>input_sequence_61014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGAC
AAGGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGG
GAACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCCCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGG
TAACCAACTAGGCCGTCCA---------------------------------------------------GCGAT-GACC
GTCGAGGTTGGCCATGGCGGCCGCCCGTGCATGCATGGTGATATGCATGATCTAATAACAACTCTTCTTTGGGTTTGGGG
GGAATGCAGATGGGCCGCGATCGCGTCTTACCTGCCACAGAGAACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCG---CCGCCCTCCAGCTCCGCCGAG
ACAGCCGCCAACCTCCCCGCTGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAG
CTCCACGGTCGACCACGGCTGCTAC---------AGCAACCCGGAGATCACCCAGCA---TACGACGATCACCATGCGCC
GCTCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTC
GGCGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTC
CTTCGACCGCATATCCGGCACCGGCGCCGAGCTGGCTTTCGTCCCCGGCGTT---CAGCAGCTGCAGCAGCAGCCGGTGT
TAATGGGGGGCATCAGCTATGATGACGAGGCCACCAGACAGCAGCAGCAGCAGCTCCATCATCAGCTGCCACTGTGTTCG
ATCGAGAAGTGGCTTCTCGACGAGGCGGCAGAGCAGGTCGCTGACCTCATGGAGCTCTCCGACGGTGGCTGCTCCTCCCT
GCCATTGCTGTACTAG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G142500
TGTGTTGTGACCACACTCAAGAATATATCTACCTTATATGAAGGCAAACTGGTTGTTAGATACAA---------------
---ATCTATTGGTCAGAACTTCAGTAAAAATCTTT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTAACGAAAAAGGGTTTTCCCCCGCTTTGTATTCCAAAGC--------------------------
-----------AACCAACCGACACATCCAAGGATAGGTGCTGGGGCGGAAGCAGCACAGGCACACCCAAAAGAAACGAAA
GAGAAACAACAAGAGAAAAGAATGCCGACAACGGCGGATCGACGGAAACGAAGAAGCTTCACGACCACTGCGCCCACCGA
AGATCTCCCACCAAGCTCCAAGGCTCCGAAGCACCGGCACCAATCAGCACCTCCAAGAAGGACCGCGACGAAGATGACGC
TGCTGCCAAGGGTTTCCCCCGGTACACGACGAGGCGAGAGGAAAGGTCGCAATTTTATTAAAAGGCTAATAGGCCTAAAT
TTCTT----------------------------------CATGGTTGTTGCAGCGGGTTCCTTGAGGATAGGTAACGAAA
TTTAGGTAGTACACTTTACCGTTTTGTTTCCTACACATAGTAGAGTACCACGGAGTGAAATGCCTTGACTAGTGATGGTA
AGCTTGACGAGTCACTGGTGTGGTGGCTTGCATGCACAAGTCTAGCCAAGGATCCAATTTAAATCCCACACAGTAGCGCT
AGGGTGCAGCAGTACGTACACCTCTAGTTCGTCCTTCCTTTAAGGCGTGGTGGGGCGGGGTCGGTTTCTATGATTCATGT
GATGTCGTTGACAGAAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCG
TCAGAGAGCTATAGAGTTAGACGATGGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCGTCTCCCTCCTATATATAC
----------GGAGAGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGGCACGAGTGAGAAACA
CGATCGAGCTGCCAAAAGG------------A------GAAGGTGATCGGTCGATCATGGGGAGGCCGCCGTGCTGCGAC
AAGGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGG
GAACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCCCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGG
TAACCAACTAGGCCGTCCA---------------------------------------------------GCGAT-GACC
GTCGAGGTTGGCCATGGCGGCCGCCCGTGCATGCATGGTGATATGCATGATCTAATAACAACTCTTCTTTGGGTTTGGGG
GGAATGCAGATGGGCCGCGATCGCGTCTTACCTGCCACAGAGAACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCG---CCGCCCTCCAGCTCCGCCGAG
ACAGCCGCCAACCTCCCCGCTGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAG
CTCCACGGTCGACCACGGCTGCTAC---------AGCAACCCGGAGATCACCCAGCA---TACGACGATCACCATGCGCC
GCTCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTC
GGCGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTC
CTTCGACCGCATATCCGGCACCGGCGCCGAGCTGGCTTTCGTCCCCGGCGTT---CAGCAGCTGCAGCAGCAGCCGGTGT
TAATGGGGGGCATCAGCTATGATGACGAGGCCACCAGACAGCAGCAGCAGCAGCTCCATCATCAGCTGCCACTGTGTTCG
ATCGAGAAGTGGCTTCTCGACGAGGCGGCAGAGCAGGTCGCTGACCTCATGGAGCTCTCCGACGGTGGCTGCTCCTCCCT
GCCATTGCTGTACTAGCCAGT---ACTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCAATGTCACTTTCCAGATAC
ATAGTTAATCGTTTCTACAGTCAATTACATGCATACACATCCATATATGTATAATAGATAAGCTAAGTAATTTCTGTTAA
TTACATGTTCTAGCT-AGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAAAGAAGTTAATTAGAGAGACGTTTACTAATGGTGCATATTTACACT-GGGATGGGATGATGAGAAGAA
GGCCAGGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAATAACGGGCGCGACGTGATGTATGATCTGATCTGCAAGC
ATGATGCGACTAAGGGTTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGGGAATTATTTTTGTTTCTGGGTTATAA
GTACAAGCTAGCTGAAGTGTTTCAGCTTAGCTTACCCGGTGTTAAATTGTACGGAGTATGAACATAAGTTAGTGAAGCCT
TCTGTTTTTGTCTTGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGGTCATGTACGGTGTGACATGAAT
GCTACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGATCACATTCACTGCAAAAGAAAA-------TGATCACACTCG
CTGCAAAAGAAGAAAA-----CAACTCCCAGATTATAACAAAAAAATAATACTTCCTCCGTCCCACAGTATAA
>chr5B_1
TGTATTGTGACCACACTCAAGAATATATCTGCCTTTTATGAAGGTAGACTGGTTGTTAGATATGAAACTATTTAAGAATA
TGGATCTATTGGTCAGAACTTCAGTAAAAATCTTCAAGACACAAATTTTATCTATACCTACTATTAAAGGGAGGTGATAT
TCTTGATTTCGTCCTATTTTGTTTGGTCCCGCTTTAATTAATTTCATGTATGTGATTTGGTTTCGTTACTTGCCACCCGT
GTTGACCCAACGGAGGAAGCCCACCTGGTGGCGCACTGTGGTTAGGCCCGGGGAGCTGGCAAAAAATAAAATTGCAATAT
TCATGTAAGCAAAAAAAAATCGATTGTCAGCGAGAATTCGTTTTCCCTGTTGCAATGCACAGCAAATTTTCGAGATAAAT
GTGTCACCTGACTAGAATTGATAAATTGCAAGATATTTATTTCTTCTCTCTCGTTGCAACGCCTAGACATGTTTGCTATA
TTACAAAAAATATGTTCAAAAATCAAGAGTTTCAACTAATTTTTATTCAAAACATTTTCATGAATTAATCAATAATAAGT
GATTGTTTTAAAATCAATTTACAGAGCTAGAGATATGAGATGGTTATTTTTTTTCTCTTGTTGCAACGTACGGCCCTTTT
TGCTAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TTAGAAGGCTAATAAGCCTAAAT
TTCTTTTTTTTTATTGACGGGAATAGGCCTAAATTTCTTCATGGTTGTTGCAGCGGGCTCCTTAAGGATATGTACA----
------------ACTTTACCGTTTTGTTTCCTACACATAGTAGAGTACCACGGAGTGAAATGCCTTGACTAGTTATGGTG
AGCTTGACGAGTCATTGGTGTGGTGGCTTGCATGCACAAGTCTAGCCAAGGATCCAATTTAAATCCCACACAGTAGCGCT
AGGATGCAGCAGTACGTACACCTCTAGCTCGTCCTTCCTTTAAGGCGTGGTGGGGC-GGGTCGGTTTCTATGATTCATGT
GATGTCGTTGACAGAAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCG
TCAGAGAGCTATAGAGTTAGACGATAGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCATCTCCCTCCTATATATAC
----------AGAGAGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGACACGAGTGAGAAAGA
CGATCAAGCTGTCAAAAGGAGAAGAGGTCGAGAGGAGGGAAGGTGATCGGTCGATCATGGGGAGGCCGCCGTGCTGCCAC
AAGGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGG
GAACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCCCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGG
TAACCAACTAAGCCACCCA---------------------------------------------------GCGATCGATC
GTCCGGGTTGGTCATGGCGGCCGCCCGTGCGTGCATGGTGATATACATGATCTAATAACAACTCTT---TGGGTTTGG-G
GGAATGTAGATGGGCCGCGATCGCGTCCTACCTGCCACAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTTAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCGCCGCCGCCCTCCAGCTCCGCCGAG
ACAGCTATCAACCTCCCCGGCGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCTGCCTCCAG
CTCCACGGTCGACCACGGCTGCTACGCGGCGTGCAGCAACCCGGAGGTCACCCAGCAGCATACGACGATCACCATGCGCC
GCTCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTC
GACGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCAGCGACCCTTTCATGTC
CTTCGACCGCATATCCGGCACCGGCACCGAGCTGGCTTTCGTCCCTGGCGTT---CAGCAGCAGCAGCAGCAGCCGGTGT
TAATGGGGGGCATCAGCTATGATGACGAGGCCACCAGACAGCAGCAGCAGC---TCCATCATCAGTTGCCACTGTGTTCG
ATCGAGAAGTGGCTTCTCGATGAGGCAGCGGAGCAGGTCGCTGACCTGATGGACCTCTCCGACGGTGGCTGCTCCTCCCT
GCCATTGCTGTACTAGCCAGTACTTCTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCATTGTCACTTTCCAGATAC
ATAGTTAATCGTTTCTACAGTCAATTACATGCATACACATCCATATATATATAATAGAGAGGCTAAGTAATTTCTGTTAA
TTACATGTTCTAGCT-AGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGGCAA-----------
-----------AAGGAAGTTAATTATAGAGACGTTTACTAATGGTGCATAT-TACACT-GGGATGGGATGATGAGAAGAA
GGCCAAGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAATAACGGCCGCGACGTGATGTATGATCTGATCTGCAAGC
ATGATGCGACTAAGGGTTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGAAATGTTTTTTCGTTTCTGGGTTATAG
TG-CAAGCAAGCTGAAGTGTTCCAGCTTAGCTTACCCGGTGTTGAATTGTACGGAGTATGAATATAAGTTAGTGAACCCT
TCTGTTTTTGTCTTGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGATCATGTACGGTGTGACATGAAT
GCTACCCAAACTTGTTAGTGGAAAAAAAGCTAGAGAGAGGGGATATGTCCCTGTCGGCAACGGCAGATGG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TCCCTGATCACATTCACTGCAAAAGAAAAAAAAAGATGATCACATTCA
CTGCAAAAAAAAAAAAGAAAGCAACTCGCAGATTATAACAAAAAAATAATACTCCCTCCGTCCAACAATATAA
>chr5D_65
----------------------------------------------------------------A---------------
---ATCTATTGGTCAGAACTTCAGTAAAAATCTTGAGGTGCATGTTCCAGTAGTTCTT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GATAGGTAACGAAA
TTTAGGTA---CACTTTACCGTTTTGTTTCCTGCACATAGTAGAGTACGGCGGAGTGAAATGCCTTGACTAGTTATGGTA
AGCTTGACGAGTCACTGGTGTGGTGGCTTGCATGCAGAAGTCTAGCCAAGGATCCGATTTAAATCCCACACAGTTGCGCT
AGGATGCAGCAGTACGTACACCTCTAGCTCGTCCTTCCTTTAAGGCGTGGTGGGGC-GGGTCGGTTTCTATGATTCATGT
GATGTCGTTGACAGAAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCG
TCAGAGAGCTATAGAGTTAGACGATAGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCATCTCTCTCCTATATATAC
GGAGAGGGAGAGAGAGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGACACGAGCGAGAAAGA
CGATCGAGCTGCCAAAAGGAGAAGAGATCAAA------GAAGGTGGTCGGTCGATCATGGGGAGGCCGCCGTGCTGCGAC
AAGGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGG
GAACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCCCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGG
TAACCAACTAAGCCGTCCA---------------------------------------------------GCGATCGATC
ATCGAGGTTGGCCATGGCGGCCGCCCGTGCGTGCGTGGTGATATACATGATCTAATTACAACTC---TTTGGGATTGGGG
GGAATGTAGATGGGCCGCGATCGCGTCCTACCTGCCACAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCGCCGCCGCCCTCCAGCTCCGCCGAG
ACAGCTGCCAACCTCCCCGGCGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAG
CTCCACGGTCGACCACGGCTGCTACGCGGCGTGCAGCAACCCGGAGGTCACCCAGCAG---ACGACGATCACCATGCGCC
GCTCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTC
GACGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTC
CTTCGACCGCATGTCTGGCACCGGCGCCGGGCTGGTTTTCATCTCTGGCGTTCCGCAGCAGCAGCAGCAGCAGCCGGCGT
TAATGGGGGGCATGAGCTATGATGACGAGGCCACCGGACAGCAGCAGCAGC---TCCATCATCAGTTGCCACTGTGTTCG
ATCGAGAAGTGGCTTCTCGACGAGGCGGCGGAGCAGGTCGCTGACCTGATGGACCTCTCCGACGGTGGCTGCTCCTCCCT
GCCATTGCTGTACTAGCCAGTACTACTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCAATGTCACTTTCCAGATAC
ATAGTTAATCGTTTCTACAGTCATTTACATGCATACACATCCATATATATATAATAGAGAGGCCAAGTAA--TCTGTTAA
TTACATGTTCTAGCTTAGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGAGAA-----------
-----------AAGGAAGTTAATTATAGAGACGTTTACTAATGGTGCATAT-TACACTGGGGATGGGATGATGAGAAGAA
GGCCAGGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAA--ACGGGCGCGACGTGATGTGTGATCTGATCTGCAAGC
ATGATGCGACTAAGGGCTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGAAATTTATTTTTGTTTCTGGGTTATAG
TG-CAAGCTAGCTGAAGTGTTCCAGCTTAGCTTACCCGGTGTTGAATTGTACGGAGTATGAATATAAGTTAGTGAAGCCT
TCTGTTTTTGTCTCGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGATCATGTACGGTGTGACATGAAT
GCTACCCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr4A_1001
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGAC
AAGTTGGGCGTGAAGAAGGGTCCGTGGACGCCGGAGGAGGACATCATCCTGGTCTCCTACATCCAGGAGCACGGCCCCGG
CAACTGGCGGTCTGTGCCGGTGAGCACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCACCGGCATCAAGCGCGGCAACTTCACAAGCCACGAGGAAGGCGTCATCGTCCACCTCCAGTCACTCCTCGGCAACAGG
TATACCTACCACTGATCAACTTCATATCATCAAATCAATGGGTGGCTGGGGCAGTGGCCTGGCGTCCATGGCGATCGATT
TAGCTAAC---------------------------------------------AGTTCCATCTC---TTGCTTT------
-GAATGTAGATGGGCGGCGATCGCGTCGTACCTGCCGCGGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTCAGGAAGCAGCAAGCCATGGGAGCCACTTTCGCGCCGCCG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr4D_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGAC
AAGTTGGGCGTGAAGAAGGGTCCGTGGACGCCGGAGGAGGACATCATCCTGGTCTCCTACATCCAGGAGCACGGCCCCGG
CAACTGGCGGTCTGTGCCGGTGAGCACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCC
GCCCCGGCATCAAGCGCGGCAACTTCACAAGCCACGAGGAAGGCGTCATCGTCCACCTCCAGTCACTCCTCGGCAACAGG
TATACTTACCACTGATGAACTTCATATCATCG-ATCAATGGGGGGCTGGGGCAGTGGCCTGGCGTCCATGGCGATCGATT
CAGCTAAC---------------------------------------------AATTCCATCTC---TTGCTTT------
-GAATGTAGATGGGCGGCGATCGCGTCCTACCTGCCGCGGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACC
TCAAGAAGAAGCTCAGGAAGCAGCAAGCCATGGGAGCCATCTTCGCGCCGCCGGCG---GCATCCTCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
---S--------------------------S----S--------S-S---------------SS----------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-SS--SS-S-SS----SS-SSS---S-----S---SS--------------------------
-------------S---SSS---S-S-S-SS----S-S-S---SSSSSSSSSSS-S-SS-SSSSSS-SS-S-SSS-SSSS
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------S--------
---------------------------------------------------------S-----S----------------
--------SSS--------------------------------------------------------------S------
--------------------------------------------------------------------------------
---S-----------------------S----------------------------S-----------------------
--------------------------------------------------------------------------------
-------------------------S-----------------------------------S------------------
----------S-----------------------------------------------------S-------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------------------------------------------------------------------S-
------------------------------S-------------S---------------------S-------------
------S--------------------S--------------S-------------------------------------
--------------------------------------------------------------------------------
-----S-------------SS-----------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------------------------------------S----------------S-----------------
---------------------------------------------------SSS-----------S--------------
-----------------------------S-----------------S-----S--------------------------
--------------------------------------------------------------------------------
------------------------------------------------S---------S-S-------------------
--------------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSS--S-----------S-------------------------S----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SS-S----------------------S
SSS------------------S---------------------S------------------S-----------------
---------------------------------------------------------S----------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------S--S
--------S--S---------------S-------------------------S---------S---S-----
>forward_1342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GAGCTCACTCCCCTTCATCG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2534
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CTCCATCATCAGCTGCCACT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGCAGGCACGAGTGAGAAAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_2546
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTGCCACTGTGTTCG
ATCGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_1963
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CGTCTTACCTGCCACAGAGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3142
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TCAGCTTAGCTTACCCGGTG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
