>input_sequence_60969
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ATGTCTCGCTGGCAGTCTGCACCTGCTGATATTATTT
GTGATATTGGGGACAGTCTTTTGGATAGTAATTGCCATGACAGTTATGTCGCTATGAGATATGTATGTTCTCTTTGGAAG
TCAGCCATCTCATCTTATCAAAGGCTTTTTCTTCGAGCACATCGATGGATTGTTCTTGAGGAGATCAATGAATTCGGTGA
TTGCACTGTACATCGGGTATTTGTTAATCTTTCAACTGGGCGGATGGTCAAGCGTCGCATTCCTCTTTTGAATGACCATG
TTTATGTTGGATCTTCGGATGGACTACTGATTCTCGTAG-AAAAAAATGAACCTTACTTCGTCAAACTATGGGAGCCATT
CACGGGATATCTTGTGCAATTTACAGCCGGGATCATCCATCAGCAGCCTTCTCATTTTGCCGTCGAGACTCGCGGTGTCC
CTAGACTGTTTCATGCCCCTGGAGGTTTACGCAACCCTCGAGTCATGTGTTATGATGTTAATAATGGCAATTTGGAGGTT
CGATTTGGTGATATGCCAGTTGAGCGTGTAGCAAGTATGACTGCATATAAGAGTGATGTGTTTGTACTTTTCCATAATCG
TCAGTTGTTCAAGATAACCGGGGATGGTCATGAGATGCATGGAGAATTCATTCTAATCCACGAGGCTCCAGCACTTGCAC
CTAGTGCGATGACACACTATTTGGTAGTATCTGGAGGAGGCAATCTTCTTATTTTGGTCATTGGCATTGCAGAGATACTG
ATTTTTTGTGTTGATGTTGAGTTGAGGACCGCTGTCCGTA--TCTATAATATCGGTAGCCAGGCACTTTTCCTTAGTAAC
ACAAGGTGTATCTCTGTTAATGCCGAAAGTTTCCCAACTGTCAGAGAAAATTGTGTATATCAAGCATGCATCTCTGGATA
TAGTGGGCCATGTGGAACTTATGAGTTCAGTTTGATGAGGCCTCGGAAGCGTAAGATTTATCATCAATCATTCGTCAATG
ACGTAACCTACACTCTTGGGGGAAGGCCCTTAAGCATGTGCCCGGTCCTTATACACTACTGTTTATTCAGAAACAAGTGT
AGGAGGCCACTATCCTAG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>chr6D_1_TraesCS6D01G298900
AGTTATTCAAAGATTTTTATGTAGTTATAGACCGCAAGATGCAAGATATTAATGAAGTACACACTGCATTTTTGTGACCT
TAGTAGCGCTCTAGGTCCTTGGTTCGACCCCTGGTGGAAGCAATGTATAAAAATTTCTGGTATTAAGGGTTGGCATGCGT
TTTCCTCTCAGCTTGTCTTCTTTCTCTTTTCTTCCTCCAACGCTGACATGGGCGTTTGGTAGGGTGCACCTCACCCTTTC
GCCCTCCCCAAACCGTTCTCTGGTACCCTGCCATCTAGGCTCTCCCTCTAACCCGTTGACTTCTCTATATCCCATTAGCA
TCCGATCCCACACCGTGTGCGAACCAGTCAAGCTGAGAATCACCTCCACCAGTAACGTTGTATCCACCCAGGCTCCAGCT
CGGTCTTATCAGCAACACAACACCTTGCTGCCACTCAATATAGTTTCCCCTTCTCCGCCTTGGATCTATCTCTTCTTCTT
CTCTCCTTAAATTGAATGACCCAAATTTTGTTACCAAGTAACTTACATATAGTAACATATTTTTT--CATATAGTTAATT
TATTAACTATACTTAAAGTACACAACAAACCTAATCGTTAACATACCATTGTAGCAACATCGTGGACATCACGGAATAGC
ATGAATTTTATTACTCCAACAAGATGTTGTATGCAAAATTTGTGCTCACATATAACATCATCAAACACCAGCTATCAGTG
AGTTTAGTTCTCCATGATGCACTTTGCTAGGTTTCGAATATGCCATAATTTCAGGAAATGAAATCCTTATATATACTCAA
-TTTTTCATGATTTGGTGCACGTTATAGGTTGTGGATACATTTCTGTTGGTTGGTCCACCTCTTACTAGGATGATACATC
GATGTTAGCATATATTAGTTTTTATTTTTTAGGTGCATGTACTTAGAATGTACCAAAACATTATGCATATTATTTACAAT
TTCCTTGTCCCCTATGCAGTTTATTATTGAGTTAGTTGTAGCAATGTCTCGCTGGCAGTCTGCACCTGCTGATATTATTT
GTGATATTGGGGACAGTCTTTTGGATAGTAATTGCCATGACAGTTATGTCGCTATGAGATATGTATGTTCTCTTTGGAAG
TCAGCCATCTCATCTTATCAAAGGCTTTTTCTTCGAGCACATCGATGGATTGTTCTTGAGGAGATCAATGAATTCGGTGA
TTGCACTGTACATCGGGTATTTGTTAATCTTTCAACTGGGCGGATGGTCAAGCGTCGCATTCCTCTTTTGAATGACCATG
TTTATGTTGGATCTTCGGATGGACTACTGATTCTCGTAG-AAAAAAATGAACCTTACTTCGTCAAACTATGGGAGCCATT
CACGGGATATCTTGTGCAATTTACAGCCGGGATCATCCATCAGCAGCCTTCTCATTTTGCCGTCGAGACTCGCGGTGTCC
CTAGACTGTTTCATGCCCCTGGAGGTTTACGCAACCCTCGAGTCATGTGTTATGATGTTAATAATGGCAATTTGGAGGTT
CGATTTGGTGATATGCCAGTTGAGCGTGTAGCAAGTATGACTGCATATAAGAGTGATGTGTTTGTACTTTTCCATAATCG
TCAGTTGTTCAAGATAACCGGGGATGGTCATGAGATGCATGGAGAATTCATTCTAATCCACGAGGCTCCAGCACTTGCAC
CTAGTGCGATGACACACTATTTGGTAGTATCTGGAGGAGGCAATCTTCTTATTTTGGTCATTGGCATTGCAGAGATACTG
ATTTTTTGTGTTGATGTTGAGTTGAGGACCGCTGTCCGTA--TCTATAATATCGGTAGCCAGGCACTTTTCCTTAGTAAC
ACAAGGTGTATCTCTGTTAATGCCGAAAGTTTCCCAACTGTCAGAGAAAATTGTGTATATCAAGCATGCATCTCTGGATA
TAGTGGGCCATGTGGAACTTATGAGTTCAGTTTGATGAGGCCTCGGAAGCGTAAGATTTATCATCAATCATTCGTCAATG
ACGTAACCTACACTCTTGGGGGAAGGCCCTTAAGCATGTGCCCGGTCCTTATACACTACTGTTTATTCAGAAACAAGTGT
AGGAGGCCACTATCCTAGGTGTAAGGATTAAGTTGGGTAAAATAAATCAAGGTTGTGGCAGTACTGGGCAACTTTCTTTT
TACTTATCTGCGAGGAGTGAAGTGAACATGTATTGTTGTCATTATACTGAATGTTGCTACTTAGTTATTTGTTTTAGTTA
TTGACCATTCCTAAGTTTAATTTATATGCATGCTTTTGATGTTTGTAGTAACTCATGCTTTTGGTACATAGATTGACCAT
TTAATGATGACTGTATGGCTACAC------------------------------TTCACAAGATAAGTTGACAGTACATA
CCTCATGACAACCATTCTGGACCTTACTATTAATTATATGTGAATGAAATAAATTGCAAGGAATA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CATTTCAAATGTTACAAGATTGTTTATGAT
ATATATATTTAT----------ACTTAAGTTATCAAGTATATGGTTTCTATTTGGCAAAGGTGGTGGGAAACACTGTTTT
TCGTACTCTTTTCAGAGGAACAGACGGTAACATAACCAAG-AAAATAAGAGATAGTGTTTTGGCGAAAACTTTGTACTAT
GAAGTTCTAATATTAGTGATGTAA-CATGTACAATTCTTATTTATTCTGAAATGAAAGTGAATTGTCATTTTAATACGAG
AAAAGTCCACATTTCAAC-CCCGAACTAACCACATGGTTTAATTTACAACCCTGAACCCCGAAACT-------AGTCAAA
ACACACCG-GAACTAACCTCGAGATTCAAAACTCAACCCTAGTCTTGGTTTTGGGCTGGTTAACAGTTTTTACCCCAGTC
AATGTTGACTGGGTAGTTAAAAAGGTGAAATTAATCTCAACAAAGCATAGCTAAAAAAATATGCCAGAAAGGTGAAATTT
ATTATCTTTATGCCAATACAAATCGAATGAAACTCATACCACGAACCTCGTATTGTACATCTACTAACTCACCAAGCCAA
TGGCTAAATTCTTTTGGAGTAGTTATCTTGACAAGAAGGCAATGCATTAGGTCTCTTGGGATAACCTAGTGACACCAAAG
TGCAAGGGGGGCAT
>chr6B_1
AGTTATTTAAACATTTTTATGTAGTTATAGACCGCAAGATGCAAGATATTAATGAAGTACACACTGCATTTCTGTGACCT
TAGTAGTGCTCTAGGTCCTTGGTTCGACCCCTGGTGGAAGCGACGTATAAAAATTTCTGGTATTAAGGGTTGGCATGCGT
TTTCCTCTCAGCTTGTCTTCTTTCTCTTATCTTCCTCCAACGCTGACCTAGGCGCTTGGTATGGTGCACCTCACCCTTTC
GCCCTCCCCAAACCGTTCTCTGGTCCCCTGCCATCTAGG-TCTCCCTCTAACCCATTGACTTCTCTAGATCCAATTAGCA
TCTGATTCCACACCATGTGCGAACCAGTCAAGATGAGAATCCCCTCCACCACTAACATTGTATCCACCCAGGCTTCAGCT
CGGTCTTATCAGCAACACAGCGCCTTGCTGCCACTCACCATAGTTTCCCCTTCTCCGCCTTGGATCTATCTCTCCTTCTT
CTCTCCTTAAATTGAATGACCCAAATTTTGTTACAAAGTAACTTACATATAGTAAACATATTTTT--CATATAGTTGATT
TATTAACTATACTTAAAGTACACAACAAACCTAATCGTTAACATATCAATGTAGCAACATCGTGGATATCACAGAATAGC
ATGAATTTTATTACTCCAACAAGATGTTGTATGCAAAATTTGTGCTCGCATATATCATCATCAAACACCAGCTATCGGTG
AGTTTAGTTCTCCATGATGCAATTTGCTAGGTTTCGAATATGCGATATTTTCAGGAAATGAAATCCTTATATATGCTCAA
-TTTTTCATGATTTGGTGCATGTTATAGGTTGTGGATACATTTCTGTTGGTTGGTCCACCTCTTACTAGGATGATACATC
GATGTTAGCATATATTAGTTT-TATTTTTTATGTGCATGTACTTAGAATGTACCAACACATTTTGCATATTATTTACAAT
TTCCATGTCCCCTATGCAGTTTATTATTGAGTTAGTTCTAGCAATGTCTTGCTGGCAGTCTGCACCTGCTGATATTATTT
GTGATATTGGGGAGAGTCTTTTGGATAGTAATGGCCACGACAGCTATGTCGCTATGAGATATGTATGTTCTCTTTGGAGG
TCAGCCATCTCATCTTATCAAAGGCTTTTTGTTCGAGCACATCGATGGATTGTTCTTGAGGAGATCAATGAATTCAGTGA
TTGCGCTGTACATCGGGTATTGGTTAATCTTTCAACTGGACGGATGGTCAAGCGTCGCATTCCTCTTTTGAATGACCATG
TTTATGTTGGATCTTCGGATGGACTACTGATTCTCGTAG-AAAAAAGTGAACCTTACTTTGTCAAACTATGGGAGCCATT
CACGGGCTATCTTGTGCAATTTGCAGCCGGCATCATCCATCAGCAGCCTTCTCATTTTGCCGTCGAGACTCACGGTGTCC
CTAGATTGTTTCATGCCCCTGGAGGTTTACGCAACCCTCAAGTCATGTGTTATGATGTTAGTAATGGAAATATGGAGGTT
CGATTTGGTGATATGCCAGTTGAGCGTGTAGCAAGTATGACTGCATATAAGAGTGATGTGTTTGTACTTTTCCATAATCG
TCAGTTGTTTAAGATAACCGGGGCTGGTCATGAGATGCATGGAGAATTCATTCTGATCCACGAGGCTCCAACACTTGCAC
CTAGTGCAATGACACACTATTTGGTAGTATCTGGAGGAGGCAACCTTCTTATTGTGGTCATTGGCATTGCAGAGATCCTG
ATTTTTTGTGTTGATGTTGACTTAAGGACCGCTGTCCGTA--TCTATAATATTGGTAGCCAGGCACTTTTCCTTAGTAAC
ACAAGGTGTATCGCTGTTAATGCCGAAAATTTCCCAACTGTCAAAGAAAACTGTGTATATCAAGCATGCATCTCTGGATA
TAGTGGGCCATGTGGAATTTATGAGTTCAGTTTGACGAGGCCTCGGAAGCGTAAGATTTATCATCAATCATTTGCCAATG
AAGTAACCTACGCTCTTGGGGGAAGGCCCTTAAGCATGTGGCAGGTCCTTATACACTACTGTTTATTCAGAAACAAGTGT
AGGAGGCCACTATCCCAGGTGTAAGGATTAAGTTGGGTAA--TAAATCAAGGTTGTGGCAGTACTGGGCAACTTTATTTT
TACTTATCTATGAGGAGTGAAGTGAACATGTATTGTTGTCATTATACTGAATGTTGCTACTTAGTTATTTGTTTTAGTTA
TTGACCATTTCTAAGTTTAATTTATATGCATGCTTTTGATGTTCATAGTAACTCATACTTTTGATACATAGATGGACCAT
TTAGTGATGACTGTATGTCTACAC------------------------------TTCACAAGATAAGTTGACAATACATA
CCTCATAACAACCATTCTAGACCTTACTATAAACTATATGTGAATGAAATAAATTGCAAGGCAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CATTTCAAATGTTACAAGATTGTTTCTGAT
ATATAT--TTAT----------ACTTAAATTACCAAATATATGGTTTCTATTTGGCAAAGGCAGTGGG-AAAACTGTTTT
TCGTACTCTTTTCAGAGGAACAGACAGTAACATAACCAAGAAAAATAAGAGATAGTGTTTTCGCGAAAAATTTGTACTAT
GAAGTTCTAATATTAGTGATGTAA-CGTGTACAATTCTCATTTATTCTGAAATGAAAGTGAATTGTCATTTTAATATGTG
AAAATTCCACATTTCAAC-CCCGAACTAACCACATGGTTTAATTTACAACCCTGAACCCTGAAACC-------GGTCGAA
ACACATCCCAAACAAACCTCAAGATTCAAAACTCAACCCTAGTCTTGGTTTTGGGCTGGTTAACCGTTTTTATCACAGTC
AATGTTGACTGGGTAGATCCACATTAGCAATTAATCTCAACAAAGCATTGCT-AAAAACTATGCCA-AAAGGTGAAATTT
ATTATCTTTATGCCAATACAAATCAAATGAAACTCATACCACGACCCTCGTATTGTACATCTACTAACTCACTAAGC---
--------------------------------------------------------------------------------
--------------
>chr6B_1
AGTTATTCAAACATTTTTATGTAGTTATAGACTGCAAGATGCAAGATATTAATGAAGTACACACTGCATTTCCATGACCT
TAGTAGCGCTCAAGATCCTTGGTTCGACCCCTGCTGGAAGCGACATATAAAAATTTCTGGTATTAAGGGTTGGCATGCAC
TTTCCTCTCGGCTTGTCTTCTTTCTCTTATATTCCTCCAACAGTGACATGGGCGCTTGGTAGGGTGCACCTCACCCTTTC
GCCCTCCCCAAACCATTCTCTAGTCCCCTGCCATCTAGGCTCGCCCTCTAACCCGTTGACTTCTCTAGATCCAAATAGCA
TCCGATCCCACACCGTGTGCGAACCAGTCCAGCTGAGAATCCCCTCCACCATTAACGTTGTATCCTCCTAGGCTTCAACT
CGGTCTTATCAGTAACACAGTGCCTTGCTGCCACTCACCATAGTTTCCCCTTCTCTGCCTTGGATATATCTCTCCTTCTT
CTCTCCTTAAATTGAATGACCCAAATTTTGTTACCAAGTAACATATATATAGTAAATGTATTTTTTCCATATAGTTGATT
TATTAACTATACTTAAAGTACACAACAAACCTAATTGTTAACATATCATTGTAGCAACATCATGGACATCACATAATATC
ATGAATTTTATTAATGCAACAAGATGTTGTATGGAAAATTTGTGCTCGCATATATCATCGTCAAACACCAGCTA-CGGTG
AGTTTGGTTCTCCATGATGCACTTTGCTAGGTTTTGAATATGCCATATTTTCAGGAAATGAAATCCTTATATATACTCAA
-TTTTTCATGATTTGGTGCATGTTATAGGTTATGGATACATTTCTGTTGGTTTGGCCACCTCTTACTAGGATGATACATC
GATGTTAGCATATATTAGTTT-TATTTTTTATGTGCATGTACTTAGAATGTACCAAAACATTTTGCATATTATTTACAAT
TTCCTTGTCCCATATGCAGCTTATTATTGAGTTAGTTGTAGCAATGTCTCGCTGGCAGTCTGCACCTGCTGATATTATTT
GTGATATTGGGGAGAGTCTTTTGGATAGTAATGGCCACGACAGCTATGTCGCTTTGAGATATGTGTGTTCTATTTGGAGG
TCAGCCATCTCATCTTATCAAAGGCTTTTTGTTCGAGCGCATCGATGGATTGTTCTTGAGGAGATCAATGAATTCAGTGA
TTGCACTGTACATCGGGTATTGGTTAATGTTTCAACTGGACGGATGGTCAAGCGTCGCATTCCTCTTTTGAATGACCATA
TTTATGTTGGATCTTCGGATGGACTACTGATTCTCGTAG-A-AAAAATGAACCTTACTTCGTCAAACTATGGGAGCCATT
CACGGGCTATCTTGTGCAATTTGCAGCCGGGATCATCCATCATCAGCCTTCTCATTTTGCCGTCGAGACTCGCGGTGTCC
CTAGACTGTTTCATGCCCCTGGAGGTTTACGCAACCCTCGAGTCATGTGTTATGATGTTAATAATGGCAATTTGGAGGTT
CGATTTGGTGATATGCCAGTTGAGCGTGTAGCAAGTATGACTGCATATAAGAGTGATGTGTTTGTACTTTTCCATAATCG
TAAGTTGTTCAAGATAACCGGGGCTGGTCATGAGATGCATGGAGAATTCATTCTGATCCACGAGACTCCAACACTTGCAC
CTAGTGCGATGACACACTACTTGGTAGTATCTGGAGGAGGCAATCTTCTTATAGTGGTCATTGGTATTGCAGAGATTCTG
ATTTTTTGTGTTGATGTTGAGTTGAGGACCGCTGTCCGTA--TCTATAACATCGGTAACCAGGCACTTTTCCTTAGTAAC
ACAAGGTGTATCGCTGTTAATGCCGAAAATTTCCCAACTGTCAGAGAAAACTGTGTATATCAAGCATGCATCTTAGGATA
TAGTGGGCCATGTGGAATTTATGAATTCAGTTTGACGAGGCCTCGGAAGCGTA-------TCATCAATCATTCGTCAATG
AAGTAACCTATGCTCTTGGGGGAAGGCCCTTAAGCATGTGGCAGGTCCTTATACACTACTGTTTATTCAGAAACAAGTGT
AGGAGGCCACTATCCTAGGTGTAAGGATTAAGTTGGGTAAAATAAATCAAGGTTGTGGCAGTACTGGGCAACTTTCTTTT
TACTTATCTATGAGGAGTGAAGTGAACATGTATTGTTGTCATTATACTGAATGTTGCTACTTAGTTATTTGTTTTAGTTA
TTGACCATTCCTAAGTTTAATTTATATGCATGCTTTTGATGTTTGTAG-AACTCATGATTTTGGTACATAGATGGACCAT
TTAATGATGAATGTACGGCTAGAC------------------------------TTCACAAGATAAGTTGACAGTACATA
CCTCATAACAACCATTCTAGACCTTACTATTAACTATATGTGAATGAAATAAATTACAAGGCATACTACCTCCGTTCGGG
TTTAAAAGGCCCGTCAGCCTCGATGCCCCGTCCGTAATTTTAAGGCCCATTGTAATTATGGCGCAACTTTTCTACTAGAA
TCGTTAGCCATCAAGGAAGTCGATTGGCGAAGCGTGAGAAGTCGTACTGCATGCAGGCCTGGGAGACGAAGCTGCATGTA
AAGCGGGGGTGTTGGGCTGCATGCAAGCGCTTAATTATCGCTGCAGCCAGTGCATGCACGATTCATTCACGGCGCTTTCT
CTCTTTCATTGGCCTACACGATTACCGGTGCATATAGAGTTAATTTTTCTCATAACTGATGTGGAGTAATTTTTGCCTTG
GTCCTAATGCTTTGGTCGGGGGGGCCTTTTAAACCCGGGCGGAGGTAGTACATTTCAAATGTTACAAGATTGTTTCTGAT
ATATAT--ATATGTACACACACACTTTAATTATCAAATATATGGTTTCTATTTGGCAAAGGCGGTGGG-GAAACTATTTT
TCGTACTCTTTCCAGAGGAACAGACGGTAACATAACCAAG-AAAATAAGAGATAGTGTTTTGGCGAAAAGTTTGTACTAT
GAAGTTCTAATATTAGTGATGTAA-CGTGTACAATTCTTATTTATCCTGAAATGAAAGTGAATTGTCATTTTAATATGAC
AAAAGTCAACAATTCAACCCCCGAACTAACCACATGATTTAATTTACAACCCTGAACCCCGAAACT-------GGTCAAA
ACACAACCCGAACTACCCTCGAGATTCAAAACTCAACCCTAGTCTTGGTTTTGGGCTGGTTAACGGTTTTTACCGTAGTC
AATGTTGACTGGGTAGTGCCACATCAGCAATTAATCTCAACAAAGCACAACTAAAAAAATATGCCA-AAAGGTGAAATTT
ATTATCTTTATGCCAATACAAATCAAATGGAACTCATACCA---------------------------------------
--------------------------------------------------------------------------------
--------------
>chr6B_272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CATCCAAGCCCTCCCTCTAAACCGTTGACTTCTCTAGATCCAATTAGCA
TCCCATCCCACACCTTATCTGAACTAGTAAAGCTCAGAATCCCCTCCACCACTGGCACCATATCCACCCTGGCTTTAGCT
TGGTCTTGTTAGTAACACATTGCCTCGCTTCCACTCACCATAGTGTCCCCTTCTCAGC-TTGGATCAATCTCTCCTTCTT
CTCTCCTTACATTGAATGACCCAT-TTTTGTTTCCAAGTAACTTACATATAGTTAAGATATTTTTTCCATATAGTTGATG
TATTAACTTTACTTGAAGTACACAACATACCTAATCGTTAACATACCATTGTAGCAACATCGTGGACATCACATAATAGC
ATGAATTTTATTACTCTAACAAGATGTTATGTGCAAAATTTGTGCTCGCATATATCATGATCAAACACCAGCTATTGATC
TGTTTAGTTTTTCATGATGCACTTTGTTAGGTTTAGAATATGCCATATTTTCAGAAAATGAAATCCTTATATATACATGA
TTTTTTCATGACTTGGTGCATGTTATAGGTTGTGGAAACATTTCTGTTAGTTGGTTCACCTCTTACTAGGATGATATATC
GATGTTAGCATATATTAGTTT-TATTTTTTACGTATATGTATTTAGAATGTACCAATTTTTTTTGCATATAATTTACAAT
TTCCTTGTCTCCTATGCAGATTATTATTGAGATAGTCCTAGCAATGTCTCGCTGCCATTCTATGCATGTTGATATTATTT
GTGATATTGGGGAGTGTCTGTTGGATAGTAATGGACATGATAGCTATGTCGCCATGAGATATGTATGTTCTTTTTGGAGG
CATGCCATCTCATCTAATCAAAGGCTTTTTGTTCGAGCACATTGATGGATTGTTCTTGAGGAGATCAATGAGTTCAGTGA
TTGCACTAGATATCATGTATTGGTTAATCTTTCAACTGGACAAATGGTCAAGCTTTGCATTCCTCTTTTGAATGACCATG
TTTATGTTGGATCTTTGGATTGACTACTAATTCTCATAGCA-AAAAATGAACTTTACTTAGTGAAACTATGGGAGCTGTC
CACGGGCTATCTTGTGCAGTTTGCCGTCGGGATCATCCATTAGCAGACTTCTCATTAGGCCATCAAGACTCGCAGTGTCC
CTAGACTGTTTTATGCCCCTGGAGGTGTATACAGCCATCGAGTCATGTGTTGTGATGTTAATGATGGCAATTTGGAGGTT
TGATTTGGTGACATGCCAGTTGAGCGTGTAGCAACTATGACTGCATATAAGAGTGACGTGTTTGTACTTTACCATAATCA
TCGGTTGTTCAAGATAACTGGGACTAGTCATGAGATGCATGGA-AATTCATTCTGATCCATGAGGCTCCAGGACTTGCAC
CTAGTGCAATAACACAATATTTGGTTGTATCTGGAGGAGGCAAGCTTCTTCTTATGGTCATTGGCATTGAAGATATACTA
ATTTTTGGTGTTGATTTTGAGTTGAGGACTGCTGTCCGTATATCTATAATACCGGTAGCCAAGCACTTTTCCTTAGTCAT
GCAAGGTGTATCGCTGTTAATGCCGAAAATTTCCCAACTGTCAGAGAAAACTGTGTATATCAAGCATGCATCTATGGACA
TAGTGGGCCATGTGGAGTTTATGAGTTCAGTCTGACGAGGCCTCTGAAGCGTAATATTTATCATCAAGCACTCTTGAATG
ACATAACCTGCTCTCTTAGGGGAAGGCCCTTAAGCATGTGACAGGTCCTTATACACTACTATTTGTTCAAAAACAAGTAT
AGGAGGTCACTATCCTATGTGTAAGGATTATGTTGGGTAAAATAAATCAAGGTTGCAGTAGTACTGGGTAACTTTATTTT
TACTTATCTGTGAGGAGTGAAGTGAAAATGCAATGTTGTCATTATAATGAATGTTGCTACTTAGTTACTTGTTTTAGTTA
TTGACCATTCTTAAGTTTAATTTATATGCATGCTTTTGATGTTTGTAGTCAATCATG--TTTTGTACATAGATGGACCAT
TTAATGACGACAATATGGTTACACTTCACATGATAAGTTTTTTTCTGAACAATCTTCACATGATAAGTTGACAGTATATT
CCTCATAACAGCCATTCTGGACCTCACTATTAACTATATGTGAATGAAATAAATTGCAAGGCATA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TATTTAAAACATTACAAGATTGTTTCTAAT
ATATAT---TAT----------ACTTAACTTATCAAATATATGGTTTACATTTTGCAAAGGCGGCGAG-AAAACCGTTTT
TCATAGTCTTTTCAGAGGAACAGATAGTAACATAACCAAG-AAAATAAGAGATAGTGTTTTGACAAAAACTTTGGACTAT
GAAGTTCTAATATTAGTGATGTAATCATGTACAATTCTTTTTTATTCTAAAATGAAAGTAAATTTCCCTTTTAATATGAG
AAAAGTCCACATTTCAAC-TCCGAACAAACCACACGGTTTAATTTACATCCCTGAACCCTGAACCCCAAAAACGGTCGAA
ACACACCTCGAACTAACCTTGAGAGTCAAAACTCGACCCTAGTCTTAGTTTTGGGCTGGTTAACAGTTTTTACCACTACC
AATGTTGACTGGGTAGTGCCAGATCAGGAATTCATGCCAACAAAGCACGAGTAAAAAAATATGACA-AAAACTGAAATGT
ATTATCTTTATGCCAACACAAATCAGATAAAACTCATACCACGACCCTCGTATTGTACAT--------------------
--------------------------------------------------------------------------------
--------------
>SNPs
-----------S-----------------------------------------------------------S--------
-----------------------------------------S-S------------------------------------
----------------------------S-------------------------S-------------------------
------------------------S------------------------------------------S----S-------
-----------------------------------------S---------S----------------------S-----
-------------------S-S---------------SS----------------------------------S------
-------------------------------------------------------SSSSS----------------S---
------------------------------------------------------------------------S-------
-----------------------------------------------S------S---------------------S---
-----------------------------------------------S--------------------------------
--------------------S-----------------------------------------------------------
---------------------S---------S------------------------------S-----------------
--------------------------------------------------------------------------------
-------------S------------------S----------S----------------------------------S-
------------------------------S--------------------------------------------S----
---------------------S-----------------S----------------------------------------
--------------------------------------------------------------------------------
------S---------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S------------------------------S-------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
------------S---------------S---------------------S-----------------------------
-----------------S-----------------S--------------------------------------------
-----------S----------------------------S-S-------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
------S--------------------------S---------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------SS--------------------S-------S------------------------S------S--S--------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------------------------S------
-------S------------------------------------------------------------------S-----
------------------SS-S-SSS-S--------------------------------------S-------------
------------------------S-------------------S---------------------------S----SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------ACACCTTGCTGCCACTCAAT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------
>reverse_1383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------ACAGCCGGGATCATCCATCA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>forward_1367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TATGGGAGCCATT
CACGGGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
>reverse_3509
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GTGACACCAAAG
TGCAAGGG------
