>input_sequence_60947
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-------------------------------------------ATGGCACGGCAAAATGCTGCCTCGGC------GCTCG
CCGCGGCGTTGGTCCTCGGAGTCTTCGCACCCATCCTTACCGGTAAGCTACCAACCAGCAC--------GACTCCGTTGA
TCACCAGTGTCAGACTAG----GAGTCTATGACCGATTACTCGCAATGTT----ATCGTGTGCAGAGGTGCAATCCATCG
GCGTGTGCAACGGGATGCTCGGCGACAA------CCTGCCGTCGCCGGCCGACGTGGTGCAGTTCTACCAGTCCCAGGGC
ATCGGCGCCATGCGCATCTACGCGCCGGACCCCGAGACGCTCCGGGCCCTCGACGGCACCGGCATCGACCTCATCATGGA
CGTGGGCAACGGCGACCTCGCCGCCCTCGCCTCCGACCCTGCAGCGGCGGCCGGCTGGGTCCGGGACAACGTGCTCGCCT
AC---CCGGGCGTCCGCGTCAAGTACGTCGCGGCCGGCAACGAAGTGGACGGCGACGACACGCGGAACATCCTCCCGGCC
ATGAAGA------------ACCTCAACGACGCGCTCGCCGCGGCCG----------GCCGCGGCGACGTCAAGGTGTCCA
CCGCGGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCGCCCTCTGACGGCGCGTTCAAGGACGTGTACATGACGGACGTG
GCCCAGCTGCTCAAGGCCACTGGCGCGCCGCTCCTCGCCAACGTGTACCCCTATTTCGCCATAAAGGGCGACCC---CAA
CATCGACCTCAGCTACGCTCTCTTCCAGCAGAGCACCACGACGGTGAGCG---A------CAACGGCCTCACCTACATCA
ACCTCTTCGACGCTATGGTCGACGCGGTGTACACTGCGATGGAGAAGGTGGGCGCAGCTGGCGTGCCCATCGTGGTCTCC
GAGAGCGGGTGGCCGTCGGCAGGCGGCGTTGAGGCAAGCGTCGAAAATGCGCAGACGTACAACCAGAACCTGATCAACCA
CGTCGG--------------------------------------------------------------------------
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-------------GAATGGAACGCCCAAGAGGCCCGGGCCGCTGGAGATGTACATCTTCGCCATGTTCAACGAGAACCAA
AAGGACGGGGACGAGACGGAGAAGAACTTTGGGCTGTTCAACGGCCCCGACAAGTCGCCGGTGTACCCTCTAAGTTTCAA
CAATTAA-------------------------------------------------------------------------
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-------------------------------------
>chr3D_1_TraesCS3D01G477100
ACGATCATTTTCCCAATATCATGAACATGACTTTTTTCCTCGACCATTTTTTCCGAATCGCGATTTTTTTATAATTTGCA
AACAGTTTTGCAAAACCACCAACATTTTTTGAATCTGCAAAAAATTTATGAATTCGTAAACATTTTTTTAATTCACGTAT
ATTTTATAATTTCTCATACA--TTTTTTTGAAGACTCAAACTTTAAAAATTTGAAAATCCCGAATTAACTTAAAGAAGAA
AGAAAACAGAATGAAAAAAAAAACAGTT----------------GAGT------------GAAACCCCGCACATGGGCCA
GACCATGAAAGCATACATGGGGGAGGACATGCGTTAGAAAAGGGAGTTAAAAAGTGTGGAAGCCAGGGATGTAAGCAGAT
ATGCGCCAACCACTCTGCTGCTTGTGGATCAGTGG---------------------------------------------
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CTTATATCTGTCTCATTTCTTTAAAACAAGAAAGTAGGATGGCAACTTTTGATCCGAAAAATCGAATCGTTTTCTTC--A
CTAATAGATGACATACTGGGTAATTTATAGCAACTTCTGGAAT--TTTTTTTCGACAGACTGCCAGAAGCAATAGGCACT
TTATTATTAGGTAAAGATAAAGATATATATGTGCGCATGTATGAATGCCGATCTTGTATGTATGTACTGTGTTA-AAAAA
AGTTGCGTTACGAACGGATCGATGAGGTGGGAAAAATATGAACGTGACAATTCT----GGGCGCGACTGGTGCAGGGTCT
CAA-----------------------------------------------------------------------------
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----------------------------------------------------AGGCAGCTGGTTGCGTTGGACAGTTGGA
AGTTTGGAACTCATGTACAT---------GTCGCGCCACACAC-CT----GGGCACCTGGCTACCTAACAGAGTGGAAAC
AGATTTGAA-GTCAGGAACGAGAATTGACCAACTACGAACTTGCAACTCGCCAAACTTCTTCGAATCCGGCCGGTATGTA
TATA---------TAGGCCGCGTCTGCATGGTACACTTGCATGCAAAAGGAGT--TGAGTACGTGCTCCAACTGTTTCAT
AGCTACCTGAGGAGAGGAGAG----TGAGTCAGCTGCTCGAAGATGGCACGGCAAAATGCTGCCTCGGC------GCTCG
CCGCGGCGTTGGTCCTCGGAGTCTTCGCACCCATCCTTACCGGTAAGCTACCAACCAGCAC--------GACTCCGTTGA
TCACCAGTGTCAGACTAG----GAGTCTATGACCGATTACTCGCAATGTT----ATCGTGTGCAGAGGTGCAATCCATCG
GCGTGTGCAACGGGATGCTCGGCGACAA------CCTGCCGTCGCCGGCCGACGTGGTGCAGTTCTACCAGTCCCAGGGC
ATCGGCGCCATGCGCATCTACGCGCCGGACCCCGAGACGCTCCGGGCCCTCGACGGCACCGGCATCGACCTCATCATGGA
CGTGGGCAACGGCGACCTCGCCGCCCTCGCCTCCGACCCTGCAGCGGCGGCCGGCTGGGTCCGGGACAACGTGCTCGCCT
AC---CCGGGCGTCCGCGTCAAGTACGTCGCGGCCGGCAACGAAGTGGACGGCGACGACACGCGGAACATCCTCCCGGCC
ATGAAGA------------ACCTCAACGACGCGCTCGCCGCGGCCG----------GCCGCGGCGACGTCAAGGTGTCCA
CCGCGGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCGCCCTCTGACGGCGCGTTCAAGGACGTGTACATGACGGACGTG
GCCCAGCTGCTCAAGGCCACTGGCGCGCCGCTCCTCGCCAACGTGTACCCCTATTTCGCCATAAAGGGCGACCC---CAA
CATCGACCTCAGCTACGCTCTCTTCCAGCAGAGCACCACGACGGTGAGCG---A------CAACGGCCTCACCTACATCA
ACCTCTTCGACGCTATGGTCGACGCGGTGTACACTGCGATGGAGAAGGTGGGCGCAGCTGGCGTGCCCATCGTGGTCTCC
GAGAGCGGGTGGCCGTCGGCAGGCGGCGTTGAGGCAAGCGTCGAAAATGCGCAGACGTACAACCAGAACCTGATCAACCA
CGTCGG--------------------------------------------------------------------------
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-------------GAATGGAACGCCCAAGAGGCCCGGGCCGCTGGAGATGTACATCTTCGCCATGTTCAACGAGAACCAA
AAGGACGGGGACGAGACGGAGAAGAACTTTGGGCTGTTCAACGGCCCCGACAAGTCGCCGGTGTACCCTCTAAGTTTCAA
CAATTAATTAA---AGACGG------------------------------------------------------------
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---------------------------------------------------------AATGCATATTCATGCCTGCATAC
GTATCTACTACCAGGATCTCAATAAGCTGCAAAATAATTCATGAAAACACTTATTAACTAGGTAAGATCGGTGATATGAA
TAAGAGCCATTATGTTGCATAAAGAATCGTTTCCCCTTCCGTACAAAAATCTATCTATCTATCTATATCTATATCTATAT
CTATATCTATATCTATCTATCTATATACCTATACTAATTCTGGATTAACCCAGAGTATTAACGCAAAAGAAATTCCCATG
TTAATACAAGAAAACGAAAAAAATTTAAGAATCATTTATTTTTTGGGACTGTGTTTCTACCGTCCAGATCTAAAC-TACA
ATCGCTCAGGACTTGCAAAAACGTGGAGTGCATGGACTAAGTTATCTGATAGCAAACCGCTCAAGAAAAAAAT--TATCG
GGTAGCAATCAAATCCCAA-CTTTCTTTTAAAAAACAAATCCCAACTGTATTTTTTTTGAAGCTAATCCCAACTGTATTA
GGCATA--TGCGTTATCTTCATGGCTTCCTAGCACGCATCTCCTTTCCCTCGCGCATCGTCTTCTTCCTGAGTCTGGATA
CTGACACGAGTTAGATCAGGCGGCAGGTCACTTCTCCCGATTGATTTGTATTGCTCCACCCCAAACAAGTTAGGGCGGGC
TTGGCCTCAGTCCTGTGGTGCCATCAGCCCCATTCTTTTT------------------------GAGATTGTCAAGCAGA
AGATGACTTGCTGTTCGCCGCCGCCAAGTTCTACTGCCATGATCTCCGGTGCTCGAGGGATGGTGTTACCGCTGCAGCCA
GACATGATGTTGCGTGTACACACAACACCAACGTCAGATTATATGGCTGGTCGTCGAACATGTGGATTCAATGCCCACCG
CTGCCGAAAGCTGCTGCAGGTCACCGCTGCTCCCTTCATCACCACCGCCACAAAGTTCTATTGACACGAGCTCCACTTCT
CAAAGGATGGTGTTGCCGCTGCAACAGTCAACATTGC
>chr3A_1
ACGATCATTTTACCAAAATCATGAACATGATTTTTT---CCAACCATTTTTTTGAATCGTGA--TTTTTTATAATTTGCA
AACAGTTTTGCAAAACTACCAACATTTTTTGAATCTGTGAAAATTTTATGAATTTGTAAACATTTTTTGAATTCACGTAT
ATTTTTTTATTTCTCAAATT-----------AAACTCAAACTTCAAAATTTTGAAAATACCGAATTAGCTTAAAGAAGAA
ACAAAATATAATGAGAAAAGAAAAATAAAATAAAAATAACAGTGGAGT------------GAAGCCCCGCACATGGGCCG
GCCCATGAAGGCATACATGGGGGAGGACATGCGTGAGAAAAGGGAGTTAAAAAGTGTGGAAGCCAATGATCGAAGGAGAT
ATGCGTCAACCACTCTTGTTGATCGGTGGCTTAGAGCAACTCCAACGGGCCGACCCAAATGGACGGCAATTTCGTCCGCC
TTTTGTTCGTTTGGGTTGGCCGTCCGCCCTGCATCCGTCCTCTTTTAGATTTGGGTCGGCAGCATGCCAACGCGTCGACC
CATACGTGCCAGCGTGGCCGACTGGCCGCCCAATATTTACATTGATTTGCATTCAAACATATTATCAAATAACACAGTTT
TATCGAATAAAAATATTATAGTTTTACAAGCCGGATACAAGTAAAAATGTTTCACATAGTTTTGCAAACGAATAAAAGAA
GATACATCTATTGGTTGCCAACATGAGCCCACATATGCTCAACCAAATCATTTTGTAGCTGCACGTGAGTTTTTCAATCA
CGCATGTCTTCATGAAATTGGGTGAACTGTTCAAATGTTGCCGCTACTCCATACTCAGGCACAACATTCTCACGCTGAAA
CCGAAACCCTTGATCGTACAGACGTACCGGCCGCTCGTCTTCTACGATCATATTATGCATGATCATACAAGCAGTCATCA
CCTCTCACAGTTTCTTCGTGCTCCAGTTATTAGCGAACGATGCCCCATCGAGATTGCAAAACACCAAACGCACGCTCGAC
ATCCTTCCTGGCACTCTCTTGCTCATGGGCAAATATTTTCCTCTTCTTTCCGACAGGGTTGGGTATTGTCTTGACAATAG
TGGTCCACTGAGGATAGATACCATCACCCAGGTAGTATCCTTTGTCGTAGTTGTGTCCGTTGACAGTAAAGTTCACTGGT
GGGATGTTGCCTTCGGCAAGCCTAGCAAACACCGGCGAGCGCTGAAGCACGTTCATATCATTGTGTGATCCAGACATGCC
AAAGAAAGAGTGCCAGATCCAGAGATTTTGAGACGCCACGGCCTCTAATATGACAGTGCAAGCTGGCGAGGGGAGTCGCG
GCGCGCACGGACCAGCTAGCTGCCTTGCTGACGTCCAACGAGTGGGTCGGCGTCTGACGAGCGTGCCGGTGAGGAACTGA
CCCCTCTTGGTCGCGGGCGGCTGTGCGGTTGGGGGAGCGGCGGTGGGAAGCAGTTTGCTCATCGGCGGTGGCGGGGCGAC
GGGGGGAGTGAGCAGCGTTGTTGAGCGGATGTGGAGGCGGCAGCAGCTGGCAGAGTCGCAGGCAAAAAAGGACGGCGGCG
TCGGCGACGAAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGCCAATGAGCCACCGACCAGCAGGCTCGGGGAAAGGAGAAGGCGAGCGTGCGCGCGTCCG
CGCCGACGCAAATCCGGCTCAAAAATGAACCGGGATGGGTTGCCCGCGGACGAAAAGCGGACGCGTGTCCGTTTGGGTCG
GTGCGTTGGGCCGACTTCTCTGTCCATGCCGACCCAAACGGACGGCGACGGACGAGATGGATCGCCTCATTGGAGTTGCT
CTTATATCGGTATCACCTCTATAAAACAACAAAGTAGGACAGCAACTTGTGATCCAAAAAATCAAATCGTTTCTTCACTA
CTAATGGATGATATAGAGGGTAATTTATACCAACTT-TGGGTT--TTTTTTTGTACAGACCGGCAGAAGCGATAGACACT
TTATTATTAGGTAAAAGTAAAGATATATGTGCAT--ATGTATGTATT---------------------------------
---------------------ATGAGGTGGGAAAAATATGAAGGTGACAATTCTCTCGGGGCGCGACTGGTGCAGGGTCT
CAA-----------------------------------------------------------------------------
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----------------------------------------------------AGGCAGCTGGTTGCGTTGGACAGTTGGA
AGTTTGGAACTCGGACTCATGTACGCACGGTCGCACCACACAC-CT----GGGCACCTGGCTACCTAT-AGAGTGGAACC
AGCTTTGAA-GTCAGGAACGAGAATTGACCAACTACGAACTTGCAACTCACCAAACTTTTCTGAATCCT----GTATGTA
TATA---------TAGGCCGCGTCTGCATGGTACAGTTGCATGCATAAGGAGT--AGAGTACGTGCTCCAACTGTTTCGT
AGCTACCT-----GAGGAGTG----TCAGCCAGCTGCTCGAAGATGGCACGGCAAAATGCTGCCTCGGC------GCTCG
CCGCGGCGTTGGTCGTCGGAGTCTTCGCACCCATCCTTACCGGTAAGCTACCAACCTGCAC--------GACCCCGTTGA
TCACCAGTGTCAGACTAG----GAGTCTATGACTGATTATTCGCAATGTT----ATCGTGTGCAGTGGTGCAATCCATCG
GCGTGTGCAACGGGATGCTCGGCGACAA------CCTGCCGTCGCGGGCCGACGTGGTGCAGTTCTACCAGTCCCAGGGC
ATCGGCGCCATGCGCATCTACGCGCCGGACCTCGAGACGCTCCGGTCCCTCGACGGCACCGGCATCGACCTCATCATGGA
CGTGGGCAACGGAGACCTCGCCGCCCTCGCCTCCGACCCTGCAGCCGCGGCCGGCTGGGTCCGGGACAACGTGCTCGCCT
AC---CCGGGCGTCCGCTTCAAGTACGTCGCTGCCGGCAACGAGGTGGACGGCGGCGACACGCAGAACATCCTCCCGGCC
ATGAAGA------------ACCTCAACGACGCGCTCGCCGCGGCCG----------GCCGCGGCGACGTCAAGGTGTCCA
CCGCGGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCACCCTCCGACGGCACGTTCAAGGACGCGTACATGACGGACGTG
GCCCAGCTGCTCAAGACCACCGGCGCGCCGCTCCTGGCCAACGTGTATCCTTACTTTGCCAAAAAGGGTGACCC---CAC
CATCGACCTCAGCTACGCGCTCTTCCAGCAGAGCACCACGACGGTGAGCG---A------CAACGGCCTCACCTACATCA
ACCTCTTCGACGCCATGGTCGACGCAATGTACACTGCGATGGAGAAGGTGGGCGCAGCCGGCGTACCCATCGTGGTCTCC
GAGAGTGGGTGGCCGTCGGCAGGCGGCGTCGAGGCGAGCGTCGGAAATGCGCAGGCGTACAACCAGAATCTGATCAACCA
CGTCGG--------------------------------------------------------------------------
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-------------CAATGGAACGCCAAAGAGGCCCGGGCCGCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAA
AAGGACGGGGATGAGACGGAGAAGAACTTTGGGCTGTTCAACGGCCCCGATAAGTCGCCGGTGTACCCTCTAAGTTTCAA
CAATTAATTAA---AGACGG------------------------------------------------------------
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---------------------------------------------------------AATGCATATTCATGCCTGCATAC
GTATCTACTACTTCGATCTCAATAAGCCGCAAAATAATTCATGCAAACACTTATTAACTAGGTAAGATCGGTGATATGAA
TAAGACCCATTATGTTGCATAAAGGATCGTTTCCCCTTCCGTACAAAAAT------------------------------
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>chr3B_4
---ATCATTTTTCCAAAATCATGAACATGATTTTATTTCCCGACCATTTTTTCCAAATCATGATTTTTTAATAATTTGCA
AACAGTTTTGCAAAACCACCAATACTCTTTGAATCTGCAAAAATGTTATGATTTCGTAAATATTATTTGAATTTATGTAT
ATTTTATGATTTCTCGAACATTTTTTTTTGAAAACTCAAACTGG-AAATATTGAAAATCCCGAATTAACTTAAAGAAGAA
AGAAAACAGAATGAGAAAAGAAAAGGCAACAAAACAGAATGAAAAAAAATATAGAGGACAGAAGCCCCGCACATGGGCCG
GCCCAAAAGCGCATACATGGGGGAGGGCATGCGTGAAAAAAGCGAGTTAAAAAGTGTGGAAGATGGGGATCGAAGGAGAT
ATGCGTCAAGTACTCTGCTGCTTGTGGATCTGTGG---------------------------------------------
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CTTATATCGGTCTCACCTCTATAAAACAGCGAAATAGGACGGTGACTTTTCATCTGAAAAATCGAATCGGTTTCTTC--A
CTAATGGATGGCATAGCGGGTACTTTATAAGAACTT-CGGGGGTATTGTTTTGGACGGACCGCCAGAAATGATAGACACT
TTATTATTAGGCAAAGATAAAGATATATGTGCAT--ATGTATGAATTATGATCGTCTATGTATGTACTGTGTTAGAAAAA
AGTTGCGTTACGAACGGATCGATGAGGTGGGAAAATAAGAAACGTGACAAGTCT-TCAGGGCGCGACTGGTGCAGGATCT
CAAAGGCACCTTCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAAAGGCAGCTGGTTGCGTTGGACAGATGGA
AGTTTGGAACTCATGTACATGTACGCACGGTCGCGCCACACAC-CTCAGGGGGCACCTGGCTACCTAT-AGAGTGGAACC
GGCTTTGAA-GTCGGGAACTAGAATTGACCAACTACGAACTTGCAACTCGCCAAACTTCTTCGAATCCG----GTATGTA
TATA---------TAGGCCGCGTCTGCTTGGTACAGTTGCATGCAAAAGGAGT--AGAGTACGTGCTCCAACTGTTTCGT
AGCTACCT-----AAGGAGAG----TCAGTCAGCTGCTCGAATATGGCACGGCAAAATGCTGCCTCGGC------GCTCG
CCGTGGCGTTGGTCGTCGGAGTCTTCGCACCCATCCTTACCGGTAAGCAACCAACCAGCAC--------GACTCCGTTGA
TCACCAGTGTCAGACTAGCTAGGAGTCTATGACTGATTATTCGCAATGTTATCGATCGTGTGCAGAGGTGCAATCCATCG
GCGTCTGCAACGGGATGCTCGGCGACAA------CCTGCCGTCGCCGGCCGACGTGGTGCAGTTCTACCAGTGCCAGGGC
ATCGGCGCCATGCGCATCTACGCGCCGGACCCCGAGACGCTCCGGGCGCTCGATGGCACCGGCATCATCCTCATCATGGA
CGTGGGCAACGGCGACCTCGCCGCCCTCGCCTCCGACCCTGCAGCGGCGGCCGGCTGGGTCCGGGACAACGTGCTCGCCT
AC---CCGAGCGTCCGCGTCAAGTACGTCGCGGCCGGCAACAAGGTGGATGGCGGTGACACGCGGAACATCCTCTAGGGT
CATCTTGACCGCGGTGGACACCTTGACGTCGCGACCGCGGTGGACACCTTGACGTCGCCGCGAGGACGTCAAGGTGTCCA
CCGCGGTCAAGATGAGCATGCTCGTGTCCTCCTCGCCGCCCTC-------------------------------------
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>chr3B_723
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-------------------------------------------------------CAGCTGGTTGCGTTGGACAGTTGGA
AGTTTGGAACTCATG------TACGCACGGTCGCGCCACACACCCT----GGGCACCTGGCTACCTAT-AGAGAGGAACC
AGCTTTGAAAGTCGGGAACGAGAATTGACCAACTACCAACTTGCAACTCGCCAAACTAGGCCG-----T----GTATGTA
TATATATATAGCCTAGGCCGTGTCTGCATGGCACACTTGCATGCAAAAGGAGTAGAGAGTACGTGCTCCAACTGTTTCGT
AGCTACCT-----GAGGAGAGAGAGTCAGTCAGCTGCCCAAAGATGACACGGCAACATGCTGCCTCCACGCGCACGCTCG
CCGCGGCGTTGGTCATCGGAGTCTTGGCACCCATCCTTACCGGTAATCTACCAACCTGCAC--------GACTCCGTTGA
TCACCAGTGTCAGACTAGCTAGGAGTCTGTGACTGATTATTCGCAATGTTATCGATCGTGTGCAGAGGTGCAATCCATCG
GCGTGTGCAACGGGATGCTCGGCGACAA------CCTGCCATCGCCGGCCGACGTGGTGCAGTTCTACCAGTTCCAGGGC
ATCGGCGCCATGCGCATCTACGCGCCGGACCCCGAGACGCTCCGGGCCCTCGACGGCACCGGCATCGACCTCATGATGGA
CGTGGGCAACGGCGACCTCGCCGCCCTCGCCTCCGACCCTGCAGCGGCGGCCGGCTGGGTCCGGGATAACGTGCTCGCCT
AC---CCGGGCGTCCGCGTCAAGTACGTCGCGGCCGGCAACGAGGTGGACGGCGGCGACACGCAGAACATCCTCCCGGCC
ATGAAGA------------ACCTCAACGACGCGCTCTCCGCGGCCG----------GCCGCCCTGACGTCAAGGTGTCCA
CGGCGGTCAAGATGAGCGTTCTCGAGTCCTCATCGCCGCCCTCTGACGGCGCGTTCAAGGACGCGTACATGATGGACGTG
GTCCAGCTGCTCAAGACCACCGGCGCGCCGCTCCTCGCCAACGTGTACCCCTACTTCGCAAAAACAGGTGACCC---CGA
CATCGAACTCAGCTACGCGCTCTTCCAGCAGAGCACCACCACGGTGAGCG---A------CAACGGCCTCACCTACACCA
ACCTCTTCGACGCCATGGTCGACGCGGTGTATACGGCCATGGAGAAGGCGGGCGCGTCCGGTGTGCCCATCGTGGTCTCC
GAGAGCGGGTGGCCGTCGGCAGGCGGCGTTGAGGCGACCGTCGCTAACGCGCAGGCGTACAACCAGAACCTGATCAACCA
CATCGG--------------------------------------------------------------------------
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-------------CAATGGCACACCCAAGAGGCCTGGGGCGCTGGAGACGTACATCTTCGCCATGTTTAATGAGAACCAA
AAGGATGGGGACGAGACGGAGAAGAATTTTGGGCTGTTCAATGGCCCCGACAAGTCGCCGGTGTACCCTCTAAGTTTCAG
CAATTAATTAA---AGACACCGATAAGTGCCACACATGTGGCATGAACACATGGAAACTCCGAACGATTTTTATGGCACT
GATAAGGATGCCAATTCTTTTGTGGATGGCAAGTTTCAGTTTTTTTTTTGGGTTCGTATTTTTCTTTTCGGATGACAACT
TTAGTTTAAAAAACGTTAAAGTCGAAGTGCTTCGTTGCACACTATGCTTTGTGTACGACCTTTTTTCATATGGTTTTCAT
ATGACCAGAGAGAGGCCCGTGGACCCGTTTCCCGATGTTTGGGCCACAGCATGAGACCGGTCTGGTCGTACAAAGATCGT
GCTAAATTTGATCATACGCATAGCAGCTCTCTTATCATTTAGGTTAATTAAAGATGAAATGCATATTCATGCCTACATAT
GTTA---------CGATCTCAATATGGTGCAAAATAA-TCATGCAAACACTTATTAACTAGGTAAGATCGGTGATATGAA
TAAGATCCATTATGTTGCATAAAAAATCGATTTCGCTTCCGTACAAAAAT------------------------------
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>chr3A_1021
CTCG----------------------------------------------------------------------------
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--------------------------------------------------------------------------CGCTCG
CCGTGGCGTTGGTCGTCGGAGTCTTGGCGTCCATCCCTATCGGTAAGCCACCAACCTGCAAGCATGCATGTCTCCGCTCA
TCACCAACATCAAACTAATTCTATTTGCACTGTCCACGACGAGC---------------GTGCAGAGGTGGAATCCATCG
GGGTGTGCAACGGGATGATAGGCGACAGCCAGTCCCTGCCATCTCCGGCCGACGTGGTGCAGTTGTACAGGACCAAGGGC
ATCAGCGCCATGCGCATCTACGCCCCGGACCCGGAGACGCTCCAGGCCCTCGGCGACACCGGCATCGACCTCATCATGGA
CGTCGGCAACGGCAACCTTTCCGCCCTCGCCTCCGACGCCGGTTTGGCCGCGTCCTGGGTCCAAGAAAACGTGCTGGCCT
AC---CCGCACGTCAGCATCAAGTATATCGCGGCCGGCAACGAGGTGGAAGGCGGCGACACGCAGAACATCGTCCCGGCC
ATGACGA------------ACCTCAACGCCGCGCTCTCCAAGGCCA----------GCCGCCCTGACGTGAAGGTGTCCA
CGGCGGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCTCCCTCCAGCGGCGTGTTCAAAGACGCGTACATGACGGAGGTG
GCCCAGCTGCTCAAGGACACCAGCGCGCCGCTGCTCGCCAACGTGTACCCCTACATCGCCAAAAGGGACACCCC---GAC
CATCGACCTCAGCTTCGCGCTCTTCCAGCCGAGCACCAACCAGGTGAACG---ACAACGGCAACGGCCTCACCTACACCA
ACCTCTTCGATGCCATGGTCGACGCCATGTACACGGCCATGGAGCAGGCGGGTGCGTCGGACGTGCCCATCGTGGTCTCG
GAGAGCGGGTGGCCGTCGGCCGGCGACGACCTTGCAACCCCCACTAACGCGCAGGCGTACAACCAGAACCTCATCGACCA
CGTCGGCAAAGGCACGCCCAAGAGGGCCGGGCCCCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCGAAAGGACG
GGCCCGACACAGAGAGGAACTTCGGGCTGTTCAACGGCCCCGACAAGACGCCGGTGTACCCTATAAGGTTCACCAATTAG
TTAAGAAGACGTCCGGACTATATTTTCATGTATACATGAGTACATACATATCTCTTATTACGGTAGATCTCAATAAGCTG
CACAATAATACGTACAAGCACGTACTAGTATGTTACTCTACTAGATAATGTCATATGAATAAGATCCATCCATTGTGTTT
TGGAAATAAGGATCGGTTCCTCTCCACTAAAGAAGCGTAGTAAACTTGTGAAGTACAGCGTTTGATTCTAATTATTTTCC
TTAGAAACAAGTAACTTTGCTAATTCTACGTTGACTGATAATTTCTTTCGACGCCATGGAAAAGTCCATA----------
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--------------------------TTTTGTGAGCGCTCAAAAATATTTTACTTGTTTTGCACACATAGGCAAAACAAA
TACTGTGAATGTTGCTTACATCTATATATATGAACAAACATGTAAAGTTGACTGAGAAAAGAGAAATAAGATTATCTTAC
TAGTTGCCTAACAGAACCATA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATAAATAAACATATATAGGTAGTATATATCACAATGGAA
GGATTTTTAAAAAGCCTGTTAA-TTTTTTAGAAAAATCCCAAAAAAATATAATTGATTTAAAAATACAAATTAAACACCA
TATAAAATCTCTAAG--TTTTTTTCTTTCATAATTAAGTATGTCAAATTTAGAAATACCATGCACGCAACTTTTGTGTCC
GCGATCCGTCCGGATGACTGAAATGCAGAATCTTAAGTTTTGATGGAGTAGTATGCAATTTGGCAGGTCTAGAGCAGTTT
TACTTTATAAGTTGAATCCGACAAATACATCTATATGCAATGTGTGTTTTGATATGGTATCATGCTGAACAATTGGTCCC
CCCAGGCACAAATAGCATGTCATCATACATGTAA----CTGTACATCTTCTGAAGCGTATTTTTTCTACACCCTTGCTAT
ATCTTTGACCTAGCTTATTTTAA--TCTGCATCATTCAAATATTTTTGTCCG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTTTGCGGGAGAAGTTCATGAGGATTTCATCATTT
ATTAAG----------GTGTAGGGATTGTGTAGGGAACTAAGCTTTTTTTGTGGTTGTTGTTGCAATCGAC---ATGCAT
GAATTGCGTTGGGCAGTTGGATGGACGTCTTGTACGTACGATCACACCACACACCTGGCTGCTGGGCAGCTATATATGGA
GATGAACCAAACTATTTCAGACTCGCCAGCGATATAAATAGGGAGCGCGCTAGCTCTTGCAATCCATCCATCCGTCCAGT
CCTATATATAGCTGGTGGATTGTCGGTACAGTTGCATGCAAAAGGAGGCCTAGGAGCCGGGGACGTACGTGCGTGCATCG
ACTGTTTCTTCCTCGCACAACAAGCTGGTCGATCGATCGAGCTTCTGAAGATGGCGCGGCAACGTACGGTCGCCATGGCG
CTGGTCGTCGGAGTGATCTTGGCGTCCATCACTATCGGTAATTAATATAAGCCACCAACCAACCTGCATGCATGCATGTC
TCCGTGA-----TGTTCATCACCGGTGACGGTGAGGTGACAGGCCAATTAATCGGTTGCATGTTGGTGTCAAACTACGAA
CTCAC---TGTTGTCCCTGGCGATTGCGCGGGCAGATCAGGTGCAATCCATCGGCGTGTGCAACGGCAAGGTCGGCGACA
ACCTGCCATCGCGGGCCGAGGTGGTGCGGTTCTACAAGTCCCTGGGAATCGGCGCCATGCGCATCTACGAGCCGGAACCC
GAGACGCTCCTGGCTCTCGACGGCACCGAGATCGAACTCATCATGGACGTGGGTGGCGGCTTCGCCGCCATCGCCTCCGA
CCCTGCCGCCGCGGCCGGCTGGATCCGTGACAACGTGCTTGCCTTCCCGGGCGTGCGCATCAAGTACATTGCGGCCGGCA
ACGAGATCGAGGGCAGCGACACGGACAACATCGTCCCGGCCATCAAGAACCTCAACGCCGCGCTCGCTGCGGCCAGCCGC
ACTGACGTCAAGGTGTCCACGGCGGTCAAGATGAGCGTGCTGGGGTCCTCCTCGCCGCCCTCCGAGGGCGCGTTCAAGGA
CCCATACATGACGGAGGTGGCCAAGATGCTCAAGGCCACCGGGGCCCCGCTCCTCGCCAACGTGTACCCCTACTTCGCCA
AAAGGGACACCCCGGACATCGACCTCGGCTTCGCGCTCTTCAAGCAAAGCACCAGCACGGTGAGCGACAGCGGTCTCACC
TACACGAACCTCTTCGACGCCATGGTCGACGCGGTTTACTCGGCCTTGGAGAAGGCGGGTGCGCCGGACGTGCCCATTGT
GGTCTCGGAGAGCGGATGGCCGTCGGCCGGCGACGACCTGGCAACCGTCGCTAACGCGCAGGCGTACAACCAGGGGCTCA
TCGACCACGTCGGCAAAGGCACGCCCAAGAGGCCGGTGCCCCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAG
AAAGGAGGGGCCGTGACAGAGAAGAGCTTTGGGCTGTTCAACGGCCCCGACAAGACGCCGGTGTACCCTATAAAGTTCAA
CAATTAGCTAAGACAGCCGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACTACATATTCATGCATACAATA
CATATATA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr3D_1155
--------------------------------------------------------------------------------
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-----------------------------------------------------------GTGCAGAGGTGGCATCCATCG
GCGTGTGCAACGGGATGATAGGCGACAGCCAGTCCCTGCCGTCGCGGGCCGACGTGGTGCAGCTGTACAGGACCAAGGGC
ATCAGCGCCATGCGCATCTACGCCCCGGACCCCGAGACGCTCCAGGCCCTCGGCGACACCGGCATCGACCTCATCATGGA
CGTCGGCAACGGCAACCTTTCCGCCCTCGCCTCCGACCCCGGCTTGGCGGCGTCCTGGGTCCAGGAAAACGTGCTGGCCT
AC---CCGCGGGTCAGCATCAAGTATATCGCGGCCGGCAACGAGGTGGAAGGCGGCGACACGCAGAACATCGTCCCGGCC
ATGACGA------------ACCTCAACGCCGCGCTCTCCAAGGCCA----------GCCGCCCTGACGTGAAGGTGTCCA
CGGCTGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCTCCCTCCAGCGGCGTGTTCAAAGACGCGTACATGACGGAGGTG
GCCCAGCTGCTCAAGGACACCAGCGCGCCGCTGCTCGCCAACGTGTACCCCTACATCGCCAAAAGGGACACCCC---GAC
CATCGACCTCAGCTTCGCGCTCTTCCAGCCGAGCCCCAACCCGGTGAACG---A------CAACGGCCTCACCTACACCA
ACCTCTTCGACGCCATGGTCGACGCGATGTACACGGCCATGGAGCAGGCGGGCGCGTCGGCCGTGCCCATCGTGGTCTCG
GAGAGCGGGTGGCCGTCGGCCGGCGACGACCTGGCAACCCCCACTAACGCGCAGGCGTACAACCAGAACCTGATCGACCA
CGTCGGCAAAGGTACGCCCAAGAGGGCCGGGCCCCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCGAAAGGACG
GGCCCGAGACAGAGAGGAACTTTGGACTGTTCAACGGACCCGACAAGACGCCGGTGTACCCTATAAACTTCACCAATTAG
TTAAGA---CGGCCGGACTACATATTCATTTATGCAA---TACATACGTAGCTACTACTACGGTC-ATCTCAATAAGTTG
TGAAATAATTCGTGCAAGCACGTACTAGTATTTAATAGATAATGAGAGAC---TATGAATAAGATCCATCCATTGTGTTT
TGGAAATAAGGATCGGTTCCTCTCCGCTAAAGAAGCGTAGTAAACTTGTGAAGTACAGCGTTTGATTCTAATTATTTTCC
TTAGAAACAAGT---TTTGCTAATTCTAAGTTGACTGATAATTTCTTTCGACGCTGAGAACTATCCATCCATGAAAAACT
TCATATTTTGTGAGCAAAAAATGCTAGATCGACGGACAATTACGGGGAATCAACGGACCCTCCCAACCAACTAAACTTGC
CCCCCTGATTTTCAGGGTGGGGTGGGGCCTCTCCCTCCTCCTTAATCCAATTACAGATTGCCAACTAGTTCTCACCCCGT
AATTGTCCGTTAATGTAGCATTGCCGTTTTGTGAGCGCTCAAAAATATTCTATTTGTTTTGCACACATAGGCAAAGCAAA
TATTGTGAATGTTGCTTACATCTATATATATGAACGAATATGTAAAGTTGACTGAGAAAAGAGAAATAAGATTATCTTAC
TAGTTGCCTAAGAGCATCTCCAACAGACGCGCAACGCGCGACTCGTTAAAAAACAGAATACAAGGTCGGGTGAGCCAGCT
TTTGCGCGTGGCGCTGCGCTGGCTCCAGCGGCCGCCGCAAAATAAGCAAGCTCGAGCCGCTCCAGCAGACGTGCTATATT
TCTTCTTTTTTTAACTACAATTTGATACACATTTGGCTCTGATAGTACAAATGTGATAGATAGTTCGTCACATAGCCTCC
TCCTACGATACAAAATAGTGCATAGATAGTTCATAGCCTTCTCCTACAATAGATAGATAAAATGAAAAACTACTACTACT
TGTCATCCTCCGACTCGGACTCTGCCTCGGTGATGTTCTCCTCCGACGTCTGAACGTAGCCGTCAAGGACCCGCTCATCG
TTCGAGTCCCAGGACGACGCTCCTAGTGCGATGTTGAATTTAGCGACCGCCTTCCGTGTTCGCCTGTCCTCGTGATAGGC
GGCTCGCTCCTCCCTCCTCTCCTCCCTCTCCACCCTCCTCTCAGCGTAGAACTGTTGCTCATTGATGACATCTTGCGGGA
AGCGTAGGCGCCACAGCGCCATGGCTTCCTCGTCCATCTCGGCCAAGCTGAGACGGCGCTCCCGCCTCCAGTTCTCGCGA
CGATCCTCGTCGGTGATAAGCCCCGGGGGAGGCGCCAACTCCTGCGCCCGCTCCCGCGTCGCCATGTCCGGTAAGTTCAT
GTCCCAACGGGACCGCCGGAGGCGCCATGCCGCAGCGTCGTACGCGCGGGCGCCCTCCTGGGCGGTGTCGAAGGTTACGA
GGCCGAGGCGCACGTCGCCGGACTGAATCTCGGCGGAGTAGGTGCCGGACGGACGTACGTGGACGCCGCGGTAGCCCGAA
GCTCCCCGGCGGCGCGGCGGCATGGTGGCGCGGTGGTGGCGTGTCGGCGGCGAGGAGAGAAAGCGGTAGAGGGAGCGACG
AGAGAGCGGCAGAGGACGCTGCAATTTTATAGGCGCGTCGGATGCGGTGCGCCAAATCTAGCACGCGAGCTCCCTCTTTC
GCCCGCGCGCGCTAGTTTCCGCCTCCGCTGGAGCGCGCGAAAACGTCCCGGGCGCGTGAAAATGGCATTTTACCGCGCGC
GTGTCTTTTGGCGCGGCTGTTGGAGATGCTCTAACAGAACCATAAATAAACATATATAGGTAGTATAT--CACAATGGAA
ACAGTTTTAAAAATCCTGTTAATTTTTTTAGAAAAATCCCAACAAAAAAGAATTGATTTAAAAATACAAATTAAACACCA
TATAAATATCTCTAAGTTTTTTTTCTTTCATAATTAAGTATGTCAAATTTAGAAATACCATGCACGCAACTTTTGTGTTC
GCGATCCGTCCGGATGACTGAAACGCAGAATCGTAAGTGTTGATGGAGTAGTATGCAATTTGGCAGGTCTAGAGCAGTTT
TACTTTATAAGTTGAATCCAACAAATACATCTATATGCAATGCGTGTTTTGATATCGTATCAGGTTGAACAATTGCCCGC
CCCAGGCACAAATAGCATGTCATCATACATGTACAATTCTGTACATTTTCTGAAGCGTATTTTTTTTACACCCTTGCTAT
ATCTTTGACCTAGCTTATTTTAAATTCTGCATCATCTAAATTTTTTTGACCGTTTGATCGACTCAAACTCTCACACATGA
TTATGGTTTTTTGTGCCACTCTATGGTCTTATGCAATACGTAATAAATAAAGATTGAAAAAAATGCAACATATTTGGTGT
GCAACGTGCACTATAAATTTATTTTCGGTTTATGTACAAATAATATCAATGGTATGAAAAGGTAACCAGAAATGATTTAG
GTTTTATACTCCAGCACAGGATGGCAATCCCCAAAAAAGACATAGGATGGCTCCGTAAAAAAAAAGACATAGGATGGCAA
TGAGGCCACATACCGAGCCAAGTTCATGAGTTATTTTTTTATTTTTTTTGCGGGAGAAGTTCATGAGGATTTCATCAAGT
AAGGAGTGGGGATTGTGTGTGTGGATATTTTACGGAACTAAGTTTTTTATTTGGG----GTTGCAATCGACATGATGCAT
GAATTGCGTTGGGCCGTTGGAA----GTCTTGCACGTACGATCACACCACACACCTGGCTGCTGGGCAGCTATATATGGA
GATGAACCAAACTATTTCAGACTCGCCAGCTATATAAATAGGGCGCGCGCTAGCTCTTGGAATCCATCCATCCATCGAGT
CCTATATATAGGTGGTGGATTGTCGGTCGAGTTGCATGCGAAAGAAGGCCTAGGAGCCGGGTACGTACGTGCGTGCATCA
ACTGTTTCTTCCTCGCATAGCAAGCTGATCGATCGATGGAGCTTCTCAAGATGGCGCGGCAACGTACGGTGGCCATGGCG
TTGGTCGTCGGAG---TCTTGGCGTCCATCACTATCGGTAATTAAGT-----CACCAACCAACCTGCATGCATGCATGTC
TCCGTGCCGTGGTGTCCATCACCGG---CGGTGAGGTGACAGACCAGTTGTTTGCATATATATTGCTGTCAAACTACGAA
CTCACTAGTGTTGTCCCTGGCGATTGCGCGGGCAGATCAGGTGCAATCCATCGGCGTGTGCAACGGCAAGGTAGGCGACA
ACCTGCCATCGCGGGCCGAGGTGGTGCAGCTCTACAAGTCCCTGGGAATCGGCGCGATGCGCATCTACGAGCCGGAACCC
GAGACGCTCCTGGCCCTCGACGGCACCGAGATCGACCTCATCATGGACGTGGGTGGCGGCTTCGCCGCCATCGCCTCCGA
CCCTGACGCCGCGGCCGACTGGGTCCGTGACAACGTGCTTGCCTTCCCGGGCGTCCGCATCAAGTACATTGCGGCCGGCA
ACGAGGTGGAGGGCAGCGACACGGACAGCATCGTCCCGGCCATCAAGAACCTCAACGCCGCGCTCGCCGCGGCCAGCCGC
ACTGACGTCAAGGTGTCCACGGCGGTCAAGATGAGCGTGCTCGGCTCCTCCTCGCCGCCCTCCGAGGGCGCGTTCAAGGA
CGCGTACATGACGGAGGTGGCCAAGATGCTCAAGGCCACCGGAGCCCCGCTCCTCGCCAACGTGTACCCCTACTTCGCCA
AAAGGGACACCCCGGACATCAACCTCGGCTTCGCGCTCTTCCAGCAAAGCCCCAGCACGGTCAGCGACAGCGGTCTCACC
TACACGAACCTCTTCGACGCCATGGTCGACGCGCTTTACTCGGCCTTGGAGAAGGCGGGTGCGCCGGAGGTGCCCATCGT
AGTCTCGGAGAGCGGCTGGCCGTCAGCCGGCGACGACCTGGCAACCGTCGCTAACGCGCAGGCGTACAACCAGGGGCTGA
TCGACCACGTCGGCAAAGGCACGCCCAAGAGGGCGGTGCCGCTGGAGGCGTACATCTTCGCCATGTTCAACGAGAACCAA
AAGGGAGGGGCCGTGACAGAGAAGAACTTTGGGCTGTTCAACGGCCCCGACAAGACGCCGGTGTACCCTATAAAGTTCAA
CAATTAGCTAAGACAACCGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACTACATATTCATG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr3D_1156
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------TGCAGGTGTGCAATCCATCG
GCGTGTGCTACGGCGTGATCGGCAACAA------CCTCCCGTCCCGGAGCGACGTGGTGCAGCTATACAGGTCCAAGGGC
ATCAACGGCATGCGCATCTACTTCGCCGACGGGCAGGCCCTCTCGGCGCTCCGCAACTCCGGCATCGGCCTCATCCTGGA
CATCGGCAACGACCAGCTCGCCAATATCGCATCCAGCACCTCCAACGCGGCGTCCTGGGTCCAGAACAACGTGCGGCCCT
ACTACCCGGCTGTGAACATCAAGTACATCGCCGCCGGCAACGAGGTACAGGGCGGCGCCACGCAGAGCATCGTCCCGGCC
ATGCGGA------------ACCTCAACGCGGCCCTCTCCGCCGCGG----------GCCTGGGCGCGATCAAGGTGTCCA
CCTCGATCCGGTTCGACGCGGTGGCCAACTCCTTCCCGCCCTCCGCCGGCGTGTTCGCGCAGTCGTACATGACGGACGTG
GCCCGGCTCCTGGCGAGCACCGGCGCGCCGCTGCTGGCCAACGTGTACCCCTACTTCGCGTACCGCGACAACCCGCGGGA
CATCAGCCTCAACTACGCGACGTTCCAGCCGGGCACCAGCGTGCGTGACCAGAA------CAACGGGCTGACCTACACAT
CCCTGTTCGACGCGATGGTGGACGCCGTGTACGCGGCGCTGGAGAAGGCCGGCGCGCCGGGCGTGAAGGTGGTGATTTCC
GAGAGCGGGTGGCCGTCGGCGGGCGGGTTCGCGGCGTCGGCGGAC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------AACGCGCGGACGTACAACCAGGGGCTGA
TCAACCACGTCGGCGGCGGCACGCCCAAGAAGCGGGAGGCGCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAG
AAGACCGGGGATCCCACGGAGAGGAGCTTCGGGCTCTTCAAC---CCGGACAAGTCGCCGG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr3A_1156
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------TGCAGGTGTGCAATCCATCG
GCGTGTGCTACGGCGTGATCGGCAACAA------CCTCCCCTCCCGGAGCGACGTGGTGCAGCTCTACAGGTCCAAGGGC
ATCAACGGCATGCGCATCTACTTCGCCGACGGGCAGGCCCTCTCCGCGCTCCGCAACTCCGGCATCGGCCTCATCCTCGA
CATCGGCAACGACCAGCTCTCCAACATCGCCGCCAGCACCTCCAACGCGGCGTCCTGGGTCCAGAACAATGTCCGGCCAT
ACTACCCGGCTGTCAACATCAAGTACATCGCCGCCGGCAACGAGGTGCAGGGTGGCGACACGCAGAGCATCGTCCCGGCC
ATGCGCA------------ACCTCAACGCGGTCCTCTCCGCCGCCG----------GTCTCAGCGCCATCAAGGTGTCCA
CCTCGATCCGGTTCGACGCGGTGGCCAACTCCTTCCCGCCCTCCGCCGGCGTGTTCGCGCAGTCGTACATGACGGACGTG
GCCCGGCTCCTGGCGAGCACCGGCGCGCCGCTGCTCGCCAACGTGTACCCCTACTTCGCGTACCGCGACAACCCGCGGGA
CATCAGCCTGAACTACGCCACGTTCCAGCCGGGCACCACCGTGCGTGACCAGAA------CAACGGGCTGACCTACACAT
CCCTGTTCGACGCGATGGTGGACGCCGTGTACGCGGCGCTGGAGAAGGCCGGCGCGCCGGGCGTGAAGGTGGTGATTTCC
GAGAGCGGGTGGCCGTCGGCTGGCGGGTTCGCGGCGTCGGCGGAC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------AACGCGCGGACGTACAACCAGGGGCTGA
TCAACCACGTCGGCGGGGGCACGCCCAAGAAGCGGCAGGCGCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAG
AAGACCGGGGACGCCACGGAGAGGAGCTTCGGGCTCTTCAAC---CCGGACAAGTCGCCGG-------------------
--------------------------------------------------------------------------------
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>chr3B_1157
--------------------------------------------------------------------------------
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-------------------------------------------------------------GCAGAGGTGGAATCCATCG
GCGTGTGCAACGGGATGCAAGGCGACAGCCAGTCCCTGCCATCGCGGGCCGACGTGGTGCAGTTCTACGGGACCAAGGGC
ATCAGCGCCATGCGCATCTACGCCCCGGACCCCGAGACGCTCCAGGCCCTCGGCGACACCGGCATCGACCTCATCATGGA
CGTGGGCAACGGCAACCTTTCCGCCCTCGCCTCCGACGCCGGCTTGGCGGCGTCCTGGGTCCAAGAAAACGTGCTGGCCT
AC---CCGCGCGTCAGCATCAAGTATATCGCCGCCGGCAACGAGGTGGAAGGCGGCGACACGCAGAACATCGTCCGGGCC
ATGAAGA------------ACCTCAACGCCGCGCTCTCCAAGGCCA----------GCCGCCCTGACGTGAAGGTTTCCA
CGGCGGTCAAGATGAGCGTGCTCGCGTCCTCCTCGCCTCCCTCCAGCGGCGTGTTCAAAGACGCGTATATGTCGGAGGTG
ACCCAGCTGCTCAAGGACACCAGCGCGCCGCTGCTCGCCAACGTGTACCCCTACATCGCCAAAAGGGACACCCC---GAC
CATCGACCTCAGCTTCGCGCTCTTCCAGCCGAACACCAACCCGGTGAACG---ACAACGGCAACGGCCTCACCTACACCA
ACCTCTTCGACGCCATGGTCGACGCTATGTACACGGCCATGGAGCAGGCGGGTGCGTCGGACGTGCCCATCGTGGTCTCG
GAGAGCGGGTGGCCATCCGCCGGCGACGACCTGGCAACCCCCACC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------AACGCGCAGGCGTACAACCAGAACCTGA
TCGACCACGTCGGCAAAGGCACGCCCAAGAGGGCCGGGCCCCTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAA
AAGGGAGGGCTCGAGACTGAGAGGAACTTCGGGTTGTTCAACGGCCCCGATAAGACGCCGGTGTACCCTATAAGGTTTAC
CAATTAGTTAAGACG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr3B_1160
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------GAGGTGCAATCCATCG
GCGTGTGCAACGGCAAGGTAGGCGACAA------CCTACCATCGCGGGCCGAGGTGGTGCGGCTCTACAAGTCCCTGGGA
ATCGCCGGGATGCGCATCTACGAGCCGGAACCCGAGACGCTCCTGGCCCTGGACGGCACCGAGATCGACCTCATCATGGA
CGTGGGT---GGCAGCTTCGCGGCCATAGCCTCCGACCCTGCCGCCGCGGCCGGCTGGATCCGGGACAACGTGCTTGCCT
TC---CCGGGCGTGCGCATCAAGTACATTGTGGCCGGCAACGAGGTCGAGGGCAGCGACACGAGCAACATCCTCCAGGCC
ATGACCA------------ACCTCAACGCCGCGCTCGGTGCCGCCA----------GCCGCACTGACGTCAAGGTGTCCA
CGGCGGTCAAGATGAGCGTGCTCGGGTCCTCCTCGCCGCCCTCCGAGGGCGTGTTCAAGGACGCGTACATGACGGAGGTG
GCCAAGATGCTCAAGGCCACCGGGGCCCCGCTCCTCGCCAACGTGTACCCCTACTTCGCCAAAAGGGACACCCC---GGA
CATCGACCTCAACTTCGCGCTCTTCCAGCAAAGCACCAGCACGGTGAGCG---A------CAGCGGTCTCACCTACACAA
ACCTCTTCGACGCCATGGTCGACGCGATTTACTCGGCCTTGGAGAAGGCGGGTGCGCCGGGCGTGCCCATCGTGGTCTCA
GAGAGCGGCTGGCCATCTGCCGGCGACGACCTGGCAACCA----------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------TCGCTAACGCGCAGGCGTACAACCAGGGGCTGA
TCGACCACGTCGTCAAAGGCACGCCCAAGAGGCCGGTGCCGCTGGGGACCTTCATCTTCGCCATGTTCAACGAGAACCAA
AAGGGAGGGGCCGTGACAGAGAAGAACTTTGGGCTGTTCAACGGCCCTGACAAGACGCCGGTGTACCCTATCAAGTTCAA
CAATTAGCTAAGACAACCGG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACTACATATTCATG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr1B_2392
AAAAAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------CATTTATTTTTTGGGATCGTGTTTCTACCATCGAGATCTAAACGTACA
ATCGATCAGGACTTGCAAAAACGTGGAGTGCATGGACTAAGTTATCTGGTAGCAAACCGTTCAAGAAAAAAAAAATATCG
GGTAGCAATCAAATCCCAAACTTTCTTTAAAAAAACAAATCCCAACTAA---------------------------ATTA
GGCATATGTGCGTTATCTTCATGGCTTCCTCGCATGCATCTCCTTTTCCTCACGCATCTCCTTCTTCCTC--------TA
CTGACACGAGTTAGATCAGGCGGCAGGTCACTTCTCCCAATTGATTTGTATTGCTCCACCCCAAACAAGTTAGGGCGGGC
TTGGCCTCAGCCCTGTGGTGCCATTAGCCCCATCCTTTGCATGACTTTTTTTATCTGGAAAAGCGAGATTGTCAAGCAGA
TGATGACTTGCTGTTCGCCGCCGCCAAGTTCTACCGCCACGATCTCCGGTGCTCGAGGGATGGTGTTACCACTGCAGCCA
GACATTATGTTGCGTTTAAACACAACACCAACGTCAGATTATATGGCTGGTCGTCGAACACGTGGATTCAATGCCCACCG
CTGCCGAAACATGCTGCAGGTCACCGCTGCACCCTTCATCACCACCGCCACAAAGTTCTATTGACACGAGCTCCACTTCT
CAAAGGATGGTGTTGCCGCTGCAAC------------
>SNPs
-----------S----S-------------S------S-S--------------S----SS-------------------
-------------------------------------------S------------------------S-----------
-------S--------S---------------S----------S----S-------------------------------
--------------S----S---S--SS-----------------------------------S---------------S
-S-------S------------------------S-----------------------------------SS---S----
-----S------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------S------SS---S--------S---------S----------------------------------------
-----S---------SS------------S------S---SS----------S-------S---------S----S----
----------------------------S--SSSSS----------SSS----S-S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SS---------S-
--S------------------------------------------------------------------SSSS-------
-------------------------------------------------------S----------------------S-
--------SSSSS-------------S-----------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S----------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------S--------------------------------S-------S------------------
------------------S-------------------------------------------------------------
-------------S--------------------------------------------S---------------------
------------------------------------------------------S-------------------------
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-------------S----------------------------------S-------------------------------
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-----------SSS-----------------------------S------------------------------------
-----S--------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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>forward_391
--------------------------------------------------------------------------------
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---------------------------------------------------AAGTGTGGAAGCCAGGGATG---------
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>reverse_3662
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-------------------------------------------------------------TAAAGGGCGACCCCAACAT
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>forward_396
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--------------------------------------------------------TGGAAGCCAGGGATGTAAGC----
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------------------TCTCTTCCAGCAGAGCACCA------------------------------------------
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>forward_431
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-----------ACTCTGCTGCTTGTGGATCA-------------------------------------------------
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-------------TATGGTCGACGCGGTGTACA-----------------------------------------------
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-----------------------------------------------------AACTTCTTCGAATCCGGCCG-------
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---------------------------------------------------GCGCATCGTCTTCTTCCTGA---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------
