>input_sequence_61028
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----------------------------------------------------------ATGGCGGCCCAGGTACGCAGAC
GTTGGCGCGGGTTCTTTCTTGGGTTAATTCATGCGATTGCTCGCGCCTGATCCTTGGATTGTATGTATGTTCGGCCGATT
CTCAACAGAAGGTGGTGCTCAGGGTCCCGACCATGACCGACGACAAGGCCAAGCAGAAGGCCATCGAAGCGGTCGCGGAT
ATCTACGGTAACAGTTTGCACCTCCCACCTCTGCTGCTTGTTTTGTTTGCCCGTTGGACTTGGAAGTTTTGGTCTGGTAT
TTCC-ATCGAAGAAGACAGTATGCATGATAGTTGCAGAAGCTGGCATAGCAATTCTTGCATCATTTGTTTTCCACTCAAT
CTGTGGTTCATGTATCTGAAAGCATTTGCACAGATTTTAGGTGGAAGCTTGAGAGCAGAAACCATGTTAGGTGGAATTAT
TCTCGCGCACACATTGACATAAAGAT-GGTGACAGTTCAATAGAGCATCGCATATTTCAAATTGTTGCCATCGGCTTTAG
GTGTAAGCATGAGAGGAAAAATCATGTTAGGTGGAATCATCTTGTCATGCATA-TATTAACATGAAACACCATTCAACAG
AGCCACATCGTATAGCTACGCATGCGAAATGTTATTTAACTTACAGTCTTACACTATCATA-TTCATTGCTAATGCCATG
AGGAAAAGTTTGTTTTCGGTCATATAGCAGTTATAATCTTCAAAGAGGTATTTTTCCTTTCTAGTTCTATGAGCACCATA
TCTTAACTCATATAAGGAAAGATGAATGAATATACTGATGGGAAGGGCTGTGACGTATTAACTAATAGTACTATTATACC
AGCAGGAAAATGATGCAATACACACCTCGTTTTGTGCGCAGGCATTGATTCCATAGTTGCGGATCTGAAGGACAATAAGA
TGATCATCATAGGCGAGATGGACACTGTGGCAATCGCAAAGAAATTAAAGAAGGTTGGGAAGATTGACATTGTGTCCGTT
GGACCTGCAAAGGAAGAAAAGAAAGAAGAGAAGAAAGAAGAAAAGAAAGAGGAGAAAAAAGAGGAAAAGAAAGAAGAGAA
GAAAGAGGAGAAGAAAGAAGAGAAAAAATGA-------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr1D_1_TraesCS1D01G163600
AACTAGGAGGTAGAAGACTGGCCAGTCATCAAACCCAACCAACTTGTGGCACTGGACCGGGCGGCCCAAAGCAGAACAAG
CAGGTGCCCCATTTGTCCTCGGCCGAGCAGCCGCACAGTTCCGTTCCTAGTAGACCTGAGCAGTTTTTGCTCAAAAAAGA
AAAAAGAGTAGACGTGAACAGTTGAGCCAGCGCCAAACAAAGAGGCGGGCAGCAGTTAGGACAGTTGGGCGCACAATCTT
GCTAGACATAGTTTCAATTTAAATTCTATTTTTATTTGGGATGATGATCCTCCCAGCTTTTTAATTTCGGACACTGTGGA
TGATGCAACTTTGATTTGAGTTTAATAAAGTGCGCCAAGTGGTTTAAAAAAAAAGGTGGGCAGCAGGTATGACAGCATCG
AGTTGCTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------AAAAAGAAAGCCAAATCGAGCGCCTGAGGTTTCCCCGTCGCCTTCACTCGTCAGTCACTCAAAGGA
ATCCAGCAAAGCAACAGGTCGCCCGGCGTCCGCAACGCCACAACCCGGCAGCACCGGCGCCTCCGGCCACGACCGACCCA
ATCCATCCCTCCTCTTCCGGGAATAAAATCCCGTCTCCATGCGCACGGTGTGGGTGGGGCGGCCGCCGGTCGGTTGGCA-
-----CGCACTCGCCCGTCAGCTCACCGACCCTGCCGCCATCCCGCACATACGCACACAGCAGCTGATGCGGGCAGATTC
AGACGTCACAGGCG--ATACAGGGGAAAGTAAACACCACCGCGTACCTCTTCCGCAACGCAGACACCGGCAAGTCCGACT
CATCGCTCAACGTCAGTGCTAACCTACCGTTCAGCAAGAGCACGCACACTTGCACCTTTATGTAAAGCAAAACCCGACGC
CGTCACCAGCTTTGGTCTCTTCTCTTCCCATTGCTCAC-ATACCTCGGC--AGAG--TATTCTCAACTCCCTGCTCAGCC
TTCCCTTCCCTCTCCTCTCCTTCCTCCGCCCACTCCACTCGGAGCTCCAGAAGCTTGGATGGCGGCCCAGGTACGCAGAC
GTTGGCGCGGGTTCTTTCTTGGGTTAATTCATGCGATTGCTCGCGCCTGATCCTTGGATTGTATGTATGTTCGGCCGATT
CTCAACAGAAGGTGGTGCTCAGGGTCCCGACCATGACCGACGACAAGGCCAAGCAGAAGGCCATCGAAGCGGTCGCGGAT
ATCTACGGTAACAGTTTGCACCTCCCACCTCTGCTGCTTGTTTTGTTTGCCCGTTGGACTTGGAAGTTTTGGTCTGGTAT
TTCC-ATCGAAGAAGACAGTATGCATGATAGTTGCAGAAGCTGGCATAGCAATTCTTGCATCATTTGTTTTCCACTCAAT
CTGTGGTTCATGTATCTGAAAGCATTTGCACAGATTTTAGGTGGAAGCTTGAGAGCAGAAACCATGTTAGGTGGAATTAT
TCTCGCGCACACATTGACATAAAGAT-GGTGACAGTTCAATAGAGCATCGCATATTTCAAATTGTTGCCATCGGCTTTAG
GTGTAAGCATGAGAGGAAAAATCATGTTAGGTGGAATCATCTTGTCATGCATA-TATTAACATGAAACACCATTCAACAG
AGCCACATCGTATAGCTACGCATGCGAAATGTTATTTAACTTACAGTCTTACACTATCATA-TTCATTGCTAATGCCATG
AGGAAAAGTTTGTTTTCGGTCATATAGCAGTTATAATCTTCAAAGAGGTATTTTTCCTTTCTAGTTCTATGAGCACCATA
TCTTAACTCATATAAGGAAAGATGAATGAATATACTGATGGGAAGGGCTGTGACGTATTAACTAATAGTACTATTATACC
AGCAGGAAAATGATGCAATACACACCTCGTTTTGTGCGCAGGCATTGATTCCATAGTTGCGGATCTGAAGGACAATAAGA
TGATCATCATAGGCGAGATGGACACTGTGGCAATCGCAAAGAAATTAAAGAAGGTTGGGAAGATTGACATTGTGTCCGTT
GGACCTGCAAAGGAAGAAAAGAAAGAAGAGAAGAAAGAAGAAAAGAAAGAGGAGAAAAAAGAGGAAAAGAAAGAAGAGAA
GAAAGAGGAGAAGAAAGAAGAGAAAAAATGATAAAGCATACCACACCATCCCATGGCCTTTCTCCTGTGTGCACTTGTAA
TAGCTTTGTCTACGGATCTATGTTTCTAAGAGATATGACTTTGTACCATTACATCTAAA-----GTTCATATTAGTGATA
TTTCTTTACAGAAGATAATACACTTTGTTCTTCCATTTCTTAGCATCTATACACGCCTACCTCATCAAATTATCTTCAGT
TCTTCATGCATGCCTAAAATGCTCAGCTTTGGGATACCAACATCAAATTGGCAACTCATAAATAAAACCTATGAATATTG
TGATGAATCATTGAAGGCATGCACCTACTACCAGATTAATCTTGGAATATTATTTTGTTATAAGAAACAGAGGAACAGAC
GTACAGAAGGTTGACATTGACTAGAACGATAATATTAAAAATTAAACTACCATGCTGCACCTATTGTTAACCCTTAAAAA
CATGATATAATAGGTTAAAAGAGAACCACTAAGCAAAACAATGC-TTAGGCTTTAAGGTCTTGGTGCTAACAGATAATGC
ACAATTCATCTAAGTTTTTTTCTGATTTGTGACATGTAATCCACTAACCCTATTACTAGGGTTGGCAGAAACGAAACTAG
GGAGTTTTGAGTGCTTTCTGTGCTAGCCAATCGAAGGACAAATAAATTTGAAGGCATGTTACTTACCATTTAACATTTAT
ATG----GTCGTCATTGAGTAAAACCATATGTTCCATCTTGTACTGTGGATGAATATCTGGCACTACAAACAATATTGAT
GACTAGTGCCCACCATCTGGTTCAGCACTAAAATTAGGAGCAAAACTACTGTGAATAGAGCTCAACAAAAGGAAAACTTT
TTG--TGTGTGTAGGAATTAGGACTATTGAAGCAGTGTTAGTTCATTACTCACT--------------------------
--------------------------------------------------------------------------------
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------------------------------------------------AGTCATGACTAGTGCCCACCATCCTGTCCAAT
TTTATTCTTGCATAAAACAGTTATGGTATACAACATACATTTATGCACTTCGCT-AATAAGTATCCCCACACAAAATG
>chr1A_6
GGAGT------AGAAGACTGGCCAGTCACCGAACCCAACCAACTTGTGGCACTGGACCGGGCGGCCCAAAGCAGAACAAG
CAGGTGCCCCATTCGTCCTCGGCCGAGCAGCCGCACAGTTTCGTTCCCAGTAGACGTGAACAGTTTTTGCTAAAAAAAAG
----AGAGTAGACGTGAACAGTCGAGCCACCGCGAAAC------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAAGAGGTGGGCAGCAGGTATGCCAACATCG
AGTTGCTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------AAAAAAAAAGCCAAATCGAGCGCCTGAGGTTTCCCCGTCGCCTTCACTCGTCAGTCACTCAAAGGA
ATCCAGCAAAGCAACAGGTCACCCGGCGTCTGCAGCGCCACAACTCGGCAGCAGCGGCGCCTCCGGCCACGACCGACCCA
ATCCATCCCTCCTCTTCCGGGAATAAAATCCCGTCTCCATGCGCAAGGTGTGGGTGGGGCGGCCGCCGGTCGGTTGGCAG
TGGCACGCACTCGCCCGTCAGCTCACCGACCCTGCCGCCATCCCGCACATACGCACACAGCAGCTGATGCGGGCAGACTC
AGACGTCACAGACGATATACAAGGGAAAGTAAACACATCCGCGTACCTCTTCCGCAACGCAGACACCCGCAAGTCCGACT
CATCGCTCAACGTCAGTGCCAACCTGCCGTTCAGCAAGAGCACGCACGCTTGCACCTTTATGTAAAGCAAAACCCGACGC
CGTCACCAGCTTTGGTCTCTTCTCTTCCCATTGCTCAAAATACCTCGGCAGAGAG--TATTCTCAACTCCCGGCTCAGCC
TTCCCTTCCCTTCCCTCTCCTGCCTCCGCCCACTCCACTCAGTGCTCCAGAAGCTCGGATGGCGGCCCAGGTACGCAGAC
GTTGGCTCGGGTTCTTTCTTGGGTTAATTCATGCGATTGCTCGCGCCTGATCCTCGGATTGTATGTATGTTCGGCCGATT
CTCAACAGAAGGTGGTGCTCAGGGTCCCGACCATGACCGACGACAAGGCCAAGCAGAAGGCCATCGAAGCGGTCGCGGAT
ATCTACGGTAACAGTCG---CCTCCCACCTCTGCTGCTTGTTTGG-----CCGT-GGACTTGGAAGTTTCGGTCTGGTAT
TTCAAATCGAAGAGGACGATACAATCTGTAGTTGCAGAAGCTGGCATAGTAATTCTTGCATCATCCGTTTGCCATTCAAT
CTGTGGCTCATGTATCTGAAAGGATTTGCACAGATTTTAGGTGGAAGCTTTAGGGCTGAAATCATGTTAGGTGGGATTAT
TCTCACACACGCATTGACATAAAGAT-GGTGACAGTTCAATAGAGCATCGCATATCTCAAATCGCTGCCATCGGCTTTAG
GTGGAAGCTTGAGAGGAGAAATTATGTTTGGTGGAATCATCTTGTCATGCATA-TATTAACATGAAGCACCATTCAACAG
AGCCACATCATA-------GCATGCGAAATGTTATTTAACTTACAGTCTTACACTATCAATGTTCATTGCTAATGCCATG
AGGAAAAGTTTGTTTTCGGTCATATAGCAGTTATAATCTTCAAAGAGGTATTTTTCCTTTCTAGTTCTATGACCACCATA
TCTTAACTCATATAAGGAAAGATGAACGAATATACTGATGGGAAGGGCTGTGACGTATTAACTAATAGTACTATTATACC
AGCAAGAAAATGATGCAATACACACCTCGTTTTGTGCGCAGGCATTGATTCCATAGTTGCGGATCTGAAGGACAATAAGA
TGATCATCATAGGCGAGATGGACACTGTGGCAATCGCAAAGAAATTAAAGAAGGTTGGGAAGATTGACATTGTGTCCGTT
GGACCTGCAAAGGAAGAAAAGAAAGAAGAGAAGAAAGAAGAAAAGAAAGAGGAGAAAAAAGAGGAAAAGAAAGAAGAGAA
GAAAGAGGAGAAGAAAGAGGAGAAAAAATGATAAAGCATACCACACCATCCCATGGCCTTTCTCCTCTGTGCACTTCTAA
TAGCTTTGTCTACGGATCTATGTTTCTAAGAGATATGACTTTGTACCATTATATCTAAA-----GTACATATTAGTGATA
TTTCTTTACAGAAGAGAATACACTTTGTTCTTCCATTTCTTAGCATCTATACACGCCTACCTCATCGAATTATCTTCAGT
TCTTCATCCATGCCTAAAATGCTCGGCTTTGGGATACCAACATCAAATTGGCAACTCATAAATAAAACCTATGAATATTG
TGATGAATCATTGAAGGCATGCACCTACTGCCAGATTAATTTTGGAATATTATTTTATTATAAGAAACAGAGGACCAGAC
GTACAGAAGGTTGACATTGACTAGAACTATAATATTAAAAATTAAACTACCATGTTGCACCTATTGTTAACCCTTAAAAA
CATGATATAATAGGCTAAAAGAGAACCACTAAGCAAAACAATGC-TTAGGCTTTAAGGTCTTGGTGCTAACAGATAATGC
ACAATTCATCTAAGTTTTTTTCTGATTTGTGGCATGTAATCCACTAACCCTATTACTAGGGTTGGCAGAAATGAAACTAG
GGAGTTTTGAGTGCTTTCTGTGCTAGCCAATCGAAGGACAAATAAATTTGAGGGCATCTTACTTACCATTTAACATTTAT
ATGTTCTGTCGTCATTGAGTAAAACCATATGCTCCATCTTGTACTGTGGATGAATATCTGACACTACAAACAATATTGAT
GACTAGTGCCCACCATCTGGTTCAGCACTAAAATTAGGAGCAAAACTACTGTGAATACAGCTCAACAAAAGGAAAACGTT
TTTTTTGTGTGTAGGAATTAGGACTATTGAAGCAGTGCTAGTTCATTACTCACA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGTCATGACTAGTGCCCACCATCCTGTCCAAC
TTTATTCTTGCATAAAACAGTTATGGTATACAACATACATTTGTGCACTTCGCTAAATAAGTATCCCCACACAAAATG
>chr1B_366
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAC------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAAGAGGTGGGCAGCAGGTATGACAGCATCG
AGTTGCTCTAAAAAAAAGAAGGGAAACGTTTACAACCGGGGCACCGGCCGAAACTTCGGCCGGTCCACTCGCTTACCCCG
CGCGTAGCGCTAAAGCAGGAGAGACACGTCATCCCGCGAGGGTCCGCACACCGCTCTGCTTCCTTATCCTTTCCAGCGCG
GCTGCTGTCCACACACACCACATTTCCTTCCTTTCTTGCCTGGATTTCCCACGCCGCTGCTTCTGCCTATCTATTTTTTC
TCAGACGCCATTGCTGTAGAGTTGCTGCACGGGGCGCCCTCACCCACGAAGCGTGGCGCCGCGGGAGTTGTTGCTGCTGC
AAGGGATGCCATCGCCATGGCCGAACGCGACGGGGCTGAGCACCGGCGCTATTACGACAGGGGGCCATGGTCTGCGAGCT
CACAGGCCAGGGCGGCCATGGCTACGAGCTCGAGGCATGTTACTACAACTCCAGATTTGCTTCCATGTTTGCTTTTGCTG
GAACCAGTGTACTAATTTGTTACCATCGTCTTTGTTTTTTGCTGGAACTAACCAAATTTTGCTGCCATGTCTTTTTGCTG
GAATCATTTTTGTACCACTTTTTTGCTACAACAGTTTTGGTTTTTTGCTACTACCGGCACTGTCGTTTGTTACATCCTTT
TTCATGAGATTGTCGAGACCCTGTGCTTGTGTGTTTTGCTACAACCTTGTACTGTTTTTGCTACAACCTTCTACATTTTT
TGCTACTACTGGAGAAGCCCCTAGCTGGACCACAAGTTATTTTTGCTACAACCGTTTTGTGGTTTGCTGCAACCAATGTC
AATTTTTGCTACCACCGACTTCTTTGATTTTTCTGGAACCAGCGCTCGATTTTTTATTTTTGCTACCACTAGCGTTTCGA
TTTGCTGGAACAAGCTTCAATTTTTGCTACCATCAGGTTTTTGGTTTGTTGGAGTGTCGTCAATTTTTTCTAATTTTGCT
ACCAACGTTTTATTATTTGCTGGAACCGTCAAGAATTTTTGCTACGGCCGGTGGAATTTTTTGCTGCGACTGGCAAATTA
AGGATGAGGAACAACACGAGCTCTACAACGGGTGCTGCGGCCGGTGACGTGAGGCTCCGCGAGCCGCGGGGGGCCTCGCC
GGAGATGCGCCGCGGGGGCGTTGCTGGAGCTGGGCCTCGCCGGAGATGCGCCGCGGGGCTGGAGCTGGGCCTCACCGGAG
ATGTGCCGCGGGGGCCTTTGCTGGAGCTGCGCGGTGCTGCGAGCCGCGGGGGATCTCACCGGAGATGCGCCGTGCTGCGA
GCCGCAGGGGATCTCGCCGGAGATGCGCCACGGGGCCCGAGGAAGAAGAAGCTGGGGCGATTTTTTATTTTATTTTTTTG
GCTCCAGATCCAACCGCCGCGCGGCTCGCATCGAGCGGCTATGGCTGGACCGGCCGAAAGTTTCGGCCGGTGCGCCGGCG
TCTAGTGGTGCCCTAAAAAGAAGGCCAAATCGAGCGCCTGAGGTATCCCCGTCGCCTTCACTCGTCAGTCACTCAAAGGA
ATCCAGCAAAGCAACAGGTCACCCGGCGTCCGCAGCGCCACAACCCGGCAGCACCGGCGCCTCCGGCCACGACCGACCCA
ATCCATCCCTCCTCTTCCGGGAATAAAATCTGGTCTCCATGCGCACGGCGTGGGTGGGGCGGCCGCCGGTCGGTTGGCA-
-----CGCACTCG-CCGTCAGCTGGCCGACCCTGCCGCCATCTCGCACATACGCACACAGCAGCTGATGCGGGCAGACTC
AGACGTCACAGACG--ATACAAGGGAAAGTAAACACATCCGCGTACCTCTTCCGCAACGCAGAAACCGGCCT----GACT
CATCGCTCAACGTCAGTGCCAACCTAGCGTTCAGCAAGAGCACGCACACTTGCACCTTTATGTAAAGCAAAACCCGACGC
CGTCACCAGCTTTGGTTTCTTCTCTTCCCATTGCTCAC-ATACCTCGGC--AGAGAGTATTCTCACCTCCCAGCTCAGCC
TTCACTTCCCTCTCCTCTCCTTCCTCCACCCACTCCACTCAGAGCTCCAGAAGCTCCGATGGCGGCCCAGGTACGCAGAC
GTTGGCTCAGGCTCTTTCTTCGGTTAATACCTTCGATTGCTCGCGCCTGAACCTCGGATTGTATGTATGTTCG-------
-----CAGAAGGTGGTGCTGAGGGTCCCGACCATGACCGACGACAAGGTGAAGCAGAAGGCTATTGAAGCGGTCGCGGAC
ATCTACGGTAATACTCTGCACCTCCCACCTCTGCTGCTTGTTTGG-----CCGTTGGACTTGGAAGTTTTGATCTGGTAT
CTCC-ATCGAAGAAGACAGTAGGCCTGATAGTTGCAGAAGCTGGCATAGAAATTCTTGCATCATTTGTTTTCCATTCAAT
CTGTGGTTCATGTATCTGAAAGCATTTGAACAGATTTTAGGTGGATGCTTGAGAGCAGAAACCATGTTAGGTGGAATTAT
TCTCTTGCACACATTGACATAAAGATGGGTGACAGTTCAATAGTGCATCGCATATCTCAAATCGTTGCCATCGGCTTTAG
GAGGAAGCTTGAGAGGAAAAATCGTGTTAGGTGGAATCGTCTTGTCATGCATAGTATTAACATGAAGCACCATTCAACAG
AGCCACATCGTATAGCTACGCATGTGAAATGTTATTTAACTTACAGTCTTACACTATCAATGTTCATTGCTAATGCCATG
AGGAAAAGTTTGTTTTCGGCCATATAGCAGTTATAATCTTCAAAGAGGTATTTTTCCTTTCTAGTTCTATGAGCACCATA
TATTAACTCATATAAGGAAAGATGAATGAATATACTGATGGGAAGAGCTGTGACGTATTAACTAATAGTAATATTATACC
AGCAAGAAAATGATGCAATACACACCTCATTTTGTGCGCAGGTATTGATTCCATAGTTGCAGATCTGAAGGACAATAAGA
TGATCATCATAGGCGAGATGGACACTGTGGCAATCGCAAAGAAATTAAAGAAGGTTGGGAAGATTGACATTGTGTCTGTT
GGACCTGCAAAAGAAGAAAAGAAAGAAGAGAAGAAAGAAGAAAAGAAAGAGGAGAAGAAAGAGGAAAAGAAAGAAGAGAA
GAAAGAGGAGAAGAAAGAAGAGAAGAAATGATTCAGCATACAACACCATCCCATGGCCTTTCTCCTGTGTGCACTTGCAA
TAGCTTTGACTACAGATTGATGTTTCTAAGAGATATGACTTTGTACCATTTATATATAAAGTACGTACATATTAGTGACG
TTTCTTTACAGAAAAGAATACACTTTGTTCTTCCATTTCTTAGCATCTATAC--GCCTACCTCATCGAATTATCTTCACT
TCCTCATCCATGCCCAGCG---------TTGGGACACCAACACCAAATTGGCAACTCATAAATAAAACCTATGGATATTA
TGCTGAATCATTGAAGGCATGCACCTAC---CAGATTAATTTTGAAA----ATTTTATTATAAGAAACAGAGGACCAGAC
CTACAGAAGGTTGACATTGACTAGAACG---ATATTAAAAATTAAACTGCCATGCTGCAGCTATTGTTGACCCTTAAAAA
CATGATATAATAAGCTAAAAGAGAACCACTGAGCAAAATAAAAGGTTAGCCTTTAAGGTCTTGGTGCTAACAGATAATGC
ACAATCCATCTACAGTTTTTTCTGATTTGTGACATGTAATCCACTAACCCTA-TACTAGGGTTGGCAGAAATGAAACTAG
GGAGTTTTGAGTGCTTTCTGTGCTAGCCAATCGAAGGACAAATAAATTTGAAGGCATTTTACTTACCATTTAACATTTAT
ATGTTCTGTCGTCATTGAGTAAAACCATATGCTCCATCTTGTACCGTGGATGAATAGCTGACACTACAAACAATATTGAT
GACTAGTGCCCACCATCTGGTTCAGCACTAAAATTAGGAGCAAAACTACTGTGAATAGAGCTCAACAAAAGGAAAAC--T
TTTTTTGTGTGTAGGAATTAGGACTATTGAAGCAGTGTTAGTTCACTACTCACTAGTCATGACTTTTTTTTTGAACAAGC
AAAGGCACCTAAGTGCCAAATTCATTCAGCTCATAGAGAAAGTACAAAGAGAATTACATAGATCTGCTGAAGATATAGAG
AGGAGTAGCAGTATCTAGAAAAGAGAGCTGAAGAAAGACCCTATATGAGGCAAAGTGGAAATGACCACTACACCATGATC
AACATGGTCAGAACTAGCAGAGGAACACTCTGAATCTGAAACTAGGAACAGCTGTTGCCTTTTGCTTCAATACTGATCGG
CCATCTTTCTTGAAGCAAGCATGTCAAGGTCCTGTAGAAACAGCAAAATACATCTGCAACCAAGATGAAACTCCAGCTTC
GCGTTATAGCATCAAACTCCAGAGATTTGCAAACGAATAAAAAACCAAGCACAACACATAGTACAGAGAGAAGGCAGAGC
TCAAGAAGTAACAAAGAACATGCCCAGGCTTCCATCTATAACTGAGATAAAAACTTGCCACACCAAAACCTACAGGGAGA
AAATTAATAACAGTGAACTGTATGAATTCTAAAGCCCTGAATCTGAAAATTTTCAAGAAGAGGCAGTATTGGGCAAAGAC
CATGAGTGTGTCTTGCAGCAAAACAAGAGAGCCGAGTGTCGCCAATAGCACGGAAAACTTGTTGAGCAAGATTATGAGCA
ATACCATTGATCTCCCTAGAAATGTGAAACACCTTTGGCTGCAGCTGATAAGTAGTCTTAAAAAAACTAGCCAAAGATTT
CCTGATACTCCATGGAGTTTCAGAAGTGGAGACATTACCTAGAGCAGCAGGCCCCGCTAAAACCAAGCAGTCCGTCAGAA
AAGTAGGCCGAGCAATGTTGAGTTGAGATGCAAAATAAGCAGCAAAATTTAGTGCAAGAGCCTCCGCTTGCAGAGGAGTA
GAAGTTGGAGGAGCTGAAGCTTGCACTTGCACATTGATCTCTCCTCGATTAGAGGGTAAGGAGCTGAAGCTTGCACTTGC
ACATTGATCTCTCCTCGATTAGAGGGTAAGGAAATAAAGACCCCCACACCTGTGCCAACCTGTCCTTGCAACAAACCTGG
AATTTTCTTGGTCCTAAAAGCTGCATCCGAATAGATTTTAGCCCCATCAACCAACAAATCAGACCTAAGGGTTCTGCCAG
GCAAAGGAATTTGATTAGAAGAGAACTGAGTTGGAGTTGGAGCCTGATTCAAGAGAAGGGCATTGTCATACACATTAGAG
GTTAACGCAAGAGCAGCAATGTGAACTTGATGAGGAAGAGATTTCGCCCTATCAAAGAGAAAATCATTCCTTGCTTTCCA
GAGACACCAAAGAAATGTAAAAATGTTAGAAAGAGAACCATATGGATGCCTCATGCAAAGAAAATCAAGAAGAACAGAAT
GCAAGGTGGAATGCCCCTGGACTAAAGCATCCGAACGAACAAACCAAGGAGAGGAAAACCAAGCCGCACGAGAAAAAGAG
CACATGAAAAACCGATGGACCTCATCCTCTTGTTGACCACATCGGCAACAATTTTTTGAAATGTGAATGGAAAATCTACT
GGCCCTCAACCCTGTATGAAGAGCCCTCCTAAGCAGTCTCCACGCAAAAGTCATGACTAGTGCCCACCATCCTGTCCAAT
TTTATTCTTGCATAAAACAGTTATGGTATACAACATACATTTGTGCACTTCGCT-AATAAGTATCCCCACACAAAATG
>SNPs
SSSSSSSSSSS-----------------S-S-------------------------------------------------
-------------S--------------------------S------S-------S---S-----------S------SS
SSSS------------------S------S---S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------S---------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------S---------S--------------SS------------------------------------------
-------------------S------------------------------------------------------------
-----------------------------------------------------------------------S--------
----------------------------------------S--------------S------------------------
------S-----------------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------S---------------------------S-SSSSS------------------------------
---------------------S--S------------------------S------------------------S-----
--------------------------------------------------------------------------------
----S--------------------------------------------------S------S-----------------
---S----S---------------------------------------------------------S-------------
-----------------------------------------------------------SS-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------------S-------------
---------------S--------------------------------------------------S-------------
-------S----------------S-------------------------------------------------------
-----------------------------S----------S---------------S-----------------S-----
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------------------S--------
---------------------------------------------------------S----------------------
-------------------------------S----------------------------S-------------------
-----------------------------------------------------------------------------S--
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----------------------------------
>forward_226
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GGGCAGCAGTTAGGACAGTT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------TTTGCCCGTTGGACTTGGAA---------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_230
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AGCAGTTAGGACAGTTGGGC----------
--------------------------------------------------------------------------------
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>reverse_2687
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTGCCCGTTGGACTTGGAAG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_326
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCGGACACTGTGGA
TGATGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2689
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCCCGTTGGACTTGGAAGTT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGGACACTGTGGA
TGATGCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACACCATTCAACAG
AGCCACA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AGACGTCACAGGCGATACAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_3768
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GCATGCCTAAAATGCTCAGCT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
