAAGATCCTCTCCATGGACTCGGCGGGCAACACCGTGCTCTGCGACGCCGGCAGCTGCTCCGTCCAGCCCGT
TGCCGGCCTCAACGAACCCAAGGGTGACAGCCCCGTCTCCTTCTCCATCACTCGCGCGGAAACGGCAACCTCCCGTC---
---AAGCCCTGTACGTCATGGACAGGTTCCCCGCTCCCCACAATGCTTTCAACTTCGAAGCCCTCATCTACGGCAAGAAG
TGCTGGGAGTGGCACCGGCTCCCGCCGCCGCCCTATGTCAACGACGCAGCCTATGAGTGCACGGCCATCCAGTCCTACAT
GCTGCTGGGTGATGGCTCGACCATCTGCGTGTCCTCCGCTGGG------CTC------ATCGGCACCTACTGCTTCGACA
CGGTTAGCTGCGCCTGGGAAAAGGCTGGCCGCTGGACGCTGCCGTTCCATGGACGGGCTGAGCATGTCCCTGAGCTTCGC
GACCTCTGGTTCGGCATGACCGGAAACAACCCAAACAACTTCAACAACTTGTGCGCACTGGACCTCTCCAACTTTGGCAG
GGCTCCCAAGTTGCTACATGACTGGCAGGTCCTCGACACGCCTCATGGATGGGTGCAGACAAGGGGTAGCCTGCTGTACC
TTGGAGCCGGCAGGTTTTGCATCTTCGGAAAATTTGACACCGGGGAGCAAGA----------------------------
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>chr2D_1265
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---------------CTCTGCGTGGACGCCGCTGGCCACACCGTCCTCTGTGATGCTCACGGCCTCTCTGTCCAGCCGGT
TCCCTGCCTCAACGAACCCAAGGTTGACAGCCCTGTTTCTTTCTCCATCACCCGCACCAGCCCGGAAAATCCCAATCGCG
CGGAAGCTCTTTACGTTCTCGACAGATTTGTCACGAACCGCAACTCCTTCAACTTCGAGGTACTCATGTATGGCAAGAAG
ACTTGGGAGTGGGTTCGGCTTCCACCGCCGCCCTATATCAACAACCCGGCCTATGACTCCACATCCATCCAGTCCTACAC
TCTCCTGGGTGATGGCTCCACCATCTGCATCTCCTCCCCTCGGCAGAGTCTC------GTCGGCACCTACTGCTTCGACA
CGATTAGCTGTAAGTGGGAAAAGGCTGGCAGCTGGGCGCTGCCCTTGTATGGCCGGGCTGAGCATGTTCCTGAGCTTGGT
AACCTCTGGTTTGGCATGTCCACCGACAACCCCC---------ACAACTTTTGTGCATTGGACCTCTCCAACCTTGACCA
GGCTCCCAAGTTGCTTCAGGACTGGCAAGACCTCGACCCTCCTGAGGATTGGGTCCAGATGAGGTGCAGCCTGCTGTACC
TGGGCGCGGGCAGGTTTTGCATAACCAAATTCTTCAACATCGGGGACTCAGACATAGAGGACAACGCAAC------CGCG
GCTGTGCTCACCGGAGTGGAGGTGTTGTGTGGAGTTTCTGGTGGGGAGGTGGTGCACAGAGGGTCATCGGAACTCCAGAT
GATCAAGCACAAGTCATTTATCAGCTATGATGGCATCCGGTGTGTCCTCTGA----------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-----S-S-----S----SSS-SSSS-S-------------------S--------SS-----SS----SS-------
-SS-----S---S-S-S-S-S--------S-----S---S---S------S---------SS-----------------S
SSSS--S---S--S------S-S---S-SSS--SSSS-S-S---S-S----------------------------SS---
---------S----S-SS-S------SS-S-SSS-SSS-----------SS----------S---S-------S---SS-
------S-S---S-S------S-------S--S--S-S-S--S--------S----S------------S----------
----SS---S--------S-----S-S--------S-------------S--S-S------S-SSSSS-------S----
-S--------S---------SS-----S----S-S-S--------------S-------------S--------S-----
------S-S------SS------------S--S--S------------SS--------------S---------------
------S----------------------------------S--------SSSSSSSS----------------------
--------S-------------------S--------------------S---S-----------------------SS-
-------S---------SS---S---S-SS---------------S-------------------------S--S---S-
------S---S-----SS--------S---S--------------S--S---------------S---------------
--------S---S------------------------------S----------SS--S--SSS-S-S-SSSSSSS----
------S-S--S--S------S--S-S--S----S-------SS------------SSSS--S-----S-----------
-S---S---------S---S-----------------SS-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_523
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-----------------------CCGGACAGAAAGGTTCCGAA-------------------------------------
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>reverse_2015
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--------------GGTGGAGATGATCTGCGGAG----------------------------------------------
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>forward_756
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----------------CCGTGGAATTGGCTCTGTCT--------------------------------------------
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>reverse_2586
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-------------------------TCATGGCTCGGGTTAGGGTA-----------------------------------
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