>input_sequence_61115
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----------------------------------------ATGGGCGCAGAGGCTCTGCTCCGGCAGCAGGAGCCATGGT
TCGTCTCGCTGGCCATACTTGGCGCCCTCTACGTCGCGGCCTTCGCGTGTCGCCTCCTACACATCTCCGGCATCGCGCTC
TGCCTGCGCGGCCCCAAGGACCTTCGCCGCCGCTATGGGGCGTGGGCCGTCGTCACCGGCCCGACATCCGGCATCGGCCG
CTCCATGTCCCTGGAGCTCGCGCGGTGCGGCCTCAACCTCATCATCGTCGGCCGCGACCCCGCCAAGCTCCAGAACATCG
CCGGAACCGTCTCCAAAACCCACGGAGTGCTAACCAAGACCGTGCAGTTTGACTTCTCCCTCGTCTCCACTCCTCAAGGT
GAAGCAAGCA-----GCACGCAG-----CA---CTCAAGGAACTACCGTACATGGTACA------TGCTGTACTGATCGG
TCGTG-TTTCGGCAGGGGAAGAGGCGATGGGGCGGCTCCGGCAGGCGGTGGATGGGCTGGAGGTGGGAGTGCTGGTGAAC
AACGCCGGCGTGGCGACGCCGCATGCAACGTACCTCCACGAGGCCGACGCGGAGGCGTGGGTGAGGATGATACGGGTCAA
CCTGTTGGCCGTGACGGAGGTGACAGCGGCCGTGCTGCCCGGCATGGTGGAGCGGGGGAGGGGCGCCGTGGTCAACATCG
GCTCCGGCGCCGCAGAGGCGTTGCCCTCCTACCCGCTCTACTCCGTCTACGCCGCCACCAAGCGCTATGT----------
-----------------------------------------------------------------------------TGC
TCAGTTGTCCAGGAGCCTATACGTTGAGTATAGGGTCAAGGGAATCGATGTGCAGTGTCAGGCACCGC------------
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-----TGTACGTAGACACGAAGATGGTGACGAACATGGTGACGCGGGGAGGGCTCCTGTCCTGGCTGATCTTTCCGACGT
CGGACGCGTACGCTCGTGCTGCGGCGCGCTGGATCGGGCACCGCCGCCCGGTCTGCATGCCCAACCTCGGTCACCGGCTG
CAGTGGTGCTTCTCCCACTTTGTCCCGGATCGCGTCCTCGCCGCGCACCGCCTCCACGAGAACCTCCGGCAGCGGGCCGT
CTTCCAGCAGCTCAGGTCATCATCAGGCCAGAGCACCGTCGGACGTCGTTAG----------------------------
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------------
>chr7D_1_TraesCS7D01G076100
GAGTTGCATCTCTACATTGCAACTTGTCCCCCGCACTGCATTGAAGCTCCGCCGCCACGCGCACAACACCATGCGTGTTG
CGTCGTCAGCTTTCGCCGCCGGCGAGATACGCGGGGTCGCTGCACCAAGTGCGCTATATTGCAGCACCGCCGTCCTGTCG
AGATCCACGGGTTCGTGGCAGCACATATGACGCCTTCCCCAACTCGGGCTCGCAACATGGAAGCCTCCTCCACAAAAACA
CTGGCTCACATTGCAGTAGCTGTTGGCCTGCTGCCATGGCGAGGGATGCGACAGCGGTGGCTGCACGCCGTGTTTTGTAG
CAGCGGCGGCGGTTCTGATGGCGAGGGATGCACAACGGTGGATGCACGCCATGTTTTGCTTGCAGTAGCGGCGGCTGTTG
CCATGGCGAGGGATGGCAAGCGGTCCTCTTGATTTGAACTAATGGTGGTTGCTGGGGATCAGCGGTGGTCCTCGACGGGA
GGATGGAGATTGGGAAAGGAAAGTGGCTGAAAGAAGACTAGCGGACGGGAGGAGATAAGGCTGGGGAGTGAGAGCGGTGG
GTGGGCACACGTGTCGTTCGGAAGAGATAGTTTACGCGAGGGAGAAATCATCTGGATGATTCTAAACGTTTTCCTAAAGT
TTGATCATAGCCTTATATTTACCGAGAGCACTATTTAAATAGGTTATGTTGCTTGTCTCTAGGCGAGGTGGGGCTATTTG
TGAACCGAGGCAAAAGCCAGTCTTTTGGGGCGTGCAATAAATTGATGACGGATCGATTGGGCGTTACGGGCGATCAGTTT
GAGTAGGCCACAAACTAGTAGTACTACCACACAAACTGGTAGTTGGTTGGTAGGCCGTTGATGGGTGATACAGCGGTTTG
TGTCGTCGGACATGGCGTCAAAGCCACAGGCTCTCGACCGACACGCACTACTTAATTAGCACGCGCAGCAACAAGTGAGC
CACACGTGCACACGAGGGGGGAGAGGGACGGCGAGCGCGGATGGGCGCAGAGGCTCTGCTCCGGCAGCAGGAGCCATGGT
TCGTCTCGCTGGCCATACTTGGCGCCCTCTACGTCGCGGCCTTCGCGTGTCGCCTCCTACACATCTCCGGCATCGCGCTC
TGCCTGCGCGGCCCCAAGGACCTTCGCCGCCGCTATGGGGCGTGGGCCGTCGTCACCGGCCCGACATCCGGCATCGGCCG
CTCCATGTCCCTGGAGCTCGCGCGGTGCGGCCTCAACCTCATCATCGTCGGCCGCGACCCCGCCAAGCTCCAGAACATCG
CCGGAACCGTCTCCAAAACCCACGGAGTGCTAACCAAGACCGTGCAGTTTGACTTCTCCCTCGTCTCCACTCCTCAAGGT
GAAGCAAGCA-----GCACGCAG-----CA---CTCAAGGAACTACCGTACATGGTACA------TGCTGTACTGATCGG
TCGTG-TTTCGGCAGGGGAAGAGGCGATGGGGCGGCTCCGGCAGGCGGTGGATGGGCTGGAGGTGGGAGTGCTGGTGAAC
AACGCCGGCGTGGCGACGCCGCATGCAACGTACCTCCACGAGGCCGACGCGGAGGCGTGGGTGAGGATGATACGGGTCAA
CCTGTTGGCCGTGACGGAGGTGACAGCGGCCGTGCTGCCCGGCATGGTGGAGCGGGGGAGGGGCGCCGTGGTCAACATCG
GCTCCGGCGCCGCAGAGGCGTTGCCCTCCTACCCGCTCTACTCCGTCTACGCCGCCACCAAGCGCTATGT----------
-----------------------------------------------------------------------------TGC
TCAGTTGTCCAGGAGCCTATACGTTGAGTATAGGGTCAAGGGAATCGATGTGCAGTGTCAGGCACCGC------------
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-----TGTACGTAGACACGAAGATGGTGACGAACATGGTGACGCGGGGAGGGCTCCTGTCCTGGCTGATCTTTCCGACGT
CGGACGCGTACGCTCGTGCTGCGGCGCGCTGGATCGGGCACCGCCGCCCGGTCTGCATGCCCAACCTCGGTCACCGGCTG
CAGTGGTGCTTCTCCCACTTTGTCCCGGATCGCGTCCTCGCCGCGCACCGCCTCCACGAGAACCTCCGGCAGCGGGCCGT
CTTCCAGCAGCTCAGGTCATCATCAGGCCAGAGCACCGTCGGACGTCGTTAGCGGCGACCTGACCAGCCAGCATAGTTTG
TTGGCAGGAGTAATAAATGATTTTGTTAGCTTGGTATTTATTATTATGTAATGTATCTTTCACAAATATTCTGAATTTTT
CTTATCTGAGGTCGGCGATCTGGACAACAAAGATATAATGTACTGTAGTTTGGTTTTGTGGGACAGCGGAAAAAGACAGA
CAAGAAAATAAAGTAAAAGTGAGATTTTATATTGAGGTAATTTCAATGAATTGAGCTCCGCTTCGGTACACCACCTTAGT
AATAAACATATAAAGCGCAATGTAGACCTTTGACAAATTGTATATACTTTTGTACGTATATAATGAGTCACCATACACAT
TTGGCGGGGTCCTCCTATGTGACGCGCTCTGCGTCAAGTTGTTGCCGTTTCGCACAGGGGGGGCTTCGACTGGGCCGGCC
CATGAAGACAACAACAGAAATCGAACGCGAACTGTAGGCAAAAAAAATTGGTATGTGCTGCCGGGGATTCGAACACAGAC
AATGTGTTCCTGCCAACTGACCTAGCACTTGTAGCTGATCAAATAGCTAGCATCAAACTTAAAGTACAAACAAGCCACGC
AGATCCGAATTAGTTTAGGAATTTTGGAAGCAATATCTTTTCAAAAAAGGGAATCTCCTGTGAAAGCAAGCACTTACCAA
ATTTGTGAACAAGTTTTAAAAAGCTAGAAAATTTTCGAAAACAAGAACATGTTTGAAAATCTTGACCAATTTTTTTGAAA
CAAGAACATTTTTACAAATTTCAAATAAAATTTGGAAATGTGACCATATTTTGAAATCCTGAACAAAATTTCCAAACACG
ATTTTTTTTAAATTGTGAACAATTTTCAAAACTAGAAAAAAATTGAAATTCCTAAAAAAAGAAAACATGACCATTTTTTT
AAACTATAACACTTTCTAAAAATTAACAAATTTTATAAAAACAAGAAGATTTTTTGAAATGCCCGAACAATTATTGAAAA
ATGTAAACATTT
>chr7A_999
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--------------------------------------GGATGGGCACCGACGCGTTCCTCCGGCAGCAGGAGCCATGGT
TCGTCTCACTGGGCATCCTCGGCGCCCTCTACGTCGCCGTGGTCGCGTACCGCCTCTTCCACATCTCCGGCCTCGCGCTC
TGCCTGCGCCAGCCCAAGGACCTCCGCCGCCGCTACGGGGCGTGGGCCGTCGTGACCGGCCCGACGTCCGGCATCGGCCG
CTCGATGGCGCTGGAGCTCGCGCGGCGCGGCCTCAACCTCGTGCTAGTCGGCCGCGACCCCGCCATGCTCCAGGACATCT
CCGAGACCGTCTCCCGAACGCACGGCGTGCTGGCCAAGACCGTGCAGTTCGACTTCTCCCTCGTCTCCACTCCTCGAGGT
GAAGCACCACT--------GCAG-----CA---CACACAGTACTGAAACGTAGAAATAATCCA---GATGTGCTGACTGA
TGGTGTTTTTGGCAGGGGATGAGGCGATGAGGCGGCTCCGGGAGGCGGTGGCAGGGCTGGACGTCGGACTCCTGGTGAAC
AACGCCGGGGTGGCGAAGCCGGGCGTGGTGTACCTGCACGAGGTCGACGCGGAGGCGTGGGTGAGCATGATACGGGTGAA
CCTGTGGGCCTTGACGGAGGTGACGGCGGCCGTGCTGCCCGGGATGGTGGACCGGGGGAGGGGCGCCGTCGTCAACATCG
GCTCCGGCTGCACGGTGGCGCTACCCTCCGTACCGTTCTACTCCATCTACGCCGCCACCAAACGGTA-------------
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>chr4A_999
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--------------------------------------GGATGGGCACCGACGCCTCCGTCCATCAGCAGGAGCCATGGT
TCGTCTTGCTGGCCATCCTCGGCGCACTCTACGTCGCCGCCTTCGTGTACCGCCTCCTGTATGTCTCCGGCCTCACGCTC
TGCCTGCGCCGCGCCAAGGACCTCCGCGGCCACTACGGGGCATGGGCTGTGGTCACCGGCCCAACGTCCAGCATTGGCCG
CTCGATGGCCCTGGAGCTCGCGCGGCGCCGTCTCAACCTCGTTCTTGTGGGCCGCGACCCCACCGCGCTCCAGGACATCT
CCAAGACCGCCTCGGAGACCCACGGCGTGCTCACAAAGACCGTGCAGTTCGACCTCTCCCTCGTCTCCACTCGTCAAGGT
GAAGCACCAGTCACCACACAGACACACACA---CACACACCCACAGCACGT----------------ACGTGCTGATGTA
TCGTG-TTTTGCCAGGGGAGGAGGCGATGGGGCGGCTCCGGGAGGCCGTGGAGGGGCTGGAGGTCGGGGTGCTGGTGAAC
AACGCCGGCTTGGCAACACCGCACGCAGCATACCTGCACGAGGTCGACGTGGAGGCGTGGGTCAAGATGATACGGGTGAA
CCTGTGGGCTGTGACTGAGGTGACGGCGGCCGTGCTGCCCGGGATGGTGGAGCGAGGGAGGGGCGCCGTCATCAACATCG
GCTCCGGCTCCACGGAGGCGCTACCCTCCTATCCCCTCTACTCCGTCTACGCCGCCACCAAGCGGTACGT----------
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>chr7D_1013
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----------------------------------------------------GCTCTGCTCCGGCAGCAGGAGCCATGGT
TCGTCTCGCTCGCCATCCTCGGCGCCCTCTACGTCGCAGCCGTCGCGTACCGCCTCCTCCACACGTCCGGCCTCGCGCTC
TGCCTGCGCGGGCCCAAGGACCTACGCCGCCGCTACGGGGCGTGGGCCGTCGTCACCGGCCCGACGTCCGGCATCGGCCG
CTCCATGGCCCTCGAGCTCGCGCGGCGCGGCCTCAACCTCGTCCTTGTCGGCCGCGACCCCGGCGCGCTCCAGGACATCG
CCGGAACCGCCTCCGACACCCACGGCGTGCTGACCAAGACCGTGCAGTTCGACTTCTCGCTCGTCTCCACGCCTCAAGGT
GAAAGAAAGCACCACGCACGCAG-----CACTCCTCAAGGAACTACCGTACGTGGTACTGGTACGTGCTGTACTGATCGA
CCGTG-TTTTGGCAGGGGAGGAGGCGATGGGGCGGCTCCGGCAGGCGGTGGAGCGGCTGGAGGTGGGCGTGCTGGTGAAC
AACGCCGGCGTGGCGACGCCGCATGCGACGTACCTGCACGAGGCCGACGCAGAGGCGTGGGTGAGAATGATACGGGTGAA
CCTGTGGGCCGTGACGGAGGTGACGGCGGCCGTGCTTCCCGGCATGGTGGAGCGCGGGAGGGGCGCCGTCGTCAACATCG
GCTCAGGCGCGGCGGAGGCGCTGCCCTCCTACCCGCTCTACTCCGTCTACGCCGCCACCAAGCGGTACGT----------
-----------------------------------------------------------------------------TTC
CCAGTTCTCCCGCAGCCTCTGCGTTGAGTACAGGGGCAAAGGAATCGACGTGCAGTGCCAGGCCCCGC------------
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-----TGTACGTGGACACGAAGATGGTGACCAACATGGTGACGCGGGGAGGCCTCCTGTCGCGGCTGATCATGCCGACGT
CGGACGCTTACGCCGGCGCGGCCGCTCGCTGGATCGGGCACCGCCGCCCGGTCTGCATGCCCAACCTCGGCCACCGGCTG
CAGTGGTGCCTCTGCCACTTCGTCCCGGACCGTGCCCTCGCCGCGCACCGCCTCCGCGAGAACCTTCGGCAGCGGGCCGT
CTTCCAGCTGCTCAGGTCATCATCAGGCGAGGGAATCGGTGGACGTCGTTAGCGGCGACCTCACCCGCCAGCAGAGTTTA
TTGGTAGTA-----AAATAATTATGTTGACTTGGTATTTATTGTGCGAA---GTATCTTTCA------------------
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>chr7D_1427
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------TTTTGACAGGGGAGGAGGCGATGGGGCGACTCCGGGAGGCCGTGGAGGGGCTGGAGGTCGGGGTGCTGGTGAAC
AACGCCGGCTTGGCAACGCCGCACGCGGCATACCTGCACGAGGTCGACGTGGAGGCATGGGTCAAGATGATACGGGTGAA
CCTGTGGGCCGTGACTGAGGTGACGGCGGCCGTGTTGCCCGGGATGGTGGAGCGAGGGAGGGGCGCCGTCACCAACATCG
GCTCTGGCTCCACGGAGGCGCTACCCTCCTACCCCCTCTACTCCGTCTACGCCGCCACCAAGCGGTACGTGTCGTGTTAC
AGGAACACACGCTGAGACTGTGAGATTGACTTTTCTTTTTCATATATATATACATGTGGATTTTGGAGCAGGTACGTTGC
TCAGTTCTCCAGGAGCCTATACATTGAGTATAGGGGCAAAGGAATGGATGTCCAATGTCAGGTAAAGTACATCTGCAACC
GTGCGGACAAACCATAACTTCGATGGCTTTGCTTTTTCTCTATTTCTCAAGTGTGCCTGAAATTGTGCTCTCTCTCGGTC
ACTTTTCTTCTTCTTCCGCCCCTCTTGGCCGGACCTCGCCGGACAACATCTATCTTAGGGTGAAGCCATGGCCCTATTAC
CTATATTAGGAGGAAGGCACAGCCCGATTATCTATCTTAGGGGTGGGGATGCAGGGGACCGCCCGAGGTTTTCATCGGTG
ATGTCGGGCTTAGAGGGATGGCCAAGGCTGTGGGAAAGGTTGAGGTGAAGGTGAGGCGGTGCCCCCCGGGCGCATGGGAT
GGAGGAAGACGGATTGGGCGGGGAATGCGGGCCGTTGATGGATCGTATGATGCCTTGAGGAAGAAGACAAATTAGAGGAA
GAAGATGACCTGTTAGCGGTTGGGTGCGGATCGGAAAGACAGAAAAAAAATGACTCATACGAATAGTTTTTTCAACCATC
ATTTAGACTGGGATGCAATTCTTGTGCCAGAGAAACCATAGAAATCACACTGATATGCCATTAATTTGTCCGGTGCAAGC
CCCATTGTATGTGGACACGAAGATGGTGACGAACATGGTGACCCGGGAAGGCCTCTTCTCTTGGCTAACCATGCCGACGT
CGGATGCCTACGCCAACGCAGCTACGTGCTGGATCGGGCACCGCAGCCCGATCTGCATGCCCAACCTGAGCCACCGGCTC
CAGTGGTGCCTCATCCACTTTGTCCCAGACCGCTTCATTGTGGCGCACCGCCTCCGCGAGACTCTACGGCAGCGGGCTGT
CTTCCAGCGGCTGAGGGCATCA----------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-S--S----------------------------
----------------S--S-----------------S----------SS--------S------------S--------
-----------------------S-----------S-----------------------------S--------------
-------S-----------------S--------------S--S-S-------------------S-------S------
--------------S----------S-----S-----------------S------------------------------
-------SSS---------------------------------------------------------------------S
---------S---------S--------------------------------S---------------------------
-----------------------------------S-----------------------------------------S--
-----S------------------S--------------------------------------------S----------
-------------S------S-------------------------------------------S--S------------
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------S----------------------------S---S----------------------------------------
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------------S--------------------------------------S--------S---------S-S-------
-------S-----SS-S--S--S-----------------------------------------------S---------
---------S---S---------------S-------------------------S---------S--------------
--------S-------------------S--S-S-S--SS---------------------S---S-------S-----S
----S--S-SSSSS----S---S----SS-------------S-SSSSSSSS----------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_492
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------------------------------------------------------------------------CGACGGGA
GGATGGAGATTG--------------------------------------------------------------------
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>reverse_2892
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-----------TCGGCGATCTGGACAACAAA-------------------------------------------------
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