>input_sequence_61141
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-----------------------------------------------------------------------------GCT
AGCTAGCCATGGGGAAGAAGCCGGAGAAGGAGAACCCGAGGAAGAAGAAGCTGCAGAAGGTGCAGAGCGCGGCGCAGCAG
CAGAAGGGGAAGCTCTACATCATCGTGGCCTGCATCGCCCTGCTCGTCTGCGGCTGCTGCACCAAACAGCAAAAGCGTAC
GTGTGCATATCAATAAGAACCATGCAGTGCAGGCATACATACAATACGTACGTACGTAGAGCCTATGAACATCAAAAGCG
TCAATGTTATAAGCTTTCATTTCTGCTTGGGTACACCCTATATAGGTCATGTTTCTTCAGCAAGAAGTAAAAGTCCGTGC
ATATAGGTCTTTTATCAGTTTCTCCAGACTCAAGA--------------------------------------TTGAATT
GAGTGGCTTACAATGTTGCAGACAGAATTTATATATTGGACATTTACTGCAAGTCTGCAACAATGCATTTCCTTTTCTTG
AGAGGAATCGTGTTGGACTGTTAGTGCAGAGATTTAATTAGGTACCAAAAAATTATGAGCTACTGACAGATTGGTTCAAG
TTACTTATCGAACTACAGTCTTTGCTTATATGATTGCAGGTCAGAAACGGGATAGGAAGAAGTAGCTGGCGAAGAACCAC
AGACAATCGGCAAAAATACCACCATCATACGATATCATTTTCCTTTCTATAGCTACTGGACTTGATTGTAGCAC------
-------------------AGTACTGGATATATAGTTTGAAGTTTGAAGTTTGAAGTTTGAACACGCCAATATCGTTCAT
ACTACTACTTGGTAGGTTGATGTTATCCGTGGGCTACTCGGGAGACAAAACGAAGAACACGAGC---CTGGGAGGAAAGA
GAACGGGAATGAGCAATATAGTTAAGT---------------------CTCCGTTTAAAGGGACGAACAATGGAACAAGC
ACGAGAATAAAAACGTGAGGAAGCCTTGATTACTTTGCACATGTAAAACAGCCTTTTGTGTGATTTGGAGCTAGCTAGGT
CGGGAGGCCGAACACACACCCAATTACATTAATAAGACGTATTTGCTTTTCAAGTTGATGCAGAATCTCTGCTTTGTAAA
GCGATT-GGGTTTATATAAAGACCACGAATGTGAGGAAATGGATGAAGCTA-----------------------------
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>chr1D_1_TraesCS1D01G247000
ATAGATATAAGATGCACCCAACCAATATCATAGTACTCGCACAAAAAACACACGACTAAATTGAAAAGTATAAGACCAAA
GCTATGTGTAGGCGAGTAAAAAAGAAAAAAAA-------------AGATCAAAACCGTGACCAACAAACCACAACATTTA
CCATATCGGATGCCAACTATCTCATGACACCACGTGGACGACGAGATTCTTTAACAACAATGCCTTCAGGAAGGGAGTGA
CGTTTAACCGCCGCTTTCGTCGCTAGGTCCAACCACCCAAAGCCAGAATTTATATTTTCACCCAGAAGATCCAGTCCAAG
CATATCCGAGCAATGACTTTAACAAGGTAACAATATAAAAACATCATCATTGCTAGGTATAACCAGCTCAGATAAGATGT
AGGCTCGAGACCGGGTGCTCGAGTGGCACCACCATCGACATCATTTATATGTTATCGCTGCCACTTTTCCACTATCCCAA
CAATTACATGCGATACGCGGCCGTTGCCGCTGCATAACTATCCACATGCATTATCATCAACTTCAATCAAGAACAGCTGC
ATAACCACAATTTTGGCTGCCACAAATTAAGCACCTGCATTAATATGTACGGTCAA----AACCTTTTGGCGGCATAAAA
CCTTGTGAAGGTCCA-----------------------------------------------------------------
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--------------------------------------------------------------------GCTTCAGCGAGT
CTCTGTCCTGCGCTGCGAACGTTTCA-GCGGCTCGGAGACACGCCACGTCGTCATGATTGGTAGCTTACTATTTGACGAC
GAGTTTGGGAT---------------------------------------TCTCTCCGCCGATCGATAAATCACTAACAA
AACCACTGCAAGCTTTGGCAGAAACAGTT-GGAGGTGGACATGTCTTGTAGCTGATCGG------CGCCGTCGCTTTCGG
CCCGGCTGGGCAGCCGATGCGACGACGCGATGGATCGCAGATGAAATACTCCTTTATCCCTCTGATCTCGATCCGGTCCG
CACTTATAAGTTATGGGCGCGGATGCTGCGTGGTACTTGCAGCTAAACGGAATTAGCGTTAGGCACGTGCTTCGTCAGCT
AGCTAGCCATGGGGAAGAAGCCGGAGAAGGAGAACCCGAGGAAGAAGAAGCTGCAGAAGGTGCAGAGCGCGGCGCAGCAG
CAGAAGGGGAAGCTCTACATCATCGTGGCCTGCATCGCCCTGCTCGTCTGCGGCTGCTGCACCAAACAGCAAAAGCGTAC
GTGTGCATATCAATAAGAACCATGCAGTGCAGGCATACATACAATACGTACGTACGTAGAGCCTATGAACATCAAAAGCG
TCAATGTTATAAGCTTTCATTTCTGCTTGGGTACACCCTATATAGGTCATGTTTCTTCAGCAAGAAGTAAAAGTCCGTGC
ATATAGGTCTTTTATCAGTTTCTCCAGACTCAAGA--------------------------------------TTGAATT
GAGTGGCTTACAATGTTGCAGACAGAATTTATATATTGGACATTTACTGCAAGTCTGCAACAATGCATTTCCTTTTCTTG
AGAGGAATCGTGTTGGACTGTTAGTGCAGAGATTTAATTAGGTACCAAAAAATTATGAGCTACTGACAGATTGGTTCAAG
TTACTTATCGAACTACAGTCTTTGCTTATATGATTGCAGGTCAGAAACGGGATAGGAAGAAGTAGCTGGCGAAGAACCAC
AGACAATCGGCAAAAATACCACCATCATACGATATCATTTTCCTTTCTATAGCTACTGGACTTGATTGTAGCAC------
-------------------AGTACTGGATATATAGTTTGAAGTTTGAAGTTTGAAGTTTGAACACGCCAATATCGTTCAT
ACTACTACTTGGTAGGTTGATGTTATCCGTGGGCTACTCGGGAGACAAAACGAAGAACACGAGC---CTGGGAGGAAAGA
GAACGGGAATGAGCAATATAGTTAAGT---------------------CTCCGTTTAAAGGGACGAACAATGGAACAAGC
ACGAGAATAAAAACGTGAGGAAGCCTTGATTACTTTGCACATGTAAAACAGCCTTTTGTGTGATTTGGAGCTAGCTAGGT
CGGGAGGCCGAACACACACCCAATTACATTAATAAGACGTATTTGCTTTTCAAGTTGATGCAGAATCTCTGCTTTGTAAA
GCGATT-GGGTTTATATAAAGACCACGAATGTGAGGAAATGGATGAAGCTAGCT--------------------------
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------------------------------GACTATGAAATCGGTCAACCAGTGCAGATTCGCCATGATGTC-TTTTTTT
ATGGAAGATTCCGGCAATGCCTATTTGTCGCTTCAGGCGCCAATTTCTATTGTTTTTGCATACCGGCGCCTGAAGCAGCT
CACTTGCGTGTCTAGTTGGGC-GGCTCAGATTTTTTTTCCTGTTTTCTTTAACGCGCAAAACAACCTGCAAGTGCACAGG
CGTGATTACTATAGCTTTTCATTTCATTTCTTCTTTCTCTTTTCTTGGAACTGTTTTGTTCGTTTTCCCTTTTGTTTTTA
TGTTTCTTTTGTTTGTCCTTTTTTCTTGAAAAGGTTTTGTTCATTTTTTCTATATTTCTA--CTTTTACCTAAATGCGTG
ACCATTTTCTTCCAATTTGTGGAATATTTTTCAAAATCGATGAACTTTTCTTCAAGATCGATGAACTC-TTTTCTAAATT
CGATGAACTTTTTCTGAAAATCAATGATTATGTTGTTCAAAATTGATGAACAGTTTTCAATATCGAAGAA-TTATTTCAG
AATTGATGAAT--------------------------------------------------------------TTTTTCT
AATTCGATGAACTTTTCTCAAATTCAATGATT---------------------------------------------TTC
CAGATTCAATGAACTTTTTCATATTCAATGAAACTTTTTTCAT-------------------ATTCGATGAACTTTTTTC
----------------------AAATTGGTGAACTTTCTTTCAAAAATCGATGAACTTTTATCA----------------
------------------------TTTCCGCAAACTTTT-CCATTTTCTATGAACATTTAAAAAAATT----GTTGTTTT
CAGTTTTTTTATAAATAGTTTTCGAATTAATGCTTTCATTTGAAAAATAATTTATCTGGTGTTTATAACATATGTTAACT
GAAGGAAGAGTCAAATAACACTGTTTCTGAATTGTTGTCAACGACATACGCTCGACGTAGTGGTTATTAGCGGCATCTGC
CAAGGCTTGCATTCATAGTTCGAATCCTGGTTCTCCAGTG--AGCGACTAGAACACCTCTTTTTTTAATAAAAAAAACCG
GTGTGTTCGAGTATTTTGTTGGGCCGAC
>chr1B_59
AATA----------------------------------------------------------GAAAAGTATAAGACCAAA
GATTTTTGTAGGCAAGTAAAAATGAAAAAGAAAAAGAACTCAAAGAGATCAGAACCGTGATCAGCAAATTACAATAATGA
CCATATCTGAACCAATC-ATTTCATGACACCACACGGACGACGAGATTCGTCAACAGCAATGCTTTCAGGAAGGGAGTGG
CGTTTAACCGCCGCCGCCGTCACTAGATCCAACCAT-------CAGAATCTAGATTTTCACCCAGAAAATCCAGTCCGAG
CATACCCGTGTAATGACTTCAATAAGGTAACAACATAAATACATCATCATTGCTGGGTATAACCATCTCGAATAC---GT
AGGCTCGAAACCGGGTGCTCGAGTGGCACCACCAACGACGTC-----------------GCCACTTTTCCGCTATCCCAA
CAATTACATGCAATATGCGACCGTAGCCGCTGCATAACTATCCATATGCATTATCATTGTATTCAATCAAGAACAGCTGC
ATAACCACAATTTTGGCTGCCACAAAATAAGCACCTGCATTAATATGTACGGTCA----GAACCTTTTGACGGCATAAAA
CCTTGTGAAGGTCCA-----------------------------------------------------------------
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--------------------------------------------------------------------GCTTCAGCGAGT
CTCTGTCCTGCGCTGCGAACGTTTTCGGCGGCTCGGAGGCACGCCACGTCATCATGATTGGTAGCTTACTATTTGACGAC
GAGTTTGGGAT---------------------------------------TCTCTCCGCCGATCGATAAATCACTAACAA
A-CCACTGCAAGGTTTAGCAGAAACAGTT-GGAGGTGGACATGTCTTGTAGCTGATCGG------CGCCGTCGCTTTCGG
CCCGGCTGGGCAGCTGATGCGACGACGCGATGGATCGCAGATGAAATA--------TCCCTCTGATCTCGATCCGGTCCG
CACCTATAAGTTATGGCCATGGATGATGCGTGGTACTTGCAGCTAAACGGAAGTAGTGTTAGACACGTGCCTCGTCAGCT
AGCTGGGCATGGGGAAGAAGCCGGAGAAGGAGAACCCGAGGAAGAAGAAGCTGCAGAAGGTGCAGAGCGCGGCGCAGCAG
CAGAAGGGGAAGCTCTACATCATCGTGGCCTGCATCGCCCTGCTCGTCTGCGGCTGCTCCACCAAACAGCAAAAGCGTAC
GTGTGCATATCAATAA------TGCAGTGCAGACATACATACAATACGTACGTACGTAGAGCCTATGAACATCGGAAGTG
TCAATGTTATAAGCTTTTTCCAGCATGAAAGTG-----TATATAGCTCATGTTTCTTCAGCAAGAACTAAAAGTCCGTGC
ATATAGGTCTTTTATCAGTTTCTCCCGACTCAAGATTGAATTGAGTGGTTTTTTTTTTTTTTTTGCGGAAAAATTGAATT
GAGTGGTTTACAATGTTGCAGACAGAATTTATACATTGGACATTTACTGCAAGTCTGCAACAATGCATTTCCTTTTCTTG
AGAGGAATGGTGTTGGACTGTTAGTGCAGAGATTTAATTAGGTACCAAAAAATTATGAGCTACTGACAGATTGGTTCAAG
TTACTTATCGAACTACAGTCTTTGCTTATATGATTGCAGGTCAGAAACGGGATAGGAAGAAGTAGCTGGCGAAGAACCAC
AGACAATCGGCAAAAATACCACCATCATACAATATCATTTTCCTTTCTATAGCTAATAACCACAGTAAAGACCG------
----------------------------TATATAGTTTGAAGTTTGAA--------------CACGCCAATATCGTTCAT
ACTACTACTTGGTAGCTTGATGTTATCCGTGGGCTACTCGGGAGACAAAACGAAGAACACGAGCCAGCTGGGAGGAAAGA
GAACAGGAATGAGCAATATAGTTAAGATATCTCTTCTCGCCTACAGGCCTCCGTTTAAAGGGACGAACAATGGAACAAGC
ACGAGAATAAAAACGTGAGGAAGCCTTAG----TTTGCACATGTAAAATAGCCTTTTGCGTGATTTGGA-CTAGCTAGGT
CGGGAGGCCGAACACACACCCAATTACAGTAAGAC--CGTATTTGCAATTCAAGTTGATGCAGAATCTCTGATTTGTAAA
ATGATT-GGGTTTATATAAAGACCACG-ATGTAAGGAAATGGATGAAGCTAGCTGTTACAAGATTATCTGTCGGTCGTAG
CAGTCTCACACCCAAGCCCCTCCCCTCCCTCGCGTCGCCCTGCTTGGGCGACTCGAGGGCGAAACGTAGCCCCGCCGCCT
CCCCTCCCCCCTCCTCGATCTCCCCTCGCCGCCACCGGAGGCTGCCGCCGGGCAAGCCCGGTGTGCTGCTGATGACGGTG
GCGGCGGGGCCCTCGCTGCCTCGCCTCGCCCGCGGGGGGCTGCGGGATCTGGGGCGGCGGCCCCGGCCGGTGCGACGCCT
CCAGCTCGGCTTCTGGTGGCGCGGGCGTGGGCCGGCGGTCTTGGCCATGAGGACGGCGAGATCTCCGGAGGATGCAGATC
GAGGCGCGGCGACGGCTTCGGCTACAGTGGCGTCAGATCTGGCCGCCTCCTCCCCAACTCTCCACCAGCGGGCTCCTTCC
CCCCACAGATCCGGCCTGCTACAGCGTCGGGGGCTGGTTTTGGTGGGTGGGAGCGGATGTTGGGGGTCCAGGACCAGGGG
AAACCCTAGCCAGCTTTGCCGGCGCGACGGTGGCGACGCCCGCGGGCGCCGCTCACCACCTTGGAAGCGCCGGCCAGGTC
TTGTCCTCCCCATCCCATGCCCACTTGCTTCCCGGGTGAAAACCACAACTGTGTTGGACGGCGGCGACGCCCTTGGCGCC
GTAATCTTCTTGAAGACGCCGTTTTTGGGAACAAGTGGGGCGGTGGGCTTCGGTGTGGTGTGGTTGGTGTGCGGCGGCGG
CGGCAGCAAGTCTCCAGCGGCGTGTCCTCCTGGAGCAGGGTTCTGTGTCTATGGTGCTCCTCGTGCGGCTGGTGTGCTAG
CGATTTTCAGGCAGGGAGAGGATAGGGTTCCCCTCCGCCGGTGGTTTTCCTCACCAGCTCGCCGAGGAAGCCGGAGCTTA
TGAGTTTTGTTCTTGGCCCCTGCTGCTATTTCAACCTGGCAGTTTTCCCTCTTTCTCGCCCGGCCTCTGGTTTTGGGTCT
GGTTGGCTCTAGGCGAGTCGCCGTCGACATGTCAGGAACGCCTGGTTCCGCTCCAGTGGCTTCCCTGGGTACCATCCAGG
CATGTTCTAGGGTGAACTAGTCCATCGCTCAACGGTGCGGCGCCTTTCGAGCCAGGCGAGGAGACAGGGGTCTTCTTTGA
CGATGGACTTGTCTCGGTGTGTTTCCCCCAAGCCCCTGGTGTTCTGGCAATGGCTTGCCTCTCATCGTCGTCGTCTCCTT
GCATTGAGCCGGCAGATACCTTCCCTAAGGTTGTGTGCGTGCAAGAGGGCCCTAGCATCCCCTAGCTGTTAGCTTCATGT
TATCTAGTTGGTTGTGTGCTATGTGAGCTGCCTCCCAGCGCCTTTGTATCTTTGCCGTTTTCCTTTTCTCTCTGTGGTTC
GTGGTTGTAATCTTTGTTATCCTGGCCGGTTGTTGGCTTTGTTAATTCAAAACCGGGCTCTTTCTTGAGCCTTCGTTTTA
AAAAAAAGCAAGATTATCTGTCCACTATTGGACTATGAAATCGGTCAAGCAGTGCAGATTCGCCATGATATCTTTTTTTT
AGGGAAGATTTGGGCAATACCTATTTGGCGCTTCAGGTGCCAATCTCTACTGTTTTTGCAAAACGGCACCTGAAGCAGCT
CACTCGCGCGTCTAGTTGGGCTGGCTTATATTTATTTTTCTGTTTTCTTTAACGCGCCAAAAAAACTACAGGTGCATAGG
CGTGATTACTATAGCTTTTCATTTCATTTCTTCTTTCTCTTTTCCTGGAACTGTTTTGTAAGTT-----TTTTCTTTTTC
TTTTTCTTTTCTTTTTTCTTTTTTCTTGGAAAGGTTGTGTTCATTTTTTCAATAATTCTA--TTTTTG-CTAAATGTGTT
ATCATTTTCTTCCAATACATGAACC-TTTTTTCAAATCGTTGAACTTTTCTTCAAGATCGATGAATTTTTTTTCTAAATT
CAATGAACTTTTT---AAAATCAATGATTTTATTTTTCAAT-TTAT---ACATTTTTCAAAATCGCATAACTTATTTCAG
AATCGATGAACTTTTTTCAGATTCGATGAAACTTTTCAAATTTTTCGATGACTTTTTTAAAATTCAATGAACGTTTTTCA
AATTCGATAAAATTTTCTCAAATTCAATGATTA-TTTTCAAATTTGATGAACTTGTTTTCGAATTTGATGAACTTGTTTT
CAAATTTGATGAATTTTTTTC-----------------TTCATATTTGACAAACTTTTTCAAATTTGATGAACTTTTTTT
ATAATTCAATGAACTTTTTTAAAAATCGGTGAAATTTCTTAC-AAAATCGATGAACTTTTTCAAATATGTGAACTTACTT
ACAAAATCGATGAACTTTTATTATTTTGCGCCAACTTTTTCCATTTTCTATGAACATTTTTTTAAATTCGTGGTTGTTTT
CAATGTTTTTAGAATTCTTTTTCAAATTAATGC-TTCATTTGAAAAATAATTTATTTGGTGTATATAATATATGTTAATT
AAAGGAAGATTCAA--------GTTTCCGAATTGTTGCCAACAGCAGGCGCTCAACGTAGTGGTTATTAGCGGCATCTGC
CAAGGCTCGCGTTCAGAGTTCGAATACCGCTTCTCCAATGACAGCGACTGGAACACCTCTTTTTCAAAAAAAGAAATCCG
ATGTGTTCGAGCATTTTGGTGGGCCGAC
>chr1A_516
CATCATCG------------------------------------------------------------------------
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--------------------------------------------------------TCAAATTTAATCAAGAACAGCTGC
ATAACCACAATTTTGGCTGCCACAAATTGAGCACCTGCATTAATATATACCGTCACTGTGAACCTTTTGCGGGCATAAAA
CCTTTGTGAACCTCCAGCCCGCAAAGTCTCTTTTACCGATGGCGGGATGTACCGCCACAACATCCACCACACAGCGCCTT
TAAGATCCATGCAGTTTTGGTCCTACTCCATAAGTATAGCTATGTATTGTCCAACCTCAGCTTTGTATCTCAGCACTTAA
GTCAAATCAGTGGTCCCCTCCATCCCATCCACGCATGCATGCACATATTATCTCTCCTCCCCAACATGCATGACACGGGC
ACAATCGGTCTCATCTCTCCCTCACTAAATTCATGTCCTTTTATTTCTCTTTAATAATTTCAATCATTCATATCTTTTAA
GCTACAATTTTTTTGAAACTTTTTATATATTTGAATTCCTAGCGACGAGACCTTTCGAACAAGACCAATTTTCAATGCAT
TTAAACTAGTTTCAATTTTGCCGTTTCAAACAAATTTATGTTGTCAGAACTATGTTAAAAATCCATGTATTGAAATAAGT
GAAATTATTTCAGAATTCAGTGAAATCCAGTTTTTAAACGAGTGAAATTGTTAAAAATGATAATTATTTTGAAATAAGTG
AAATAACCTTTCTATAACAAGTGAAATTATTTTCTTGAAATGAGTGAAATCTTTTTTTTTCATACACATGATAGATATTC
CAGTGTGAAATACGTGAAACTTGTTATTACAAAGTTTTGAAACTATTTATTTGATACAAGTGAAATATGTGTTTTAAAAT
GAACAAACTCACTTTTCCAAAATATGTTTTCTCTGAGTGAAATCTGTTTTTCGAAACGGCTAAAACTTGTTTTCTTAATT
GTGTGATTTTTTTCTCTAAATTGAGTGAAATCGGTTATTTCAAATAAGTGAAATCAGTTTATTTAAGATACGTGAACCAA
TTGTTTTTGTAATGAGTGAAACCTTTTTTAACTCATGAAAAATAAATTTCTCAAAGGAGTGAAATGTGCCTTTTCAAACT
AGTGAAATACATTTTTTCTGAATTAAGTGAAATAGGTTTTTCGAATTGAGTGAAACCTATTTTATGAAATAACTGAAATC
ATTGTTTGAATGATTGAAATCTCTTCTTGAAATGAGTGAATATAATTTCTGAAACGAGCAAAATCTGTTTTATGAAGTGA
GTGAATTTGTTTTTTCAATTGAGTGAAATCGGTTTATTTAAAGAACTGCAATGAGTTATTCAAAACGAGTGAAATTAAAT
GAGTGAAGTTAGTTTGTAAGTTCCGTATTCCAGCCTGTGAATTTCTTTGAAACCATATATAACACTTATATGAAATAGTG
AAACCTTTTGATGTTTTATGAAACTGATTTCGCAGATAATTGAAATATATACAAAAAATGTAGTTCAAATATATCCAAAA
TTGATCTTGTTCTCAAGGTCTTCACAACACGAGTTCAAATATATAAAAAGTTTTAATAATGAACTTTTGGTTCAAAAGAT
ATGAATCGTTAAAAATCTGAGAATAAAAATAAAATGCATGTTCAGTGTATGTGGAGATAAAATATTTTAACATGCATGCA
ATGATTACCCGCAAAAAAAAAACATGCATGCAATGATGAAAAGCGGTGCTTCGCTTGACACGTCATCTCTCTCTTGACAA
AAATTGAAAAGACATGCAAAGGGCCTACATGTATTCTCTTTGTATTGCATTAACTTGTTCTATACCTCAAATAGCTGCAC
GAATCCCTAAAATTGCATGGGTGGCTGACCGGTACATTCCGCCACCGGTAAAAAAACTTATTCGGGAGGCCTCAACCAGT
CTCTGTCCTGCGCGGCAAACGTCCCA-GCGGTTCTGAAACAGGCCACGTCGCCATTATTGGTAGCTTACCAATTGACGAG
GAGTTTTGGCATTGCACCTGCAGATTTACTCGAAAGCGTCAGCTCTACCATCTCTTCGCCGATCGTTAGATCAGTATCAA
ATCGACTGCAAGCTTTAGCAGAAACAGTTTGGACGCAGACATGCCCTGTAGCTGATTGTGATCTCCGCCGTCGCCGTCGG
CCCGGCTGGGCAGCTGATGCGACGAGGCGACGGATCGCAAAGGTGATACAGTTTCATCCCTCTCATCTCGATCAGATTCG
CGCCTATAAGTTATGGGCGCGGAAGCTGCGTTGTACTTGCAACCAAACGGAATTAGCGTTAGACACGTGCTTCGCCGGCC
----AGCCATGGGGAAGAAGCCGGAGAAGGAGAATCCGAGGAAGAAGAAGCTGGAGAAGGTGCAGAGCGCGGCGCAGCAG
CAGAAGGGGAAGCTCTACATCATCGTGGCCTGCATCACCCTGCTCGTCTGCGGCTACTGCAGCAAACAACAAAAGCGTAC
GTGTGCATATCAATAAGAACCATGCA-----------------ATACGTACGTACGTAAAGCCTATGAACAGCAGAAACA
TCAATGTTATACGCTTTCATAGAGTATC----------------------------------------------------
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---------------------------------------------------ATTATGAGCTACTGACAGATTGGTTCAAG
TTACTTATCGAAATACAGTCTTTGCTTATATGATTGCAGGTCAGAAACGGGATAGGAAGAAGTAGCTGGCGAAGAACCAC
AGA---TCGGCAAAAATACCATCATCATAGAGTATCATTTTCCTTTC--TAGCTACTGGACTTGATTGGTAGGCTGGTAG
CATAGTAACGAGAGGGTGAAGTACTGGATATATAGTTTGAAGTTTGAA--------------CGCGCCAATATCGTTCAT
ACTACTGCTTGGTAGATTGATGTTATCCGTGGACTGCTCGGGAGACAAAACGAAGAACACGAGCCAG---GGAGTAAAGA
GAACAGGAATGAGCAATATAGTTAAGATATCTCTTCTCGCCTACATGCCTCCGTTT-------------ATGGAACAAGC
ACGAGAATAAAAACGTGAGGAAGCCTTAG----TTTGCACATGTAAAAGAGCCTTTTGTGTGATTTGGAGCTAGCTAGGT
CGGGAGGCCGAATACACACCCAATTAGAGCCTTTT---GTATTTGCTTTTCAAGTTGATGCAGAATCTCTGCTTTGTAAA
GCGATTGGGTTTTATATAAAGACCACGAATGTAAGGAAATGGA-GAGGCTAGCTGTTACAACATTATCTGTCCACTAC--
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----------------------------TGGACTATGAAATTGGTCAACCAGTGCAGATTCGCCATGATGTC--TTTTTT
AGGGGAGACTCGGGCAATACCTATTTGGCGCTTCAGGTGCCAATTTCTACCGTTTTTGCAAAACGGCGCCTGAAGCAGCT
CACTCGCGCGTCTAGTTGGGCAGGCTCATTTTTTGTTTCCTGTCTTCTTTAACGCGCCAAAAAACCTGCAAGTGCATAGA
CGTGATTACTATAGCTTTTCATTTCATTTCTTCTTTCTCTTTTCTTTGAACTGTTTTGTTCATT-----TTTCCTTTTTC
TTTT------CTTTGTTCTTTTTTCTGGGAAAGGTTTTGTCCATTTTTTCTATATTTCTATTTTTTTG-CTAAATGTGTG
ATCATTTTCTTCCAATTCGTGAATGTTTTTTCAAAATCGTTGAACCTTTCTTCAAGATCGATGAACTTTTTTTAA-----
----------------AAAATCAATGATTTTGTTTTTCAAA-TTTATGAATATTTATCAAAATAGAAGAACTTATTTCAG
AATTGATGGTT--------------------------------------------------------------TTTTTCA
AATTCGATGAACTTTTCCCAAATTCAATGATTATTTTTCAAATTCGATGAACTTTTTTGA-AATTTTATGAACGTTTTTT
CAAATTCTATGACATTTTTCAAAATTCTACAAACTTTTTTCATATTTGACAAACTTTTTGCAATTCGATGAACTTTTTTT
----------------------AAATCGGTGAACTTTCTTAC-AAAATCGATGAACTTTTATCA----------------
------------------------TTTCCGCAAACTTTTTCAATTTTCTATGAACATTTTTAAAAATTCATGGTTATTTT
CAATATTTTTAGAATTCCTTTTCATATTAATGCATTCATTTGAAAAATAATTTATTTAGTGTATATAATAGATGTTAATT
AAAGGAAGAGTCAA--------GTTTCCGAATTGTTGTCAACGACATGCGCTAGACGTAGTGGTTATTAGCGGCGTCTGC
CAGGGCTTGCGTTCAGAGTTTGAATCCCGCTTCTTCAATGACAGCGATGGGAACACCTCTTTTTC----AAAAAAATCTG
GTGTGTTCGAGTATTTTGGTGGGCCGAC
>SNPs
-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
-S-S-S-------S--------S------S---------------------S--------S--S----SS----S-S-S-
-------S--SS-S-S-S--S------------SS--------------S-S----S------S---------------S
--------------SSS----S----S--------SSSSSSSS------S--S--------------S---------S--
----S---S-S--------S--S----------S-----S--------------S----------S---SS---SSSS--
--------S-------------------------S----S--SSSSSSSSSSSSSSSSS-----------S---------
-----------S---S---S----S-------------------S---------------S-------------------
-------------------------------------------------------S-------------S----------
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-S--------------S---------------------------------------------------------------
--------------S----------------------------------SSS--S-------------------------
---S----------------------------------------------------------S-----------------
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--------------------------------S-----------------------------------------S-----
--------------------SSSSSS-SSS--SSSSSS-------S--------------------S-------------
-------------------------S------------------------------------------------------
------S--------------------------S----------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------SSS-S-------
------------------------------------------------SSSSSSSSSSSSSS------------------
---------------S----------------------------------------------------------------
----S---------------------S-----------------------------------------------------
---------------------------SSSSSS---------------S-------------------------------
----------------------------S-----SSS-------------------------------------------
--------------------------------S-----------------------------------------------
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-S---------S------S--------S---------S-----------S----------S-S-----------------
----S---S-------------------S----------------------------S---S--------------S---
----------------------------------------------------------------SSSSS----S-----S
-S--------S-----S-----------S---------------------------------S----SS-------S---
-S---------------S---S-SSS-------------S---------------------------S------------
-S-----------SSS-------------S----S------S--S-------S-------S-------------------
-------------------------------------------------------------------------------S
-------------------------------------------------------------------------------S
--S----S-----S-------S-S-SSSSS-------------------------------------------------S
--------------------------S-------------S-S-------------------------------------
-----------------------------------------------------------SS-------------------
--S-S------S--S-SS-----S---------S---------------------S------S-----S---------S-
S-------------SSSSSSSS-----S-------------------S--------------------------------
----------S----S-----------S-S-------S-----------S--------------SS--S-------S---
------------------S---------
>forward_281
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---------------------GCTAGGTCCAACCACCCAAA---------------------------------------
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>reverse_5539
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------------------GCCTATTTGTCGCTTCAGGC------------------------------------------
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