CLUSTAL X (1.81) multiple sequence alignment input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TACTCCCTGCGAAGAGTCCACGGTGGTTCGTTGCACTCTCCCGCAGCCTC chr5B_1 TACTCCCTGACAATAGTATACTGCGGTTCGATGCTCTCTCCCGCAACCTC chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 GTGCT--------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------SS--S---SS--S-S------S---S----------S---- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TGGTACCACTTGTAGAAATGGCGGGATGCAACAAAGTAGGAGTGGGTGCC chr5B_1 TGATACCACCTGTAGGAATGGTGGGATGCAATAAAGTAGGAGTGGGTGCC chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --S------S-----S-----S---------S------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CCCAAACCCGCCACGAAGCATCCCGATGACCATGCCGTGGGCGTGAAGAA chr5B_1 CCTAAACAAGCCATGGAACATCCCGATGACCATGCCATTGGCGTCGAGAA chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --S----SS----S-S-S------------------S-S-----SS---- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GAGGCGCGCCAGACATCCCGGCCTGGTTGTCAATGTAGGCCTCAAGGAGG chr5B_1 GAGGTGAGCCGGACA----------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----S-S---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -----------------------------------------------AGG reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GTCATCCTGTAGCCCATCTCTTTAGCGCTCATGATGTCGATGTCCCGGGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 GTCATCCTGTAGCCCAT--------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AGAGCTGCTCAACCCCGTCACCTTGTTCCATGACACCATCATTCACCGGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TCGCGTGTCTTGGTATGCTCCGAGCCACCTGGAGGATCGGGTGAGGTCTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GTGTAGACGCCGTCGCTGTCGTGGAAGTTCTCGAGGGACTCGACCTCAAC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 ------------------------------------------------AC reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AGGGAGCAGAAGCATGTCCGGGGAAGAGTCCCATGCCGTTATGTTTGCAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 AGGGAGCAGAAGCATGTC-------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TCACGTACTTCCTTGCCTCTTCGGCCTGGCCGGCGAGCCAGCGAGCTTCC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TCGTGGTGGTAACAGACGAGAGAGGCGCTAAACAAGCACACTTTATCCGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 ATCAGACCTGTTGTATATATTCTGGAGGTCGTGAGCAGTCATGATGACAC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GCCGTCCATCGGCCATGGAATCGTGAACGAAGCCAAGGCAGGTGCATGGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TTATATGCAGCTTCCTTCTCTTCCTTTTGTCTTCGATGGTTTGTACTCGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TCGGCCAGCTCCTGGATCCTTTTGAACCTGTGGGGCTTGGGGGCCAACTT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GACGTAAAAGAACGAATCCTTGGCTGTGTTGAACATATCCGTCCAATCCA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CCACCTGTTGAACGTTGAGGCATCCAATCTTTACTGCAGTGCAGGGACAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 ATTGGCTTCAAGAGGGGAGGGTTGGCGGCGGCGCAGGCCCGTGCGACGGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GCCGGATGTTGGCGCCTTTCCTGCGATTTTTTTTGTACACAAAAAATTCG chr5B_1 -------------------------------------------------- chr5B_925 ------------------------GATTTTTTTTGTACACAAAAAATTCG chr5B_927 --------------------------TTTTTTTTGTACACAAAAAATTCG chr5B_934 ---------------------------------TGTACACAAAAAATTCG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSS-------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CAGGAAACACCCGTGTACGGCCCGA-CC--CGACCCCGACCCCAACCACG chr5B_1 -------------------------------------------------- chr5B_925 CAGGAAACACCCGTGTACGGCCCGACCC--CGGTCCCGACCCCAACCACG chr5B_927 CAGGAAACACCTGTGTACGGCCCGACCC--CGGCCCCGACCCCAACCACG chr5B_934 CAGGAAACCCCCGTGTGTGTACGGCCAGATCGACCCCAACCCCAGCGGCG chr5A_973 ----------------------CGG-CC--CGACCCCGAACCCAACCACG chr5A_986 --------------------------------------ACCCCAACGGCG chr5A_986 --------------------------------------ACCCCAACGGCG chr5A_986 --------------------------------------ACCCCAACGGCG chr5A_986 --------------------------------------ACCCCAACGGCG chr3B_988 ----------------------------------------CCCAACCACG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ---ACGACACA-TCGGCAGCAGCGGCGCGATTGCAAGAGGGCC-G----G chr5D_1_TraesCS5D01G005700 AACACGACACA-TCGGCAGCAGCGGCGCGATTGCAAGAGGGCC-G----G chr5B_1 -------------------------------------------------- chr5B_925 AACACGGCACAGTCGGTAGCGGCGGCGCGATGGCAAGAGGGGTTG----G chr5B_927 AACACGGCACAGTCGGTAGCGGCGGCGCGATGGCAAGAGGGTC-G----G chr5B_934 AGCACGGCACAGTCGGTAGCGGCGGCGCGATTGCAAGAGGGTC-G----G chr5A_973 AACACGAAGCAGTCGGCAGCAGCGGGGCGATTGCAAGAGGGTC-GACGGG chr5A_986 AACACGACACAATCGGTAGCAGCGGCGCCATTGCAAGAGGGTC-G----G chr5A_986 AACACGACACAGTCGGTAGCAGCGGCGCGATTGCAAGAGGGTC-G----G chr5A_986 AACACGACACAGTCGGTAGCAGCGGCGCGATTGCAAGAGGGTC-G----G chr5A_986 AACACGACACAGTCGGTAGCAGCGGCGCCATTGCAAGAGGGTC-G----G chr3B_988 AACACGACACAGTCGGTAGCGGCGGCGCGATTGCAAGAGGGTC-G----G chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -----------------------------------------S-------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ----CGGTTGATTCCCATCGATCGGGGAAAGAAGATGGGTGCGGATGTGG chr5D_1_TraesCS5D01G005700 ----CGGTTGATTCCCATCGATCGGGGAAAGAAGATGGGTGCGGATGTGG chr5B_1 -------------------------------------------------- chr5B_925 TCGACGGTTGATTCCCATCGATCGGAGGAAGAAGATGGGTGCGGGTGTGG chr5B_927 TCGACGGTTGATTCCCATCGATCGGAGGAAGAAGATGGGTGCGGGTGTGG chr5B_934 TCGACGGTTGATTCCCATCTATCGGAGGAAGAAGATGGGTGCGGGTGTGG chr5A_973 TCGACGGTTGATTCCCATCGATCGGAGAAAGAAGATGGGCGCGGGTGTGG chr5A_986 TCGACGGTGGATTCCCATCGATCCGAGAAATAAGATGGGCGCGGGTGCGG chr5A_986 TCGACGGTGGATTCCCATCGATCCGAGAAATAAGATGGGCGCGGGTGCGG chr5A_986 TCGACGGTGGATTCCCATCGATCCGAGAAATAAGATGGGCGCGGGTGCGG chr5A_986 TCGACGGTGGATTCCCATCGATCCGAGAAATAAGATGGGCGCGGGTGCGG chr3B_988 TCGACGGTTGATTCCCATCGATCGGAGAAAGATGATGGGTGCGGTTACGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------S------------------S----- forward_217 -------------------------------------------------- reverse_1076 -------------------------GGAAAGAAGATGGGTGCGGA----- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------GGAAAGAAGATGGGTGCGGA----- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGAGATCCAGCAACAAAAGGACCATGGCCGCCGATCCGACCAGCCGAGAC chr5D_1_TraesCS5D01G005700 AGAGATCCAGCAACAAAAGGACCATGGCCGCCGATCCGACCAGCCGAGAC chr5B_1 -------------------------------------------------- chr5B_925 AGAGATCCAACAACAAAAGAACCATGGCGGCCGATCCGATCAGCCGAGTC chr5B_927 AGAGATCCAACAACAAAAGAACCATGGCGGCCGATCCGATCAGTCGAGTC chr5B_934 AGAGATCCAGCAACAAAAGGGCCATGGCGGCCGATCCGACCAGCGGAGAC chr5A_973 AGAGATCCAACAACAAAAGAACCATGGCGGCCGATCCGACCAGCCGAGAC chr5A_986 AGAGATCCAGCAACAAAAGAACCATGGCGGCCGATCCGACCAGCCGAGAC chr5A_986 AGAGATCCAGCAACAAAAGAACCATGGCGGCCGATCCGACCAGCCGAGAC chr5A_986 AGAGATCCAGCAACAAAAGAACCATGGCGGCCGATCCGACCAGCCGAGAC chr5A_986 AGAGATCCAGCAACAAAAGAACCATGGCGGCCGATCCGACCAGCCGAGAC chr3B_988 AGAGATCCAACAACAAAAGAACCATGGCGGCCGATCCGATCAGTCGAGAC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------------------------S--------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 ---------GCAACAAAAGGACCATGGCC--------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GATCCCTTGGCCAAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5D_1_TraesCS5D01G005700 GATCCCTTGGCCAAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5B_1 -------------------------------------------------- chr5B_925 GATCCCTTGGC---GAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5B_927 GATCCCTTGGC---GAAGAAGAAGATGGTGGTGGATCTGGGGAGGGACAG chr5B_934 GATCCCTTGGCCAAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5A_973 GATCCCTTGCCGGAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5A_986 GATCCCTTGCCGGAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5A_986 GATCCCTTGCCGGAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5A_986 GATCCCTTGCCGGAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5A_986 GATCCCTTGCCGGAGAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr3B_988 GACCCCTTGGC---CAAGAAGAAGAAGGTGGTGGATCTGGGGAGCGACAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CGACGAGGACTTGCCTGATCCGTCACAGTGGGCGGGGGTTAATCCCGATT chr5D_1_TraesCS5D01G005700 CGACGAGGACTTGCCTGATCCGTCACAGTGGGCGGGGGTTAATCCCGATT chr5B_1 -------------------------------------------------- chr5B_925 CGATGAGGACTTGCCTAATCCGTCACAATGGGCGGGTGTTAATCCCGATT chr5B_927 CGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGTGTTAATCCCGATT chr5B_934 CGACGAGGACTTGCCCAATCCGTCACAGTGGGCAGGGGTTAATCCCGATT chr5A_973 TGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGGGTTAATCCCGATT chr5A_986 TGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGGGTTAATCCCGATT chr5A_986 TGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGGGTTAATCCCGATT chr5A_986 TGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGGGTTAATCCCGATT chr5A_986 TGACGAGGACTTGCCTAATCCGTCACAATGGGCGGGGGTTAATCCCGATT chr3B_988 CGACGAGGACTTGCCCAATCCGTCACAGTGGGCGGGGGTTAACCCTGATT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------------S--------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCCAGACTCGACGAA chr5D_1_TraesCS5D01G005700 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCCAGACTCGACGAA chr5B_1 -------------------------------------------------- chr5B_925 CCTTCAGCGATGACTACTTGGCCAAGATGG-AAAGGCCAGACTCGACGAA chr5B_927 CCTTCAGCGATGACTACTTGGCCATGATGGAAAAGGCCAGACTCGACGAA chr5B_934 CCTTCACCGATGACTACTTGGCCAAGATGGAAAAGGCCAGACTCGACGAA chr5A_973 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCTAGTCTCGACGAA chr5A_986 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCTAGACTCGACGAA chr5A_986 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCTAGACTCGACGAA chr5A_986 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCTAGACTCGACGAA chr5A_986 CCTTCGGCGATGACTACTTGGCCAAGATGGAAAAGGCTAGACTCGACGAA chr3B_988 CCTTCAGCGATGACTACTTGGCCAAGATGGAAAAGGCCAGACTCGACGAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GAATCAGGTATGAATAT------GATCCCGCGATTCCCGGCCAACATCCA chr5D_1_TraesCS5D01G005700 GAATCAGGTATGAATAT------GATCCCGCGATTCCCGGCCAACATCCA chr5B_1 -------------------------------------------------- chr5B_925 GAATCAGGTATGAATATATATATGATCGCGCGATTCCCGGACACCATCCA chr5B_927 GAATCAGGTATGAATATATATATGATCGCGCGATTCCCGGACACCATCCA chr5B_934 GAATCAGGTATGAATATATAT--GATCGCGCGACTCCCGGACACCATCCA chr5A_973 GAATCAGGTATGAATAT------GATCGCACGATTCCCGACCACCATCCA chr5A_986 GAATCAGGTATGAATAT------GATCGCACGATTCCCGACCACCATCCA chr5A_986 GAATCAGGTATGAATAT------GATCGCACGATTCCCGACCACCATCCA chr5A_986 GAATCAGGTATGAATAT------GATCGCACGATTCCCGACCACCATCCA chr5A_986 GAATCAGGTATGAATAT------GATCGCACGATTCCCGACCACCATCCA chr3B_988 GAATCAGGTATGAATAT------GATAGCGCGATCCCCGACCAACATCGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------------------------S---------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATTTTTCAGTTTACTAGTAATGGCGCAACTA---------------GCCT chr5D_1_TraesCS5D01G005700 ATTTTTCAGTTTACTAGTAATGGCGCAACTA---------------GCCT chr5B_1 -------------------------------------------------- chr5B_925 ATGTTTCATCAGTTTC---------------------------------- chr5B_927 ATGTTTCATCAGTTTC---------------------------------- chr5B_934 ATTTTTCATCAGTTT------------ACTAGTAGTGGCGCAACTAGCCT chr5A_973 ATTTGTCATCAGTTT------------ACTA---------------CTCT chr5A_986 ATTTGTCATCAGTTT------------ACTA---------------CTCT chr5A_986 ATTTGTCATCAGTTT------------ACTA---------------CTCT chr5A_986 ATTTGTCATCAGTTT------------ACTA---------------CTCT chr5A_986 ATTTGTCATCAGTTT------------ACTA---------------CTCT chr3B_988 TTTTTTCAGTTTACTAGTAATGGCGCAACTA---------------GCCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGCGTTGGCGCCCGCTAGCTGCCGGCGGGGTT--------GCAGGCGTCG chr5D_1_TraesCS5D01G005700 TGCGTTGGCGCCCGCTAGCTGCCGGCGGGGTT--------GCAGGCGTCG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGCGTTGGCGCCCGCTAGCTGCCGGCGGGGTT--------GCAGGCGTCG chr5A_973 AGCGCCA------------------------------------------- chr5A_986 AGCGTTGGCGCCCGCTAGCTGGCGGCGGGGTT--------GCAGGCGTCG chr5A_986 AGCGTTGGCGCCCGCTAGCTGGCGGCGGGGTT--------GCAGGCGTCG chr5A_986 AGCGTTGGCGCCCCCTAGCTGGCGGCGGGGTT--------GCAGGCATCG chr5A_986 AGCGTTGGCGCCCGCTAGCTGGCGGCGGGGTT--------GCAGGCGTCG chr3B_988 TGCGTTGGCGCCCGCTAGCTGCCGGCGGGGTTGCAGCCTTGCAGGCGTCG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CGCCGCGAGCTCTGATGCGGCGTGGCTCCCCGGCGGCCTCTGGGAGCAGA chr5D_1_TraesCS5D01G005700 CGCCGCGAGCTCTGATGCGGCGTGGCTCCCCGGCGGCCTCTGGGAGCAGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CGCCGCGAGCCCTGATGCGGCGTGGCTCCCTGGCGGCCTTTGGGAGCGGA chr5A_973 -------------------------------------------------- chr5A_986 CGCCACGAGCTCTGGTGCGGCGTGGCTCCCCGGCGGCGTCTGGAAGCGGA chr5A_986 CGCCGCGAGCTCTGGTGCGGCGTGGCTCCCCGGCGGCGTCTGGAAGCGGA chr5A_986 CGCCGCGAGCTCTGGTGCGGCGTGGCTCCCCGGCGGCATCTGGAAGCGGA chr5A_986 CGCCACGAGCTCTGGTGCGGCGTGGCTCCCCGGCGGCGTCTGGAAGCGGA chr3B_988 CGCCGCGAGCTCTGATGCGGCGTGGCTCCCTGGCGGCCTCTGGGAGCGGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -----------------------------------------------S-- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCTGC------------------------CGTGGGGAAGGGATGGCTTGT chr5D_1_TraesCS5D01G005700 TCTGC------------------------CGTGGGGAAGGGATGGCTTGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TCC----GCCGTG-------------------------GGGATGGCTCGT chr5A_973 ---------------------------------GGGAAGGGATGGCTTGT chr5A_986 TTC----GGGGCTGCCCTTGGGGATCTGGCGTGGGGAAGGGATGGCTTGT chr5A_986 TTC----GGGGCTGCCCTTGGCGATCTGGTGTGGGGAAGGGATGGCTTGT chr5A_986 TTC----GGGGCTGCCCTTGGGGATCTGGCGTGGGGAAGGGATGGCTTGT chr5A_986 TTC----GGGGCTGCCCTTGGGGATCTGGCGTGGGGAAGGGATGGCTTGT chr3B_988 TTGATCTGCCGTG-------------------------GGGATGGCTTGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --SSS--------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGCGGGAGGCGGGCTGGTGGTGCGTCGTGTTGAGTTCGGGGGTCGCGACG chr5D_1_TraesCS5D01G005700 GGCGGGAGGCGGGCTGGTGGTGCGTCGTGTTGAGTTCGGGGGTCGCGACG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GGCGG----------------GCGTCGTGTTGAGTTTGGGGGTCGCGACG chr5A_973 GGCGGGAGGCGGGCTGGTGGTGCGTGGTGTTGAGGCCGAGGGTCGCGACG chr5A_986 GGCGGGAGGCGGGCTGGTGGTGCGTGGTGTTGAGGCCGGGGGTCGCGACG chr5A_986 GGCGGGAGGCGGGCTGGTGGTGCGTGGTGTTGAGGCCGGGGGTCGCGACG chr5A_986 GGCGGGAGGCGGGCTGGTGGTGCGTGGTGTTGAGGCCGGGGGTCGCGACG chr5A_986 GGCGGGAGGCGGGCTGGTGGTGCGTGGTGTTGAGGCCGGGGGTCGCGACG chr3B_988 GGCGGGAGGCGGGCTGGTGGTGCGTCGTGTTGAGTTCGGGGGTCGCGACG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGGGCGCCGGTGCGGCTGG--GTGTCGGGCCAGTGCGCTGGGAAAGGTGG chr5D_1_TraesCS5D01G005700 AGGGCGCCGGTGCGGCTGG--GTGTCGGGCCAGTGCGCTGGGAAAGGTGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AGGGCGCCGGTGCGGCTGG--GTGTCAGGCCAGTGCGCTGGGAAAGGTGG chr5A_973 AGGGCGCC------------------------------------------ chr5A_986 AGGGCGCC------------------------------------------ chr5A_986 AGGGCGTC------------------------------------------ chr5A_986 AGGGCGCC------------------------------------------ chr5A_986 AGGGCGCC------------------------------------------ chr3B_988 ACGGCGCGGGTGCGGCTGGGTGTGTCGGGCCAGTGCGCTGGGAAAGGTGG chr5D_1560 ---------------------------GGCCAGTGCGCTAGGAAAGGTGG chr5B_1570 -------------------------------------CTGGGAAAGGTGG chr2B_1578 ---------------------------------------------GGTGG chr2D_1578 ---------------------------------------------GGTGG chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CGCTTTGCCTCTTCTCGGCTGCTGGCGGTCTTTGCGCTGGTGTCCTGGAT chr5D_1_TraesCS5D01G005700 CGCTTTGCCTCTTCTCGGCTGCTGGCGGTCTTTGCGCTGGTGTCCTGGAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGCTTTGCCTCTTCTCGGCTGCTGGCGGTCTTTGCGCTGGTGTCCTGGAT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CGCTTTGCCTCTTCTCGGCTGCTGGCGGTCTTTGCGCTGGTGTCCTGGAT chr5D_1560 CTCTTTGCCTCTTCTCGGCTGCTGGCCGTCTTGGCGCTGGTGGCTTGGAT chr5B_1570 CGCTTTGCCTCTTCTTGGCTGCTAGCGGTCTTGGCGCTGGTGGCCTGGAT chr2B_1578 CACACTGCCTCCTCTCGGTTGTAGGCGGTCTTGGCACTGGTGGCCTAGGC chr2D_1578 CGCACTGCCTCCTCTCGTTTATAGGAGGTCTTGACACTGGTGGCCTAGGA chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCGGCGGGCGTGGTGGATTGGATGGCTGCTGGTGGTTCCTGGCGGTTGGT chr5D_1_TraesCS5D01G005700 CCGGCGGGCGTGGTGGATTGGATGGCTGCTGGTGGTTCCTGGCGGTTGGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CCGGCGGGCGTGGTGGATTGGATGGC------------------------ chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CCGGCGGGCGTGGTGGATTGGATGGC------------------------ chr5D_1560 CTAGCCAGCGTAGTGGATTGGTTGGT------------------------ chr5B_1570 CCAGCTGGCGTGGTTGACTGGTTGGC------------------------ chr2B_1578 CCGGCGGGCATGTTGGCTTGGATGCT------------------------ chr2D_1578 CCGGCGGGCATGGTGGCTTGGATGCTTAGGTGTCGG-------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------------------------SSSS--S-SSSSSSSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGTTCGGCT---------------------------------------CT chr5D_1_TraesCS5D01G005700 GGTTCGGCT---------------------------------------CT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 --------T---------------------------------------CT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 --------TGCTGGTGGTTCC------TGGCGGTTGGTGGTTCG-GCTCT chr5D_1560 --------TGGTGGCGGTCCC------TGGTGGTGGATGGTTCG-GCTTC chr5B_1570 --------TGGTGGTGGTTCC------TATTGGTGGGTGGTCCG-GCTTC chr2B_1578 --------TGGTTGTTGATGGTGGTCTTGGCGGTGGGTGGTTTCAGCTCC chr2D_1578 ------------------TGGTGGTCTTGGCGGTGGGTGGTTTCAGCTCC chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SSSSSSSS------------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTGTGCGAGG------------TGGTGGAGGCAGCTGTGCGGCGTGATGT chr5D_1_TraesCS5D01G005700 GTGTGCGAGG------------TGGTGGAGGCAGCTGTGCGGCGTGATGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTGTGCGAGG------------TGGTGGAGGCAGCTGTGCGGCGTGATGC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GTGTGCGAGG------------TGGTGGAGGCAGCTGTGCGGCGTGATGC chr5D_1560 GTGT--------GTGGCGGAGATGGCGGAGGCAGTTGTGTTGCGTGATGC chr5B_1570 GTGTGCGAGGTGTTGGCGGAGATGGTGGAGGCAGCTGTGTTGCGTGATGC chr2B_1578 GTGTGCGAGGTGGTGGCGGAGATGGTGGAGGCAGTTGTGCTGCGTGATGT chr2D_1578 GTGTGCGAGGTGGTGGCAGAGATGGTGGAGGTGGTTGTGCTGCGTGATGC chr4D_1694 -----------------GGAGATGGTGGAGGCTGGTGTGCTGCGTGTTGC chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTCGCCTCCCCTCGGGGTGCCCGGCCTGATTGAGCAGCTCTGCAACTTT- chr5D_1_TraesCS5D01G005700 GTCGCCTCCCCTCGGGGTGCCCGGCCTGATTGAGCAGCTCTGCAACTTT- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GACGCCTCCCCTCGGGGTGGCCGGCCTGATTGAGCAGCTCTGGAACTTT- chr5A_973 ---------------GGTGGCCGGCCTGATTGAGCAGCTCCGAAACTTT- chr5A_986 ---------------GGTGGACGGCCTGATTGAGCAGCTCCGGAACTTT- chr5A_986 ---------------GGTGGCCGGCCTGATTGAGCAGCTCCGGAACTTT- chr5A_986 ---------------GGTGGCCGGCCTGATTGAGCAGCTCCGGAACTTT- chr5A_986 ---------------GGTGGACGGCCTGATTGAGCAGCTCCGGAACTTT- chr3B_988 GTCGCCTCCCCTCGGGGTGGCCGGCCTGATTGAGCAGCTCTGGAACTTT- chr5D_1560 GACACCTCCCGTCGTGGTAGCTGGACTGGTCGAGCAGCTCCGAAACTTT- chr5B_1570 GACACCTCCCGTCGGGGTGGCCGGCCTGATTGAGCATCTCCGTAACTTT- chr2B_1578 GACGCCTCCTATAGTGTTGGTCGACCTGATTGAGCAGCTCCAGAACTTTG chr2D_1578 AACACCTCCTATAGTGTTGGTCGGCCAGATTGAGCAACTCCAGAACTTTG chr4D_1694 GACGTCTCCCGTCGTGGTGGTCGGCCCGAGTGAGCAGCTCCGGAAGTTTG chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------S----------------------S------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GG-GTTTAGGAACTTGGGCTGGGAAAAATCCCTACTTCGTGACGCCGAGG chr5D_1_TraesCS5D01G005700 GG-GTTTAGGAACTTGGGCTGGGAAAAATCCCTACTTCGTGACGCCGAGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GG-GTTTAGGATCTTGGGCTTGGAAAAATCCCTACTTCGTGACGCCG--- chr5A_973 GG-TTTTATGATCTTGGGCTGGGAGAAATCCCTGCTTCATGACGCTGAGG chr5A_986 GG-TTTTATGATCTTGGGCTGGGAGAAATCCCTGCTTCATGACGCTGAGG chr5A_986 GG-TTTTATGATCTTGGGCTGGGAGAAATCCCTGCTTCATGACGCTGAGG chr5A_986 GG-TTTTATGATCTTGGGCTGGGAGAAATCCCTGCTTCATGACACTGAGG chr5A_986 GG-TTTTATGATCTTGGGCTGGGAGAAATCCCTGCTTCATGACGCTGAGG chr3B_988 GG-GTTTAGGATCTTGGGCTGGGCAAAATCCCTACTTCGTGACGCCGAGG chr5D_1560 GG-GTTTCAGATCTTGGGCTGGGAGAAATCCCTGCTTCGCGACGCCGAGG chr5B_1570 GG-GTTTGGGATCTTGGGCTGGGAGAAATCCCTGCTTAGCGACGTCGAGG chr2B_1578 GGTTTTTGTGATCTTGGGCTGGGAGAGATCCCTGCTTCGTGACGCCGAGG chr2D_1578 GGTTTTTGTGATCTTGGGCTGGGAGAGATCCCTGCTTCGCGACACCGAGG chr4D_1694 GG-TTTTGTGATCTTGGGCTGGGAGAAATCCCTGCTTCGCGATGTCGTGG chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -----------S-------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTAGCAT--------------GGCGCCGTCCCCTACCTGGA----GGCAT chr5D_1_TraesCS5D01G005700 CTAGCAT--------------GGCGCCGTCCCCTACCTGGA----GGCAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ----------------------------TCCCCTCCCTGGA----GGCAT chr5A_973 CTAGCAT--------------GGCAACGTCCGTG---------------- chr5A_986 CTAGCAT--------------GGCAACGTCCGTG---------------- chr5A_986 CTAGCAT--------------GGCAACGTCCATG---------------- chr5A_986 CTAGCAT--------------GGCAACGTCCGTG---------------- chr5A_986 CTAGCAT--------------GGCAACGTCCGTG---------------- chr3B_988 CTAGC-ATGGTGACATCCGTGGGCGCCGTCCCCTCCCTGGA----TGCAT chr5D_1560 CTTGCAATGGCGACGTCCGTGGGCGCCGTCCCCTCCCTGGA----GGCAT chr5B_1570 CTAGCAATGGCAACATCTGTGGGCGCCATCCCATCCATGCATGGTGGCAT chr2B_1578 CTAGCAACGACGACGTCCATGGGCGTCGTCCCCTCCTTGGA----GGTGT chr2D_1578 GTAGCAACGGCGACGTCTGTGGACGCCGTCCCCTCCTTGGA----GGCGT chr4D_1694 CTTGCAACGGCGACGTCCATGGACGCCGTCCCCTCCATGGA----GGCGT chr7D_1839 -----------------------CGCCGTCCCGTCCCTGAA----GCTGT chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------------------------------S--------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGCTTTGGCCCGGATCCGACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr5D_1_TraesCS5D01G005700 TGCTTTGGCCCGGATCCGACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr5B_1 --------------------TCCCTGCCTGGGTTTCAATGTAGACCTCAA chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGCTTTGGCCCGGATCCGACTCCCTCCCTCGTGCTTAAGGGAAACCCTTG chr5A_973 -----------------GACTCCCTCCCTCATGCTCAAGGGAAACCCTTG chr5A_986 -----------------GACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr5A_986 -----------------GACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr5A_986 -----------------GACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr5A_986 -----------------GACTCCCTCCCTCGTGCTCAAGGGAAACCCTTG chr3B_988 TGCTTTGGCCTGGATCCAACTCCCTCCATCGTGCTTAAGGGAAACCCTTG chr5D_1560 TGCTTTGGCCCAGATCCGACTCCCTCCCTCGTGCTCAGGGGAAACCCTTG chr5B_1570 TGCTTTAGCTTCGATCTGACTCCCTCCCTCGTGCTTAGGGGAAACCCTTG chr2B_1578 TGCTTTGGCCCCGATTCGACTCCCTCCCTCGTGCTCAGGGGAAACCCTTG chr2D_1578 TGCTTTGGCCCCGGTTCGACTCCCTCCCTCGTGCTCAGGGGAAACCCTTG chr4D_1694 TGCTTTGGCCCCGATCCAACTCCCTTCCTTGTGCTCAGGGGAAACCCTTG chr7D_1839 TGCTTTGGCCCCAATCCGACTCCCTTCCTCATGCTTAGGGGAAACCCTTG chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTTCGGCCTTCGGACCA---GGCGGC---GGCGGCCTGGCATGGTGTCGT chr5D_1_TraesCS5D01G005700 GTTCGGCCTTCGGACCA---GGCGGC---GGCGGCCTGGCATGGTGTCGT chr5B_1 GGAGAGTCATCT-------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTTCGGCCTTCAGACCAGGTGGCGGC---GGCGGCCTGGCATGGCGTCGT chr5A_973 GTTCGGCCTTCGGACCA---GGCGGC---GGCGATCTGGAATTCCGTCGT chr5A_986 GTTCGGCCTTCGGACCA---GGCGGC---GGCGACCTGGAATTCCGTCGT chr5A_986 GTTCGGCCTTCGGACCA---GGCGGC---GGCGACCTGGAATTCCGTCGT chr5A_986 GTTCGGCCTTCGGACCA---GGCGGC---GGCGACCTGGAATTCCGTCGT chr5A_986 GTTCGGCCTTCGGACCA---GGCGGC---GGCGACCTGGAATTCCGTCGT chr3B_988 GTTCGGCCTTCGGACCA---GGAGGC---GGCGGCCTGGCATGGCGTCGT chr5D_1560 GTCCGGCCTCCGGACCA---GGCGGC---GGCGGCAT--CATGGCGTCAT chr5B_1570 TTCCGGCCTTCGGAGCA---TGTGGCAGTGGCGGTATGGCATGGCGTCGT chr2B_1578 GTCCGAGCTCTGGACCA---GGCAGC---TGCAACGT--CATAGCGTCGT chr2D_1578 GTCCGGGCTCATGACCA---GGCGGC---GGCGACGT--CATAGCATCGT chr4D_1694 GTCCGTTCTTTGGACCA---GGCAAC---GGCGGCGC--CATGGCGTCGT chr7D_1839 GTCCGGGCTCTAGACCA---GGCGGC---GGCGGTGT--CATGCCCTCGT chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --------------------------------------------S----- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCCCTCCTTGGAGGCGCCGTCTTGTTGCTTGAGGAGTCCTGGTGGCACAG chr5D_1_TraesCS5D01G005700 TCCCTCCTTGGAGGCGCCGTCTTGTTGCTTGAGGAGTCCTGGTGGCACAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TCCCTCCTTGGAGGCGCTGTCTTGTTGCTCGAGGAGTCCCGGTGGCACAA chr5A_973 TCCCTCCTTGG--------------TGCTCGAGGAGTCCCGGTGGCATGG chr5A_986 TCCCTCCTTGG--------------TGCTCGAGGAGTCCCGGTGGCATGG chr5A_986 TCCCTCCTTGG--------------TGCTCGAGGAGTCCCGGTGGCATGG chr5A_986 TCCCTCCTTGG--------------TGCTCGAGGAGTCCCGGTGGCATGG chr5A_986 TCCCTCCTTGG--------------TGCTCGAGGAGTCCCGGTGGCATGG chr3B_988 TCCCTCCTTGGAGGCGCCGTCTTGTTGCTCGAGGAGTCCCGGTGGCACGG chr5D_1560 TCCTTTCTTGGAGGCGCCGTTCTGTTGCTCGAGGAGTCCCGGCGGCACTG chr5B_1570 TCCCTCCTTGGATGTGCCGTCTTGTTGCTCGGGGAGTACCGGTGGCACGA chr2B_1578 TCCCTCCTTGGAGGCGCCGTCTTGTAGCTCGAGGAGTCCCGATGGCATGG chr2D_1578 TCCCTCCTTGGAGGCGCCGTCTTGTAGCTCGAGGAGTCCCGGTAGCACGG chr4D_1694 TCCCTTCTTGGAGGCGTCGTCTTGTTGCTCGAGGAGTTCCGGTGGCACGG chr7D_1839 TCCCTCCTTGTAGGCGCGGTCCTATAGCTCGAGGAGTACATGTTGCAAGG chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -----------------------------S---------S---------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 ---------------------------------------TGGTGGCACAG forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTCTTATCGGTGTCGGCTACTACTTTGGGCATGGGCCTCCGAGGCGCAG- chr5D_1_TraesCS5D01G005700 CTCTTATCGGTGTCGGCTACTACTTTGGGCATGGGCCTCCGAGGCGCAG- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CTCTTATCGGTGTCGGCTACTACTTTGGGCGTGGGCCTCCGAGGCGCAAT chr5A_973 CTCTTATCGGTGTCGGCTACTACTTTGGGCGTGGGCCTCCGAGGCGCAAT chr5A_986 CTCTTATCGGTGTCGGCTACTACTTTGGGCGTGGTCCTCCGAGGCGCAAT chr5A_986 CTCTTATCGGTGTCGGCTACTACTTTGGGCGTGGGCCTCCGAGGCGCAAT chr5A_986 CTCTTATTGGTGTCGGCTACTACTTTGGGCGTGGTCCTCCGAGGCGCAAT chr5A_986 CTCTTATCGGTGTCGGCTACTACTTTGGGCGTGGGCCTCCGAGGCGCAAT chr3B_988 CCCTTATCGGTGTCGGCTACTACTTTGGGCGTGGGCCTCCGAGGCGCAAT chr5D_1560 CTCTTGTCGGTGTTTGCTACTACTTTGGGCGTGGGTCTTTGGGGCGCAAT chr5B_1570 CTCTTGTTGGTGTCGTCTACTACTTTTTGGGGGTGAGCCTTGGGGGCGAT chr2B_1578 CTCTAGTCAGTGTCGGCTACTACTCTGGGCATGGGCCTCTAGGGCACAAT chr2D_1578 CTCAAGTTAGTGTCGGCTACTACTCTGGGCGTGGTCCTCTGGGGCGCCAT chr4D_1694 CTCACTTCGGTGTCAGCTTCTACTATGGGCATGGGCCTCCTTGGCGCAAT chr7D_1839 CTTAAGTCGGTGTTGGCTACTACTATGGGCGTGGGCCTCCGGTGCGCAAT chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ------------------------------------------------S- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 CTCTTATCG----------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 ------------------------------------------------GT forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ---TGTACACCATCGCCGGAGCTCTCTCGATGATGACTCCTCTAGGTTTG chr5D_1_TraesCS5D01G005700 ---TGTACACCATCGCCGGAGCTCTCTCGATGATGACTCCTCTAGGTTTG chr5B_1 ---TGTAGACCATCTTGTTAGTGCTCACCATGTCGATGTCTCTCAG---- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ----GTACACCATCGCTGGAGCTCTCTCGATGACGACTCCTCTAGGTTTG chr5A_973 TAATGTACACCATCGCCGGAGCTCTCTCGATGATGCCTCTTGTAGGTTTG chr5A_986 TAATGTACACCATCGCCGGAGCTCTCTCGATGATGACTCCTGTAGGTTTG chr5A_986 TAATGTACACCATCACCGGAGCTCTCTCGATGATGACTCCTGTAGGTTTG chr5A_986 TAATGTACACCATTGCCGGAGCTCTCTCGATGATGACTCCTGTAGGTTTG chr5A_986 TAATGTACACCATCGCCGGAGCTCTCTCGATGATGACTCCTGTAGGTTTG chr3B_988 ----GTACACCATCGTCGGAGCTCTCTCGATGACAACTCCTCTAGGTTTG chr5D_1560 ----GTACACCATCATCGGAGCTCTCTCGACGACGCTTCCTCTAGGTCTG chr5B_1570 ----GTACACCATTGCCGAAGCTCTCTCGATGACGACTCCTCTAGGTCTG chr2B_1578 ----GTACACCATCGTCGGCGCCCTCCCGACGACATCATCTTTAGGTCTT chr2D_1578 ----GTACACCATCGTCGGCGCCCTCCCGACAACATCGTCTTTAGGTCTT chr4D_1694 ----GTACACCATCGCGGGCGCTGTCTCGATGATGCCATCTCTAGGTCCG chr7D_1839 ----GTACACCATCGCTGGCGCCCTCTCAACGACGCCGTCTTTAGGTCTA chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 GTACACCATCGCCGGAG--------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCCAGGCCCTGCTGTCTACTT-GCTGACTTCCTCTTGGCGCAGTGGGTGG chr5D_1_TraesCS5D01G005700 CCCAGGCCCTGCTGTCTACTT-GCTGACTTCCTCTTGGCGCAGTGGGTGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CCCAGGCCCTGCCGTCCACTT-GCCGACTTCCTCTTGACGCAGTGGGTGG chr5A_973 CCCAGGCCCTACCGTCCACTT-ACTGACTTCCTCTTGGCGTAGTGGGTGG chr5A_986 CCCAGGCCCTACCGTCCACTT-ACTGACTTCCTCTTGGCGTAGTGGGTGG chr5A_986 CCCAGGCCCTACCGTCCACTTTACTGACTTCCACTTGGCGTAGTGGGTGG chr5A_986 CCCAGGCCCTACCGTCCACTT-ACTGACTTCCTCTTGGCGTAGTGGGTGG chr5A_986 CCCAGGCCCTACCGTCCACTT-ACTGACTTCCTCTTGGCGTAGTGGGTGG chr3B_988 CCCAGGCCCTGCCGTCCACTT-GCTGACTTCCTCTTGACGCGGTAGGTGG chr5D_1560 CCCAGACCCTGCCGTCCACTT-GCTGACTTCCTCTTGGCGCAATGGGTGG chr5B_1570 CCCTGGCCCTGCCGTCTACTT-GCCAACTTCCTCTTGGTGCAATGGGTGG chr2B_1578 CCTAGGCCATGTCGTCCACTT-GTCGACTTCTTCTTGGCGCAAAGGGTGG chr2D_1578 CCTAGGCCTTGTCGTCCACTT-GCCGACTTCTTCTTGGCGCAAAGGGTGG chr4D_1694 CCCAGGCCCTGCCGTCCACCT-ACCGACTTCTTCTT-GCGCAATCGGTGG chr7D_1839 CCCAGGTCATGTCGTCCACTT-GCCAACTTCTTCTTGGCGCGTTGGGTGG chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ------------S------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGT----------------------AGTCTTGGTCTTGTTGTAGAGGTCT chr5D_1_TraesCS5D01G005700 GGT----------------------AGTCTTGGTCTTGTTGTAGAGGTCT chr5B_1 ------------------------------------------AGAGCCCT chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGTCTTGTTGTAGAGGTCT chr5A_973 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGCATGGTTGTAGAGGTCT chr5A_986 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGCATTGTTGTAGAGGTCT chr5A_986 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGCCATTGTTGTAGAGGTCT chr5A_986 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGCATTGTTGTAGAGGTCT chr5A_986 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGCATTGTTGTAGAGGTCT chr3B_988 GGTACGTTGGTCTGTGTTGTCCTTGAGTCTTGGTCTTGTTGTAGAGGTCT chr5D_1560 GGTACGTTGGTCTGTGTTGTCCATGAGTCTTGGTCTTGTTGTAGAGGTCT chr5B_1570 GGTACGTTGGCATGTGTTGTTCTCGAGTCTTGGTCTGGTTGTAGAGGTCT chr2B_1578 GGTAAGTTGGTATGTGTTGTCATCGAGTCTTGGCCTTGTTGTAGAGGTCT chr2D_1578 GATAAGTTGGTCTGTGTTGTCATCGAGTCTTGGTCTTGTTGTAGAGGTCT chr4D_1694 GGTACGTTGGTCTGTGTTGGCTTCAGATTTTGGTCTTGTTGTAGAGGTCT chr7D_1839 GGTGCGTTGGTCTGCTTTGTCCTCGAGTCTTGGTCTTGTTGTAGAGGTCT chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCGACGTCGATCATGACATGCCTGGGTTGCTCTGTGGCTCGTCT----TA chr5D_1_TraesCS5D01G005700 CCGACGTCGATCATGACATGCCTGGGTTGCTCTGTGGCTCGTCT----TA chr5B_1 CCGACGCCATCTTGCACCACCTCGCATG---------------T----CT chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CCGACGTCGATCATGACATGCCTGGGTTGCTCTGTGGCTCGTCT----CA chr5A_973 CTGCCGTCCATCATGACATGCCTAGGT----------------------- chr5A_986 CTGCCGTCCATCATGACATGCCTAGGT----------------------- chr5A_986 CTGACGTCGATCATGACATGCCTAGGT----------------------- chr5A_986 CTGCCGTCCATCATGACATGCCTAGGT----------------------- chr5A_986 CTGCCGTCCATCATGACATGCCTAGGT----------------------- chr3B_988 CCGACGTCGATCATGACATGCCTGGGTTGCTCTGTGGCTCGTCT----CA chr5D_1560 CCGGCGTCAGTTGTGACGCGGCTTGGTTGCTTCGTGGCTTGTCT----CA chr5B_1570 CTGGCGTCGGTCGTGACGCGGCTGGGTAGCTCTGTGGCTTGTCT----CA chr2B_1578 CCAGCGTCGGTTGTGATGTGACTCAGTTGCTATGTGGCTTGCCTCGCTCA chr2D_1578 CCGGCATTGGTTGTGATTCGACTTGGTTGCTATGTGGCTTGCCTCGCTCA chr4D_1694 CCGTTGGCGGTTGTGACGCGGCTTGGTTGCTTTGTGGCTTGCCC----CA chr7D_1839 CCGGCATCGGTTGTGACGTGGCCTGGTTGCTATGTGGCTTGCCT----CA chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ------------------------------------------------S- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -----------------------------GTTGCTCTGTGGCTCGTCTT- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCGCCATTGGCATGAGGTTGGCCTAGGTGGAGCATGTACCGTAGTTCGTG chr5D_1_TraesCS5D01G005700 TCGCCATTGGCATGAGGTTGGCCTAGGTGGAGCATGTACCGTAGTTCGTG chr5B_1 TCG-CATTCTC--------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TCGCCATTGGCATGAGGTTGGCCTAGGTGGAGCATGTACCGTAGTTCGTG chr5A_973 ----------------------------GGAGCATGTATTGTAGTTCCTG chr5A_986 ----------------------------GGAGCATGCATTGTAGTTCCTG chr5A_986 ----------------------------GGAGCATGTATTGTAGTTCCTG chr5A_986 ----------------------------GGAGCATGTATTGTAGTTCCTG chr5A_986 ----------------------------GGAGCATGCATTGTAGTTCCTG chr3B_988 TCACCATTGGCATGAGGTTGGCCTAGGTGGAGCATGTATCGTAGTTCGTG chr5D_1560 TTGTCACTGGCATGAGGTTGGCCTAGGTGGAGCATGTACCCTAGTTCGTA chr5B_1570 TCG-CATTGGCATGAGGTTGGCCTAGGTGTAGCATGTATCATAGTTTGTG chr2B_1578 TTGCCTTTGGCATGAGGTTGACATAGGTGTAGCATGTATCGTAGTTCACG chr2D_1578 TCGCCTTTGGCGTGAGGTTGACCTAGGTGTAGCATGTATCGTAGTTCAAG chr4D_1694 TCGCCATTGGCATGAGGTTGGCGTAGGTGAAGCTAGTATTGTAGTACGCG chr7D_1839 TTGCCTTTGGCATGAGGTTGGCCTAGGTATAGCATGTATCATAGTTAGCG chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGATGGGTGTGTTTGGTGGATGTGGATTCTAATCCTTGTGATTGGCATTG chr5D_1_TraesCS5D01G005700 TGATGGGTGTGTTTGGTGGATGTGGATTCTAATCCTTGTGATTGGCATTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGATGGGTGTGTTTGGTGGATGTGGATTCTAATCCTTGTGATTGGCATTG chr5A_973 TGATGGGTGCGTTTGGTGGATATGGATTCTAATCCTTGTGATTGGCATTG chr5A_986 TGATGGGTGCGTTTGGTGGATATGGATTCTAATCCTTGTGATTGGCATTG chr5A_986 TGATGGGTGCGTTTGGTGGATATGGATTCTAATCCTTGTGATTGGCATTG chr5A_986 TGATGGGTGCGTTTGGTGGATATGGATTCTAATCCTTGTGATTGGCATTG chr5A_986 TGATGGGTGCGTTTGGTGGATATGGATTCTAATCCTTGTGATTGGCATTG chr3B_988 -------------TGATGGGTGTGGATTCTAATCCTTGTGATTGGCAGTG chr5D_1560 TGGTGGGTGCGTTTGGTGGATGTGGACGCTAATCCTTGTGATTGGCATTG chr5B_1570 TGGTGGGTATGTTTGGTGGATGTGGATGCTAATTCTTATGATTGGCGTTG chr2B_1578 TGGTGGGTATGTTCGGTGGATGTGAATGCTAATCCCTGTGATTGGCGTGG chr2D_1578 TGGTGGGTGTGTTCGGTGGATGTGGATGCTAATCCTTGTGATTAGTGTGG chr4D_1694 TGGT--GTGTGTTTGGTGGATGTGGATGCTAATTCTTGTGATTGGCATTG chr7D_1839 TGGTGGGTGTGTG-GGTCGATATGGATGCTAATCTTTGTGATTGGCATGG chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TAA--TGGCCGAAAGGCGT----TAT----ATCCGGCTTCTTTGCCGCTT chr5D_1_TraesCS5D01G005700 TAA--TGGCCGAAAGGCGT----TAT----ATCCGGCTTCTTTGCCGCTT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAA--TGGCCGAAAGGTGT----TGT----ATCCGGCTTCTTTGCCGCTT chr5A_973 TAA--TGGCCGAAAGGCGTTGTATGT----ATCCGGCTTCTTTGCCGCTT chr5A_986 TAA--TGGCCGAAAGGCGT----TGTATGTATCCGGCTTCTTTGCCGCTT chr5A_986 TAA--TGGCCGAAAGGCGT----TGTATGTATCCGGCTTCTTTGCCGCTT chr5A_986 TAA--TGGCCGAAAGGCGT----TGTATGTATCCGGCTTCTTTGCCGCTT chr5A_986 TAA--TGGCCGAAAGGCGT----TGTATGTATCCGGCTTCTTTGCCGCTT chr3B_988 TAA--TGGCCGAAAGGCGT--------TGTATCCGGCTTCTTTGCCGCTT chr5D_1560 TAA--TGGCTGAAAGACGT--------TGTACCCGGCTTCTTTGCCGCTT chr5B_1570 TAATGTGGCAGAAAGGCAT--------TGTATCCGGCTTTTTTGCCGCTT chr2B_1578 TAA--TGGCCGAAAAGCGT--------TGTATCCGGCTTCTTTGCGGCTT chr2D_1578 TAA--TGGCAGAAAGACGT--------TGTATCCGGCTTCTTTGCCGCTT chr4D_1694 TAA--TGGCCGAAAGGCGT--------CGTATCCGGCTACTTTGCGACTT chr7D_1839 AAA--TGGCCGAAAGGCGT--------TGTATCCGGCTTCATTGCCGCTC chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ------------------------S------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTTCTTCAATATATGATACATATGCTTATGCGCATTGTAGAAAAAAGTAA chr5D_1_TraesCS5D01G005700 CTTCTTCAATATATGATACATATGCTTATGCGCATTGTAGAAAAAAGTAA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CTTCTTCAATATATGATACGTATGCTTATGCGCATTGTAGAAAAAAGTAA chr5A_973 CTTCCTCAATATATGATACGCATGCTTATGCGCATTGTAAAAAAAAGTAA chr5A_986 CTTCTTCAATATATGATACGCATGCTTATGCGCATTGTAGAAAAAAGTAA chr5A_986 CTTCCTCAATATATGATACGCATGCTTATGCGCATTGTAAAAAAAAGTAA chr5A_986 CTTCTTCAATATATGATATGCATGCTTATGCGCATTGTAGAAAAAAGTAA chr5A_986 CTTCTTCAATATATGATACGCATGCTTATGCGCATTGTAGAAAAAAGTAA chr3B_988 CTTCTTTAATATATGATACGTATGCTTATGCGCATTGTAGAAAAA-GTAA chr5D_1560 CTTCTTTAATATATGATACGCATGCTTATGCGTATTCTAGAAAAAA---- chr5B_1570 CTT-GTTAATATATGAAATGCATGCTTTTGTGTATTCTAGAATAAATATA chr2B_1578 CTTCTT-------------------------------------------- chr2D_1578 CTTCTT-------------------------------------------- chr4D_1694 CTTCGTTAATATATGATACGCATGCTCATGCGTATTCGAGAAAAATAGTA chr7D_1839 CTTCTTTAATATATGATAAACATGCTTATGCGTATTCGAGAAAAAA---- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TAACGCAACT---------------------------------------- chr5D_1_TraesCS5D01G005700 TAACGCAACT---------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAATGCAACTGTTCAATTAATTACCCTTGATATATATGATATGTATTTAT chr5A_973 TAACGCAACTGTTCAATTAATTACCCTCGATATATAT-------ATTTAT chr5A_986 TAACGCAACTGTTCAATTAATTACCCTCGATATATAT-------ATTTAT chr5A_986 TAACGCAACTGTTCAATTAATTACCCTCGATATATAT-------ATTTAT chr5A_986 TAACGCAACTGTTCAATTAATTACCCTCGATTTATAT-------ATTTAT chr5A_986 TAACGCAACTGTTCAATTAATTACCCTCGATATATAT-------ATTTAT chr3B_988 TAACGCAACTGTTCAATTAATTACCCTCGATATATA---------TTTAT chr5D_1560 -------------------------------------------------- chr5B_1570 TAA----------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCCACGCTCGA chr5D_1_TraesCS5D01G005700 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCCACGCTCGA chr5B_1 -------------------------------------------------- chr5B_925 ------CTTCTACCTGTAGCTCCCCGCCCTGTGAAAATTGCTACGCTCGA chr5B_927 ------CTTCTACCTGTAGCTCCCCGCCCTGTGAAAATTGCTACGCTCGA chr5B_934 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCCACGCTCGA chr5A_973 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCTACGCTCGA chr5A_986 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCTACGCTCGA chr5A_986 GTTCTACTTCTGCCCGTAGCTCCCCGCCCTGTGAAAATTTCTCCGCTCGA chr5A_986 GTCCCACATTTATGTCTTCTCGAAGAACCACCAAGGCCCTGCACAATGAA chr5A_986 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCTACGCTCGA chr3B_988 GTTCTACTTCTGCCTGTAGCTCCCCGCCCTGTGAAAATTGCCACGCTCAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -----------GCCTGTAGCTCCCCGCCCTGTGCAAATTCCTACAATCGC chr5A_2436 -----------GCCTGTAGCTCCCCGCCCTGTGCAAATTCCTACAATCGC chr4A_2436 -----------GCCTGTAGCTCCCAGCCCTGTGCAAATTCCTACAATCGC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTACT--------------------------------------------- chr5D_1_TraesCS5D01G005700 CTACT--------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 CTACT--------------------------------------------- chr5B_927 CTACT--------------------------------------------- chr5B_934 CTACT--------------------------------------------- chr5A_973 CTACT--------------------------------------------- chr5A_986 CTACT--------------------------------------------- chr5A_986 CTACT--------------------------------------------- chr5A_986 AAGGCAAGTAAGTTAGTATCTGCAAAAGATCTTGAATGTAAAGACACAAG chr5A_986 CTACT--------------------------------------------- chr3B_988 CTACT--------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTACT--------------------------------------------- chr5A_2436 TTACT--------------------------------------------- chr4A_2436 TTACT--------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 TAAGAGTCCACATAAGCACTTACCTCACACCGACTGGTTTGACAATGAGA chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 CCCTTATGTGGATATGGCCGCGAAGGGAGCGTGGACACACCACGCAACCA chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 GATACTTGCTCTGGCCACTCCTTTTGTATTTACAGTGACAACACTTGTAT chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 TTCCACAAGCTTAACATATAATTGACATGCCTGACTTATTCACTAGATTA chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 CAATATATGTATGAATTCTAGCATTTGTAATGTTTGCCCGTGCCTTTAAC chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 TTGTAAGGGGGGCAAATAATTTCTTCTAAAGAGATTTGGCAGAGAGCACA chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 AAGAGGTTATTCATATATGCGCCATGGCCCTCTCGGTGGAATCAAGGATT chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -----------ACAAACCTGCCACCAGGTTTCACACCGTCGAGCTTTTCC chr5D_1_TraesCS5D01G005700 -----------ACAAACCTGCCACCAGGTTTCACACCGTCGAGCTTTTCC chr5B_1 -------------------------------------------------- chr5B_925 -----------ACAAACCTCCCACCAGGTTTCACACCGTCGAGCTTTTCC chr5B_927 -----------ACAAACCTCCCACCAGGTTTCACACCGTTGGGCTTTTCC chr5B_934 -----------ACAAACCTGCCACCAGGTTTCACACCGTCGAGCTTTTCC chr5A_973 -----------ACAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr5A_986 -----------ACAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr5A_986 -----------ACAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr5A_986 TGCATCAGAAATAAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr5A_986 -----------ACAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr3B_988 -----------ACAAACCTGCCACCAGGTTTCACACCATCGAGCTTTTCC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -----------TCAAACCTCCGACCTTGTTTCACACTGATGAGCTCTTTT chr5A_2436 -----------TCAAACCTCCGACCTTGTTTCACACTGATGAGCTCTTTT chr4A_2436 -----------TCAAACCTCCGACCTTGTTTCACACTGATGAGCTCTTTT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCGTCCGTCGATCCGGAAGCAAGGCCGTGCTCCTCGCTGCGAAATTTCTT chr5D_1_TraesCS5D01G005700 CCGTCCGTCGATCCGGAAGCAAGGCCGTGCTCCTCGCTGCGAAATTTCTT chr5B_1 -------------------------------------------------- chr5B_925 CCGTTTGTCGATCCGGAAGCAAGGCAGTACTCCGCGCCGCAAAATTTCTT chr5B_927 CCGTTTGTCGATCCGGAAGCAAGGCGGTACTCCACGCCGCTAAATTTCTT chr5B_934 CCGTCCGTCGATCCGGAAGCAAGGCCGTGCTCCTCGCTGCGAAATTTCTT chr5A_973 CCGTCTTTCGATCCGGAAGCAAGGCTGTGCTCCTCGCTGCGAAATTTCTT chr5A_986 CCGTCTTTCGATCCGGAAGCAAGGCTGTGCTCCTCGCTGCGAAATTTCTT chr5A_986 CCGTCTTTCGATCCGGAAGCAAGGCTGTGCTCCTCGCTGCGAAATTTCTT chr5A_986 CCGTCTTTCGATCCGGAAGCAAGGCTGTGCTCCTCGCTGCGAAATTTCTT chr5A_986 CCGTCTTTCGATCCGGAAGCAAGGCTGTGCTCCTCGCTGCGAAATTTCTT chr3B_988 CCGTCCGTCGATCCGGAAGCAAGGCCGTGCTCCTCGCTGCGAAATTTCTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTGTCCGTCGATCTGGAACAAAGGCCGTGCTCTCGGCAGCCAAATTTCTT chr5A_2436 CTGTCCGTCGGTCTGGAACAAAGGCCGTGCTCTCGGCAGCCAAATTTCTT chr4A_2436 CTATCCGTCGATCTGGAACAAAGGCCGTGCTCTCGGCAGCCAAATTTCTT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTAGGGATTCCATCCTCTCTCGGTACTTTTATATGTATCCTT-------G chr5D_1_TraesCS5D01G005700 CTAGGGATTCCATCCTCTCTCGGTACTTTTATATGTATCCTT-------G chr5B_1 -------------------------------------------------- chr5B_925 CTAGGGGTTTCATCCTCTCTCAGTACTTTTATGTGTAACCTT-------G chr5B_927 CTAGGGGTTTCATCCTCTCTCGGTACTTTTATGTGTAACCTT-------G chr5B_934 CTAGGGATTTCATCCTTTCTCGGTACTTTTATATGTATCCTT-------G chr5A_973 CTAGGGATTTCATCCTCTCGCGGTACTTTTATATGTATCCTT-------G chr5A_986 CTAGGGATTTCATCCTCTCGTGGTACTTTTATATGTATCCTT-------G chr5A_986 CTAGGGATTTCATCCTCTTGCGGTACTTTTATATGTATCCTT-------G chr5A_986 CTAGGGATTTCATCCTCTCGCGGTACTTTTATATGTATCCTT-------G chr5A_986 CTAGGGATTTCATCCTCTCGTGGTACTTTTATATGTATCCTT-------G chr3B_988 CTAGGGATTTCATCCTCTCTCGGTACTTTTATATGTATCCTT-------G chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTAGGGGTTTCATCCTCTCTCGGTACGTGCATATGTGGTCTTGTACTACG chr5A_2436 CTAGGGGTTTCATCCTCTCTCGGTACGTGCATATGTGGTCTTGTACTACG chr4A_2436 CTAGGGGTTTCATCCTCTCTCGGTACGTGCATATGTGGTCTTGTACTACG chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------S---------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGCCCTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCTCG--- chr5D_1_TraesCS5D01G005700 TGCCCTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCTCG--- chr5B_1 -------------------------------------------------- chr5B_925 CACCCTCTATATGATTTGGATTATTTGTTATTTGATTCGTCGTCGTGCGT chr5B_927 CACCCTCTATATGATTTGGATTATTTGTTATTTGATTCGTCGTCGTGTGT chr5B_934 TACCCTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCTCG--- chr5A_973 TACACTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCGCG--- chr5A_986 TACACTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCGCG--- chr5A_986 TACACTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCGCG--- chr5A_986 TACACTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCGCG--- chr5A_986 TACACTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCGCG--- chr3B_988 TACCCTCTAT--GATTTGGA-------TTAGTTGATCCGTCGTCTCG--- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TACCCTCCAT--GTTTCAGA-------TTGT--------TCGTCGCG--- chr5A_2436 TACCCTCCAT--GTTTCGGA-------TTGT--------TCGTCGCG--- chr4A_2436 TACCCTCCAT--GTTTCGGA-------TTGT--------TCGTCGCG--- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -S------------------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr5D_1_TraesCS5D01G005700 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr5B_1 ------------------------------------------------TG chr5B_925 GCAACTTACAACATACAA-TATATATTGTGCTTGAATCACACAGATGGTA chr5B_927 GCAACTTACAACATACAA-TATATATTGTGCTTGAATCACATAGATGGTA chr5B_934 --------CAACTTAACA-CATATATTGTGTTTGAATCACACAGATGGTG chr5A_973 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr5A_986 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr5A_986 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr5A_986 --------CAACTTAACA-TATATATTTTGTTTGAATCACACAGATGGTG chr5A_986 --------CAACTTAACA-TATATATTGTGTTTGAATCACACAGATGGTG chr3B_988 --------CAACTTAACA-TATATATTGTGTTTGAATCAGACAGATGGTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 --------CAGCTTGATCGTATATCTTGTGCTTGAATCACACAGATGGTG chr5A_2436 --------CAGCTTGATCGTATATCTTGTGCTTGAATCACACAGATGGTG chr4A_2436 --------CAGCTTGATCGTATATCTTGTGCTTGAATCACACAGATGGTG chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AACCGCTCAGACGGTGCTCTGGCTTCTGGGTCGATTGGGTTGAGGAGAAG chr5D_1_TraesCS5D01G005700 AACCGCTCAGACGGTGCTCTGGCTTCTGGGTCGATTGGGTTGAGGAGAAG chr5B_1 AGCCACCGAGAGGGTCAGGTGTGGTCTGGTGC------------------ chr5B_925 GGCCGCTAAGATGGTGCTCTGGCCTCTGGGTCGATTGGGATGTGTAGAAG chr5B_927 GGCCGCTAAGACGGTGCTCTGGCCTCTGGGTCGATTGGGATGTGTAGAAG chr5B_934 AACCGCTCAGACGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr5A_973 AACCGCTAAGAAGGTGCTCTGGCTTCTGGGTCGGTTGGGACGAGGAGAAG chr5A_986 AACCGCTAAGAAGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr5A_986 AACCGCTAAGAAGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr5A_986 AACCGCTAAGAAGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr5A_986 AACCGCTAAGAAGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr3B_988 AACCGCTCAGACGGTGCTCTGGCTTCTGGGTCGATTGGGATGAGGAGAAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AACCGCTAAGACGGTGCTCTGGCTTCTGGATTGATTGGGATGAGGAGAGG chr5A_2436 AACCGCTAAGACGGTGCTCTGGCTTCTGGATTGATTGGGATGAGGAGAGC chr4A_2436 AACCACTAAGACGGTGCTCTGGCTTCTGGATTGATTGGGATGAGGAGAGC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------------------------------------S---------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 ---------------------------------------TTGAGGAGAAG forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 ---------------------GCTTCTGGGTCGATTGGGT---------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5D_1_TraesCS5D01G005700 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5B_1 -------------------------------------------------- chr5B_925 AAAACTGGCCTTGTTTTGACAACTGCGCAGCTGATTCGCACAAAGGATGC chr5B_927 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5B_934 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5A_973 AAAACTGGCCTTGTTTTGACAACTGCACGGCTGATTCGCACAAAGGATGC chr5A_986 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5A_986 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr5A_986 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCA---AGGATGC chr5A_986 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCACAAAGGATGC chr3B_988 AAAACTGGCCTTGTTTTGACAACTGCGCGGCTGATTCGCATAAAGGATGC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AAAACCGGCCTTGTTCTGACAACCGCGCGGCTGATTCGCACAAAGGATGC chr5A_2436 AAAACCGGCCTTGTTCTGACAACCGCGCGGCTGATTCGCACAAAGGATGC chr4A_2436 AAAACCGGCCTTGTTCTGACAACCGCGTGGCTGATTCGCGCAAAGGATGC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 AAAACTGGCCT--------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5D_1_TraesCS5D01G005700 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5B_1 -------------------------------------------------- chr5B_925 TCCTTACAGTGTCTGGTCAGGGGGTGAAGAGTACGCTACAGCTGCTGATG chr5B_927 TCCTTACAGTGTCTGGTCAGGGGGTGAAGAGTATGCTACAGATGCTGATG chr5B_934 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5A_973 TCCTTATAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5A_986 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5A_986 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5A_986 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5A_986 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr3B_988 TCCTTACAGTGTCTGGTCAGGCGGTGAAGAGTATGCTACAGATGCTGATG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TCCTGTCAGCGTCTGGTCAGGCGGTGAAGAGTATGCTACAAACGCTGATG chr5A_2436 TCCTGTCAGCGTCTGGTCAGGCGGTGAAGAGTATGCTACAAACGCTGATG chr4A_2436 TCCTGTCAGCGTCTGGTCAGGCGGTGAAGAGTATGCTACAAACGCTGATG chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTATATGCATGTACTATCTT chr5D_1_TraesCS5D01G005700 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTATATGCATGTACTATCTT chr5B_1 -------------------------------------------------- chr5B_925 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTATATGCATGTGCTATCTT chr5B_927 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTATATGCATGTACTATCTT chr5B_934 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTACATGCATGTACTATCTT chr5A_973 TGAGTCAATGTGCTTTTTCTATTAATTTCTATATATGCATGTACTATCTT chr5A_986 TGAGTCAATGTGCTTTTTCTATTAATTTCTATATATGCATGTACTATCTT chr5A_986 TGAGTCAATGTGCTTTTTCTATTAATTTCTATATATGCATGTACTATCTT chr5A_986 TGAGTCAATGTGCTTTTTCTATTAATTTCTATATATGCATGTACTATCTT chr5A_986 TGAGTCAATGTGCTTTTTCTATTAATTTCTATATATGCATGTACTATCTT chr3B_988 TGAGTCAATGTGCTTCTTCTATTAATTTCTGTATATGCATGTACTATCTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TGAGTCAATGTGTTTCTTCTATTAAT--------------GTACTTTCTT chr5A_2436 TGAGTCAATGTGTTTCTTCTATTAAT--------------GTACTTTCTT chr4A_2436 TGAGTCAATGTGTTTCTTCTATTAAT--------------GTA-TTTCTT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTTGGTGTA------ chr5D_1_TraesCS5D01G005700 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTTGGTGTA------ chr5B_1 -------------------------------------------------- chr5B_925 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTCGGTGTA------ chr5B_927 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTCGGTGTA------ chr5B_934 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTTGGTGTA------ chr5A_973 TTACAGCTGGTTCCATCTAAAAAAATGATAATCT------TGTA------ chr5A_986 TTACAGCTGGTTCCATCTAAAAAAATGATAATCT------TGTA------ chr5A_986 TTACAGCTGGTTCCATCTAAAAAAATGATAATCT------TGTA------ chr5A_986 TTACAGCTGGTTCCATCTAAAAAAATGATAATCT------TGTA------ chr5A_986 TTACAGCTGGTTCCATCTAAAAAAATGATAATCT------TGTA------ chr3B_988 TTACAGCTGGTTCCATCTCAAATAAATAAAATAATCTTGGTGTA------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------TGGTTCCATCGTAAATAAATAAATTAATCTCCGGTGTAAATCT chr5A_2436 TTCAAACTGGTTCCATCGGATATAAATAAATTAATCTCCGGTGTAAATCT chr4A_2436 TTCAAACTGGTTCCGTCGTAAATAAATAAATTAATCTCCGGTGTAAATCT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------TTGCAATTCACATA--TTTTTTCTATGTGCTATTGGCCTTTTCT chr5D_1_TraesCS5D01G005700 ------TTGCAATTCACATA--TTTTTTCTATGTGCTATTGGCCTTTTCT chr5B_1 -------------------------------------------------- chr5B_925 ------TTGCAATTCACATA--TTTTTT-TGTGTTCTATTGGCCTTTTCT chr5B_927 ------TTGCAATTCACATA--TTTTTG-TGTGTTCTATTGGCCTTTTCT chr5B_934 ------TTGCAATTCACATA--TTTTTTCTATGTGCTATTGGCCTTTTCT chr5A_973 ------TTGCAATTCACATG--TTTTTTGTGTGTGCTATTGGCCTTTTCT chr5A_986 ------TTGCAATTCACATG--TTTTTTGTGTGTGCTATTGGCCTTTTCT chr5A_986 ------TTGCAATTCACATG--TTTTTTGTGTGTGCTATTGGCCTTTTCT chr5A_986 ------TTGCAATTCACATG--TTTTTTGTGTGTGCTATTGGCCTTTTCT chr5A_986 ------TTGCAATTCACATG--TTTTTTGTGTGTGCTATTGGCCTTTTCT chr3B_988 ------TTGCAATTCACATA--TTTTTTCTATGTGCTATTGGCCTTTTCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AACTAGTTGCAATTCACATG--TTTTTTCT---TGCTATTGGCCTTTTCA chr5A_2436 AACTAGTTGCAATTCACAAGTTTT--TTCT---TGCTATTGGCCTTTTCA chr4A_2436 AACTAGTTGCAATTCACATGTTTTTTTTCT---TGCTATTGGCCTTTTCA chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AATAACAAAATGGAAACAAAACACGCC--TTCGCTTACCATTCAAAAATC chr5D_1_TraesCS5D01G005700 AATAACAAAATGGAAACAAAACACGCC--TTCGCTTACCATTCAAAAATC chr5B_1 -------------------------------------------------- chr5B_925 AATAACAAAATGGAAACAAAACAGGCC--TTCGCTTACCATTCAAAAATC chr5B_927 AATAACAAAATGGAAACAAAACACACC--TTCGCTTACCATACAAAAATC chr5B_934 AATAACTAAATGAAAACAAAACACGCC--TTCGCTTACCATTCAAAAATC chr5A_973 AATAACGAAATGGAAACAAAACACACC--TTCGCTTAC----CAAAAGTC chr5A_986 AATAACGAAATGGAAACAAAACACACC--TTCGCTTAC----CAAAAGTC chr5A_986 AATAACGAAATGGAAACAAAACACACC--TTCGCTTAC----CAAAAGTC chr5A_986 AATAACGAAATGGAAACAAAACACACC--TTCGCTTAC----CAAAAGTC chr5A_986 AATAACGAAATGGAAACAAAACACACC--TTCGCTTAC----CAAAAGTC chr3B_988 AATAACTAAATGGAAACAAAACACGCC--TTCGCTTACCATTCAAAAATC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AATAACAAAATGGAAACAAAACATGTGT--TTGCTTACTATTAAAAAATC chr5A_2436 AATAACAAAATGGAAACAAAACATATGTGTTTGCTTACTATTCAAAAATC chr4A_2436 AATAACAAAATGGAAACAAAACA--TGTGTTTGCTTACTATTCAAAAATC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTATATAATCTGTTCTGCAAC-TTTGTTTAGGTCACTGTTCATTTGCTAA chr5D_1_TraesCS5D01G005700 GTATATAATCTGTTCTGCAAC-TTTGTTTAGGTCACTGTTCATTTGCTAA chr5B_1 -------------------------------------------------- chr5B_925 GTATATAATCTGGTCTGCAAC-TTTTTTTAGGTCACTGTTCATTTGCTAA chr5B_927 GTATATAATCTGTTCCGCAAC-TTTTTTTAGGTCACTGTTCATTTGCTAA chr5B_934 GTATATAATCTGTTCTGCAAC-TTTTTTTAGGTCACTGTTCATTTGCTAA chr5A_973 GTATATAATCTGTTCTGCAAC-CATTTTTAGGTCACTGTTCATTTGCTAA chr5A_986 GTATATAATCTGTTCTGCAAC-CATTTTTAGGTCACTGTTCATTTGCTAA chr5A_986 GTATATAATCTGTTCTGCAAC-CATTTTTAGGTCACTGTTCATTTGCTAA chr5A_986 GTATATAATCTGTTCTGCAAC-CATTTTTAGGTCACTGTTCATTTGCTAA chr5A_986 GTATATAATCTGTTCTGCAAC-CATTTTTAGGTCACTGTTCATTTGCTAA chr3B_988 GTATATAATCTGTTCTGCAAC-TTTGTTTAGGTCACTGTTCATTTGCTAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTATATAATCTGTCTCACAAC--TTTTTTAGGTCACTGTTCATTTGCTAA chr5A_2436 CTATATAATCTGTCTCACAAC-TTTTTTTAGGTCACTGTTCATTTGCTAA chr4A_2436 CTATATAATCAGTCTCACAACTTTTTCTTAGGTCACTGTTCATTTGCTAA chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5D_1_TraesCS5D01G005700 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5B_1 -------------------------------------------------- chr5B_925 ATGGCACCGGTGCAAAGGGCCAGCTGGTGTATCTCCAGCCCCACTACGAT chr5B_927 ATGGCACCAGTGCAAAGGGCCAGCTGGTGTATCTCCAGCCCCACTACGAT chr5B_934 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAG chr5A_973 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5A_986 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5A_986 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5A_986 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5A_986 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr3B_988 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCTCCAGCCCCACTACGAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATGGCACCAGTGCAAAGGGTCAGCTGGTCTATCACCAGCCCCACTATGAT chr5A_2436 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCACCAGCCCCACTACGAT chr4A_2436 ATGGCACCAGTGCAAAGGGCCAGCTGGTCTATCACCAGCCCCACTATGAT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTCGCTTTCCTGAGCGTTCAGGTGGATCAACCAATCAACTTACCATCTTT chr5D_1_TraesCS5D01G005700 CTCGCTTTCCTGAGCGTTCAGGTGGATCAACCAATCAACTTACCATCTTT chr5B_1 -------------------------------------------------- chr5B_925 CTCGCTTTCCTGAGCGTTCAGGTGGATCAACCAATCAACGTACCATCTTT chr5B_927 CTCGCTTTCTTGAGCGTTCAGGTGGATCAACCAATCAACGTACCATCTTT chr5B_934 CTCGCTTTCCTGAGCGTTCAGGTGGATCAACCAATCAACTTGCCATCTTT chr5A_973 CTCGCTTTCCTGGGTGTTCAGGTGGATCAACCAATCAACTTACCATCTTT chr5A_986 CTCGCTTTCCTGAGCGTTCAGGAGGATCAACCAATCAACTTACCATCTTT chr5A_986 CTCGCTTTCCTGAGCGTTCAGGTGGATCAACCAATCAACTTACCATCTTT chr5A_986 CTCGCTTTCCTGAACGTTCAGGTGGATCAACCAATCAACTTACCATCTTT chr5A_986 CTCGCTTTCCTGAGCGTTCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 CTCGCTTTCCTGAGTGTTCAGATGGATCAACCAATCAACTTACCATCTTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTCGCTTTCCTGAATGTTCAGATGGATCAACCAATCAAGTTACCATCTTT chr5A_2436 CTCGCTTTCCTGAATGTTCAGATGGATCAACCAATCAAGTTACCATCTTT chr4A_2436 CTCGCTTTCCTGAATGTTCAGATGGATCAACCAATCAAGTTACCATCTTT chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5D_1_TraesCS5D01G005700 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5B_1 -------------------------------------------------- chr5B_925 GAATGAAAAAAATGTAAAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5B_927 GAATGAAAAAAATGTAAAATTTGCTCAAGAGGTTTTTTGGTTCAGAAGAG chr5B_934 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5A_973 GAA----------------------------------------------- chr5A_986 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5A_986 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5A_986 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCAGAAGAG chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TAATGAAGAAGATGTAGAATTTGCTCAAAAGATTTTTCGACTCGGAAGAG chr5A_2436 TAATGAAAAAGATGTAGAATTTGCTCAAAAGATTTTTCGACTTGGAAGAG chr4A_2436 TAATGAAAAAGATGTAGAATTTGCTCAAAAGATTTTTCGACTTGGAAGAG chr5A_3174 GAATGAAAAAGATGTAGAATTTGCTCAAGAGGTTTTTCGGCTCGGAAGAG chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5D_1_TraesCS5D01G005700 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5B_1 -------------------------------------------------- chr5B_925 ACAATTCCTTGGATCTAAGGATGACATATGCTAGGGCAGAATATTTGAAT chr5B_927 ACAATTCCTTGGATCTAAGGATAACATATGCTAGGGCAGAATATTTGAAT chr5B_934 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5A_973 -------------------------------------------------- chr5A_986 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5A_986 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5A_986 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ACAATGCCTTAAATCTAAGGATAACATATGCTAGAGCAGAATATCTGAAT chr5A_2436 ACAATGCCTTAAATCTAAGGATAACATATGCTAGAGCAGAATATCTGAAT chr4A_2436 ACAATGCCTTAAATCTAAGGATAACATATGCTAGAGCAGAATATCTGAAT chr5A_3174 ACAATTCCTTAAATCTAAGGATAACATATGCCAGGGCAGAATATTTGAAT chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5D_1_TraesCS5D01G005700 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5B_1 -------------------------------------------------- chr5B_925 CCAACCATGTTTGAGCGGCACCACAATGTATATTTCCGTTCTCCAGATGG chr5B_927 CCAACCATGTTTGAGCGGCATCACAATGTATATTTCCGTTCTCCAGATGT chr5B_934 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5A_973 -------------------------------------------------- chr5A_986 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5A_986 CCAACTATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5A_986 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTGCAGATGG chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 CCAACCATGTTTGAGCGGCACCACAATGTATACCTCCGTTCTCCAGATGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CCAACCATGTATGAACGGTACCACAATATATATTTCCGTTCTCCAGATGG chr5A_2436 CCAAGCATGTATGAACGGTACCACAATATATATTTCCGTTCTCCAGATGG chr4A_2436 CCAACCATGTATGAACGGTACCACAATATATATTTCCGTTCTCCAGATGG chr5A_3174 CCAACCATGTTTGAGCGGCACCACAATGTATACTTCCGTTCTCCAGATGG chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGAA-TTAT chr5D_1_TraesCS5D01G005700 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGAA-TTAT chr5B_1 -------------------------------------------------- chr5B_925 CCATGGCGATGATAATGAGGTAATATATCTTATCATTTGATAGTGGTGAT chr5B_927 CCATGGCGATGATAATGAGGTAATATATCTTATCATTTGATAGTA-TGAT chr5B_934 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGAA-TTAT chr5A_973 -------------------------------------------------- chr5A_986 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGTA-TTAT chr5A_986 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGTA-TTAT chr5A_986 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGTA-TTAT chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGAA-TTAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CCATGGCGATGATAATGAGGTAATATATCTTATCATGAGATAGTA-TTGT chr5A_2436 CCATGGCGATGATAATGAGGTAATATATCTTATCATGAGATAGTA-TTGT chr4A_2436 CCATGGCGATGATAATGAGGTAATATATCTTATCATGAGATAGTA-TTGT chr5A_3174 CCATGGTGATGATAATGAGGTGATATATCTTATCATTAGATAGTA-TTAT chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5D_1_TraesCS5D01G005700 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5B_1 -------------------------------------------------- chr5B_925 ATACATTTGGTATAGTTTTGAGTTTCATGTGATGTCATCTTTAAGTTCTA chr5B_927 ATACAGTTGGTATAGTTTTGAGTTCCGGGTGATGTCATCTTTAAGTTCTA chr5B_934 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5A_973 -------------------------------------------------- chr5A_986 ACACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5A_986 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTGTGTTCTA chr5A_986 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATACATTTGTTACAATTTTGAGTTTTGTTTGATGACAACTTTGTGTTCTA chr5A_2436 ATAGATTTGTTACAATTTTGAGTTTTGTTTCATGACAACTTTGTGTTCTA chr4A_2436 ATAGATTTGTTACAATTTTGAGTTTTGTTTCATGACAACTTTGTGTTCTA chr5A_3174 ATACATTTGGTACAGTTTTGAGTTTTGTGTGATGTCATCTTTATGTTCTA chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAACTTTCATA chr5D_1_TraesCS5D01G005700 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAACTTTCATA chr5B_1 -------------------------------------------------- chr5B_925 TATTGCAATCTATTGTTATAACATTTTTCTTGTTCTCGCTAA--CTCATA chr5B_927 TATTGCAATCTATTGTTATAACATTTTTCTTGTTCTTGCTAACTCTCATA chr5B_934 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAACTTTCATA chr5A_973 -------------------------------------------------- chr5A_986 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAACTTTCATA chr5A_986 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAAGTTTCATA chr5A_986 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAACTTTCATA chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 TATTGCAATCTATTGTTATAACATT-TTTTTGTTCTTGCAAACTTTCATA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATTGCTATCTATTGTTATAAGATTTTCCTTGTTCTTGCAAACTCTC--A chr5A_2436 TATTGCTATCTATTGTTATAAGATTTTCCTTGTTCTTGCAAACTCTC--A chr4A_2436 TATTGCTATCTATTGTTATAAGATTTTCCTTGTTCTTGCAAACTCTC--A chr5A_3174 TATTGCAATCTATTGTTATAACATTTTTTTTGTTCTTGCAAAGTTTCATA chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCCAGTTA chr5D_1_TraesCS5D01G005700 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCCAGTTA chr5B_1 -------------------------------------------------- chr5B_925 TATGTTGCCAACATTAATTGTTGCAGTATGACAATGGGGGGGGGCACTTA chr5B_927 TATGTTGCCAACATGAATTGTTGCAGT----------------------- chr5B_934 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCCAGTTA chr5A_973 -------------------------------------------------- chr5A_986 TATGTTGCCAATATGAATTGTTGCTGTTTGACTAT--GGGGGGCCAGTTA chr5A_986 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCTAGTTA chr5A_986 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCCAGTTA chr5A_986 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr3B_988 TATGTTGCCAATATGAATTGTTGTAGTTTGACTAT--GGGGGGCCAGTTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATGTTGCCAATATGAATTGTTGCAGTATGACAAT--GGGGGGCCAGTTA chr5A_2436 TATGTTGCCAATATGAATTGTTGCAGTATGACAAT--GGGGGGCCAGTTA chr4A_2436 TATGTTGCCAATATGAATTGTTGCAGTATGACAAT--GGGGGGCCAGTTA chr5A_3174 TATGTTGCCAATATGAATTGTTGCAGTTTGACTAT--GGGGGGCCAGTTA chr5B_3485 ------------ATGAATTGTTGCAGTTTGACTAT--GGGGGGGCAGTTA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTGACCTGTGTGGTGAAGTTGTCGGAATGGTCAACGACCCTAAGAGATTT chr5D_1_TraesCS5D01G005700 TTGACCTGTGTGGTGAAGTTGTCGGAATGGTCAACGACCCTAAGAGATTT chr5B_1 -------------------------------------------------- chr5B_925 TTGACTTGGGTGGAGAAGTTGTCGGAATGGTCAACGTCCCTAAGTGATTC chr5B_927 -------------------------------------------------- chr5B_934 TTGACCTGTGTGGAGAAGTTGTCGGAATGGTCAACGACCCTAAGAGATTT chr5A_973 -------------------------------------------------- chr5A_986 TTGACCTGCGTGGAGAAGTTGTCGGAATGGTCAACGTCCCTAAGAGATTT chr5A_986 TTGACCTGCGTGGAGAAGTTGTCGGAATGGTCAACGTCCCTAAGAGATTT chr5A_986 TTGACCTGCGTGGAGAAGTTGTCGGAATGGTCAACGTCCCTAAGAGATTT chr5A_986 N------------------------------------------------- chr3B_988 TTGACCTGTGTGGAGAAGTTGTCGGAATGGTCAACGACCCTAAGAGATTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTGACTTGGGTGGAAAAGTGGTCGGAATTGTCAATGACCCTGAGAGATTT chr5A_2436 TTGACTTGGGTGGAAAAGTGGTCGGAATGGTCAATGACCCTGAGAGATTT chr4A_2436 TTGACTTGGGTGGAAAAGTGGTCGGAATGGTCAATGACCTTGAGAGATTT chr5A_3174 TTGACCTGCGTGGAGAAGTTGTCGGAATGGTCAACGTCCCTAAGAGATTT chr5B_3485 TTGACCTGTGTGGAGAAGTAGTCGGAATGGTCAACGACCCTAAGAGATTT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------S------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------TGAAGTTGTCGGAATGGTCAAC--------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGGTCTTTTGTACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5D_1_TraesCS5D01G005700 GGGTCTTTTGTACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5B_1 -------------------------------------------------- chr5B_925 AGGTCTTTCATACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5B_927 -------------------------------------------------- chr5B_934 GGGTCTTTTATACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATCGA chr5A_973 -------------------------------------------------- chr5A_986 GGGTCTTTCATACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5A_986 GGGTCTTTCATACCTTCTTCC-ATTTTGCTCAATTGTTCGGATTCATGGA chr5A_986 GGGTCTTTCATACCTTCTT-C-ATTTTGCTCAATTGTTTGGATTCATGGA chr5A_986 -------------------------------------------------- chr3B_988 GGGTCTTTTATACCTTCTT-CCATTTTGCTCAATTGTTTGGATTCATGGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GAGTCTTTTATACCTTCTTCC-ATTGTGCTCAATTGTTTGGATTCATGGA chr5A_2436 GAGTCTTTTATACCTTCTTCC-ATTGTGCTCAATTGTTTGGATTCATGGA chr4A_2436 GAGTCTTTTATACCTTCTTCC-ATTGTGCTCAATTGTTTGGATTCATGGA chr5A_3174 GGGTCTTTCATACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5B_3485 GGGTCTTTTATACCTTCTTCC-ATTTTGCTCAATTGTTTGGATTCATGGA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------S---------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGAAATATCAGTACGTTTTTTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5D_1_TraesCS5D01G005700 AGAAATATCAGTACGTTTTTTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5B_1 -------------------------------------------------- chr5B_925 AGAAATATTAGTATGTTTTTTCTCTCAATGTTGTGATAGTATCAGACT-A chr5B_927 -------------------------------------------------- chr5B_934 AGAAATATCAGTACGTTTTCTCTCTCAGTGCTGTCATAGTATTAGACT-A chr5A_973 -------------------------------------------------- chr5A_986 AGAAATATCAGTACGTTTTCTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5A_986 AGAAATATCAGTACGTTTTCTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5A_986 AGAAATATCAGTACGTTTTCTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5A_986 -------------------------------------------------- chr3B_988 AGAAATATCAGTACGTTTTTTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GGAAATATCGGTACGTTTTCCCTCTTAGTTCTGTAATGGTATCAATGAAA chr5A_2436 GGAAATATCAGTACGTTTTTCCTCTCAGTTCTGTAATGGTATCAATGAAA chr4A_2436 GGAAATATCGGTACGTTTTTCCTCTCAGTTCTGTAATGGTATCAATGAAA chr5A_3174 AGAAATATCAGTACGTTTTCTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5B_3485 AGAAATATCAGTACGTTTGTTCTCTCAGTGCTGTGATAGTATTAGACT-A chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACCTATTTT-AGGAGTC--AT chr5D_1_TraesCS5D01G005700 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACCTATTTT-AGGAGTC--AT chr5B_1 -------------------------------------------------- chr5B_925 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACGTATTTTTAGGAGTCAAAT chr5B_927 -------------------------------------------------- chr5B_934 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACCTATTTTTAGGAGTCA--T chr5A_973 -------------------------------------------------- chr5A_986 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACGTATTTTTAGGAGTC--AT chr5A_986 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACGTATTTTTAGGAGTC--AT chr5A_986 ATGTGGTGTCTCCTAATTGTTC-TTTTT-ACGTATTTTTAGGAGTC--AT chr5A_986 -------------------------------------------------- chr3B_988 ATGTGGTGTCTCCTAATTGTTA-TTTTT-ACCTATTTTTAGGAGTC--AT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATGTGTTC--CCCTATTGTTTCTTTTCT-ACTTATTGTTAGGAGTCGGAC chr5A_2436 ATGTGTTCTCCCCTATTGTTTC-TTTTTCACTTATTGTTAGAAGTCGAAC chr4A_2436 ATGTGTTCTCCCCTATTGTTTC-TTTTTTACTTATTGTTAGAAGTCGAAC chr5A_3174 ATATGGTGTCTCCTAATTGTTC-TTTTT-ACGTATTTTTAGGAGTC--AT chr5B_3485 ATGTGGTGTCTCCTAATTGTTC-TTTTT-AC------------------C chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATTACCATA chr5D_1_TraesCS5D01G005700 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATTACCATA chr5B_1 -------------------------------------------------- chr5B_925 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATGACCATA chr5B_927 -------------------------------------------------- chr5B_934 TACTTTTAGTAGTGTCTATTTTCTCACTTTTATGAAATTTAATTACCATA chr5A_973 -------------------------------------------------- chr5A_986 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATGACCATA chr5A_986 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATGACCATA chr5A_986 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATGACCATA chr5A_986 -------------------------------------------------- chr3B_988 TATTTTTAGTGGTATCTATTTCCTCACTTTTATGGAATTTAATTACCATA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATTTCTCATAGTATCTATTTTATCATTTTTATGCAATCTAATGACCATA chr5A_2436 TATTTCTCGTAGTATCTGTTTTATCATTTTTATGCAATCTAATGACCATA chr4A_2436 TATTTCTCGTAGTATCTGTTTTATCATTTTTATGCAATCTAATGAACATA chr5A_3174 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATGACCATA chr5B_3485 TATTTTTAGTAGTATCTATTTTCTCACTTTTATGAAATTTAATTACCATA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGTTGTGTAAAGATTCTCAAAGAATATATATGTGTGTGTG--------TA chr5D_1_TraesCS5D01G005700 AGTTGTGTAAAGATTCTCAAAGAATATATATGTGTGTGTG--------TA chr5B_1 -------------------------------------------------- chr5B_925 AGTTGTGTAAAGATTCTCATAGAAAATA---------------------- chr5B_927 -------------------------------------------------- chr5B_934 AGTTGTGTAAAGATTCTCAAAGAATATATATGTGTGTGTG--------TG chr5A_973 -------------------------------------------------- chr5A_986 AGTTGTGTAAAGATTTTCAAAGAAAATATCATCATCATCTCGTTTGAACA chr5A_986 AGTTGTGTAA-GATTTTCAAAGAAAATATCATCATCATCTCGTTTGAACA chr5A_986 AGTTGTGTAAAGATTTTCAAAGAAAATATCATCATCATCTCGTTTGAACA chr5A_986 -------------------------------------------------- chr3B_988 AGTTGTGTAAAGATTCTCAAAGAATATATATGTGTGTATA---------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AGTTATGTATAGATTCTAAAACATGGTGATCATTGTTGTGTTTTATTATG chr5A_2436 AGTTATGTATAGATTCTACAACAAGGTGATCATTGTTGTGTTTTATTATG chr4A_2436 AGTTATGTATAGATTCTACAACAAGGTGATCATTGTTGTGTTTTATTATG chr5A_3174 AGTTGTGTAAAGATTTTCAAAGAAAATATCATCATCATCTCGTTTGAACA chr5B_3485 AGTTGTGTAAAGATTCTCAAAGAATATATATGTGTGTGTG--------TG chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TACATATAT----------------------------------------- chr5D_1_TraesCS5D01G005700 TACATATAT----------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TATATATAT----------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 T----------------------GTGGCTACAGTAAATAATTTAGCAATA chr5A_986 T----------------------GTGGCTAAAGTAAATAATTTAGGAATA chr5A_986 T----------------------GTGGCTACAGTAAATAATTTAGCAATA chr5A_986 -------------------------------------------------- chr3B_988 TATATATAT----------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATATATACAGAGAGATATGTTAGTGGCTGCAATAAATAACTTAACAACA chr5A_2436 TATATATACAGAGAGATATGTTAGTGGCTGCAATATATAACTTAACAACA chr4A_2436 TATATATACAGAGAGATATGTTAGTGGCTGCAATATATAACTTTACAACA chr5A_3174 T----------------------GTGGCTACAGTAAATAATTTAGCAATA chr5B_3485 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --S----------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATACTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5D_1_TraesCS5D01G005700 ATACTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ATACTCATTTGTAAGAAAATCAAGAACTAGATCT-TGAT-GGGGCCTAGA chr5A_973 -------------------------------------------------- chr5A_986 ATGCTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5A_986 ATGCTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5A_986 ATGCTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5A_986 -------------------------------------------------- chr3B_988 ATACTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATAATCATTTATAAGCAAATCAAGAACTGGGTCTTTGAGGGGGGCCTAGA chr5A_2436 ATAATCATTTATAAGCAAATCAAGAACT-------------GGGTCTAGA chr4A_2436 ATAATCATTTATAAGCAAATCAAGAACT-------------GGGTCTAGA chr5A_3174 ATGCTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5B_3485 -TACTCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5B_3819 ----TCATTTGTAAGAAAATCAAGAACTAGATCTTTGAT-GGGGCCTAGA chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5D_1_TraesCS5D01G005700 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAGGAAGAAACAAGTAGAACGGCG-TGAGAGTGCAAAATGTGT------- chr5A_973 -------------------------------------------------- chr5A_986 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5A_986 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5A_986 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5A_986 -------------------------------------------------- chr3B_988 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CAAAAACAAACATGTAGAACCACGCTGAGATGCTGAGAGTACAAAATGGA chr5A_2436 CAAAAACAAACATCTAGAACCACGCTGAGATGCTGAGAGTACAAAATGGA chr4A_2436 CAAAAACAAACATCTAGAACCACGCTGAGATGCTGAGAGTACAA-ATGGA chr5A_3174 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5B_3485 TAGGAAGAAACAAGTAGAACGGCGCTGAGAGTGCAAAATGTGT------- chr5B_3819 GAGGAAGAAACAAGTAGAACCAGCCTGAGAGTGCAAAATGTGT------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTACGATGACAACTAGTTATAAGAAGGGTTCTGCTTTGCATGTCCTTAGC chr5A_2436 TTATGATGACAACTAGTTATAAGAAGGGTTCTGCTTTG-ATGTCCTTAGC chr4A_2436 TTATGATGACAACTAGTTATAAGAAGGGTTCTGCTTTG-ATGTCCTTAGC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CAAGTTCTAGAGTAAAGTTTAATGGAAAAC---TATGTTTTAGGCTTTTC chr5A_2436 CAAGTTCTAGAGTAAAGTTTAATGGAAAAAAAATATGTTTTAGGCTTTTC chr4A_2436 CAAGTTCTAGAGTAAAGTTTAATGGA-AAAAAATATGTTTAAGGCTTTTC chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TCTCAATTTTGATGGACAATTTTCCTGAAGCCATCCTTTTTCAAGGAGAG chr5A_2436 TCTCAATTTTGATGGACAATTTTCCTGAAGCCATCTTTTTTCAAGGAGAG chr4A_2436 TCTCAATTTTGATGGACAATTTTCCTGAAGCCATCTTTTTTCAAGGAGAG chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTTCAAGTTAAACCTATGAGATATTCATGAACAAATGTATTTTGTGATAC chr5A_2436 TTTCAAGTTAAACCTATGAGATATTCATGAACAAATGTATT--------C chr4A_2436 TTTCAAGTTAAACCTATGAGATATTCATGAACAAATGTATT--------C chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TCAGCCGTTCTCAG------------------------------------ chr5A_2436 TCAGCCGTTCTCAGTCGTAATGAAATATGATGTACTCCCTCCGTCCCATA chr4A_2436 TCAGCCGTTCTCAGTCATAATGAAATATGATGTACTCCCTCCGTCCCATA chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------TCAAAAACGCTCTTATATTATGGGA chr5A_2436 ATATAAGAGCGTTTTTGAG--TGTGTCAAAAACGCTCTTATATTATGGGA chr4A_2436 ATATAAGAGCGTTTTTGACATTGTGTCAAAAACGCTCTTATATTATGGGA chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAGT chr5D_1_TraesCS5D01G005700 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ------------TACTCTTACGTAATACCA----AATCCCCTCTATGAGT chr5A_973 -------------------------------------------------- chr5A_986 ------------TACTTTTACGTAATATCA----AATCCACTCTATGAGT chr5A_986 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAGT chr5A_986 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAGT chr5A_986 -------------------------------------------------- chr3B_988 ------------TACTTTTACGTAATACCA----AATCCCCTCTATGAGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AGGAGGGAGTAATACTTTTACGTAATATCATGAAAATCCCTCTTT--AGC chr5A_2436 CGGAGGGAGTAATTCTTTTACATAATATCATGAAAGTCCCTCTTT--AGC chr4A_2436 CGGAGGGAGTAATTCTTTTACATAATATCATGAAAGTCCCTCTTT--AGC chr5A_3174 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAG- chr5B_3485 ------------TACTTTTACGTAATATCA----AATCCCCTCTATGAGT chr5B_3819 ------------TACTTTTACGTAATATCATGAAAATCCCCTCTATGAGC chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCC-TTTCTGAACT chr5D_1_TraesCS5D01G005700 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCC-TTTCTGAACT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTTTGTCAACTACTATGAACGATTCATCCCCGTTGGGCC-TTTCTGAACT chr5A_973 -------------------------------------------------- chr5A_986 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCC-TTTCTGAACT chr5A_986 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCC-TTTCTGAACT chr5A_986 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCC-TT-CTGAACT chr5A_986 ----------------------------------------TT-CTGAACT chr3B_988 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCCTTT-CTGAACT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATTTGTCAACTATTATGAATGATCCATCCCCGTTGGGCCTTT-CTGAAGC chr5A_2436 ATTTGTCAACTACTATGAATGATTCATCCCCGTTGGGCC-TTTCTAAAGT chr4A_2436 ATTTGTCAACTACTATGAATGACTCATCCCCTTTGGGCCTTT-CTAAAGT chr5A_3174 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCCTTT-CTAAACT chr5B_3485 TTTTGTCAACTACTATGAACGATTCATCCCTGTTGGGCCTTT-GTGAACT chr5B_3819 TTTTGTCCACTACTATGAATGATTCATCCCTGTTGGGCCTTT-CTAAACT chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TTAA-CACGTT- chr5D_1_TraesCS5D01G005700 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TTAA-CACGTT- chr5B_1 --------------ATTTGTCATTATCGTGGAAGTTC-TTGA-CGGACT- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TTAA-CACGTT- chr5A_973 -------------------------------------------------- chr5A_986 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TA-A-CATGTT- chr5A_986 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TA-A-CATGTT- chr5A_986 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TA-A-CATGTT- chr5A_986 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TA-A-CATGTT- chr3B_988 CTATTTGAATCAAAATATTTAATTATTATTGATTTTTCTA-A-CACGTT- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTATTTGAATCAAAATAATTGGTTATTGTTGTGTTTT-TTGA-CATGTTA chr5A_2436 CTATTTGAATCAAT-TAATTGGTTATTGTTGTGTTTT-TTGA-CATGTTA chr4A_2436 CTATTTGAATCAAT-TAATTGGTTATTGTTGTGTTTT-TTGA-CATGTTA chr5A_3174 CTATTTGAATCAAAATATTTCATTATTGTTGATTTTT-TA-A-CATGTT- chr5B_3485 CTATTTGAATCAAAATATTTGATTATTGTTGATTTTT-TTAA-CACATT- chr5B_3819 CTATTTGAATCAAAATATTTGGTTATTGTTGAATTTT-TTTAACGCGTT- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5D_1_TraesCS5D01G005700 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5B_1 CGACCCCAACAGTGAGTAAAAACATGTCTGTGGACGAGTAC--------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5A_973 -------------------------------------------------- chr5A_986 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5A_986 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5A_986 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5A_986 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr3B_988 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AGATAGAAGCTCAATTCCACCAAAGATTGCTTACTCTGAAAGTTTTGTTC chr5A_2436 AGATAGAAGCTCGATTCCACCAAAGATTGCTTACTCTGAAAGTGTTATAC chr4A_2436 AGATAGAAGCTCGATTCCACCAAAGATTGCTTACTCTGAAAGTGTTATAC chr5A_3174 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5B_3485 AGATGGAAGCCTGGTTCCACCAAAGAT----------------------- chr5B_3819 TGATAGAAGCTGGATTCCAACAAAGAT----------------------- chr5A_4058 ----------------------AAAAT----------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ---------------------------ATGTTAAATG---ATTATCTGAT chr5D_1_TraesCS5D01G005700 ---------------------------ATGTTAAATG---ATTATCTGAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ---------------------------ATGTTAAATG---ATTATCTGAT chr5A_973 -------------------------------------------------- chr5A_986 ---------------------------ATGTTAAATGATGATTATCTGAT chr5A_986 ---------------------------ATGTTAAATGATGATTATCTGAT chr5A_986 ---------------------------ATGTTAAATGATGATTATCTGAT chr5A_986 ---------------------------ATGTTAAATGATGATTATCTGAT chr3B_988 ---------------------------ATGTTGAAG---GATTATCTGAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTGC-CCCTGTATACCTTGCTTGAAATACATTAAATGA---TTATCTGAT chr5A_2436 TTGCGCCCTGTATACCTTGCTTGAAATATATTAAATGA---TTATCTGAT chr4A_2436 TTGCGCCTTGTATACCTTTCTTGAAATATATTAAATGA---TTATCTGAT chr5A_3174 ---------------------------ATGTTAAATGATGATTATCTGAT chr5B_3485 ---------------------------ATGTTAAATGA---TTATCTGAT chr5B_3819 ---------------------------ATGTTTAGTGA---TTATCTAAT chr5A_4058 ---------------------------ATTCTAAATGA---TTATCTGGT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTGACGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5D_1_TraesCS5D01G005700 TTGACGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTGACGTAGGCACATCGCCAGGCCTCATCTTGGATTGA--TGTTTAAGGA chr5A_973 -------------------------------------------------- chr5A_986 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5A_986 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5A_986 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5A_986 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr3B_988 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTGATGTAGGCATTTCGCCCGGCCCCATCTTGGAATGA--CGTTTAAGGC chr5A_2436 TTGATGTAGGCATTTCGCCCGGCCCCATCTTGGAATGA--CGTTTAACGC chr4A_2436 TTGATGTAGGCATTTCGCCCGGCCCCATCTTGGAATGA--CGTTTAAGGC chr5A_3174 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGA--TGTTTAAGGA chr5B_3485 TTGATGTAGGCACATCGCCCGGCCTCATCTTGGAATGATGTGTTTAAGGA chr5B_3819 CTGATGTAGCCACATCACCCGGCCCCATCTTGGAATGA--TGTTTAAAGA chr5A_4058 TTGATGTAGGCATTTCGCCTGGCCCCAACTTGGAATGA--CGTTTAAGGC chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTAAGTTTA chr5D_1_TraesCS5D01G005700 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTAAGTTTA chr5B_1 ------------------------------CAAGTTATGGCTGCATTTAC chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTAAGTTTA chr5A_973 -------------------------------------------------- chr5A_986 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTTTA chr5A_986 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTTTA chr5A_986 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTTTA chr5A_986 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTTTA chr3B_988 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTAAGTTTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CATCGAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTATA chr5A_2436 CATCGAACTTCTAGAACCTTCTCATGTTGACATGTTATGGCGTATGTATA chr4A_2436 CATCGAACTTCTAGAACCTTCTCATGTTGACATGTTATGGCGTATGTATA chr5A_3174 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTATGTTTA chr5B_3485 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTAAGTTTA chr5B_3819 CATCAAACTTCTAGAACCTGCTCATGTTGACATGTTATGGCGTACGTTTA chr5A_4058 CATCGAACTTCTAGAACCTGCTCATGCTGACATGTTATGGCATATGTTTA chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5D_1_TraesCS5D01G005700 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5B_1 ATACTCCGTCGCCTCCTCGGCCCGGCAAACGAGATGGCAAGCTTACTTGT chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ACATTGATGATGGTCTTATTGTTGAAGAGGTAGG---TAATGACTTCCTG chr5A_973 -------------------------------------------------- chr5A_986 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5A_986 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5A_986 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5A_986 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr3B_988 ACATTGATGATGGTCTTATTGTTGAAGAGGTAGG---TAATGACTTCCTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ACATTGATGACGGTCTTGTTGTTCAAGAGGTAGG--GTAATGATTTCCTC chr5A_2436 ACATTGATGACGGTCTTGTCGTTCAAGAGGTAGGGTGTAATGATTTCCTC chr4A_2436 ACATTGATGACGGTCTTGTTGTTCAAGAGGTAGGGT--AATTATTTCCTC chr5A_3174 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5B_3485 ACATTGATGATGGTCTTATTGTTGAAGAGGTAGG---TAATGACTTCCTG chr5B_3819 ACATTGATGATGGTCTTATTGTTCAAGAGGTAGG---TAATGACTTCCTG chr5A_4058 ACATTGATGACGGTCTTGTTGTTCAAGAGGTAGGGT--AATGACTTCATG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AAAGTGCCCAATTTCTCATCTGTGTAAA-GTTAATTATT-GACGTTTGAA chr5D_1_TraesCS5D01G005700 AAAGTGCCCAATTTCTCATCTGTGTAAA-GTTAATTATT-GACGTTTGAA chr5B_1 GGTGGTAGCAGACGAGAGAGGCGC-------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AAAGTGCTCAATTTCTCATCTGTGTAAA-GTTAATAATT-GACGTTTGAG chr5A_973 -------------------------------------------------- chr5A_986 AAAGTGCTCAATTTCTCATCTGTGTAAAGGTTAATTATT-GACATTTGAA chr5A_986 AAAGTGCTCAATTTCTCATCTGTGTAAAGGTTAATTATT-GACATTTGAA chr5A_986 AAAGTGCTCAATTTCTCATCTGTGTAAAGGTTTATTATT-GACATTTGAA chr5A_986 AAAGTGCTCAATTTCTCATCTGTGTAAAGGTTTATTATT-GACATTTGAA chr3B_988 AAAGTGCTCAATTTCTCATCTGTGTAAA-GTTAATTATT-GACGTTTGAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GAGGTGCTCTATTTCTCATGTATGTAGTGGTTAATTATTTGGCAATTGAA chr5A_2436 GAGGTGCTCTATTTCTCATGCATGTAGTGGTTAATTATTTGGCAACTGAA chr4A_2436 GAGGTGCTCTATTTCTCATGCATGTAGTGGTTAATTATTTGGCAATTGAA chr5A_3174 AAAGTGCTCAATTTCTCATCTGTGTAAAGGTTAATTATT-GACATTTGAA chr5B_3485 AAAGTGCTCAATTTCTCATCTGTGTAAA-GTTAATTATT-GACGTTTGAA chr5B_3819 AAAGTGCTCAATTTCTCATTTGTGTAAAGGTTAATTATT-GACATTTGAG chr5A_4058 GAGGTGCTCAATTTCTCATGCATGTAGTGGTTAATTATTTGGCAATTGAA chr5D_6120 -------------------------------------------------- SNPs -------S------------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CCTTAGGTGTCGGGAGGATCTCCTGCTGAGAAATTTGGAATCCAAGAAGG chr5D_1_TraesCS5D01G005700 CCTTAGGTGTCGGGAGGATCTCCTGCTGAGAAATTTGGAATCCAAGAAGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CCTTAGGTGTCGGGAGGATCTCCTGTTGAGAAATTTGGAATCCAAAAAGG chr5A_973 -------------------------------------------------- chr5A_986 CATTAGGTGTCGGGAGGGTCGCCTGCTGAGAAATTTGGAATCCAAAAAGG chr5A_986 CATTAGGTGTCGGGAGGGTCGCCTGCTGAGAAATTTGGAATCCAAAAAGG chr5A_986 CATTAGGTGCCGGGAGGGTCGCCTGCTGAGAAATTTGGAATCCAAAAAGG chr5A_986 CATTAGGTGCCGGGAGGGTCGCCTGCTGAGAAATTTGGAATCCAAAAAGG chr3B_988 CCTTAGGTGTCGGGAGGATCTCCTGCTGAGAAATTTGGAATCCAAAAAGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CCCTAGGTGTCGAAAGGATCTAATGCTGAGATACTCGGAGTCCAAAAAGG chr5A_2436 ACCTAGGTGTCAAAAGGATCTAATGCTGAGATACTCGGAATCCAAAAAGG chr4A_2436 ACCTAGGTGTCAAAAGGATCTAATGCTGAGATACTCGGAATCCAAAAAGG chr5A_3174 CATTAGGTGTCGGGAGGGTCGCCTGCTGAGAAATTTGGAATCCAAAAAGG chr5B_3485 CCTTAGGTGTCAGGAGGATCTCCTGCTGAGAAATATGGAATCCAAA---- chr5B_3819 CATTGGGTGTCTGGAGGATCTCCTACTGAGAAATTTGGAATCCAAAAAGG chr5A_4058 CCCTGGGTGTCAAAGGGATCTAATGCTGAGATACTCGGAATCCAAAAAGG chr5D_6120 -------------------------------------------------- SNPs ---------------------------------------------S---- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -----------------------TGCTGAGAAATTTGGAATCCAAG---- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGATATTATTGAATCTTTCAGTGGAAAGCCTGTTTCTTCCACAATTGAGG chr5D_1_TraesCS5D01G005700 TGATATTATTGAATCTTTCAGTGGAAAGCCTGTTTCTTCCACAATTGAGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGATATTATTGAATCTTTCAGTGGAAAGCCTGTTTCTTCCACAATTGAGG chr5A_973 -------------------------------------------------- chr5A_986 TGATATTATCGAATCTTTCAATGGAAAGCATGTTTCTTCCACAATTGAGG chr5A_986 TGATATTATCGAATCTTTCAATGGAAAGCATGTTTCTTCCACAATTGAGG chr5A_986 TGATATTATCGAATCTTTCAATGGAAAGCCTGTTTCTTCCACAATTGAGG chr5A_986 TGATATTATCGAATCTTTCAATGGAAAGCCTGTTTCTTCCACAATTGAGG chr3B_988 TGATATTATTGAATCTTTCAGTGGAAAGCCTGTTTCTTCCACAATTGAGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TGATGTTATTGAATCTATCAACGGAAAACGTGTTTCTACCACAATTGAGG chr5A_2436 TGATGTTATTGAATCTATCAATGGGAAACGTGTTTCTACAACAATTGAGG chr4A_2436 TGATGTTATTGAATCTATCAATGGAAAACGTGTTTCTACAACAATTCAGG chr5A_3174 TGATATTATCGAATCTTTCAATGGAAAGCCTGTTTCTTCCACAATTGAGG chr5B_3485 -GATATTATTGAATCTTTCAGTGGAAAGCCTGTTTCTTCCACAATTGAGG chr5B_3819 TGATATTATTGAATCTTTCAACGGAAAGCCTATTTCTTCCACAATTGAGG chr5A_4058 TGATTTTATTGAATCTATCAATGGAAAACGTATTTCTACCACAATTGAGG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGAGTGAATTAGAGAGTTGTTAGGTAAACGAACTGAAAATAAATTTCATT chr5D_1_TraesCS5D01G005700 TGAGTGAATTAGAGAGTTGTTAGGTAAACGAACTGAAAATAAATTTCATT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGAGTGAATTAGAGATTTATTAGGTAAACGAACTGAAAATAAATTTCATT chr5A_973 -------------------------------------------------- chr5A_986 TGAGTGAATTAGAGATTTGTTAGGTAAACAAATTGAAAATAAATTTAATT chr5A_986 TGAGTGAATTAGAGATTTGTTAGGTAAACAAACTGAAAATAAATTTAATT chr5A_986 TGAGTGAATTAGAGATTTGTTAGGTAAACAAACTGAAAATAAATTTAATT chr5A_986 TGAGTGAATTAGAGATTTGTTAGGTAAACAAACTGAAAATAAATTTAATT chr3B_988 TGAGTGAATTAGAGATTTGTTAGGTAAACGAATTGAAAATAAATTTCATT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TGGGTGTATTAATGAG----------------GTGAAAATAAGTTATATT chr5A_2436 TGGGTGTATTAATGAG----------------GTGAAAATAAATTATATT chr4A_2436 TGGGTGTATTAATGAG----------------GTGAAAATAAATTATATT chr5A_3174 TGAGTGAATTAGAGATTTGTTAGGTAAACAAACTGAAAATAAATTTAATT chr5B_3485 TGAGTGAATTAGAGATTTGTTAGGTAAACAAACTGAAAATAAATTTCATT chr5B_3819 TGAGTGTATTAGAGATTTGTTGGGTAAACAAACTGAAAATAAATTTCATT chr5A_4058 TGGGTGTATTAATGAG----------------CTGAAAAGAAATTACATG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGTGTGATATTTAGTAGCTTCACGGTCTTGACTAGAATGTTTTC-GTTTC chr5D_1_TraesCS5D01G005700 TGTGTGATATTTAGTAGCTTCACGGTCTTGACTAGAATGTTTTC-GTTTC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TCTGTGAT-TTTAGTAGCTTCACGGTCTTGACTAGAATGTTTTC-GTTTC chr5A_973 -------------------------------------------------- chr5A_986 TGTGTGATATTTAGTAACTTCACGGTCTTGACTAGAATGTTTTT-GTTTC chr5A_986 TGTGTGATATTTAGTAACTTCACAGTCTTGACTAGAATGTTTTA-GTTTC chr5A_986 TGTGTGATATTTAGTAACTTCACGGTCTTGACTAGAATGTTTTT-GTTTC chr5A_986 TGTGTGATATTTAGTAACTTCACGGTCTTGACTAGAATGTTTTT-GTTTC chr3B_988 TCTGTGAT-TTTAGTAGCTTCACGGTCTTGACTAGAATGTTTTC-GTTTC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TGTGTGATAGTTGTTGGCTTCACGGTCTTGACTGCAATGTTTTTTCT--- chr5A_2436 TTTGTGATAGTTGTTGGCTTCACGGTCTTGACTGCAATATTTTTTCT--- chr4A_2436 TTTGTGATAGTTGTTGGCTTCACGGTCTTGACTGCAATGTTTTTTCT--- chr5A_3174 TGTGTGATATTTAGTAACTTCACGGTCTTGACTAGAATGTTTTT-GTTTC chr5B_3485 TCTGTGAT-TTTAGTAGCTTCACGGTCTTGACTAGAATGTTTTC-TTTTC chr5B_3819 TGTGTGATATTTAGTAGCTTCATGGTCTTGACTAGAATGGTTTTTGTTTC chr5A_4058 CGC--GATAGTTGGTGTCTTCATGGTCTTGACTGCAATGTTTTTTAT--- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTGCAATTATCAGCTGGAAAATACACTGATGAGCATATACAAGGGAACCT chr5D_1_TraesCS5D01G005700 CTGCAATTATCAGCTGGAAAATACACTGATGAGCATATACAAGGGAACCT chr5B_1 -----------------------------------TAAACAAGCGCACTT chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CTGCAATTATCAGCTGGAAAATACACTGATGAGCATATACAAGGGAACCT chr5A_973 -------------------------------------------------- chr5A_986 CTGCAATTATCAGTTGGAAAATACACTGATGAGCATATACAAGGGAACTT chr5A_986 CTGCAATTATCAGTTGGAAAATACACTGATGAGCATATACAAGGGAACTT chr5A_986 CTGCAATTATCAGTTGGAAAATACACTGATGAGCATATACAAGGGAACTT chr5A_986 CTGCAATTATCAGTTGGAAAATACACTGATGAGCATATACAAGGGAACTT chr3B_988 CTGCAACTATCAGCTGGAAAATACACTGATGAGCATATACAAGGGAACCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CTACAATTATCAGTTCGAAAATATGCTGATGAGCACATGCAAGGTCCGTT chr5A_2436 CTGCAATTATCAGTTCGAAAATATGCTGATGAGCACATGCAAGGTCCCTT chr4A_2436 CTGCAATTATTAGTTCGAAAATATGCTGATGAGCACATGCAAGGTCCCTT chr5A_3174 CTGCAATTATCAATTGGAAAATACACTGATGAGCATATACAAGGGAACTT chr5B_3485 ATGCAATTATCAGCTGGAAAATACACTGATGAGCATATACAAGGGAACCT chr5B_3819 CTACAATTATCAGTTGGAAAATACGCTGATGAGCATATACAAAGGCCCTT chr5A_4058 CTGCAATTATCAGTTGGAAAATACGCTGATGAGCACATGCAAGGGACCTC chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTGTATAT-ATGAGGG chr5D_1_TraesCS5D01G005700 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTGTATAT-ATGAGGG chr5B_1 TATCCATCGTCAAGGGATCTGA--------GCCGTTGTATAT-GTGGGGG chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAGATGCTGAAGTTCTTATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr5A_973 -------------------------------------------------- chr5A_986 TAGATGCTGAAGTTCGTATTTTTGTAAGTT-CATTTCTATAT-ATGAGGG chr5A_986 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr5A_986 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr5A_986 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr3B_988 TAGATGCTGAAGTTCATATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CAGGTGCTGAAGTTCATATTTCTGTAAGTA-CATTTCTATATCATAACAG chr5A_2436 CAGATGTTGAAGTTCATATTTCTGTAAGTA-CATTTCTATATCATAACAG chr4A_2436 CAGGTGTTGAAGTTCATATTTCTGTAAGTA-CATTTCTATATCATAACAG chr5A_3174 TAGATGCTGAAGTTCGTATTTCTGTAAGTT-CATTTCTATAT-ATGAGGG chr5B_3485 TAGATGCTGAAGTTTGTATTTCTGTAAGTTGCATTTCTATAT-ATGAGGG chr5B_3819 TAGAATCTGAAGTTCATATTTCTGTAAGTT-CATTTCTACAT-ATAAGGG chr5A_4058 CAGGTGCTGAAGTTCATATTTCTGTAAGT---------ATATCATAACGG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CGGTTTGCTTGATCCCGGCCATCCATTTATTTGTACCGAAGTATTATTAG chr5D_1_TraesCS5D01G005700 CGGTTTGCTTGATCCCGGCCATCCATTTATTTGTACCGAAGTATTATTAG chr5B_1 AGGCCATGAGCAATCGTAATGACCTTCC---------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CAGTTTGCTTGATCCCGGCCATCCATTTATTTGTACCGAAGTATTATTAG chr5A_973 -------------------------------------------------- chr5A_986 CGGTTTTCTTGATCCCGGCCATACATTTATTTGTACCGAAGTATTATTAG chr5A_986 CTGTTTTCTTGATCCCGGCCATACATTTATTTGTACCGAAGTATTATTAG chr5A_986 CGGTTTTCTTGATCCCGGCCATACATTTATTTGTACCGAAGTATTATTAG chr5A_986 CGGTTTTCTTGATCCCGGCCATACATTTATTTGTACCGAAGTATTATTAA chr3B_988 CGGTTTGCTTGATCCCGGCCATCCATTTATTTGTACCGAAGTATTATTAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CGGTTTGCTTGATCCCTGCCATCCATTTCTTTGTGCTGATGTATTATTAG chr5A_2436 CGGTTTGCTTGATCCCTGCCATCCATTTCTTTGTGCTGATGTATTATTAG chr4A_2436 AGGTTTGCTTGATCCCTGCCATCCATTTCTTTGTGCTGATGTATTATTAG chr5A_3174 CGGTTTTCTTGATCCCGGCCATACATTTATTTGTACCGAAGTATTATTAG chr5B_3485 CGGTTTGCTTGATCCCGGCCATCCATTTATTTGTACCGAAGTATTATTAG chr5B_3819 CGGTTTGCTTGATCCCGACCATCCATT-ATTTGTACGGACGTAATATTAG chr5A_4058 TGGTTTGCTTGATCCCTGCCATCCATTTCTTTGTACCGACGTATTATGAG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCTAACTCGATAGGTTGGGGT chr5D_1_TraesCS5D01G005700 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCTAACTCGATAGGTTGGGGT chr5B_1 ----------------------------------CTCCATCGGTCATGGA chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCTAACTCCATAGGTTGGGGT chr5A_973 -------------------------------------------------- chr5A_986 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCAAACTCCGTAGGTTGGGGT chr5A_986 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCAAACTCCGTAGGTTGGGGT chr5A_986 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCAAACTCCGTAGGTTGGGGT chr5A_986 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCAAACTCCGTAGGTTGGGGT chr3B_988 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCTAACTCCATAGGTTGGGGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CAAAATGCTAGCACTAAGAGATTTGCTTCGCTAACTCCATAGGTTGGGGT chr5A_2436 CAAAATGCTAGCACTAAGAGATTTGCTTCGCTAACTCCATAGGTTGGGGT chr4A_2436 CAAAATGCTAGCACTAAGAGATTTGCTTCGCTAACTCCATAGGTTGGGGT chr5A_3174 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCAAACTCCGTAGGTTGGGGT chr5B_3485 CAAAATGCTAGCTCTAAGAGATGTGTTTGGCTAACTCCATAGGTTGGGGT chr5B_3819 CGAAGTGCTAGCTCTAAGAGATA--------TAACTCCATAGGTTGGGGT chr5A_4058 CACAATGCTAGCACTAAGAGATATGTTTTGCTAACTCCATAGGTTGGGGT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------S------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------GATAGGTTGGGGT forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTTTCACACACTCAAAGAACAACGGAGCACTGTAGACTTGACTGCAAAAT chr5D_1_TraesCS5D01G005700 GTTTCACACACTCAAAGAACAACGGAGCACTGTAGACTTGACTGCAAAAT chr5B_1 ATCGT--------------GAACGAAGCCAAGGC---------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTTTCACACACTCAAAGAACAACGGAGCACTGTAGACTTGACTGCAAAAT chr5A_973 -------------------------------------------------- chr5A_986 GTTTCACACACTCAAAGAACAATGGAGCACCATAGAGTTGACTGCAAAAT chr5A_986 GTTTCACACACTCAAAGAACAATGGAGCACCATAGAGTTGACTGCAAAAT chr5A_986 GTTTCACACACTCAAAGAACAATGGAGCACCATAGAGTTGACTGCAAAAT chr5A_986 GTTTCACACACTCAAAGAACAATGGAGCACCATAGAGTTGACTGCAAAAT chr3B_988 GTTTCACACACTCGAAGAACAACGGAGCACTGTAGACTTAACTGCAAAAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GTTTCACACACTCAAAAAAGAACGAAGCACCATAGAGTTGACCACAAATT chr5A_2436 GTTTCACACACTCAAAAAAGAACGAAGCACCATAGAGTTGACTGCAAATT chr4A_2436 GTTTCACACACTCAAAAAAGAATGAAGCACCATAGAGTTGACTGCAAATT chr5A_3174 GTTTCACACACTCAAAGAACAACGGAGCACCATAGAGTTGACTGCAAAAT chr5B_3485 GTTTCACACACTCAAAGAACAGCGGAGCACTGTAGACTTGACTGCAAAAT chr5B_3819 GTTTCACACACTCAAAGAACAACGAAGCACCGTAGAGCTGACTGCAAAAT chr5A_4058 GTTTCACACACTCAAAAAACAACGAAGCACCGTAGAGTTGACTTTAAAAT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 GTTTCACA------------------------------------------ forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TATCAGAACTTGGAGAGGTTATTACAAG--AGGTACACATCTCCTCTTTT chr5D_1_TraesCS5D01G005700 TATCAGAACTTGGAGAGGTTATTACAAG--AGGTACACATCTCCTCTTTT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TATCAGAACTTGGAGAGGTTATTACAAG--ATGTACACATCTCCTCTTTT chr5A_973 -------------------------------------------------- chr5A_986 TATCAGAACTTGGAGAAGTTATTACAAG--AGGTGCAAATCTCCTTTTTT chr5A_986 TATCAGAACTTGGAGAAGTTATTACAAG--AGGTGCAAATCTCCTTTTTT chr5A_986 TATCAGAACTTGGAGAAGTTATTACAAG--AGGTGCAAATCTCCTTTTTT chr5A_986 TATCAGAACTTGGAGAAGTTATTACAAG--AGGTGCAAATCTCCTTTTTT chr3B_988 TATCAGAACTTGGAGAGGTTATTAAAAG--AGGTACACATCTCCTCTTTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATCCGAACTTGGAGAAGTCATTACAAGCTAGGTACACATCTCCTCTTTT chr5A_2436 TATCCGAACTTGGAGAAGTCATTACAAGCTAGGTACACATCTCCTCTTTT chr4A_2436 TATCCGAACTTGGAGAAGTCATTACAAGCTAGGTACACATCTCCTCTTTT chr5A_3174 TATCAAAACTTGGAGAAGTTATTACAAG--AGGTGCAAATCTCCTTTTTT chr5B_3485 TATCAGAACTTGGAGAGGTTATTACAAG--AGGTACACATCTCCTCTTTT chr5B_3819 TATCTAAACTTGGAGAAGTTATTACAAG--AGGTACACATCTCCTCTTTT chr5A_4058 TATCAGAACTTGGAGAAGTTATTACAAGCTAGGTACACATCTCCTCTTTT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AACTTGCCCCATCTACAGATTATTATTTCAA------------------- chr5D_1_TraesCS5D01G005700 AACTTGCCCCATCTACAGATTATTATTTCAA------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AACTTGCCCCATCTACAGATTATTATTTCAA------------------- chr5A_973 -------------------------------------------------- chr5A_986 AACTAGCCCCGTCTACAGATTATTATGTCAATTCTCAAGCATGTATGTTC chr5A_986 AACCAGCCCCGTCTACAGATTATTATGTCAATTCTCAAGCATGTATGTTC chr5A_986 AACTAGCCCCGTCTACAGATTATTATGTCAATTCTCAAGCATGTATGTTC chr5A_986 AACTAGCCCCGTCTACAGATTATTATGTCAATTCTCAAGCATGTATGTTC chr3B_988 AACTTGCCCCATCTACAGATTATTATTTCAA------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AATTAGCCCCACCCACAAATTATTATTTCAATTCTCTAGTATTATATTCC chr5A_2436 AATTAGCCCCACCCACAAATTATTATTTCAATTCTCTAGTATTATATTCC chr4A_2436 AATTAGCCCCACCCACAAATTATTATTTCAATTCTCTAGTATTATATTCC chr5A_3174 AACTAGCCCCGTCTACAGATTATTATGTCAATTCTCAAGCATGTATGTTC chr5B_3485 AACTTGCCCCATCTACAGATTATTATTTCAA------------------- chr5B_3819 AACTAGCCCCATCTACATATTATTAT------------------------ chr5A_4058 AACTAGCCCAATCTACAGATTATTATTTCAATTCTCTAGTATGTATATTC chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------------------ATCCAGACATAATGCTATCGCTAAGT chr5D_1_TraesCS5D01G005700 ------------------------ATCCAGACATAATGCTATCGCTAAGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ------------------------ATCCAGACATAATGCTATCGCTAAGT chr5A_973 -------------------------------------------------- chr5A_986 TATTTTTTTTGTAC-ACACCTATTATCCAGACAGAATGCTATCACTAAGT chr5A_986 TATTT-TTTTGTAC-ACACCTATTATCCAGACAGAATGCTATCACTAAGT chr5A_986 TATTT-TTTTGTAC-ACACCTATTATCCAGACAGAATGCTATCACTAAGT chr5A_986 TATTT-TTTTGTAC-ACACCTATTATCCAGACAGAATGCTATCACTAAGT chr3B_988 ------------------------ATCTAGACATAATGTTATCGCTAAGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 A--TT-TTTTGCAG-ATAATTATTATCCAGATACAGTGCTAGCACTAAGT chr5A_2436 A--TT-TTTTGCAG-ATAATTATTATACAGATACAGTGCTAGCACTAAGT chr4A_2436 A--TT-TTTTGCAG-ATAATTATTATCCAGATACAGTGCTAGCACTAAGT chr5A_3174 TATTT-TTTTGTAC-ACAACTATTATCCAGACAGAATGCTATCACTAAGT chr5B_3485 ------------------------ATCCAGACATAATGCTATCGCTAAGT chr5B_3819 -------------------------------------------------- chr5A_4058 CATTT-TATGTAGATATAATTATTATCCAGATATAGTGCTAGCACTAAGT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATGCAAGCTCATGTGCATTGTGCAATACACTCTTACATGACACACATGTG chr5D_1_TraesCS5D01G005700 ATGCAAGCTCATGTGCATTGTGCAATACACTCTTACATGACACACATGTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ATGCAAGCTCATGTGCATTGTGCAATACACTCTTACATGACACACATGTG chr5A_973 -------------------------------------------------- chr5A_986 ATGCAAGCTCATGTGCATTGTGCAATACATTCTTACATGACACACATCTG chr5A_986 ATGCAAGCTCATGTGCATTGTGCAATACATTCTTACACGACACACATCTG chr5A_986 ATGCAAGCTCATGTGCATTGTGCAATACATTCTTACATGACACACATCTG chr5A_986 ATGCAAGCTCATGTGCATTGTGCAATACATTCTTACATGACACACATCTG chr3B_988 ATGCAAGCTCATGTGCATTGTGCAATACACTCTTACATGACACACATGTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATGTAAGCTTATGTGCGTTGTGCAATACACTCTTACGTGAAACCCATGTG chr5A_2436 ATGTAAGCTTATGTGCGTTGTGCAATACACTCTTACGTGAAACCCATGTG chr4A_2436 ATGTAAGCTTATGTGTGTTGTGCAATACACTCTTACGTGAAACCCATGTG chr5A_3174 ATGCAAGCTCATGTGCATTGTGCAATACATTCTTACATGACACACATCTG chr5B_3485 ATGCAAGCTCATGTGCATTGTGCAATACACTCTTACATGACACACATGTG chr5B_3819 -------------------------------------------------- chr5A_4058 ATGCAAGTTTATGTGCATTGTGCGATACACTCTTATGTGACACCAATGTG chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ATGCCTAAAATATCACACCAAACCATACAGTATTCTGATATTTTGCAAGT chr5D_1_TraesCS5D01G005700 ATGCCTAAAATATCACACCAAACCATACAGTATTCTGATATTTTGCAAGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ATGTCTAAAATATCACACCAAACCATACAGTATTCTGATATTTTGCAAGT chr5A_973 -------------------------------------------------- chr5A_986 ATGTGTAAAATATCACACCAAACCATACACTATTATGATATTTTGGAAGT chr5A_986 ATGTGTAAAATATCACACCAAACCATACACTATTCTGATATTTTGGAAGT chr5A_986 ATGTGTAAAATATCACACCAAACCATACACTATTATGATATTTTGGAAGT chr5A_986 ATGTGTAAAATATCACACCAAACCATACACTATTCTGATATTTTGGAAGT chr3B_988 ATGTCTAAAATATCACACCAAACCATACAGTATTATGATATTTTGCAAGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 ATGTTTAAAATATCATACCACACCATAAAATATGCTGATATTTTGGAAGT chr5A_2436 ATGTTTAAAATATCATACCACACCATAAAATATGCTGATATTTTGGAAGT chr4A_2436 ATGTTTAAAATATCATACCACACCATAAAATATGCTGATATTTTGGAAGT chr5A_3174 ATGTGTAAAATATCACACCAAACCATACACTATTCTGATATTTTGGAAGT chr5B_3485 ATGTCTAAAATATCACACCAAACCATACAGTATTCTGATATTTTGCAAGT chr5B_3819 -------------------------------------------------- chr5A_4058 ATGTTTAAAATATCATACCACACACCATAAAGTACGCT--------AAGT chr5D_6120 -------------------------------------------------- SNPs ---S---------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTACTGTTTTGGTAAGTAGGTGGTGTGTAGCAAG---------------- chr5D_1_TraesCS5D01G005700 TTACTGTTTTGGTAAGTAGGTGGTGTGTAGCAAG---------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTACTGTTTTGGTAAGTAGGTGGTGTGTAGCAAG---------------- chr5A_973 -------------------------------------------------- chr5A_986 TTACGATTTTTATAAACAGGTGGTGTGCAGCAAG---------------- chr5A_986 TTACGATTTTTATAAACAGGTGGTGTGCAGCAAG---------------- chr5A_986 TTACGATTTTTATAAACAGGTGGTGTGCAGCAAG---------------- chr5A_986 TTACGATTTTTATAAACAGGTGGTGTGCAGCAAG---------------- chr3B_988 TTATTGTTTTGGTAAGTAGGTGGTGTGTAGCGAG---------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTATGGTTTTCGTAAATAGATGGTGTGCAGCAG----------------- chr5A_2436 TTATGGTTTTCGTAAATGGGTGGTGTGCAGCAGGT--------------- chr4A_2436 TTATGGTTTTCGTAAATAGGTGGTGTGCAGCAGGT--------------- chr5A_3174 TTGCGATTTTGATAAACAGGTGGTGTGCAGCAAG---------------- chr5B_3485 TTACTGTTTTGGTAAGTAGGTGGTGTGTAGCAAGTAAGGCCCCGTAAGCT chr5B_3819 -------------------------------------------------- chr5A_4058 TTATGGTTTTCGTAAATATGTTGTGTGCAGCAAGT--------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 CACTGGCTTCCCAAACAAGACAGCTTCTCGTGGAGCCAGCGCTAGCTAGC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 TTCTCCTGGAGCCAACGATCGTTCGGTAGCATTGCTGCAGCAGCTGCTTC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 TTCATGGGCTGGCAGCCCAGGAAAGGAGGATGAAACCCATTCGGGTTGGT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 AGATGGATGGCCCAGTTCAGTGGTAAAGGCAGGCTGTAGCGACAGAAAAC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 ATTTCGTGAGGCAGTTCGGAAGGGCACTCTCGTGTAATTTCTAGCAACTT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 CCACTTCTCGCTTTAGCGAAGCTACGCTTCCGCTGCTCCCAAAAATTTGC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 ACTGTGGGGTTCACATTCTCCAGGAGCTCGGGGTGGCTTCTCGAAGCTAA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 CTCTTTCGGGGTGGCTTCTCTCGGCTCCTTCGGGAAGCTGGCTCGTGGAG chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -----------------TAAGGCCCCGTAAGCTCACTGGCTTCCCAAACG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -----------------T-------------------------------- chr5B_3485 AGCTTCCGAACGGAGCCT-------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AGACAGCTTCTCGTGGAGCCAGCGCTAGCTAGCTTCTCCTGGAGCCAACG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ATCGTTCGGTAGCATTGCTGCAGCAGCTGCTTCTTCATGGGCTGTAGCGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CAGAAAACGTTTCGTGAGGCACTTCGGAAGGGCACTCTCGTGTAATTTCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AGCAACTTCCACTTCTCGCTTTAGCGAAGCTACGCTTCCGCTGCTCCGAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AAATTGCACTGCGGGGTTCACGTTCTCCAGGAGCTGGCTTCTCGAAGCTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ACTCTTTCGGGGTGGCTTCTCTCGGCTCCTTCGGGAAGCTGGCTCGTGGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------------TAAGGCCCCGTTCGG----------------- chr5D_1_TraesCS5D01G005700 ------------------TAAGGCCCCGTTCGG----------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ------------------TAAGAGCATTACTAGTAGTACCCCTAAACCCT chr5A_973 -------------------------------------------------- chr5A_986 ------------------TA------------------------------ chr5A_986 ------------------TA------------------------------ chr5A_986 ------------------TA------------------------------ chr5A_986 ------------------TA------------------------------ chr3B_988 GAGCTTCCGAAAGGAGCCTA------------------------------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------A------------------------------ chr5B_3485 -------------------A------------------------------ chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------------------SS-SSSSSSS------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 ----------GTAGCAAGTAAGGCCCCGTT-------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CAAACCCTCAGTAGAACCCCTAAACCCTCAAACCCTTATGAGGGTTTGAG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 --------------------------------------AAGCTCACTGGC chr5D_1_TraesCS5D01G005700 --------------------------------------AAGCTCACTGGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GGTTTAGGGGTACTACTAGTAATGCTCGAAGGCCCCGTAAGCTCACTGGC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTCCCAAACGAGACAGCTTCTCGTGGAGCCAGCGCTAGCTAGCTTCTCCT chr5D_1_TraesCS5D01G005700 TTCCCAAACGAGACAGCTTCTCGTGGAGCCAGCGCTAGCTAGCTTCTCCT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTCCCAAACGAGACAACTTCTCGTGGAGCCAGCGCTAGCTAGCTTCTCCT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ---------------S---------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGAGCCAACGATCGTTCGGTAGC--------------------------- chr5D_1_TraesCS5D01G005700 GGAGCCAACGATCGTTCGGTAGC--------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GGAGCCAACGATCGTTCGGTAGCATTGCTACTCACTCTGTGCGTTTGGTT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TATTTGGTTTACATGGTTTGGTTTATACGGTTTTTTAGTTTGTACGGTAT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAATACTTCGGTAAATACGGTATGAAATTAAAATACGGTTCGGTTTCGGT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ATATACCAAATTATTTCGGTATGGTTTCGGTATATACCATAATAACCAAA chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTTGACACGAATTTGAAAATGACGTAATAACAATTTACAAATTTATGACC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CAAAACACATACTATTTTACACAAATAGTATATAACTATATATACAAGTA chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TATATGCATGAATGGATTTATCCCTTGATAGTTATGGACGTTCTTAGCAT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTTTTAAAGAGAAAAATGACTATGTTACGAGAAAATGTACGTGCTTGGCA chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ATGAATTTGACGCATGTAGAAGAAAAATGATAACTTGTATGGTTGTTCGC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 CTTAAGAAATATAAATTTATTTTTTACTTCGGTTTATTCGGTTAACCATT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TGGTTTTTTGGTATATACCATAAAAACCAAAGTTCAAAACGGTATGAAAA chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTCCATACGATATCAAAACCATAAACCATAAAAACCGTAAAATTGGTTTG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GTTCGGTTAATTTGCGGTATGGTTTTTCGGTTCGGTTTCAAAATGCACGG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -----ATTGCTGGAGCAGCTGCTTCTTCATGGGCTGGCAGCCCAGGAAAG chr5D_1_TraesCS5D01G005700 -----ATTGCTGGAGCAGCTGCTTCTTCATGGGCTGGCAGCCCAGGAAAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AGTGAATTGCTGCAGCAGATGCTTCTTCATGGACTGGCAGCCCAGGAAAG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ------------S-----S-------------S----------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GAGGATGAAGCCCATTCGGGTTGGTAGATGGATGGCCCAGTTCAGTGGTA chr5D_1_TraesCS5D01G005700 GAGGATGAAGCCCATTCGGGTTGGTAGATGGATGGCCCAGTTCAGTGGTA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TAGGATGAAGCCCATTCGGGTTGGTACATGGATGGCCCAGTTCAGTGGTA chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs S-------------------------S----------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 --------------------------GATGGATGGCCCAGTTCAGT---- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AAGGCAGGCTGTAGCGACAGAAAACGCTTCGTGAGGCACTTCGGAAGGGC chr5D_1_TraesCS5D01G005700 AAGGCAGGCTGTAGCGACAGAAAACGCTTCGTGAGGCACTTCGGAAGGGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 AAGGCAGGCTGTAGCGACAGAAAACGTTTCGTGAGGCACTTCGGAAGGGC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs --------------------------S----------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ACTCTCGTGTAATTTCTAGCAACTTCCACTTCTCGCTTTAGCGAAGCTAC chr5D_1_TraesCS5D01G005700 ACTCTCGTGTAATTTCTAGCAACTTCCACTTCTCGCTTTAGCGAAGCTAC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 ACTCTCGTGTAATTTCTAGCAACTTCCACTTCTCGCTTTAGCGAAGCTAC chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GCTTCCGCTGCTCCGAAAAATTGCACTGCGGGGTTCACGTTCTCCAGGAG chr5D_1_TraesCS5D01G005700 GCTTCCGCTGCTCCGAAAAATTGCACTGCGGGGTTCACGTTCTCCAGGAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GCTTCCGCTGCTCCGAAAAATTGCACTGCGGGGTTCACGT---------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------------------------------------SSSSSSSSSS forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTGGCTTCTCGAAGCTAACTCGTTCGGGGTGGCTTCTCTTGGCTCCTTCG chr5D_1_TraesCS5D01G005700 CTGGCTTCTCGAAGCTAACTCGTTCGGGGTGGCTTCTCTTGGCTCCTTCG chr5B_1 -----------AAGTGCAGGCGTTCTCCATGGCTTCCCTCGTCTTCTTTT chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 --GGCTTCTCGAAGCTAACTCTTTCGGGGTGGCTTCTCTCGGCTCCTTCG chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs SS-------------------------------------S---------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGAAGCTGGCTCGTGGAGAGCTTCCGAACGGAGCCTAAGTT--------- chr5D_1_TraesCS5D01G005700 GGAAGCTGGCTCGTGGAGAGCTTCCGAACGGAGCCTAAGTT--------- chr5B_1 TGTCTTTGATGGTC------------------------------------ chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 GGATGCTGGCTCGTGGAGAGCTTCCGAACGGAGCCTAAATT--------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------AG----------- chr5A_986 -------------------------------------AG----------- chr5A_986 -------------------------------------AG----------- chr5A_986 -------------------------------------AGTT--------- chr3B_988 -------------------------------------AGTT--------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 --------------------------------------GTT--------- chr5A_2436 ----------------------------------------TGTGGAGAAC chr4A_2436 ----------------------------------------T--------- chr5A_3174 -------------------------------------AGTT--------- chr5B_3485 -------------------------------------AGTT--------- chr5B_3819 -------------------------------------------------- chr5A_4058 ----------------------------------------T--------- chr5D_6120 -------------------------------------------------- SNPs ---S---------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -----------------------GTAGAGAACAGACTTCATCCATGTTTT chr5D_1_TraesCS5D01G005700 -----------------------GTAGAGAACAGACTTCATCCATGTTTT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -----------------------GTAGAGAACAGGCTTCATCCATGTTTT chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -----------------------GTACAGAACAGACTCCACCCATGTTTT chr3B_988 -----------------------GTAGAGAACAGACTTCATCCATGTTTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -----------------------GTGGAGAACAGACTTCATCCATGTTGT chr5A_2436 AGACTTCTTTTTTTTTACGGGGAGTGGAGAACAGACTTCATCCATGTTTT chr4A_2436 -------------------------------------------------- chr5A_3174 -----------------------GTACAGAACAGACTTCACCCATGTTTT chr5B_3485 -----------------------GTAGAGAACAGACTTCATCCATGTTTT chr5B_3819 -------------------------------------------------- chr5A_4058 -----------------------GTGGAGAACAATCTTCATCCATGTTTT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTTTACCAAAGTGTCT------------------------------GGG- chr5D_1_TraesCS5D01G005700 TTTTACCAAAGTGTCT------------------------------GGG- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 TTTTACCAAAGTGT------------------------------------ chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 TTT-ACCAAAGTATCCATATTCCATTTGTAGACTTGGAAGTTTTAGGAT- chr3B_988 TTTTACCAAAGTGTTCATCTTCCATTTGTAGACTTGGAAGTTTTTGGAA- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTTTACCCAAGCATCCATCTTCCAGTTGTAGACTTGGAAGTTTTTGGGTT chr5A_2436 TTT-ACCCTAGCATCCATCTTCCATTTGTAGACTTGGAAGTTTTTGGGT- chr4A_2436 ---------------------------GTAGACTTCCAAGTTTTTGGGT- chr5A_3174 TTTTACCAAAGTGTCCATATTCCATTTGTAGACTTGGAAGTTTTAGGAT- chr5B_3485 TTT-ACCAAAGTGTCCATCTTCCATTTGTAGACTTGGAAGTTTTTGGAA- chr5B_3819 -------------------------------------------------- chr5A_4058 TTT-AGCCAAGCATCCATCTTCCATATGTAGACTTGGGAGTTTTAGGAT- chr5D_6120 -------------------------------------------------- SNPs ---------------S--------------------------------S- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 --TTTGTGGTGCAAGAGATGCATGTCTGGGTTTGTGGT------------ chr5D_1_TraesCS5D01G005700 --TTTGTGGTGCAAGAGATGCATGTCTGGGTTTGTGGT------------ chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 --TTTTTGGAACAAGAGATGCATGTCTGGGTTTTGT------------GG chr3B_988 --TTTTTGGAACAAGAGATGCATGTCTGGGTTTGTGGT------------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TTTTTTTGGAACAAGAGATGCATGTTTGTGCTTGTAGGTTTGTTGATGGG chr5A_2436 --TTTTTGGAACAAGAGATGCATGTCTGTGCTTGTAGGTTTGTTGACGGG chr4A_2436 --TTTTTGGAACAAGAGATGCATGTCTGTGCTTGTAGGTTTGTTGATGGG chr5A_3174 --TTTTTGGAACAAGAGATGCATGTCTGGGTTTTGT------------GG chr5B_3485 --TTTTTGGAACAAGAGATGCATGTCTGGGTTTGTCGT------------ chr5B_3819 -------------------------------------------------- chr5A_4058 --TTTCTCAAACAAGAGATGCATGTCTGTGCTTGT--------------- chr5D_6120 -------------------------------------------------- SNPs -----S---SS--------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -GCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAATATT chr5D_1_TraesCS5D01G005700 -GCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAATATT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 CACTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAACATT chr3B_988 -GCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAATATT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CGCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGCGGATTAAATATT chr5A_2436 CGCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATACAGATTAAATATT chr4A_2436 CGCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATACAGATTAAATATT chr5A_3174 CGCTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAACATT chr5B_3485 -GTTAACTTTGAGTTGTGTGACATTTTGCAAAGAATGTGGATTAAATATT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GTTTGCATGCTTGCTCTCAGTTTTCTTTTTGGATATAGATACAAAACATT chr5D_1_TraesCS5D01G005700 GTTTGCATGCTTGCTCTCAGTTTTCTTTTTGGATATAGATACAAAACATT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 GCTTTCACGTTTGCTCTTAGTTTTCTTTCTGGATAT-------------- chr3B_988 GTTTGCACGCTTGCTCTCAGTTTTCTTTTTGGATATAGATACAAAACATT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GCTTGCATGTTCGCTCTCCGTGTTCTTTTTGGATGGGAATACAAAACATT chr5A_2436 GATTGCATGTTCACTCTCCGTTTTCTTTTTGGATGGGAATACAAAACATT chr4A_2436 GCTTGCATGTTCACTCTCTGTTTTCTTTTTGGATGGGAATACAAAACATT chr5A_3174 GCTTTCACGTTTGCTCTTAGTTTTCTTTCTGGATATGGGTACAAAACATT chr5B_3485 GTTTGCACGCTTGCTCTCAGATTTCTTTTTGGATATAGATACAAAACATT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CGCCTTGAGATAGGTGTTTTG-CAAGCAAAAGT-AGGCTTGGTTATTTGA chr5D_1_TraesCS5D01G005700 CGCCTTGAGATAGGTGTTTTG-CAAGCAAAAGT-AGGCTTGGTTATTTGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CGCCTTGAGAGAGGTGTTTTG-CAAGCAAAAGT-AGGCTTGGTTATTTGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CGCCTTGAGAGAGGTGGTTTG-CATGCAAAAGGAAGGATTGTTTATTTGG chr5A_2436 CGCCTTGAGAGAGGTGGTTTG-CATGCCAAAGA-GGGATTGTTTATTTGA chr4A_2436 CGCCTTGAGAGAGGTGGTTTG-CATGCCAAAGA-GGGATTGTTTATTTGA chr5A_3174 CGCCTTGAGAGAGGTGTTTTGACAAGCAAAAGT-AGGCTTGGTTATTTGA chr5B_3485 CGCCTTGAGAGAGGTGTTTTG-CAAGCAAAAGT-AGGCTTGGTTATTTGA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs ----------S--------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TACTCATGTTATGTTGTTATTTGTTACAGGTCCTACAGACTCTTGAACTG chr5D_1_TraesCS5D01G005700 TACTCATGTTATGTTGTTATTTGTTACAGGTCCTACAGACTCTTGAACTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TACTCATGTTATGTTGTTATTTGTTACAGGTCCTACAGACTCTTGAACTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 CACTCATTCTGTGTTATAATTCGTCACAGGTCCT------------ACAG chr5A_2436 CACTCATTCTGTGTTATAATTCGTCACAGGTCCT------------ACAG chr4A_2436 CACTCATTCTGTGTTATAATTCGTCACAGGTCCT------------ACAG chr5A_3174 TACTCATGTTGTGTTATTATTTATTACAGGTTCTACAGACTCTTGAACTG chr5B_3485 TACTCATGTTGTGTTGTAATTTGTTACAGGTCCTACAGACTCTTGAACTG chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GCTGCCAGGTCGAGGAGGGATGTTTCTATAGTGTGG-------------- chr5D_1_TraesCS5D01G005700 GCTGCCAGGTCGAGGAGGGATGTTTCTATAGTGTGG-------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GCTGCCAGGTCGAGGGGGGATGTTTCTATAGTGTGG-------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GCTGCCAGATTGAGGACGGATGTTTATATAGTGTGGTATACTATGATGGA chr5A_2436 GCTGCCAGATTGAGGACGGATGTTTCTATAGTGTGGTATACTATGATGGA chr4A_2436 GCTGCCAGATTGAGGACGGATGTTTCTATAGTGTGG-------------- chr5A_3174 GCTGCTCGGTTGAGGAGGGATGTTTGTATAGTGTGG-------------- chr5B_3485 GCTGTCAGGTCGAGGAGGGATGTTTCTATAGTGTGG-------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------C---------------------------CA------- chr5D_1_TraesCS5D01G005700 -------------C---------------------------CA------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------C---------------------------CA------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TACTTACCTGTGAC---------------------------CATATCTAG chr5A_2436 TACTTACCTGTGAC---------------------------CA------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------CTTACTGTGATACATGCTTACGTGTGACCA------- chr5B_3485 -------------C---------------------------CA------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------CATGTAGTACTATAGATATATTAGA chr5D_1_TraesCS5D01G005700 -------------------------CATGTAGTACTATAGATATATTAGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------CATGTAGTACTATAGATATATTACA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TATGCTAGATATATTAGAAATAACATATCTAGTATGCTAGATATATTAGA chr5A_2436 -------------------------TATGTAGTATGCTAGATATATTAGA chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------CATGTAGTACTCTAGATATATTAGA chr5B_3485 -------------------------CATGTAGTACTATAGATATATTAAA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AATAACATCTTTATCTGTAATTTAGTGCCTAGGTCCTCCAAAGTAGCAGC chr5D_1_TraesCS5D01G005700 AATAACATCTTTATCTGTAATTTAGTGCCTAGGTCCTCCAAAGTAGCAGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AATAACATCTTTATCTGTAATTTAGTGCCTAGGTCCTCCAAAGTAGCAGC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 AATAACATCTTTATCTGTAGTTTAGTGCCTTGGTTCTCCAAAGTAGAAGC chr5A_2436 AATAACATCTTTATCTGTAGTTTAGTGCCTTGGTTCTCCAAAGTAGAAGC chr4A_2436 -------------------------------------------------- chr5A_3174 AATAATGTTTTTATCTGTAACT---------------------------- chr5B_3485 AA-AACATCTTTATCTGTAATTTAGTGCCTAGGTCCTCCAAAGTAGCAGC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TC--CTTGTGGGATTTCCTATACTGCA-ATTGAAACCCCTCTTAGTGCCC chr5D_1_TraesCS5D01G005700 TC--CTTGTGGGATTTCCTATACTGCA-ATTGAAACCCCTCTTAGTGCCC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TCTCCTTGTGGGATTTCCTATACTACA-ATTGAAACCCCTCTTAGTGCCC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 TC--CTTGTGAGATTTTCTGTACACCTTATTGAAAGCCCTATTAGTGCCC chr5A_2436 TC--CTTGTGAGATTTTCTGTACTCCTTATTGAAAGCCCTATTAGTGCCC chr4A_2436 -------------------------------------------------- chr5A_3174 --------------------------------AAACCCATCTTAGTTCCT chr5B_3485 TC--CTTGTGGGATTTCCTATACTGCA-ATTGAAACCCCTCTTAGTGCCC chr5B_3819 -------------------------------------------------- chr5A_4058 ---------GAGATTTTCTGTACACCTTATTGAAACCCCTATTAGTGCAT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GAGGAAGCGTTG-------TTTGTTGCCTTATCTCATTTGGTGGTCAACA chr5D_1_TraesCS5D01G005700 GAGGAAGCGTTG-------TTTGTTGCCTTATCTCATTTGGTGGTCAACA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GAGGAAGCGTTG-------TTTGTTGCCTTATCTCATTTGGTGGTCAACA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 GACGAAGCGTTG-------TTTGTTGCCTTATCTCATTT----------- chr5A_2436 GACGAAGTGTTG-------TTTGTTGCCTTATCTCATTT----------- chr4A_2436 -------------------------------------------------- chr5A_3174 GAGGAAGCGTTGTTTGTTCTTTGTTGCCTTATCTCATTTGG--------- chr5B_3485 AAGGAAGCGTTG-------TTTGTTGCCTTATCTCATTTGGTGGTCAACA chr5B_3819 -------------------------------------------------- chr5A_4058 GAGGAAGCGTTG-------TTTATTACCTTATC-CATTTGGTGGTCAACA chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGGCCAAGTATCTTGGCTCTGCACATATGGCTATGCATGAGG-------- chr5D_1_TraesCS5D01G005700 AGGCCAAGTATCTTGGCTCTGCACATATGGCTATGCATGAGG-------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AGGC-AAGTATCTTGGCTCTGCACATATGGCTATGCATGAGGGGACGAGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ------------------------------CTA----------------- chr5B_3485 AGGCCAAGTATCTTGGCTCTCCACATATGGCTA----------------- chr5B_3819 -------------------------------------------------- chr5A_4058 AGGACAAGTATCTTGGCTCTGCACATACGCGTAAGCACGAGG-------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CTTGCCTGCTCCCCGCGTGTGTGCCCATCCGTGCTCCCGCATACGTGGCA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TGATTTGATTGGAACAAAATAAGACCCGGCCCCACCCCCTTAAAATCAGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GGGGAGATGATTAGATTAGAAAGGAAAAAAGAAAAAAGACAACCGTAAGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TGAAGTGGGAGCACGGATGGGAGCATGGGGAGGGAGCAGGCAAGCCGAAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -----------AGCACCAAGTATCTTGGGTCATGAACTTTGTGAAAAAGC chr5D_1_TraesCS5D01G005700 -----------AGCACCAAGTATCTTGGGTCATGAACTTTGTGAAAAAGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CCTGCATGAGGAGCACCAAGTATCTTGGCTCATGAACTTTGTGGAAAAGC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 --TGCATGAGAAGGACCAAGTATCTTGGCTCGTGAACTTTGTGAAAAAGC chr5B_3485 --TGCATGAGGAGCACCAAGTATCTTGGCTCATGAACTTTGTGAAAAAGC chr5B_3819 -------------------------------------------------- chr5A_4058 -----------AGGAGCAAGTATCTTGGCTAATGAACTTTCTGAAAAAGC chr5D_6120 -------------------------------------------------- SNPs ----------------------------S--------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ACTA-------CTAATTTTTAAC--TGTTGCTGGTTTGTGGAAATTCTTT chr5D_1_TraesCS5D01G005700 ACTA-------CTAATTTTTAAC--TGTTGCTGGTTTGTGGAAATTCTTT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ACTA-------CTAATTTTTAAT--TGTTGCTGATTTGTGGAAAGTCTTT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ACTA-------CTAATTTTTAAC--TGTTGCTGATTTGTGGAAATTCTTT chr5B_3485 ACTA-------CTAATTTTTAAC--TGTTGCTGATTTGTGGAAATTCTTT chr5B_3819 -------------------------------------------------- chr5A_4058 ACTAGCTAGTACTAATTTTTAACTGTGTTGCTGGTTTGTGGTAATTCTTT chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCTACGGTGATCTGACTGTAAACACATGTATATTTTTCTGC---TGTTAT chr5D_1_TraesCS5D01G005700 TCTACGGTGATCTGACTGTAAACACATGTATATTTTTCTGC---TGTTAT chr5B_1 -----AGTACTCGATCGGCCAGCTCTTGGATCTTTTTGATCTTGTGGGGC chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TCTATGGTGATCTGACTGTAAACACATGTATATTTTTCTGC---TGTTAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TCCAGGGTGATCTGATTGTAGACAG-TGTATATTTTTTTCTGGGTGTTAT chr5B_3485 TCCACGGTGATCTGACTGTAGACACATGTATATTTTTCTGT---TGTTAT chr5B_3819 -------------------------------------------------- chr5A_4058 CCCATAGTGATCTGACTGTAAACGCATGTATATTTTTGCTGTTACAAG-- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ACTTGGATGAAATTTCTAAGTTGCAAGTGTAAGGTGGC------------ chr5D_1_TraesCS5D01G005700 ACTTGGATGAAATTTCTAAGTTGCAAGTGTAAGGTGGC------------ chr5B_1 TTGGGGGCCA---------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ACTTGGATGAAATTTCTAAGTTGCAAGTGTAAGGTGGC------------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ACTTAGATGAAAATTCTAAGTTGCAAGTTTAAGGTGGCCTCCCCATTATG chr5B_3485 ACTTGGATGAAATTTCTAAGTTGCAAGTGTAAGGTGGC------------ chr5B_3819 -------------------------------------------------- chr5A_4058 ---TAGATGAAATTTCTAAGTTCCAAGTGTAAGCTGGCATACATACGA-- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 AAACCACGTGTCACAATCCTACCATGGTATGTTGACCTCTAGGCATTTGG chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------------CTCTCCACTATTAAACCACGTGTCACAATCCT chr5D_1_TraesCS5D01G005700 ------------------CTCTCCACTATTAAACCACGTGTCACAATCCT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ------------------CTCTCCACTATTAAACCACGTGTCACAATCCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CATGTGTCATATATACGCCTCTCCACTATTAAACCATGTGTCAGAATCCT chr5B_3485 ------------------CTCTCCACTATTAAACCATGTGTCACAATCCT chr5B_3819 -------------------------------------------------- chr5A_4058 ----------------GCTTGTCCGCTATTAAACCATGCGTCACAATCCT chr5D_6120 -------------------------------------------------T SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 AGCAAGTGCAAGGTCTCTTATCTCTT-TGTGTCATGA---CTTCTAGTCA chr5D_1_TraesCS5D01G005700 AGCAAGTGCAAGGTCTCTTATCTCTT-TGTGTCATGA---CTTCTAGTCA chr5B_1 -------------------------------------------------A chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AGCAAGTGTAAGGTCTCTTATCTCTT-TGTGTCATGA---CTTCTAGTCA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 AGCAAGTGTAAGGTCTCTTATCTATTTGTGTC-TTGACTTCTACTAGTCA chr5B_3485 AGCAAGTGTAAGGTCTCTTATCTCTTTTGTGTCATGA---CTTCTAGTCA chr5B_3819 -------------------------------------------------- chr5A_4058 AGCTTGT----GGTCTCTTATCTA-TTTGTGTGTTGA---CTTCTAGTCA chr5D_6120 AGCAAGTGTAAGGTCTCTTATCTATTTGTGTC-TTGA---CTTCTAGTCA SNPs --------S----------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTTGGCATGGAATTTGAGGTGTTCCC---TG---TTGATTTTGGAACATG chr5D_1_TraesCS5D01G005700 TTTGGCATGGAATTTGAGGTGTTCCC---TG---TTGATTTTGGAACATG chr5B_1 CTTGACGTAAAAGATGGAGTCCTCCGCTGTG---TTCAACATGTACGTC- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TTTGGCATGGAATTTACGGTGTTCCC---TG---TTGATTTTGGAACATG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTTGGCATGGAATTTGCAGTGTTCCA---TATTATTGATTTTGGTACATG chr5B_3485 TTTGGCATGGAATTTGCGGTGTTCCC---TG---TTGATTTTGGAACATG chr5B_3819 -------------------------------------------------- chr5A_4058 TTTGGCATGGAATTTGCAGTGGTCCTTGATG---TTGATTTTGGTACATG chr5D_6120 TTTGGCATGGAATTTGCAGTGTTCCC---TATTATTGATTTTGGTACATG SNPs ----------------S--------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 GGCAATTCCGATGTTATGTCCTGAAGCTT---TCTATCCTTACCAGTTGC chr5D_1_TraesCS5D01G005700 GGCAATTCCGATGTTATGTCCTGAAGCTT---TCTATCCTTACCAGTTGC chr5B_1 --CAATCCACATGTTAAGTCATCCAATATTACTCCACTGCAG-------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GACAATTCCGATGTTATGTCCTGAAGCTT---TCTATCCTTACCAGTTGC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 GACAATTCCGATGTTATGTCCTGAAGCATTAATCTATCCTTCCCAGTTGC chr5B_3485 GACAATTCCGATGTTATGTCCTGAAGCTT---TCTATCCTTACCGGTTGC chr5B_3819 -------------------------------------------------- chr5A_4058 GACAATTCTGATGTTATGTCCTCAAGTTCTTTATCCTACCAC-------- chr5D_6120 GACAGTTCCGATGTTATGTCCTGAAGCTT---TCTATCCTTCCCAGTTGC SNPs -S------------------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TGATAACA------------------------------------------ chr5D_1_TraesCS5D01G005700 TGATAACA------------------------------------------ chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TGATAACA------------------------------------------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TGATAACA------------------------------------------ chr5B_3485 TGATAACA------------------------------------------ chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TGATAACACCCCCCCTTCCCCCTCGCGTCGCCCCTGCTAGGGCGACTCGG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GGGCCCCAAACCCTAGCTCCGCCGCCTCCCCTTTCTTCTCCCCTCCTCCT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CGCCGCCGCCTGAGGCCGCCCCCGGGCAAGCCTGGGGTGTCACCGAGGAA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GGTGGCGGCGGGGCCCTGGCGCCCCTGCCTCTGCTGCGGGGGGACGTGTT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CCCTAGGGCGGCGGCCCTGGTCGGAGAGGCGTCACCGGCCCGGCGGCAGG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CGATGGCGCGGGCGTGGGCCGGCGATCCTGGCCGTGTGGATGGCGGGTGC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CCCGGTGGACGGGAGCCCTGGCAGCAGCTGCTGTGGCTCGCGGTGGCGCC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------GGCCAGA chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 AGATCTGGCCGCCCTGCCCCCCCTGTTTCGAGAGCTCCGCCCCGGCCAGA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 TTGACTT------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TCTGTCCGGCTTCTTTGGGGGCCGCCTGATCTTGCGTCGTTAGGGTGGTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GAGGCGGGGATTCGAAGACCGGGAGAAATTCCAGGCCGGCCTCGTCGGTC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TTGGCGGCGGCGACGCTCGTGGCGCCGTTCCCCTCCCTGGAGGCGCTGTT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CAGGTCAGATCCGACGCCCCCCATCCCTCTAGTCTCCCGGGTGAAAACCT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CAACTCTGTTGGGTGGCGGCGGCGCCCTCGGCGTCGCGTCCTTCCTGAAG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GCGCCGTTTTTGGGAGCTAGGTGGGCAGTGGGCTTCTCGGCGATGTGGTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GGTGTGCAGCGGCGGCAGTAGCTGGTCTTCTTTGTCGGCGGCGAGTTCTT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CAGTGGCTCAACGCCTACAGGGACACTATGCTACTGCTCCTCCGTCCGTT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CCGTTCTGGCAGCTCTTTCTCATCCGTGTCCAGTCCGTGGGTGTTGGGTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GTGCTCTGCTCCTTGAGCTCATTCCGTGGCTAGTCGGGTGAGCTAGGTTC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CTTTCCAGATGCAGCCTGCCGGTGTCTTTCCTCCCAGGTTCTAGGGTGAA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CTGCTACACTGTCAACGGTTCGGCGCCTTCGAGCCAGGCGAGGAGACAGG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GGTCTTCTTTGACAGTGGAGCTGGGAGGACATGGCAATCCGGGGCCGCTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GTGATTTGGCGACGGCGTGCCCTTCCTCGCCATCCGTAATGCTGCTCCTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TTCTGACATTCTCCTTCTTCCTGGTGATTGTATGCGAATGAGGACCTACA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CATTCCCGAGCTGCGTGTCTCCTTGTTCGATCATTTAGCTGGGTGTGTGT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GAGGCTTGTGTGCTGCTGTCCAGCGCCTCTGTATCTTGTCGTTTTTTCGC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TTTCTTGTGTTGGTTTCGAGTTTGTAATCCTGACTGGTTGATGGCTTTGT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------------------------------------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 ---------------------------------------------TTGCC chr5D_6120 TAATTCAAAGCCGGGCTCTTCTGGAGCCTCCGTTCTAAAAAAAAGTTGCT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------ACTGATAAT----GTGCAATGACTCAGCCTGATTCCATTTTCT chr5D_1_TraesCS5D01G005700 -------ACTGATAAT----GTGCAATGACTCAGCCTGATTCCATTTTCT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 -------ACTGATGAT----GTGCAATGACTCAGCGTGATTCCATTTTCT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------ACTGGTGAT----GTGCAATGACTCGGCCTGATTCCACT---T chr5B_3485 -------ACTGATAAT----GTGCAATGACTCAGCCTGATTCCATTCTCT chr5B_3819 -------------------------------------------------- chr5A_4058 CATAACAACTGATGATGTACGTGCAATGATTCGTCCTGATTCCATTTT-- chr5D_6120 GATAACAACTGGTGAT----GTGCAATGACTCGGCCTGATTCCACTTT-- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTTAGA---------------CTGAAAGAATGAATTTTTTGTTGCTA--- chr5D_1_TraesCS5D01G005700 CTTAGA---------------CTGAAAGAATGAATTTTTTGTTGCTA--- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CTTAGA---------------CTGAAAGAATGAATTTTTTGTTGCTA--- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CTTTGA---------------CTGAAAGAAGGAATATTTTGTCTCTAATG chr5B_3485 CTTAGA---------------CTGAAAGAATGAATTTTTTGTTGCTAGTG chr5B_3819 -------------------------------------------------- chr5A_4058 -TTGTAAACCGGTGATGTTAGCTGAAAGAATGAATATTTTGTAGCTAAGT chr5D_6120 -TTAGA---------------CTGAAAGAAAGAATATTTTGTCTCTAATG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------TTTTTTTTTTGTGGTATACAC-GGACTCTGTTTTGCAG chr5D_1_TraesCS5D01G005700 ------------TTTTTTTTTTGTGGTATACAC-GGACTCTGTTTTGCAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ------------TTTTTTT-----GGTATACAC-GGACTCTGTTTTGCAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTGTGACGCTAATATTTTT-----GGTATATAT-GGACTCTGTTTTGCAG chr5B_3485 TGGTATGGCTAATTTTTTT-----GGTATACACGGGACTCTGTTTTGCAG chr5B_3819 -------------------------------------------------- chr5A_4058 TTGTATTTA-------------------------------TGTTTTGAAG chr5D_6120 TGGTGATGCTAATATTTTT-----GGTATATAT-GGACTCTGTTTTGTAG SNPs -------------------SSSSS-------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 CTATGTGC-ACTAACTGTGATGTGAAGTTGCT------------------ chr5D_1_TraesCS5D01G005700 CTATGTGC-ACTAACTGTGATGTGAAGTTGCT------------------ chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CTATGTGC-GCTAACTGTGATGTGAAGTTGCT------------------ chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CTATGTGC-GAGAATTGTGATGTGAATATACATAGTTGCT---------- chr5B_3485 ---TGTGC-GCTAACTGTGATGTGAAGTTGCT------------------ chr5B_3819 -------------------------------------------------- chr5A_4058 CTGTGTGTAGCGAACTGTGATGTGAATATATATATATCTTGAAGAAGTTA chr5D_6120 CTATGTGC-ACGAGCTATGATGTGAATATACATACTTGCT---------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ---CCCTTTTTTGCTGCATTTCTTATTAGACGG--CTTCACGCATAAATT chr5D_1_TraesCS5D01G005700 ---CCCTTTTTTGCTGCATTTCTTATTAGACGG--CTTCACGCATAAATT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ---CCCTTTTTTGCTGCATTTCTTATTAGATGG--CTTCACGCATAAATC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ----CC-TTTTTGTTGCATTTCTTATTGGACGGGTTTTCATGCATAAATT chr5B_3485 ---CCCTTTTTTGCTGCATTTCTTATTAGACGG--TTTCACGCATAAATT chr5B_3819 -------------------------------------------------- chr5A_4058 GTCCCTTTTTTTGCTACATTTCTTATTGGATGG--TTTCATGCATATATT chr5D_6120 ----CCTTTTTTGCTGCATTTCTTATTGGACGG--TTTCATGCATAAATT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TCTAGATTAACATGTA---------------------------------- chr5D_1_TraesCS5D01G005700 TCTAGATTAACATGTA---------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TCTAGATTAACATGTACTCCCTCCGTTCCAAATTACTCGTCGTGGTTTTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TCTAGATTAACATTTA---------------------------------- chr5B_3485 TGTAGATTAACATGTA---------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 TCAAGATTAACATGTA---------------------------------- chr5D_6120 TCTAGATTAACATGTA---------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GTTTAAATTTGGACTAAAACCACGACGAGTAATTTGGAACGGAGGGAGTA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 TTTTACATTGGCATTACAAATAAATAAATAGCCAGACTAATT-------- chr5D_1_TraesCS5D01G005700 TTTTACATTGGCATTACAAATAAATAAATAGCCAGACTAATTCCGCGAGA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TTTTGCATTGGCATTACAAATAAATAAATAGCCAGACTAATTCCGTGAGA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTTTTCGTTGGCATGACAAATAAATAAATAGCCAGACTATTTCTGTGAGA chr5B_3485 TTTTGCATTGGTATTACAAATAAATAA---GCCAGACTAATTCCACGAGA chr5B_3819 -------------------------------------------------- chr5A_4058 TTTTTCCTTGGCATTAAAAATAAATAAATAGTGAGACTAATTCCGTGAGA chr5D_6120 TTTTTCCTTGGCATTACAAATAAATAAATAGCCAGACTATTTCTGCGAGA SNPs ----S--------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AACTGTACATAACCATGGCGACGGTGTGGAAGTGGAACAAAGTGAGTCGG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AACTGTACATAACCATGGCGACGGCGTGAAAGTGGAATAAAGTGAGTCGG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 AACTGGACGTAACCATAGGGACGGTGCGGAAGTGGAACAGAGTAAGTTGG chr5B_3485 AG---------------GGGACGGTGTGGAAGTGGAACAAAGTGAGTCGG chr5B_3819 -------------------------------------------------- chr5A_4058 AATTGGTTGTAACCAAGATGACCCTGTGGAAGTGGAACAAAGTGTGTTGT chr5D_6120 AACTGGACGTAACCATAGCGACGGTGCGGAAGTGGAACAGAGTGAGTTGG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GAACCAAAATCATAGATCAAATCACAAAGGGGTTGTTTTCTATCAAATGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GAACCAAAATCATAGATCAAATCACAATGGGGTTGTTTTCTATCAAATGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 GAACCAAAATCATAGATCAAATTGCAAAGGGGTTCTTTTCTATCAAATAT chr5B_3485 GAACCAAAATCATAGATCAAATCACAAAGGGGTTGTTTTCTATCAAATGT chr5B_3819 -------------------------------------------------- chr5A_4058 GAACCAAAATCATAGATCAAATCGCAA-GGTGTTGTTTTCAATCGAACCT chr5D_6120 GAACCAAAATCATAGATCAAATCGCAAAGGGGTTCTTTTCTATCAAATAT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TCGGT---TTTTTT-CCCTCGCCCACAATGGCGTCTAGGATTTACTAGTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TCAGT---TTTT-CCCCCTCGCCCACAATGGTGTCTAGGATTTACTAGTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TCATT---TTTTTT--GCTCGCCCAGAATGGCGTCCAGGATTTACTAGTG chr5B_3485 TCGGGTTTTTTT-T--CCTCACCCACAATGGCGTCTAGGATTTACTAGTG chr5B_3819 -------------------------------------------------- chr5A_4058 TTTGG---TTTT-TTT---------------------------------- chr5D_6120 TCATG---TTTT-T--GCTCGCCCACAATGGCGTCCAGGATTTACTAGTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AATCTGAGTTCTGGGGAATTCCTCCTGCCTCGCATGGCG----------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AATCTGAGTTCCGGGGAATTCCTCCTCCCTCGCATGGCG----------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TATCAGAGTTCTGAGAACTTCCTCCTCCCTCGCATGGCTTTATGATGTCA chr5B_3485 AATCTGAGTTCTGGGGAATTCCTCCTCCCTCCCATGGCTTTATGATGTCA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TATCATGGATTTACT----------------------------------A SNPs --------------------------S----------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 ------------------------------TGAGTTTATAAATAAAACCA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ------------------------------TGAGTTTATAAATAAAACCA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 GCTGATCTTTTTAGAGAAAAAGAGAGAACCTGACTTTAT-AATTAAATCA chr5B_3485 G-TGATCTTTTTAGAGAAAATGCAGGAGTCCGACTTTATAAATAAAACCA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GCTGATTTTTTTAGAGAAAAAGTGAGAGCCTGACTTTATAAATAAAGTCA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CGCGGCAGTATCAAGCATAGGCATA---TACTCCCTCCGTTTCTAAATAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CGCGGCAGTATCAAGCATAGGCATA---TAGAAAGGTAGCAAACAACCAA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CACGGCAGTATCCAGCACAAGCATA---CGGAAAGGTAGCAAAGAACCAA chr5B_3485 AGCGGTAGTATCGAGCATAGGCATATAGTAGAAAGGTAGCAAACAACCAA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TACGACAGTATCCAGCACAAGCATA---CGGAAAGGTAGCAAACAATCAG SNPs ------------------------------SSSSSSSS-SSSSS--SS-S forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AAGTCTTTTT------------------------AGTCATAACAACACAC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CAAGTTTAAACGCTGCACCACCAACAAGGATTACAGTCATAACAACACAC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CAAGTTTAAATGCTGCAC---CAACAAGGATTGCAGTCATAATGACAGAC chr5B_3485 CAAGTTTAAGCGCTGCAC---CACCAAGGATTACAGTCATAACAACACAC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CAAGTTTAAATGCTGCAC---CAACAAGGATTGCAGTCATAACGACACAC SNPs S-SSS--SSS---------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 ATGGCACGCATGCCAGCAACCTATGCACTAAAAGGGACACCAAGAAGACT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ATGGCACGCATGCCAGCAACCTATGCACTAAAAGGGACAGCAAGAAGACT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ATGACATGCATGCCAGCAACCCACACACTAAAAGATTTAGCAAAAAGACT chr5B_3485 ATGGCACACATGCCAGCAACCTATGCACTAAAAGGGACAGCAAGAAGACT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 ATGACATGCATGCCAACAACCTACGCACTAAAAGATTTAGCAAAAAGACT SNPs ---------------------------------------S---------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CCAAGGGAAGCATCCGCTAGAGGAAGGGACTCTCTCCTGGCTGATGAGAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CCA-GAGAAGCATCCGCTAGACGAAGGGACCCTCTCCCGGCTGATGAGAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ACA-TGGAAGCATTAGGTAGACAAAGGGACCCTTTCCCAGCTGATGAGAT chr5B_3485 CCA-GGGAAGCATCCGCTAGACGAAGGGACCCTCTCTCGGCTGATGAGAT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CCA-GGGAAGCATTAGGTAGACAAAGGGACCCTTTCCCAGCTGATGAGAT SNPs ---S-----------------S--------S------S------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------TGGCTGATGAGAT input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CCGAACGCTGTGGCCTTCATGCAAGAGATCAGGAGCTCCGTCGCCTCAAT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CCG-ACGTTGTCGCCTTCATGCAAGAGATCAGGAGCTCCATCGCCTCAAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTG-ACGTTGTGA------------------------------CCTCAAT chr5B_3485 CCG-ATGCTGTGGCCTTCATGCGAGAGATCAGGAGCTCCGTCGCCTCAAT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TCA-ACGTTGTGA------------------------------CCTCAAT SNPs ---S---------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 CCGAACG------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 GTCAACATCTTTAACTAGCGGCTTCCATTGCTGTAAAAGTTTAAGCAATT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 GTCAACATCTTTAACCAGCGGCTTCCATTGCTGTAAAAGTTTAAGCAATT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 GTCAACATCTTTAACTAGCGGCTTCCACTGCTGTAAAAGTTTAAGCAATT chr5B_3485 GTCAACATATTTAACTAGCGGCTTTCGTTGCTGTAAAAGTTTAAGCAATT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 GTCAACATCTTTAACTAGCGGCTTCCACTGCTGTAGAAGTTTAAGCAATT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TATAAATGCAATCAGCATGCTTTTTAGGG--------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TATAAATGCAATCAGCATGCTTTTTAGGG--------------------- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TAG------------------------------TATGTTCAATCGAGAAC chr5B_3485 TATAAATGCAATCAGCAGGCTTTTTAGGGAAGATATGTTCAATCAAGAAC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TAG------------------------------TATGTTCAATCGAGAAC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 ---------------------------------------------AAGCA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ---------------------------------------------AAGCA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTGTTTCTAGTGGTCCAAAGTGCCCAAGACATAGTAGCAAAGCCAAACCA chr5B_3485 TTGTTTCTAGTGGTTCAAAGAGCCCAGGACATAGCAACAAAGCCAAAGCA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TTGTTTCTAGTGGTCCAAAGAGCCCAAGACATAGTAGCAAAGCCAAACCA SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AAAGATCCTACCCATTTGAGCAGACAAAGACTTAGCCAAATCAGAGCAGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AAAGATCCTACCCATTTGACCAGACAAAGACTTAGCCAAATCAGAGCAGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 AAAGATCCTATTCATTTGACCAGACAAATACTTGCT-AAATCAGAGCAGT chr5B_3485 AAAGGTCCTACCCATTTGACCAGACAGAGACTTAGCCAAATCAGAGTAGT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 AAAGATCCTACTCATTTGACCAGACAAAGACTTAGCTAAATAAGAGCAGT SNPs -------------------S------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AGCGACCGTAGGAGCCCCTTTTGGTCGTTGTTGTGTCCAGAAAGAAAAAC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 ACCGACCGTAGGAGCCCCTCTTGGTCGTTGTTGTGTCCAGAAAGAAAAAT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 ACTGACCGTAGGAGCCCCTTTTGGTCGTTGTTGAGCCTACCAAGAAAAAC chr5B_3485 ACCGACCGTAGGAGCCTCTTTTGGTCGTTGTTGTGTCTAGAAAGAAAAAC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 ACCGACCGTAGGAGCCCCTTTTGGTCGTTGTTGAGTCTAGCAAGAAAAAC SNPs -S------------------------------------------------ forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TATTTGGGTGAAGTTATCGAAGAGTAGGAATTA-TTTTTAGTTCTTTCCC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TATTTGGGTGAAGTTATCGAAGAGTAGTAATTA-TTTTAGTTNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TATGTTGGTGTAGTTATCGAAGATTAGGAACTCTTTTTTACTTCTTTCCC chr5B_3485 TATTTTGGTGAAGTTACCGAAGAGTAGGAATTA-TTTTTAGTTCTTTCCC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TATGTTGGTGTACTTATCGAAGATTAGGAAT-----TCTACTTCTTTCCC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CACCCGG------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CACCTGC------------------------------------------- chr5B_3485 CACC-GG------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CACCTGC------------------------------------------- SNPs ----S--------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 -------------------------------------------------- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -------------------------------------------------- chr5B_3485 -------------------------------------------------- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -------------------------------------------------- SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 --------------------CCTACCTTTGGTAAGGAACTGTGATGTAAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 NNNNNNNNNNNNNNNNNNNNCCTCCCTCTGGTAAGGAACTGTGATGTAAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 --------------------CCTCCCTCTGGTAAGGAAGTGTGATGTAAG chr5B_3485 --------------------CCTCCCTCTGGTAAGGAACTATGATGTAAG chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 --------------------CCTCCCTCTGGTAAGGAAGTGTGATGTAAG SNPs -----------------------S---S---------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TGTTTCCATCTATTCCTTACCCCTTACAAAAGTTTTAGGTTCACGTGAGT chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TGTTTCCATCTATTCCTTTCCCCTTACAGAAGTTTTAGGTTCACGTGAGT chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TGTCTTCATCTATTCCTTACACCTTTCAAAAGTTTTAGGATCATGGGGGT chr5B_3485 TGTTTCCATCTATTCCTTACCCCTTACAAAAGTTTTAGGTTCACGTGAGT chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TGTCTTGATCTATTCCTTACACCTTCCAAAAGTTTTAGGATCATGGGGGT SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 TTTGGAATCACTATGATATCGATTGCTGGCGAGAATTCTGGTCTTGGTGC chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TTTGGAATCACTATGATATCGATTGTTGGCGAGAATTCTGGTCTTGGTGC chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 TTTGGAATTGATATGATATCGATTGCCGGCGGGAATTCTGGTCTTGGTGC chr5B_3485 TTTGGAATCACTATGATATCGATTGCTGGTGAGAATTCTGGTCTTGGTGC chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 TTTGGAATCTCTATGATATCGATTGTCGGCGGGAATTCTGGTCTTGGTGC SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CTCCCGATCGTGGGATGTGTCCCGGGGAGTTGATTTCCAAGGGATTCTTG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CTCCCGATCGTGGGATGTGTCCCGGGGAGTTGATTTCCAAGGGATTCTTG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CTCCTTACCGTATGGATGTGTCCCGGGAGTTGACTTACAAGAGATTCTTG chr5B_3485 CTCCCGATCGTGGGATGTGTCCTGGGGAGTTGATTTCCAAGGGATTCTTG chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CTCCTTACCGTAAGGATGTGTCCTGGGAGTTGATTTACAAGAGATTCTTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CCACAGTTGTATTATTTCAGTTCCATTTACTTGAGGATGCTGA-TTTTCA chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 TCACAGTTGTATTATTTCAGTTCTATTTACTTGAGGATTCTGA-TTTTCA chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 CCACAATTGCATCATTTCAGTTCCATTACTTCTGGACACG-GATTTTCAA chr5B_3485 TCATAGTTGTATTATTTCAGTCTCACTTACTTGAGGATGACGA-TTTTCA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 CCACAATTGCATCATTTCAGTTCCATTACTTCTGGACACG-GA-TTTTTG SNPs -------------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 AAATCATTTCAACACAATTTGTGGTGGA----------------AATCAG chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 AAATCATTTCAACACTATTTGTGGTGGA----------------TATCAG chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 AAATCATTTCAATACTATTGATGGTGGAAGTAGGCTGAGCATGAT----- chr5B_3485 AAATCATTTCAACACTATTTGTGGTGGA----------------T----- chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 AAATCGTTTCAATACTATTGGTGGTGGAAGTAGGCTGAGCATGAT----- SNPs ---------------S----------------------------S----- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 -------------------------------------------------- chr5D_1_TraesCS5D01G005700 CTGAGAATGATCCCTAGTACTAGGTAGACAACACACATGGTACTTCCAT- chr5B_1 -------------------------------------------------- chr5B_925 -------------------------------------------------- chr5B_927 -------------------------------------------------- chr5B_934 -------------------------------------------------- chr5A_973 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr5A_986 -------------------------------------------------- chr3B_988 CTGAGCATGATCCCTAGTACTAGGTATACAACACACATGGTACTTCCAT- chr5D_1560 -------------------------------------------------- chr5B_1570 -------------------------------------------------- chr2B_1578 -------------------------------------------------- chr2D_1578 -------------------------------------------------- chr4D_1694 -------------------------------------------------- chr7D_1839 -------------------------------------------------- chr5D_2436 -------------------------------------------------- chr5A_2436 -------------------------------------------------- chr4A_2436 -------------------------------------------------- chr5A_3174 -----------CCCTGGTACTTGATAGACAACGCAGATGGTATTGGCATA chr5B_3485 -----------CCCTAGTACTAGGTAGACAACGCACATGGTACTTCCATA chr5B_3819 -------------------------------------------------- chr5A_4058 -------------------------------------------------- chr5D_6120 -----------CCCTGGTACTTGATAGACAACGCAGATGGTACTGCCATA SNPs -----S-------------------------------------------- forward_217 -------------------------------------------------- reverse_1076 -------------------------------------------------- forward_418 -------------------------------------------------- reverse_2140 -------------------------------------------------- forward_1095 -------------------------------------------------- reverse_2199 -------------------------------------------------- forward_1129 -------------------------------------------------- reverse_3390 -------------------------------------------------- forward_2399 -------------------------------------------------- reverse_4214 -------------------------------------------------- forward_3390 -------------------------------------------------- reverse_5788 -------------------------------------------------- forward_5446 -------------------------------------------------- reverse_7827 -------------------------------------------------- forward_6930 -------------------------------------------------- reverse_11638 -------------------------------------------------- input_sequence_6115 ------------ chr5D_1_TraesCS5D01G005700 TCTAGTATCATT chr5B_1 ------------ chr5B_925 ------------ chr5B_927 ------------ chr5B_934 ------------ chr5A_973 ------------ chr5A_986 ------------ chr5A_986 ------------ chr5A_986 ------------ chr5A_986 ------------ chr3B_988 TCTAGTATCATT chr5D_1560 ------------ chr5B_1570 ------------ chr2B_1578 ------------ chr2D_1578 ------------ chr4D_1694 ------------ chr7D_1839 ------------ chr5D_2436 ------------ chr5A_2436 ------------ chr4A_2436 ------------ chr5A_3174 TCAAGTATC--- chr5B_3485 TCTAGTATCATT chr5B_3819 ------------ chr5A_4058 ------------ chr5D_6120 TCAAGTATCGTT SNPs ------------ forward_217 ------------ reverse_1076 ------------ forward_418 ------------ reverse_2140 ------------ forward_1095 ------------ reverse_2199 ------------ forward_1129 ------------ reverse_3390 ------------ forward_2399 ------------ reverse_4214 ------------ forward_3390 ------------ reverse_5788 ------------ forward_5446 ------------ reverse_7827 ------------ forward_6930 ------------ reverse_11638 ------------