>input_sequence_61058
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------------------------------------------------------------------ATGGCCTCCCCGTA
CAATCCCCACCGGCGGCAGCTGGGCGGGGGGCAGTCCGCCTGGCCGGATCTCCCACCGGAGCTCCTGGAGAGCGTCCTAG
GGCGGCTCGCCCCGCTCGACCGTGTCGCCGTCCGCCTCGTCTGCTCCTCGTGGCGCTCGTGCGCGCGAGCTTCGATCTCG
GCTGACCTCCCCTTCGAGGCCCCGCGCCTCCTGCTCCGGCGCCCCGGCTCCTGCGGCAGCCTCGCCTTCTTCAGCCTCCA
CCGCCGCGAGATCCTGCCCTTCGCCCTCCCCGACCGCCTCAGCTCCGGCCGGTGCTGCGGCCAGATCGGCGGCTGGCTCG
CCATGGCCTTCGACGAGGAGCGGGCGATCGAGCTCCGCAACCTCTTCTCCGGCCAATCCGTGCCCATGCCACGGTCCCCC
GTGTTCCCGGTGGCCAAGATCGTGCTGTCCGCGCCGCCCACCTCGCTCGGCTGGGTGGCGGCCGTGCTGGGCCGCGCGGG
CACGGTGGCGCTGCTCCAGCCGGACGTGTCCGGCGGCGCCTGGATCACGATCGCCGCGGGGGGGCCGCACGGAGGGTTCC
GGGACGTGGCGCTGTGGCGGGGCCGGCTGTGCGCGCTGGGCGACGACGGCACGGTCCTGGCGTACCGGGTGGACCTCCGC
GCGCGCGTGGCGGCCGTGTCGGAGCTGCGCGGGAAGGACGCCAACTCGCTGAACCGGCTGGAGCGGCGGGCACGGTACCT
GCTGGAGTCCAGCGGGGAGCTCCTGCTGGTGAAGAAGCTGTACAGCGTGGTGAGGGACTCGGCGGACGTGGAGGTGGAGG
TGAGCCGGTTCCGGCCGGGCGAGTGCAAGTGGGAGTCGGTGACGGAGCTCCCCGGGAGGGCGGTGTTCCTGGGGTCGGTG
GCTTCGGCGGCGGCGCCGGCGACGGCGGGGGTCCGGGAGAACTGCGTCTACTTCGCGCGGCGGGACGTGGAGCTGATGGT
GCCGCACGCCATCGGCGTGTACTCGCTGGGGGACCGGGAGACGGCGGTGGTGGCCATCGCGGGCGGGCACTCCGTGGAGG
TGGAGCCCGTGTGGATCCTCCCCTCGGTCGCCTGA---------------------------------------------
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-----------------------------------
>chr3D_1_TraesCS3D01G372600
GTTACCGAATGGAGTACTGACATGCATGAACATGATATAAACAGAAATAATGCATTTTTCTAAAATAGATATTATACATA
TTTTTCAAATGGGAGGTTTATTTGTTACAATTTTTTAAATTTTAGAGATTCCCAATTTACATTTGCTGAACGCCGCACTT
TTC-----------------------------------------------------------------------------
-------------------------------------------------------------------------AAATACT
GTGAGGTTGCTTCGGTTTGCGCAGATTTTGCCTTTTATACCTTTTTCACCGGAGGCT-GGAGAGAAGTCGGGGTGACGTG
GTCGGGACAAAAAAGGATGTTAGAAATCACACATGTGTATGGAATTCAGTTTTGCTAAAGCGCATCTAAATGTGCCATAA
GTATACCTGAGCATATCTCAGGCCGGCCGGGCTTCAGGCCGGGCCAAAAAAAACCGGTGCTAAAAATCCAGGTTCAAGCC
CGGCCCAGCCCAACCATCGGGCCTACTAAATCGGGTATGAGCCCGCCCCGACTATGGCTAAAATTGTGTTTTCTGCAGGA
CTGAGCCTGGCCCGATCTGCCCGTCGTGCTCAATTTCCAGGCCCGAGCCCGGTCCGATGGCACACTCGGGCTCAGCCCGG
GATTTTCGGGTCGGGTCGGTCCGTCCGGGCCGGCTTGGCCATGGCCAGGTATAGCCATAAGTATTATGCATTTAAGTCAT
ATGCCGTTGATCTTCGCGGAGATTCGTGTGGGTACATTTCTTTATTTTTATGTTTGACTGGCTCACTTAGATCTGTAGTA
ACTTACTAAATTCGTTGATATAGAGAAAAAATAAT---TTTGCTAAAGCACATCTAATCAT-------------------
--------------------------------------------------------------------------------
----------------------------------------------ATATCATTGATATTAAGCTAAGATTCGTGCAAAC
ATTTATTTTTATTTTTATTTCTAGTTTGATTGGGTTGTTTAGATGTGCCCTGATT-------------------------
-----------------------------------CCCTGAACAGAACCAAGGAA-------------------------
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-----------------------------------------AAAAAAGGCCGGGGGGGCAATGTGCACTTCTGTCGGGAG
AAAGCAAGAAAACGGAC-AGGGTGGGAGGAAATCTCCTGCCGGACGGAAGAGGGTGCGAAAGTGTGATGGCCTCCCCGTA
CAATCCCCACCGGCGGCAGCTGGGCGGGGGGCAGTCCGCCTGGCCGGATCTCCCACCGGAGCTCCTGGAGAGCGTCCTAG
GGCGGCTCGCCCCGCTCGACCGTGTCGCCGTCCGCCTCGTCTGCTCCTCGTGGCGCTCGTGCGCGCGAGCTTCGATCTCG
GCTGACCTCCCCTTCGAGGCCCCGCGCCTCCTGCTCCGGCGCCCCGGCTCCTGCGGCAGCCTCGCCTTCTTCAGCCTCCA
CCGCCGCGAGATCCTGCCCTTCGCCCTCCCCGACCGCCTCAGCTCCGGCCGGTGCTGCGGCCAGATCGGCGGCTGGCTCG
CCATGGCCTTCGACGAGGAGCGGGCGATCGAGCTCCGCAACCTCTTCTCCGGCCAATCCGTGCCCATGCCACGGTCCCCC
GTGTTCCCGGTGGCCAAGATCGTGCTGTCCGCGCCGCCCACCTCGCTCGGCTGGGTGGCGGCCGTGCTGGGCCGCGCGGG
CACGGTGGCGCTGCTCCAGCCGGACGTGTCCGGCGGCGCCTGGATCACGATCGCCGCGGGGGGGCCGCACGGAGGGTTCC
GGGACGTGGCGCTGTGGCGGGGCCGGCTGTGCGCGCTGGGCGACGACGGCACGGTCCTGGCGTACCGGGTGGACCTCCGC
GCGCGCGTGGCGGCCGTGTCGGAGCTGCGCGGGAAGGACGCCAACTCGCTGAACCGGCTGGAGCGGCGGGCACGGTACCT
GCTGGAGTCCAGCGGGGAGCTCCTGCTGGTGAAGAAGCTGTACAGCGTGGTGAGGGACTCGGCGGACGTGGAGGTGGAGG
TGAGCCGGTTCCGGCCGGGCGAGTGCAAGTGGGAGTCGGTGACGGAGCTCCCCGGGAGGGCGGTGTTCCTGGGGTCGGTG
GCTTCGGCGGCGGCGCCGGCGACGGCGGGGGTCCGGGAGAACTGCGTCTACTTCGCGCGGCGGGACGTGGAGCTGATGGT
GCCGCACGCCATCGGCGTGTACTCGCTGGGGGACCGGGAGACGGCGGTGGTGGCCATCGCGGGCGGGCACTCCGTGGAGG
TGGAGCCCGTGTGGATCCTCCCCTCGGTCGCCTGATCTGACTGACCCCACGCACGCACCGGCGTGCAAGAACAAATAAAC
CGAGCCCATGCGCTGTAGAACGCCTTATTC-----------------GGATTGCTGTGCGTGTTGTTTTCTCTGCTTTGT
TCATGGGATTAATTGGGGATTTGGGTTTCT-------ACTAGAGGGGCAAAGACCGCTCTGTCTGAATTGCTGTGCATGT
TCTTCTCTTTGCCTTGTTCAGTTCATCAGAGGTTCAGAAAGTGCCGGTATCTGCAGTTCATGAGATTTTACCTAGGTTAT
G-------------------------------------------------------------------------------
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---------------------------------------CTAGGGCAGATGCAGTGTGGCCCGGCTTATGCGGTTTTCCT
AG------------------------------------------------------------------------------
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-----------------------------------------GGCACATGATTTCCTCGCAACCACATGGAACCAAATCCG
TTTTGGCTCCTGGTATAATAAGGCTGGTGAGCAACGCTAGGACACAGCCAGAACAGGCATCACTAACTACAATAGAAAAT
GCCATACCACAACACAG---------------------------ATATGGCAGAAGTTAGACAATACCGGTACGCAATAA
AAGC--------------------------AGACACAACAAAGC--TTTCAGTCACAAACAGCCTAAGTAACACAAT---
AACATTAACAAAATCTTTCAGTCCCAAACAAGCTGAGGCTAAGA--AGTTTCACAATAAGAACGGGCATATCACCATAAG
CAGATTAT------------------------------------------------------------------------
-----------------------------------------------GTACATCCAAGGGCAACCAGATGAATTACCTAG
TTGCCTTGGAATATTTTTCAAGGGCAACCAGATGAATTATCTAGTTGCCTTAGAATATTTTTCTTCACATTTAATTCCCT
CCAACATCATATATCAGCAGTTGAAGAAGTTGGAAAGTTTGATATATGGTCAATTACGTGGTCCAAAGCACAAAATGCCC
TTTACAACAGTAGACCAACATATATAATTAATTTTCAACTAATTTTACAGCCTTCTGTCTCTTGCTCATGTGAAGGCCAG
GTTCTCAACAGAACAATCCAAAAGGGCTCCATAGGGGGGACAGAGTATATTCAAGCCTGTATACGTTCCGCCGGTGCAAC
GGGGAAAATCTCAACATTTCAGATGTTACTACATT
>chr3B_1
GTTACAGAATGGAGTACTGACATGCATGAACATGACATAAACATAAATAATGCATTTTTCTGAAATAAATATTATACATA
GTTTTCGAGTGTGAGGTTTATTTGTTATGATTTTTT-AATTTTAGAGATTCCCAATTTACATTAGCTGAACGCCACGCTT
TTCAAATATTGTGACTACGGTGACTTCGTAAATTTCAAGATGATATACCGGCTCAGTCTATTGGAGGTGCTCATAGGGAT
AGTGTGTGCGTTCATAGGGGTGAGTGTATGCGCCTGTATATGAGCGCTTGTGTTTATACTGATGTTCAAAAAAAAATATT
GTGAAGTTGCTTCGATTTGCGCAGATTTTGTCTCCTCTACCTTTTTCACCGGAGGCTTGGAGAGAAGTC-GGGTGACGTG
GTCGGGACAAAAAAAGATGTTAGAAATCACGTATTTGCATTAAATTCAGTTTTGCTAATGCTCATCTAAATGTGTCAC--
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------------------------------------------------------CCATAAGTATTATGCATTTAAGTCCT
ATGTCGTTGATTTTCACGGAGATTCGTGTGGGTAAATTTCTTTATTTTTATGTTTGATTGGGTCATTTATATGTGCAATA
ACTTATTAAATTCGTTGATATAGAGAAAAAATAGCAGCTTTGTTAAAGTACATCTAGATGTATTAGAAATATTGCACATC
TAAGTCCTATATAATTGATTTTACGCGAAAATTCATTTGGATATTTTTTTCCTTTTCCTTTATACTTAGATGTGCAATAA
CTCAGGCACATGTAGATGTACAATAACTAAAACACATCTAGACCCCATATCATTGATTTTACGCTAAAATTCATGCAAGC
ATTTTC---TATTTTTATTTCTAATTTGATTGAGTTGTTTAGAATTTTTTAGGGGGTAGATTGAGTTGTTTAGATGTGCA
ATAATTAGAAATAACTAGGCTGCATCTAACATGTGCCCTGAACAGATTTGGTCTTGCGTTTGTACTGTGTTAAAAGAAAA
AGAAAACCGCGTGTGCTAGATAACGCCGTCGTCGACTTTGGGAACCTTGGGGTTGGGTGGCGCTTGTGGGTGGTGGGCGA
CGGCGGTGGTGCGGCCCTATCCTAGCATGGATTTACGTCCGTTGCTTGAAGATGGACTCACGTAGGTGGAGGTCGTCGGC
AGGCGTCGTGGTGGCGTCAATGGCGGGGGACCTGCCAAGGCTCGCGTAGGTGGAGGTCGTCGTTTGGCGTCGTGGTGGCG
TCGATGGCGGAGGACCTGTCAAGGTTGTCACCTCAATCTGCTCTGAAGATAGACCAGTAGAAGACGTCGGCGACGATACA
TGTGAGTGTGTCGGACTGGTTTGAGCCCCGGACCTGGCAGATGGCTCGGTCGGGGCCTCCGACTTTAGATGTTAGGCTTA
GGTGAGAGGTCTGGGTATGTGGCCCATCTTGCACCACCTTCATCATTTGGATAGGAGTTGCCGCAGATGTTGCCAACATG
GCGGATTCAGACATATTGTTGTTCTATTTTATAAGGTCCTCAAGAATAATTAATAAAATGGCCGCATGCATCTCGGCCGG
GGGTCATTCTCCTTTTTTTTTAAAAATAACGTCGTCTCCAAAAAGAGGAAATCGCGTGTGTTTTAATTTGTTCAATTTGA
TGCAACGTGCTTAATTAATAAATTCGTTTATACATAGGGGGAAAAAAGGCCGAGGGGT-AATGTGCACTTCTGTCGGGAG
AAAACAAGAAAACGGAC-AGGGTGGGAGGAAATCTCCTGCCGGACGGAAGAGGGTGTGAAAGTGTGATGGCCTCCCCGTA
CAATCCCCACCGGCGGCAGCTGGGCGGGGGGCAGTCCGCCTGGCCGGATCTCCCACCGGAGCTCCTGGAGAGCATCCTAG
GGCGGCTCGCCCCGCTCGACCGTGTCGCCGTCCGCCTCGTCTGCTCCTCGTGGCGCTCGTGCGCGCGAGCTTCGATCTTG
GCTGACCTCCCCTTCGAGGCCCCGCGCCTCCTGCTCCGGCGCCCCGGCTCCTGCGGCAGCCTCGCCTTCTTCAGCCTCCA
CCGCCGGGAGATCCTGCGTTTCGCCCTCCCCGACCGCCTCAGCTCCGGCCGGTGCTGCGGCCAGATCGGCGGCTGGCTCG
CGATGGCCTTCGACGAGGAGCGGGCGATCGAGCTCCGCAACCTCTTCTCCGGCCAATCCGTGTCCATGCCACGGTCCCCC
GTGTCCCCGGTGGCCAAGATCGTGCTGTCCGCGCCGCCCACCTCGCTCGGCTGGGTGGCCGCCGTGCTGGGCCGCGCGGG
CACGGTGGCGCTGCTCCAGCCGGACGTGTCCGGCGGCGCCTGGACCACGATCGCCGCGGGGGGGCCGCACGGAGGGTTCC
GGGACGTGGCGTTCTGGCGGGGGCGGCTGTGCGTGCTGGGCGACGACGGCACGGTCCTGGCGTACCGGGTGGACCTCCGC
GCGCGCGTGGCGGCCGTGTCGGAGCTGCGCGGGAAGGACGCCAACTCTCCGAACCGGCTGGAGCGGCGGGTGCGGTACCT
GCTGGAGTCCGGCGGGGAGCTCCTGCTGGTGAAGAAGCTGTACAGCGTGGTGCGGGACTCGGCGGACGTGGAGGTGGAGG
TGAGCCGGTTCCGGCCGGAGGGGTGCAAGTGGGAGCCGGTGACGGAGCTCCCCGGGAGGGCGGTGTTCCTGGGGTCGGTG
GCGTCGGCGGCGGCGCCGGCGACGGCGGGGGTCCGGGAGAACTGCGTCTACTTCGCGCGGCGGGACGTGGAGCTGATGGT
GCCGCACGCCATCGGCGTGTACTCGCTGGGGGACCGGGAGACGGCGGTGGTGGCCATCGCGGGCGGGCACTCCGTGGAGG
TGGAGCCCGTGTGGATCCTCCCCTCGGTCGCCTGATCCGACTGACCCCACGCACCCACCGGCGTGCAAGAATAAATAAAC
CGAGCCCACGCC------------TTATTCGGATGTTA--GAACTGTGGATTGCTGTGCGTGTTGTTTTCTCTGCTTTGT
TCATGGGATTAATTGGTGATTTGGGTTTCT-------A-------GGCAAAGACCGCTCTGTCTGAATTGCTGTGCATGT
TCTTCTCTTTGCCGTGTTCAGTTCATCAGAAGTTCAGAAAGTGCCGGTATCTGCGGTTCATGAGATTTTACCTG------
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--------------------------------GGGTTTTCTAGGGCAGATGCAGTGCGGTCCGGCTTATGCAGTACGCAG
GCAAAACAGAAATCAAACATCAGATTTTTTTAGCATGGCAAATCGAACTTCTGAGATGGCAAATTATGTTGTCGCTAGGA
TGGCAATTTCTTTTAACAAGTATGACAAATC--CGCCATGTTCAGTTTTTTGTTAGGAA----TTGTCATGCTTAAGACA
ACGTAATTTGCCATAAAAAACGTTTGACTTGCCATGCTTATAAATCTCAAGTGAGATTTTTAGCATTTCCCAGAAAGAAA
GGCGACGACAGCCGGCTCCGGCGATGGCCGTTGTCAGATGAAAGCCTCCACTGGCGCGAAGTGCTACCTTTTGCTCACGG
TCCACGCGCGCGTCGCACCAGCAGGAAAGCGATAAGCTGTGTCCGCATCCGCCGCGTGCCGATGCAGACTGCCGCTTCCA
------CTTCCACTTGCACGGGCTGAACTGAAGAAGGCAGCACGCCATCCAGAGTTTCCTTCTCGCTCGTCTCTCTCGTC
CCAAATCCGCGGTGACCACGTTCGCCTTTCAGCCGAGAAAGTTCGCACTGATA---------------------------
----GCACCATCAATCCAAATGCCAGGAAATGTAGTAGCCCGGCACATGATTTCCTCGCGACCACATGCAACCAAATCCG
TTTTGGCTCCTGGTA--ATAAGGCTGGTGTGCAACGCTAGGGCACAGCCAGAACAGGCATCACCAACTACAATAGAAAAT
GCCAGAACACAACACAGATATGACAATGCCAGAGCACAACACAGATATGACAGAAGTTAGACAATATCAGTACGCGATAA
AAGCAGACACAACACAAAAAGAATTTAAAAAGACGCAACAAATC--TTTCAGTCACAAACAGCCCAA------CAAT---
AACATTAACAAATTCTTTTAGTCCCAAACAAGTTGAGGAACAAAATAGTTTCAGAATAAGAACGGGCATACCACCATAAT
CAGATTATGTACTACTCCGCATACCACCATAAGCAGATTATGTACTACTCCCTCCGTCCCAAATGTAATGGTATCAAAAA
ACGTCTTACATTCTGGGACGGAGGGAGTAGATGAACAAGGTGTTGTAGTACATCCAAGGGCAACCAGATGAATTATCTAG
TTGCCTTT--------------------------------------------GAATATTTTTCTTCACATTTAATTCCCT
CCAACATCATATATCAGCAGTTGAAGAAGTCGGAAAGTTTGATATA--GTCAATTACGTGGTCCAAAGCACAAGATGCCC
TTTACAACAGTAGACCAACATATATAATTTTCG----ACTAATTTTACAGCCTTATGTCTCTTGCTCATGTGAAGGCCAG
GTTCTCAACAGAACAATCCAAAAGGGCTCCATAGGGGGGACAGAGTATATTCAAGCATGTATACGTTCCGCCGGTACAAC
GGGGAAAATTTCAACATTTCAAATGTTACTACATT
>chr3A_892
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--------------------------------------------------AGGAA-------------------------
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-----------------------------------------AAAAAAAGGCTGAGGGT-AATGTGCACTTCTGTCGGGAG
AAAACCATGAAACGGACAAGGGTGGGAGGAAATCTCCTGCCGGACGGAAGAGGGTGTGAAAGTGTGATGGCCTCACCGTA
CAATCCCCACCGGCGGCAGCTGGGCGGGGGGCAGTCCGCCTGGCCGGATCTCCCGCCGGAGCTCCTGGAGAGCGTCCTAG
GGCGGCTCGCCCCGCTCGACCGTGTCGCCGTCCGCCTCGTCTGCTCCTCTTGGCGCTCGTGCGCGCGAGCTTCGATCTCG
GCTGACCTCCCCTTCGAGGCCCCGCGCCTCCTGCTCCGGCGCCCCGGCTCCTGCGGCGGCCTCGCCTTCTTCAGCCTCCA
CCGCCGCGAGATCCTGCCTTTCGCCCTCCCCGACCGCCTCAGCTCCGGCCGGTGCTGCGGCCAGATCGGCGGCTGGCTCG
CCATGGCCTTCGACGAGGAGCGGGCGATCGAGCTCCGCAACCTCTTCTCCGGCCAATCCGTGCCCCTGCCGCGGTCCCCC
GTGTTCCCGGTGGCCAAGATCGTGCTGTCCGCGCCGCCCACCTCGCTTGGCTGGGTGGCCGCCGTGCTGGGCCGCGCCGG
CACGGTGGCGCTGCTCCAGCCGGACGTGTCTGGCGGCGCCTGGATCACGATCGCCGCCGGGGGGCCGCACGGCGGGTTCC
GGGACGTGGCGTTGTGGCGGGGGCGGCTGTGCGCGCTGGGCGACGACGGCACGGTCCTGGCGTACCGTGTCGACCTCCGC
GCGCGCGTGGCGGCCGTGTCGGAGCTGCGCGGGAAGGACGCCAACCCTCTGAACCGGCTGGAGCGGCGGGTGCGGTACCT
GCTGGAGTCGGACGGGGAGCTCCTGCTGGTGAAGAAGCTGTACAGCGTGGTGCGGGACTCGGCGGACGTGGAGGTGGAGG
TGAGCCGGTTCCGGCCGGAGGGGTGCAAGTGGGAGTCGGTGACGGAGCTCCCCGGGAGGGCGGTGTTCCTGGGGTCGGTG
GCGTCGGCGGCGGCGCCGGCGACGGCGGGGGTCCGGGAGAACTGCGTCTACTTCGCGCGGCGGGACGTGGAGCTGATGGT
GCCGCACGCCATCGGCGTGTACTCGCTGGGGGACCGGGAGACGGCGGTGGTGGCCATCGCGGGCGGGCACTCCGTGGAGG
TGGAGCCCGTGTGGATCCTCCCCTCGGTCGCCTGATCTGACCGACTCCACGCACCCACCGGCGTTCAAGAACAAATAAAC
CGAGCCCATGAGTTTTAGAACGCTTTATTCGGATGTTTTGGAACTGTGGATTGCTGTGCGTGTTGTTTTCTCTGCTTTGT
TCATGGGGTTAATTGGCGATTTGGGTTTCTACTAGAGA-------GGCAAAGACCGATCTGTCTGAATTGCTGTGCATGT
TCTTCTCTTTGCCTTGTTCAGTTCATCAGAAGTTCAGAAAGTGCCGGTATCTGCAGTTCATGAGATTTTACCTGTTTTTT
TTCTGAGAAAACTTTCGATCAATTCATCAATTATCAACATAGTACAAAGAACACTAGAAGTAAAATTTACATTCAGGTCC
ATAGACCACGGAGCGACGACTACAATCACTGTAGCGAGCTGAAGGCACGCCGTCGTTATCGCCCCTCCCTCGCCAAAGCC
AGGTAAACATTGTTGTACTTCCTCCTTTCCGGTTTATAAGGTTCAATTCAAAAATCTCACCAATCAAGGTAGATGATGAG
GGGTGGAATACTTTTTGTAGTTTGCAAAAGCACCCAATTAATGCTCTTGTTTTTCTCAAAAAAGTATGTTTACCAATGCA
TTAATTGTAATGCATGCATACATAAATTACATGCATTGGTCAATTTTCTCTTAATACTTGCATGCAATGATTTAATGCAC
CTTGGAATCTGAACATGTGATGGAAAACAACCAAATTGAGCCTTATAAAATAGAAAAACTAAAATTTTGATATAAGCCCT
ATAAACCGGAAAGGATGGAATAGCAGACAGTCGGATTTTTTAGGGCAGATGCATCGTGGTCCGGCTTATGCAGTACGCAG
ACAAAACAGAATCAAACATC---ATTTTTTTGGCATGGCA-ATCGAACTTTTAAGATGGCAAATTATGTTGTGGCTAGGA
TGGCAATTTCCTTTAGCAAGTATGACTAATCCTCGCCATGTTCAGTTTTTTTTTTGCTAGAAGTTGTCATGCTTACGACA
ACATAATTTGTCATAAAAAACGTTTGATTTGCCATGCTTATAAATCTGACGTGAGATTTTCAGCATTTCCCAGAAAGAAA
GGCGACGATAGCCGGCTCCGGCGATGGCCATTGTCAGATGAAAGCCTCCACTGGCGCGAAGTGCCCCCTTTGCG-CACGG
TCCACGCGCGCGTCTTACCAGCGGGAAAGCGATAAGCAGTGTCCGCATCCGCCGCGTACCGATGCAGACTGCCGCTTCCG
CTTCCGCTTCCACTTCCACGGGCTGAACTGAAGAAGGCAGCACGCCATCCGGAGTTCCCTTCTCGCGCGGCTCTCTTGTC
CCAAATCCGCGGTGACCACGTTCGCCTTTCGGCC--GAAAGTTCGCACTGATGGCACCATCAATCCCGTTCAAAAAAAAA
AATGGCACCATCAATCCAAATGCCAGGAAATGTAGTAGCCCGGCACATGATTTCCTCGCGACCACATGCAACCAAATCCG
TTTTGGCTCCTGGTA--ATAAGGTTGGTGTGCAACGCTAGGACACGGCCAGAACAGGCATCACTAACTACAATATAAAAT
GCCAGGC---------------------------CACAACACAGATATGACAGAAGTTAGACAATACCAGCACGAAACAA
AAGC--------------------------AAACAACAACAAAACTTTTCAGTCACATACAGCCCAAGTAACACACCACC
AACAACAACAAAATCTTCCAGTCCCAAACAAGTTGGGGA--AAAATAGTTTAACAATAAAAACGGGCATATCACCATAGC
AGAT----------------------------------------------------------------------------
----------------------------------------------------TCCAAGGACAACCAGATGAATTATCTAG
TTGCCTTA--------------------------------------------GAATTTTTTTCTTGACATTTAATTCCCT
CCAACATCATATATCAGCAGTTGAAGAAGTCGGAAAGTTTGATATA--GTCAATTACGTGGTCCAAAGCACGAGATGCCC
TTTACAACAGTAGACCAACATATATAATTTTTG----ACTAATTTTACAGCCTTATGTCTCTTGCTCATGTGAAGGCCAG
GTTCTCAACAGAACAATCCAAAAGGGCTCCATAGGGGGGACAGAGTATATTCAAGCCTGTATACGTTCCGCCGGTACAAC
GGGGAAAATTTCAACATTTCAGATGTTACTACATT
>SNPs
-----S-----------------------------S-------S-----------------S-----S------------
S-----S-S--S---------------SS-------S--------------------------S----------S-S---
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----S---------S---------------S--SS-S--------------------------------S----------
--------------S---------------SS--S--S--SS----------------S--S------------S--SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S-
---S-------S---S------------------S----------------------S---S---S---S--S--S-S--
-----S---------------------------SS-------S-----S-------SSSS--------------------
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---------------------------------------------------------S---S-----S----S-----S-
----SSSSS--------------S--------S----------SS-SSSSS-SSS-------------------------
----------------------------------------------SSSS------------------------------
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---------------------------------------------------------SS---------------------
---S----------------------------------------------------S-----------------------
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------------------S-------------------------------------------------------------
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-----------------------------------------------------------S--------------------
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-----------S----------S---------------------------------------------------------
-----------------------------------------------S----------------------SS--------
----------S-----------------------------------------S---------------------------
------------------SS-S----------------------------------------------------------
--S-----------------------------------------------------------------------------
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------------------------------------------------------S-------------------------
------------S-S--------S--------------------------------------------------------
----------------S---------------------SSSSSSS-----------------------------------
------------------------------S------------------------------------------SSS--S-
S-------------------------------------------------------------------------------
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-----------------------------------------------------------S-----------S--SSS-SS
-S------------------------------------------------------------------------------
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-----------------------------------------------------------S--------S-----------
---------------SS------------S--------------------------------------------------
----S--------------------------------------------S------------------S-----------
------------------------------------------S---------------------S---------------
--------------------------------S-----SSS-S------------------------------------S
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
------------------------------S---------------SS-------------------------S------
-----------------------------SS-SSSSS-----------------S-------------------------
---------------------------------------------------------------------------S----
---------S-------------------------
>forward_682
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----------------------GTCGTGCTCAATTTCCAGGC--------------------------------------
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>reverse_4002
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-GGGCACATGATTTCCTCGCA-----------------------------------------------------------
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-----------------------------------
