>input_sequence_61107
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------ATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGACCAGC
GCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCCGCAGGTATGTGCCGCGCGCTC
ATCGGCGACCAAGACGCGT------GTACGTGTACGGCAACGGGTGA-----ATGATGTGTGTGTGTGTGCATGGTGCGT
GGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTCAAACGGGGCAA
CTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAGTAACAATTCTCATCCTTCTTCT
GACGGTGATATATCAGTGGAGAAAGACGGATCGAT----------CGATCCACGGGCGTACGGCGTTATTTATTTCTTAT
ATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTATTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGACCCGCACACCCACCGCCCGCTCAATG
CCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGCCGCGCACCAACACCAGTACGCTGCTGCCACA
CCCGGGGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCCAGCTCAGCCGAGCCCGCCTGCAGCCA
CAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACGGCACCTCGGCATCGACCTCAACCTCT
CCATCAGCCTGGCGCCCTACCAGCCGGGCGACGACCCGGCGGTGAAACAGGAGGCAGCAACGACGGCGAGCCACAACAAT
GCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCACCTCGGGTTCCAGGGCGCCGGCGAGGGATGCCGCTGCGG
CGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTTTAGATTCATCGCACCGCTAGAGGGCG
GACGCCAATAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4D_1_TraesCS4D01G092900
AAAAATATCAATCAACGTAGATAAATATTCCGAAATTAAAGTGTATGCCCAAAGGAATATGCCTTTGTGGCCTAGATCGC
CATACGCCACCACGCTCGTC------CCATACCTTCCATCTCTCGTGCATCACCTCAATA--TTTGAAAATTTGAAGGGC
ATAC-ACAGGGCAATTGCTCATCAAAACGGTCGCCGCAGGTAAGAAATAAGATAGTATCGCCCTTTTGTCCCGGTCGCCG
GCGGAAC-CGGAAAACTAATATAGTTGCATTTCCTAAGTA--GTAAGATATTTTCGACCAACCGCCAAGTATTTT-----
-----------TTTGCGGGACAAACGTAGAATTTTCATGTAAAAGAACTAGTCATTTGATGTTGAACCACTCCCCCTCCA
AAAACCAAGAACTGAA-CCTCACCCCAAAACCCAGCCCCGTTGCATTCATTAGGCTGCACTTACTCCTGCTGGTGT--GC
TCGCCGGGTACACCTACCAACTAGCCCCCCTCCTCCCCCAAAAGAAAAACGA---AACGAAACGAAAAAAAAATCACGAA
GCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCTCTCCTC------CTCGCTCGC
TCTCAAAAAGCTCGCACGCACGCACGCACCACCAACACCGCACCGCTCCTCCTTTCCCTCAGACCCACCCACAGCCACAA
CAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGGCGGCTCCTGTCTTCAACGTACCTACGTGCCG------GCC
GGCGG----CATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGACCAGC
GCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCCGCAGGTATGTGCCGCGCGCTC
ATCGGCGACCAAGACGCGT------GTACGTGTACGGCAACGGGTGA-----ATGATGTGTGTGTGTGTGCATGGTGCGT
GGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTCAAACGGGGCAA
CTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAGTAACAATTCTCATCCTTCTTCT
GACGGTGATATATCAGTGGAGAAAGACGGATCGAT----------CGATCCACGGGCGTACGGCGTTATTTATTTCTTAT
ATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTATTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGACCCGCACACCCACCGCCCGCTCAATG
CCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGCCGCGCACCAACACCAGTACGCTGCTGCCACA
CCCGGGGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCCAGCTCAGCCGAGCCCGCCTGCAGCCA
CAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACGGCACCTCGGCATCGACCTCAACCTCT
CCATCAGCCTGGCGCCCTACCAGCCGGGCGACGACCCGGCGGTGAAACAGGAGGCAGCAACGACGGCGAGCCACAACAAT
GCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCACCTCGGGTTCCAGGGCGCCGGCGAGGGATGCCGCTGCGG
CGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTTTAGATTCATCGCACCGCTAGAGGGCG
GACGCCAATAGTAGCACTAGCAACAGTAACATTCGGACATAC--------AACTAAAGCCACACATGGTTAATTATTAAT
TAAACTAGCTAGCTCTCTGTAACATGTTCATGAGGAAATTAAATCTACTACTCCTTTCCTATTACGTAATTTGC------
-AGCTAGCATCGGGCCATGCATGCATATGCATCATCGC-----CTAGGTGACATAGTTCATGAATAGATCATCAGCTAGC
AGCTCCTACCTTCTTTCCTTCTTGTCTTCATTAATATTGCCATAGGAGGTTCATCATCTTCCACTAGATCTAATCAAGCG
TATCCCTAATTTAGGGGAGTTAGGTTCATCATCTAGGGAGTGAGTGATGCA-------GACTGATGAGAGTGGGAGTGAG
CGTTATGGTGCTGGCTGGTGGTGGTTATGGGAAGTTAGGTTCTTGGATGTCTGCAAGGTAGCACATGACATGGCCATCCA
GTGACATCACTGAATGGTTGAGTTTTCTATGCATAAAAAAAGGTTTGTCCGCCTTGTAGAGAGGAGAGGGGGAGTGGGAG
TGGGCAGCATGTGAGATGCCCATATTTTCTGGTTAGGTTGGTAGGTAGAAGGTATGGGAGAGGTGTTAATGAAGGGGATA
AAGTGCCATGGAGGAGGAGGAGGGG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGGGGCATGGACTGAGGAGCTTTTTGGTTAGTTAATGACTTA
ATGGTCAGAGAGCTTGGCTTGTGCTGTGTCTGGCCTTCTTGGGGGTGGATGTGGATGCCGGAGTTGGTGGGCTAATTAGT
AATTTAATCATGGATCAGTACCACAGTTATCTAAAGCCAGCTTCAGGTTTTTTGAGGCGGATGGGGGCCAGTCAGGGTAT
CAGTAGTTTGTTCGGTCTGTCATGTTGCTCTACAGCTATTTGATCCAC--------------AGGTATTCCAGTTTGCAG
CAACACAAGACATAAATAGGCCTTTGAGCAGTCTGGATCTTTGGGAGCTGTTTCAACCTAACATAAGTACTTGTCCTTAT
GTGCCCACTTATCGAACAATCCCGT
>chr4A_1
AAAAATATCAATCAACGGATATAATTATTCCCAAATTAAAGTTTATGCCCAAAGGAATCTGCCTTTGTGGCCTAGATCGC
CATACACCACCACGCTCGTATCAATACCATACCGTCCATCTCTCGTGCATCACCTCAATATATTTGAAAATTTGAAGGGC
ATAC-ACAGGGCAATTGCTCATCGAAACGGCCGCCACATGTAAGAAATAAGATGGTATCATCCTTATGCCCCGGTCGTTG
ACAGAGATGGAAAAACGAATGTAGTTGCATTTCCTAAGTA--GTAAGATATTTTCAACGAACCGCCAAGTA--TT-----
-----------TTTGCGGGGCAAGCGTAGAATTTTCATGTAAAAGAACCAGTCATTTGATGTTGAACTACCCTCCTTCCA
AAAACCAAGA------GCCTCACCCCAAAACCCAACCCCGTTGCATTCATTAGGCTGCACCTACTCCTGCTGGTGTGCGC
TCGCCGGGTACACCTACCAGCTAGCCCCCCTCCTCCCCCAAAAGAAAAATGA---AAAATG----AAAAAAAATCAGAAA
ACGAATAATAAATAAGCAGAAAAGAAAGGGAGGGGAGAAGGAAGGGAATAGGACAAGCGGCAGTCGAGCAGAAGAAGCGG
AGCATACCTACCTACCAAATCCAGGCCTAGGGCTTTGCAACCACTCGCCCCCACCTCCCCCCTCTCCTCTCATCGCACCA
ACTCGGTCAAATGGCCCAGAGGGATCCGCGTCAATGGGGCCCCGCTCCGCTCCACCCCCATCCTCCTCCTCCC-------
---------------------CGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCTCTCTCCTCCTCGCTCGCTCGC
TCTCAAAAAGCTCGCACGCACGCACGCACCACCAACACCGCACCGCTCCTCCTTTCCCTCAGACCCACCCACAGCCACAA
CAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGCCGGCTCCTGTCTTCAACGTACCTACGTGCCG------GCC
GGCGG----CATGGGGAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGACCAGC
GCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCCGCAGGTATGTGC----CGCTC
ATCGGCGACCAAGACGCGT------GTACG------GCCATGGGTGA-----ATGATGTATGT----ATGCATGGTGCGT
GGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTCAAACGGGGCAA
CTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAGTAACAATTCTTATCCTTCTTCT
TCTGATGATGCATCAGTGGAGATAGATAGATCGGT----------CGATCCACGGGCGTACGGCGTTATTTATTTCTTAT
ATATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGACCCGCACACCCACCGCCCGCTTAATG
CCATCGCGGGGGCCGCCATGCCGGCGCAGCAGC---------TCCGGGTCGCGCACCAACACCAGTACGCGGCTGCCACA
CCCGGTGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCCAGCTCAGCCGAGCCCGCCTGCAGCCA
CAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACGGCACCTCGGCATCGACCTCAACCTCT
CCATCAGCCTTGCACCCTACCAGCCG---GACGACCCAGCGGTGAAACAGGAGGCAGCAACGACGGCGAGCCACAACAAT
GCAACAACGTCCACGTCGGCGGCGTGCATGTGCTTGAACCGCCTCGGGTTCCAGGGCGCCGGCGAGGGATGCCGCTGCGG
CGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCA---CGCAGCACATGTTCAGATTCATCGCGCCGCTAGAGGGCG
GACGCCAATAGTAGCACTAGTAACAGTAACATTCGGACATATACCTTTTTAACTAAAGCCACACATGGTTAATTATTAAT
TAAACTAGCTAGCTCTCTGTATCATGTTCATGAGGAAATTAAATCTACCCCCTTTCTAT-------TAATTCACAGCTAC
TAGCTAGCATCGGGCCATGCATGCATATGCATCATCATCTAGTCTAGGTGACATAGTTCATGAATAGATCATCAGCTAGC
AGCTCCTACCTTCTTTCCTTCTTGTCTTTACTAATCGTGCCATAGGAAGTTCATCATCCTCCACTAGATCTAATCAAGCA
TATCCCTAATCTAGGGGAGTTAGGCCCATCATCTAGGGAGTGAGTGATGCA-------GAGTAATGAGAGTGGGAGTGAG
CGTTATGGTGCTGGCTGGTGGTGGTTATGGGAAGTTAGGTTCTCGGATGTCTGCAGGCTAGCACATGACATGGCCATCCA
GTGACATCACTGAATGGTTGAGTTTTCTATGCATGAAAAAGGGTTTGTC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr4B_103
--------------------------------------------------------------------------------
----------------------------ATACCTTGCATCTCTCGTGCATCAGCTCAATATTTGA-AAAAAATGAAGGGC
ATGCAACAAGGCAACTGCTCATCGAAATGGCCGCAA-AGATAAGAAATAAGGCAGTACCTCCCCTTTTGCCCCAGTCGAC
GATAGAGACGGAAAACCAATATACTTGCATTTCCTAAGTATAGTAAGATATCT--GACCAACTGCCAAGGACCCAAGGTA
TGGAATTTTTCTTTTCGAGGCAAGTGTAGAATTTTCAAGTAAAAGAACTAGCCATTTGATGTTGAACTACCCTCCCTCCA
AAAACCAATAGCCTCTGCCTCACCCCAAAACCCAACCCCGTTGCATTCATTAGGCCGCACCTACTACTGCTGGTGTGCGC
TCGCCGGGTACACCTACCAACTAGCCCCCCTCCTACCCCCAAAAGAAAAAAAAACAAAATG----GAAAAAAACCACGAA
GCGAATAATAATTAAA-AAAAAAGAAAGAGAGGGGGGAGGAAGG-GAATAGGACAAGCGGCAGTCGAGCAGAAGAAGCGG
AGCATACCTACCTACCAAATCCAGGCCTAGGGCTTTGCAACCACTCG-CCCCACCTCCCCCCTCTCCTCTCATCGCACCA
ACTCGGTCAAATGGCCCAGAGGGATCCGCGTCAATGGGGCCCCGCTCCGCTCCACCCCCATCCTCCTCCTCCCCTCCTCC
C--------------------CGTATAAAACCAACTACCCACCCCCGTCTCCCCTCTCTCTCCTC------CTCGCTCTC
TCTCAAAAAGCTCGCTCGCTCGCACGCACCACCAACACCACACCGCTCCTCCTTTCCCTCAGACCCACCCACAACCACAA
CAGCATATATCATCAGTCCGTTACTCGTGTGCGGCGCCGGCGGCATCTCCTCCTGTCTACGTAGGTATCGTATACGTGCC
GGCGG----CATGGGTAGGTCCCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGACCAGC
GCCTCATCGCCTACATCAAGGCCCATGGCGAGGGCTGCTGGAGGTCCCTCCCCAAAGCCGCAGGTATGTGCCGCGC--TC
ATCGGCGACCAAGACGCGTCTAGGTGTACG------GCGACGGGTGA-----ATGATGTGTGTGTGTATGCATGGTGCGT
GGTGCAGGGCTGCTGCGGTGCGGGAAGAGCTGCAGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTCAAACGGGGGAA
CTTCACCGAGGAGGAGGACGAGCTCATCATCAAGCTCCACGAGCTGCTCGGCAACAAGTAACAATTCTTGTC---CTTCT
GATGATGATATATCAGTGGAGATAGATAGATCGAT----------CGATCCACGGACGTACGGCGTTATTTATTTCT---
-TATCGTGTCGGTCTTGCGCTTGTGCTCTCAGGTGGTCGCTCATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGGCCCGCGGCATGGACCCGCACACCCACCGCCCGCTCAATG
CCATCGCGGCGGCCGCCATGCCCGCGCAGCAGCAGCAGCAGCTCCGGGCCGCGCACGAACGCCACTTCGCTGCTGCCACA
CCCGGTGGCCACCACCTCCAGCCGCAGCAGCAGGATCCCTTCGCGGCTCTCTCCAGCTCAGCCGAACCCGCCTGCAGCCA
CAGCAGCGACGACGAGCCGGCCGGCTCCGCCACGCCGCCGCCACCGTCGCGACGGCACCTCGGCATCGACCTCAACCTCT
CCATCAGCCTCGCGCCCTACCAGCCA---GACGACCCAGCGGTGAAACAGGAGGCAGCAACGACGGGGAGCCAGAACAAT
GCAACAACGTCCACGTCGGCGGTGTGCATGTGCTTGAACCGCCTCGGGTTCCAGGGCGCCGGCGAGGGATGCCGCTGCGG
CGGCGCTTCCTCCGTGCCCATGCAGCAGCAGGCCAGCAGCGCGCAGCGCATGTTTAGATTCATCGCACCACTAGAGGGAG
GAGGCCAATAGTAGCACTAGTAACAGTAACATTCGGACATATACCTTTTTAACTAAAGCCACACATGGTTAATTATTAAT
TTAACTCGCTAGCTCTCTGTAACATGTTCATGAGGAAATTAAATCTACTCCCTTTCTAT-------TAATTCGC------
-AGCTAGCATCGGGCCATGCATGCATCATCA-----------TCTAGGTGACATAGTTCATGAATAGATCATCAGCCAGC
AGCTCCTACCTTCTTTCCTTCATGTCTTTATTAATATTGTCATAGGAAGTTCATCATCTTCCACTAGATCTAATCAAGCA
TATCCCCAATTTAGGGAAGTTAGGTTCATCATCTAGGGAGTGAGTGATGCATAGTGATGACTGATGAGAGTGGGAGTGAG
CGTTATGGTGCTAGCTGGTGGTGGTTATGGGAAGTTAGGTTCTTGGATGTCTGCAGGCTCGCACATGACATGGCCATCCA
GTGACATCACTGAATGGTTGAGTTTTCTATGCATAAAAAAGGTTTGT-----CTTGTAGAGAGGAGAAGGGG------AG
TGGGCAGCATGTGAGATGCCCATATTTTCTGGTTAGGTAGGTAGGTAGAAGGTATGGGAGAGGTGTTAATGAAGGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGGCATGGACTGAGGAGCTTTTTGGTTAGTTAATGACTTA
ATGGTCAGAGAGCTTGGCGTGTGCTGTGTCTGGCCTTCTTGGGGGTA----TGGATGCCGGAGTTGGTGGGCTAATTAGT
AATTTAATCATGGACCAGTACTACAGTAATCTAAAGCCAGCTT---GTTTTTTGAGGCGGATGGGGGCCAGTCAGGGTAT
CAGTAGTTTGTTTGGTTTGTCATGTTGCTTCACAGCTATTTGTTCCTTCTCATTCCATGGCAAGGTATTCCAGTTTCCAG
CAACACAGGCCATAAATAAGCTTTTGAGCTATCTGGATCTA----AGCTGTTTCAACCTAACATAAGTACTTATCCATCT
ATGCCCACTTATCTAACAATCACGT
>chr5D_985
--------------------------------------------------------------------------------
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----------------------------------------------------------------CGTGCCG------GCC
GTCGGCGGACATGGGGAGATCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGATCAGC
GGCTCATCGCCCACATCAAGGCCCATGGAGAAGGGTGCTGGAGATCGCTCCCCAAAGCAGCAGGTACAACATACTCCTAT
CTTTATTTGGTATGCGGACTCAACATTGGCATGCATGCCGGCCGTGTGGGAGGTGATGTTGATTCGTGTGCATGTACTC-
-GTGTAGGGTTGCTGCGTTGCGGAAAGAGCTGCCGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTTAAGCGCGGCAA
TTTCACCGACGAGGAGGACGAGCTCATCATCAAGCTTCACGAGTTCCTCGGAAACAAGTAAACCATCTAAGCCCCAGCTT
GCTATGGCCATCGAAAAATCTGAACTGAAATATATGTGCCGGATGCGATGTAATGGCGGACGGCGGTGATATTGATTATT
GGCTTCCTTGCTTTG--------------CAGGTGGTCGCTGATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTACTGGAACACGCACGTCAAGCGCAAGCTCCTCGCCCGCGGCGTCGACCCGCAGACCCACCGCCCGCTCAATG
C-------------------------------------------------------------------------------
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-------------------------
>chr5B_986
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------GTGCCG------GCC
GTCGGCGGACATGGGGAGATCGCCGTGCTGCGAGAAGGCGCACACCAACAAGGGCGCCTGGACCAAGGAGGAGGATCAGC
GGCTCATCGCCCACATCAAGGCCCATGGAGAAGGGTGCTGGAGATCGCTCCCCAAAGCAGCAGGTACAACATATA--TAT
CTTTATTTGGTATGCGGACTCAACATTGGCATGCATGCCGGCCGTGTGGGAGATGATGTTGATTCGTCTGCATGTACTC-
-GTGTAGGGTTGCTGCGTTGTGGAAAGAGCTGCCGGCTGCGGTGGATCAACTACCTGAGGCCGGACCTTAAGCGCGGCAA
TTTCACCGACGAGGAGGACGAGCTCATCATCAAGCTTCACGAGTTCCTCGGAAACAAGTAAGCCATCTAAGCCCCACCTT
GCTATGGCCATCGAAAAATCTGAACTGAAATATATGTGTCGGATGCGATGTAACGGCGGACGGCGGTGATATTGATTATT
GGCTTCCCTGCTTTG--------------CAGGTGGTCGCTGATCGCCGGGAGGCTGCCGGGGAGGACGGACAACGAGAT
CAAGAACTACTGGAACACGCACGTCAAGCGCAAGCTCCTCGCCCGCGGCGTCGACCCGCAGACCCACCGCCCGCTCAATG
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>SNPs
-----------------S-S----S------S----------S---------------S---------------------
-----S-------------S------------------------------------------------------------
-----------------------S------S----S-----------------------S--------S--------SS-
--S---S---------S------------------------------------------------------SS-------
-------------------S---S-------------------------------------------S--S-S-------
----------S-SSSS------------------S-------------------------S-------------------
-------------------------------------------------S-------SSSSSSSS---------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------SSSSSS--S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--S-S---------------------SS----------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------SSS--------S------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------------S--------------------------------------
-------------------------------------------------S-SSS-S-SSSSSSSSS-----S--------
------------------------------------SS------------------------------------------
----------------------------S------------------S-------------------------------S
--------------------------------------------------------------------------------
-------------------------------------------------------S-S----------------------
----------------------------------------S--------SSS---------------S----SSSSSS--
--------------------------------------S-------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------------------SSSSS-----------------------------
--------------S------S-----S---------------SSS----------------------------------
------------S---S------------SS-----------S---SS----------------------------S---
-------S-S--------S--S-------SS---------SSSSS---------------------------S---S-S-
S------------S-------S---
>forward_435
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AACCTCACCCCAAAACCCAG---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_1610
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------TTGGAACACGCACATCAAGC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------TGCATTCATTAGGCTGCACT-------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_1958
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------GGCGGTGAAACAGGAGGC-------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1931
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TCAACCTCT
CCATCAGCCTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_3299
--------------------------------------------------------------------------------
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------------------GGCCTTTGAGCAGTCTGGAT------------------------------------------
-------------------------
