>input_sequence_60920
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------------------ATGGAAGATTTCCATGAAGAGACGCGCGAGGCACGGGACGAGACCTTCAATCCGGTGAGCTC
ACCCTCTCTTCAGTTCCTCCATCGGATGTTCCCTTTTCTCTGTCCTTTTTGTTCTTCCGGATGTTGGATTTTAAGAGCTG
TCGGGACCTGAGCAGGATCTGATCCGCGCGATATTCAAGCTTGTGTGGAGCCGGCGGACCGGCAGGGGCGGCGTCGTCGA
CGAGGCCGTAGACGTCGAGGTGATTCCGTGGTCCAATCTAATCTCAGATGCTTAGCTTTTCTGTTCCCTTCCT-------
---CCTACCCCAAACTGTTCAGTTTCTTTTTTATCCTTTTGCTATGTATGTAT--ATCAGATGAGAATGTTTCAGTTTTT
AATTGGCAGCCTGCTGCGGAGACGTCAAGGAGGAACCGGAGTACCTCTGGTAAATAAATGGTGTTTTCTAG---------
--GATGATAAACAATGCTTTGTTCTTGGAAATTCAGTAGCACTGTCGACTGTCGATTCCGCGTGCACCTGCAAATTAAAC
TGATGGAGTCCTTGGGTCCTTCCTAGTCCGGATTCTCTGTCTTTCCAAGC-----TAGTAGTTGCGTGCACAGTTTTCGT
GCATGTTGCAGCTATCTGTGCCAGTTTTTACCCATACTATGTTTATATTGACACATTTATCATGTTCACTGTTCGATTGT
TTATCAATCCCTTGATCGAAAATGGAAAAAAAATAGCCGAAAACAAATGAATTTCTGCCCTTAGGTTCCTTTGGATAACT
CAAACCTAAGATATCAAAATGATTTCCAACAG-AAGCCTTCCCGCACCTTGTTCATGATGCTTTGTTTGTTTAATGTTTG
CAGCCAATGCAAGTGCACTTCAAGTGAGCTGCGAACTTCTTCGGATGTTTGTCGCAGGTCTGCATATTGACGAAAAATAT
CACACCACCTCATGCTAATAACAAGTAAACAT--TTGGTTCCACTTATGCAGTCAACCTCTGAATTCTGTCTTGCAGAGG
CTGTCCAGCGGTGTGCTGTTATCGCTGAAGCAGAGGGGACGACCACAATTGAGCCCACCCACCTGGAGCGAGTTTTGCCG
CAGCTTCTTCTGGACTTCTAG-----------------------------------------------------------
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>chr2A_1_TraesCS2A01G324100
ATTTAACGTGTCTTCATTTGTGTCTTAATCCGCAAAAAAAA-----GCGC-TGCTAGGATTCGAACCAAGTAGCTCTCCC
GTCAAAGAACG-CCAGTGTAACCACGTGGCCGCCGGGAGGGATCTAGTTACCTTTTAATATTTCAATTTATTATTCGTTC
TCCTCCCATTTTTT-TGTTCTCTTTTTTTCTTTGTCTTGGTCCGATGAATTGGTTCGCAAGTACATGAACGTTTTATTCA
AATTGATGAACTTTTT-T-AAAATTCATAAAATTTTTAAAAAATTTGATGAAC-TTTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATTAACTATTTTTGAATTTCGATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TTTCAAAATCGGTGAATTTTTTGAAA-------------
-----AAATTGATGAACTTTTTTCAAAATCAGTGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATTTGTGAACTT-
TTTCTCCAGATTCGTGAACTATTTTTTCAAACG-ATGAACCTATTTCAAAATTGATAGAATTTTTTCTCAAAATTGTGAA
CATTTTTTCAAAACCGATTATTTTGTTTCAAAACAAATGAACTGTTTTGTAATTTATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--A-ATTAAAAATCAAAGCGCTACAG--TGG-------------------TGTACTCAAAGTCTTTT-GCCTGT
ATTTGGTCAGT--TGCAAAGAAGCTCAGGTGGTTAG-CATTCTTGTTCCCTGTTCTAACGCCGAGAGTTCCATACTTGCT
GAGAACGAATTTAGGGTGT-GTTTTT-----T---TTTTGATTTTTTCGCGCCCCTG--------TAGATTGTTGCTGGG
CCAGCCCAGTCGGATCGGCTTCGGGCGCCGATACGAGAAACCGGCGCTGAGAGCGCCGGTTAGGAGCTCCCCTAACTTTT
TCTCAAAAAATAATTAAAAAAAAGGAGCTCCCCTAACTCGCCCCCTTCATCCCGCCCACCCTCCTGCATCTGCCGCCCCG
GCGAAACCGCAAGTCGCCATGGAAGATTTCCATGAAGAGACGCGCGAGGCACGGGACGAGACCTTCAATCCGGTGAGCTC
ACCCTCTCTTCAGTTCCTCCATCGGATGTTCCCTTTTCTCTGTCCTTTTTGTTCTTCCGGATGTTGGATTTTAAGAGCTG
TCGGGACCTGAGCAGGATCTGATCCGCGCGATATTCAAGCTTGTGTGGAGCCGGCGGACCGGCAGGGGCGGCGTCGTCGA
CGAGGCCGTAGACGTCGAGGTGATTCCGTGGTCCAATCTAATCTCAGATGCTTAGCTTTTCTGTTCCCTTCCT-------
---CCTACCCCAAACTGTTCAGTTTCTTTTTTATCCTTTTGCTATGTATGTAT--ATCAGATGAGAATGTTTCAGTTTTT
AATTGGCAGCCTGCTGCGGAGACGTCAAGGAGGAACCGGAGTACCTCTGGTAAATAAATGGTGTTTTCTAG---------
--GATGATAAACAATGCTTTGTTCTTGGAAATTCAGTAGCACTGTCGACTGTCGATTCCGCGTGCACCTGCAAATTAAAC
TGATGGAGTCCTTGGGTCCTTCCTAGTCCGGATTCTCTGTCTTTCCAAGC-----TAGTAGTTGCGTGCACAGTTTTCGT
GCATGTTGCAGCTATCTGTGCCAGTTTTTACCCATACTATGTTTATATTGACACATTTATCATGTTCACTGTTCGATTGT
TTATCAATCCCTTGATCGAAAATGGAAAAAAAATAGCCGAAAACAAATGAATTTCTGCCCTTAGGTTCCTTTGGATAACT
CAAACCTAAGATATCAAAATGATTTCCAACAG-AAGCCTTCCCGCACCTTGTTCATGATGCTTTGTTTGTTTAATGTTTG
CAGCCAATGCAAGTGCACTTCAAGTGAGCTGCGAACTTCTTCGGATGTTTGTCGCAGGTCTGCATATTGACGAAAAATAT
CACACCACCTCATGCTAATAACAAGTAAACAT--TTGGTTCCACTTATGCAGTCAACCTCTGAATTCTGTCTTGCAGAGG
CTGTCCAGCGGTGTGCTGTTATCGCTGAAGCAGAGGGGACGACCACAATTGAGCCCACCCACCTGGAGCGAGTTTTGCCG
CAGCTTCTTCTGGACTTCTAGCTAGCCTTCTTGGTACGGTGGTACCTGTCCCGGACACAGATGGATAGCCAAGGCGCCTG
AAGCAATCCATAGTTAATCTTGTAATGAGAATGTTGTTTCTGTCACCCTGACAAACCAGTTCAGTTAAATATAACACTGC
CGCCCTGATTCACAAGTCAGTAAATTGGGGTTTTGTTCCACAAGTCTGCAGCCAATT-CGTGCAAT--------------
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--------------------TTCCCGTGGAATTTTACTGTCCTTGG-AAAATCCTCCGCGCTGGGGGTAGCAGAGCACGC
GCTACGTGTGAGTGTGACTGGCCTGTGAAAA-AAAGGCGTGGTGGTCTCTGCAGTGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCGAAGAAATCTCAAACGGGC-TGCATAGCACAAAGCTTCAAATATGCTCGCCCCACATCATCTCTTGGATTAGCT
GGATGTTTTCAAATTTGTGGACGTAGACACGTAGTGTTGGATCCCGATGCAAAAATTCAATCCCTCAAAATAGGGCTTCA
TTTGTTTGATGGCCTTATTGTTGCGGCATCGAAGAATGTGGTCCGTGTTGCTCAAATTCCAGTAACAACAGAGGAGGCTG
AACATGTATTGCTTCTGTTTGTGTTGGTTCGTCAACTTTACATTCAACTGAATCGCCTCACTTTTTCTTTTTGAAAAATA
CATAAATTGTTTTCCCTCAAGAATTGTATTCACCGTTTTTCTGTGAAGGACA-TTTTCTATTCAGCACAAAATCCATGAC
CTAATTAGAATTTTCCCCAACT------------GCAGAATCAAAATACTCTAAATTTCCACAATTTGTAGAGGGGGGAG
ACAGAGAGAGACAGCGAGAGCAATTTGCTCACCAGCTCACTTCGGCACTGCGCGCGGCGCCGGTGTTGCCTGATTCTGTT
TGCATCCGTGCGGCAGCAATGAGAAGTCAGGACTCAGCAGGTAGGAACGGAGATGTCTCTGACCAGCAATAACCAATCCC
TAGCCGTTCGCCCGCCAGCGGC-AACCTCCACG
>chr3A_1
ATCTAACGTGTCTTCGTTTGTGTCTTAATCCGCAAGAAAAAAAAAGGCGC-TGCTAGGATTCGAACCAAGTACCTCTCCC
GTCAAAGAACG-CCAGTGTAACCACGCGGCCGCCGGGAGGGATCTGGTTGCCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCTCATTTTTT-CGTTCTCTTTTTTTCTTTGTCTTGGTCCGATGAGTTGGTTCGCAAGTACATGAACGTTTTGTTCA
AATCGATGAACTTTTTTAAAAAATTCATAAACTTTTTTAAAATTTTGATGAAG-TTATTTTAAATTCGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCGATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TTTCAAAATCGATGAACTTTTTTTCA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCATGAACTATTATTTCAAACG-ATGAACCTATTTCAGAATCGGTAAAATTTCTTCTCAAAATCGTGAA
C-TTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAACTGTTCTGTAATTCATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--A-ATTAAAAATCAAAGCGCTACAG--TAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGCTCAGTAGCGCAAAGAATCTCAGGTGGTTAG-CATTCTTGTTCGCTGTTCTAACGGCGAGAGTTTGATACTTGTT
GAGAACGAATTTCAG-GGTCTTT-------ATTTG----CTTTTTTCGCGCTACCCCTGTACCAATAGATTGTTGCTGGG
CCGGCCCAGTCTGATCGGCTTCGGGCGCCGATACGAGAAACCGGCGCTGAGAGCGCCGGTTAGGAGCTCCC---------
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>chr7D_1
ATCTAACGTGTCTTCGTTTGTGTCTTAATCCGCAAAAAAAA-----GTTGTTGCTAGGATTCGAACCTAGTACCTCCCCC
GTCAAAGAACG-CCAGTGTAACTACCCTGCCGCCGACAGGGATCTAGTTACATTATAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-CGTTCTCTTTTTTTCTTTGTCTTGGTCTGATGAATTGGTTCGCAAGTACATGAACTTTTT-----
---------------T-T-AAAATTCATAAAC------------------------TTTTTAAATTTGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCGATGAACTTTTTCCAATGTTGATGAAC-ATTTT------------------
-----------------------------------------TTTCAAAATCAATGAACTTTTTAAAATTCTTGAACTGTT
TTTCAAAATTGAAGAA-CTTTTTCAAAATCGATGAACCTTTTTTGAAATTTGATGAAATTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCGTGAACTATTTTTTCAAACG-ATGAACCTATTTCAAAATCGATAGAATTTTTTCTCAAAATCGTGAA
CGTTTTTTCAAAATCGATTAATTTGTTTCAAAA-AAATGAACTGTTCTGTAATTCATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--A-A--AAAATTTAAAGCGCTAGAG--TAG-------------------TGTACTTAAAGACCTTT-GCCTGT
ATATGGTTAATAGCGCGAAGAAGCTCGGGTGGTTAG-CATTCTTGTTCGCTGTTCTAACGGTGAGAGTTCAATACTTGCT
GAGAACGAATTTCAGTTTGGTTT-------TTTTG----CTTTTTTCGCGCTACCCCTGTACCAATGGATTGTTGCTGGG
CCGGCCCAGTCGTATCGGCTTCGGGCACCGATACGAGAAACCGGCGCTGACAGCGCCGGTTAGGAGCTCCC---------
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>chr2A_4
---TAACTTGTCTTCGTTTGTGTCTTAATCCGCAA---AAAGAAAGGCGC-TGCTACGATTCAAACCAAGTACCGCTCCT
GTGAAAGAACG-CCAGTGTAACCACGCGGCCGCCGGGAGGGATCTAGTTACCTTTTAATATTTCCATCTATTATTCATTC
TCCTCCCATTTTTTTCGTTCTTTTTTTGTCTTTGTCTTGGTCCCATGAATTGGTTCGCAAGTACATGAACGTTTTG-TCA
AATCGATGAACTTTTTTT-AAAATTCATAAACTTTTTTAAAATTTTGATGAACTTTTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATGGACTATTTTTGAATTTCGATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TT-TAAAATCGATGAACTTTTTTTAA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACATTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCGTGAACTATTTTTTCAAACG-ATGAACCTATTTCAAAATCGATAGAATTTTTTCTCAAAATCGTGAA
TGTTTTTTCAAAATCGATTAATTTGTTTCGAAACAAATGAACTGTTCTGTAATTTATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--A-ATTAAAAATCAAAGCGCTACAG--TAG-------------------TGTACTTAAAGTCCTTTTGCCTGC
ATTTGGTCAGTAGCACAACGAAGCTCAGGTGGTTAG-CATTCTTGTTCGTTGTTCTAACGGCGAGAGTTCGATACTTGCT
GACACCGAATTTCTT-TTTGTTT-------TTGTG----CTTTTTTTCACGCCCCTG--------TAGATTGTTGCTGGG
CCGGCCCAGTCGGACCGGGTTCGGGCGCCGATACGAGA------------------------------------------
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>chr1A_4
---TAACGTGTCTTCATTTGTG-CTTAATCCGCA------AAAAAGGCGC-TGCTAGGATTCAAACCAAGTACCTCTCCC
GTCAAAGAACGCCCAGTGTAACCACACGGCCGCCGGGAGGGATCTAGTTACCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-CGTTCTCTTTTCTTCTTTGTCTTGGTCCGATGAATTGGTTCGCAAGTACATGAACGTTTTGTTCA
AATCGATGAACTTTTTTT-AAAATTCATAAACTTTTTTAAAATTTTGAT-AAC-TTTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCAATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TT-CAAAATCGATGAACTTTTTTT-A-------------
-----AAATTGATGAACTTTATTCAAAATCAATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TT-CTCCAGATTCGTGAACTATTTTTTCAAATG-GTGAACCTATTTCAAAATTGATAGAATTTTTTCTCAAAATCATGAA
CGTTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAACTGTTCTGTAATTTATGGACTTTTTCCCAAATGTTTTG-
-AAAAATAA-AATAAAAATCAAAGCGCCATAG--TAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGGTCAG------------------GTGGTTAG-CATTCTTGTTCGCTGTTCTAACGCCGAGAGTTCGATACTTGCT
GAGAACAAGTTTAGGTTGT-TTTTTTTTTCTT---TTTTGCTTTTCTCGCGCCCCTG--------TAGATTGTTGCTGGG
CCGGCCCAGTCGGATCGGCTTCAGGCGCCGATACGAGAAAACGGCGCTGAGAGCGCCGGTTAGGAGCTCCC---------
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>chr6A_4
---TAACATGTCTTCGTTTGTGTCTTAATCCGCAA---AAA--AAGGCGC-TGCTAGGATTCGAACCAAGTACCTCTACC
GTCAAAGAACA-CAAGTGCAACCACGCAGCCACCGGGAGGGATCTAGTTACCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-CGTTCTCTTTTTTTCTTTGTCTTGGTCCGATGAATTGGTTCGCAAGTAGATGAACGTTTTGTTCA
AATTGATGAACTTTTTCT-AAAATTCATAATTTTTTTAAATTTTTTGATGAAC--TTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCGATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TT-CAAAATCGATGAACTTTAA-AAA-------------
-----AAATTGATGAACCTTTTTCAAAATCGACGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTTGTGAACTATTTTTTCAAACG-ATGAACCTATTTCAAAATCGATAGATTTTTTTCTCAAAATCGTGAA
CGTTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAACTGTTCCGTAATTTATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--ACAATAAAAATCAAAACGCTACAGTATAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGGTCAGTAGTGCAAAGAAGCTCAGGTGGTTAG-CATTCTTGTTCGCTATTCTAA----------------------
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>chr2A_6
-----ACGTGTCTTCATTTGTGTCTTAATCCACAA---AAA--AAGGTGC-TACTAGGATTCGAACCAAGTACCTCTCCC
GTCAAAGAACGCC-AGTGTAACCACGCGGCCGCCGGAAGGGATCTAGTTACCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-TGTTCTCTTTTCTTCTTTGTCTT-GTCCGATGAATTGGTTCACAAGTACATGAACGTTTTGTTCA
AATCG-TGAACTTTTTTTTGAAATTCATAAACTTTTTTAAAATTTTAATGAACTTTTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATGAACTATTTTCAAATTTCGATGAACTTTTTTCAATGTCGATGAAC-TTTTT------------------
-----------------------------------------TT-CAAAATCGATGAACTTTTTTTAA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCGTGAACTGTTTTTTCAAATG-ATGAACCTATTTCAAAATCTATAGAATTTCTTCTTAAAATGGTGAA
TGTTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAACTGTTCTATAATTTATGAACCTTTTCCCAAATGTTTTG-
-AAAAA--A--TTAAAAATCAAAGCGCTACAG--TAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGGTCGATAGCGCAAAGGAGCTCAGGTGGTTAG-CATTCTTGTTCGCTGTTCTAACGC--AGAGTTCAATACTTGCT
GAGAACGAATTTAGGGTGT-TTT-------TT---TTTTGCTTTTTTCGCGCCCCTG--------TAGATTGTTGCTGGG
CCGGCCCAGTCGGATCGGCTTCGGGCGCCGATACGAGAAACCGGCGCTGAGAGCGCCGGTTAGGAGCTCCC---------
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>chr1A_30
CCGCCAA--------------------------AA---AAA--AGGGCAC-TGCTAGGATTCGAACCAAGTACCTCTCCA
GTCAAAGAACACC-AGTGTAACCACGCGGCCGCCGGGAGGGATCAAGTTACCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-TGTTCTCTTTTCTTCTTTGTCTTG-TCCGATGAATTGGTTCGCAAGTACATGAACGTTTTGTTCA
AATCG-TGAACTTTTTTT-GAAATTCATAAACTTTTTTAAAAATTTGATGAAC-TTTTTTTAAATTCGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCGATGAACTTTTTTCAATGTTGATGATTTTTTTT------------------
-----------------------------------------TT-CAAAATCGATGAACTTTTTTTAA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCGTGAACTGTTTTTTCAAATG-ATGAACCTATTTCAAAATCGATAGAATTTCTTCTCAAAATGGTGAA
CATTTTTTTAAAATCGATTAATTTGTTTTAAAACAAATGAACTGTTCTGTAATTTATGAACTTTTTCCCAAATGTTTTGG
AAAAAA--A--TTAAAAATCAAAGCGCTACAG--TAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGGTCAGTAGCGCAAAGGAGCTCAGGTGGTTAC-CATTCTCGTTCGTTGTTCTAACGC--AGAGTTTGATACTTGCT
GAGAATGAATTTAGGGTGT-TTT-------TTTTTTTTTGCTTTTTTCACGCCCCTG--------TAGATTGTTGCTGGG
CCGGCCCAGTCGGATTGGCTTCGGGCGCCGATACGAGAAACCGGCGCTGAGAGCGCCGGTTAGGAGCTCCC---------
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>chr2A_33
CA----A--------------------------AA---AAA--TAGGCGC-TGCTAGGATTCGAGCCAAGTACCTCTACC
GTCAAAGAACACC-AGTGTAACCACGGGGCCGCCGGGAGGGATCTAGTTACCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTT-CGTTCTCTTTTTTTCTTTGTCTTGGTCCGATGAATTGGTTCGCAAGTACATGAACGTTTTGTTCA
AATCGATGAACTTTTTCT-AAAATTCATAAACTTTTTTAAAAAATTTATGAAC-TTTTTAAAAATTCGATGAACTATTTT
TCAAATTGGATGAACTATTTTCGAATTTCGATGAACTTTTTTCAATGTTGATGAAC-TTTTT------------------
-----------------------------------------T----------------------AAA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCGTGAACTATTTTTTCAAACG-ATGAACCTATTTCAAAATTGATAGATTTTTTTCTCAAAATCGTGAA
CGTTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAATTGTTCTGTAATTTATGAACTTTTTCCCAAATGTTTC-G
AAAAAA--A--TTAAAAATCAAAGCGCTACAG--TAG-------------------TGTACTTAAAGTCCTTT-GCCTGT
ATTTGGTCAGCAGTGCAAAGAAGCTCAGGTGGTTAG-CATTCTTGTTTGCTGTTCTAACGTCGAGAGTTCGATACTTGCT
GAGAACGAATTTAGGGTGT-TTT-------T-----TTTGCTTTTTTCGCGCCCTTG--------TAGATTGTTGCTGGG
CCGGCCCAGTC---------------------------------------------------------------------
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>chr7A_87
--------------------------------------------------------------------------------
-------------CAGTGTAACCACGCGGCCGCCGGGAAGGATCTAGTTATCTTTTAATATTTCCATCTATTATTCGTTC
TCCTCCCATTTTTTTTGTTCTCTTTTCTTCTTTGTCTTG-TCTGCTGAATTGGTTCGCAAGTACATGAACATTTTGTTCA
AATCG-TGAAC-TTTTTT-GAAATTTATAAACTTTTTAAAAAATTTGATGAAC-TTTTTTTAAATTTGATGAACTATTTT
TCAAATTTGATGAACTATTTTCGAATTTCAATGAACTTTTTTCAATGTTGATGAAT-TTTTT------------------
---TCAAAATCGATGAACTTTTT------------------T----------------------AAA-------------
-----AAATTGATGAACTTTTTTCAAAATCGATGAACCTTTTTTGAATTTTGATGAACGTTTTTCAAATCTGTGAACTT-
TTTCTCCAGATTCATGAACTGCTTTTTCAAATG-ATGAACCTATTTCAAAATCGATAGAGTTTCTTCTCAAAATGGTGAA
CATTTTTTCAAAATCGATTAATTTGTTTCAAAACAAATGAACTGTTCTGTAATTTATGAACTTTTTCCCAAATGTTTTG-
-AAAAA--A-ATTAAAAATCAAAGTGCTACAG--TAG-------------------TGTACTTAAAGTCCTTT-GCATGT
ATTTGGTCAGTAGCGCAAAGGAGCTCAGGTGGTTAG-CATTCTTATTCGTTGTTCTAACGC--AGAGTTCGATACTTGCT
GAGAATGAATTTAGGGTGT-TTT-------TTTTG----GCTTTTTTCGCGCCCCTG--------TAGATTGTTGCTGGG
CCGGCCCAGTCGGATCGGCTTCGGGCGCCGATACGAGAAACCGACGCTGAGAGCGCCGGCTAGGAGCTCCCCT-------
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>chr2A_217
--------------------------------------------------------------------------------
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----------------------------------------------------------------ATGAACTATTTTTCAA
ATTTGATGAACTTTTT-T-TGAATT----------------------------------------TCGATGAACT-----
-----------------TTTTCCAATTTCGATGAACTTATTTCAAATTTGATGAAC-TTTTTCCACTTTTTTGTGAACTT
TTTTCAAAATCGATCAACTTTTTTCAAATGCATGAACTGTTTTTCAAAATTGATGAACTTTTT-T-A-------------
-----AAATTGGTGAACTTTTTTCAGAATCGATGAACCATTTTTGAAATTTGATGAACTTTATTCAAATATGTGAACTTT
TTTCTCAAGATTTGTGAACTTTTTTTTGAAATGGATGAACCTTTTTCAAAATCGCTAGACATTTTTCTCAAAATCGAGAA
CTTTTTTTCAAAATTGATTA-TTTTTTTCAAAACAAATGAACTTTTCTGTTATTCGTGAACCTTTTCCAAAATTT-----
---------------AAATCAAAGTGCTACAG--TAAACGTTTGCGGGGGTACAAATGTACTTAGAAAGTTGT-CCCTGT
AGTTGGTCTGTTAAGCGTGGTAGGTCAGGTGGTTAGTCTTACTGGTTTGGTGTTGTCACGGCGTGAGTTCGACCCTTGCC
GAAGACCATTTTTGCGCTG-TCT-------TTTTG----GCGTTTCGTT--------TGTAGCGATTGAATCTTGCTGGG
CCGGCCCAGTCGAATCGCCTTCGGGCGCCAGTACGAG-AACCGGCGCTGAGAGCGCCGGTTAGGAGCTCCC---------
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>chr2B_933
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------------------------------CCCTAACTCGTTTCCCTCGTCCCGCCCACTCTCCTGCATCTGCCGCCCCG
GCGAAACCGCA-------ATGGAAGATTTCCATGAAGAGACGCGCGAGGCACGCGACGAGACCTTCAATCCGGTGAGCCC
ACCCTCTCTTCTGTTCCTCCGTCGGTTGTGCCCTTTTCTCTGGCCTTTTTGTTCTTCCGGATGTTGGATTTTAAGAGTTG
CCGGGGCCTGAGCAGGATCTGATCCGCGCGATATTCAAGCTTGTGTGGAGCCGGCGGACCGACAGGGGCGTCGTCGTCGA
CGAGGCCATAGACATCGAGGTGATTCGGCGGTCCAATCTAATCTCAGATGCTTCACTTTTCTTT-CCCTTCCTCCTATCC
CAGCCCACCCAAAACTGTTCTGTTTCTTTTTTCG--TTTTGCTATGTACTCCTACATCAGATGAGAATGTTTCAGTTTTT
AATTGGCAGCCTGCTGCGGAGACGTCAAGGAGGAACCGGAGTACCTCTGGTAGG----TGGTGTTTTGTTCCATCTTTAT
AAGATGATGAACAAGGCTTTGTTCTTGGAAGTTCAGTAGCAC-------TGTCCATTCTAAGTGCACCTGCAAATTAAAC
TGATGGAATCCTTCGATCCTTCCTAGTCCGGTTTCTCTGTCTTTCCAAGC-----TAGT---TGCGTGCACAGTTTTCGT
GCATTTTGCAGCTATCTGTGCCAGTTTTTACCCATACTATGTTCATATTGACGC--TTATCATGTTCACTGTTCGATTAT
TCATCAACCCCTTGATCGGAAAAGGG--AAAAAAGGCCGAAAACAAATGAATTTCTGCCGG-----------------CT
CAAACAAATAGTATAAAATG----------AG-AAGCCTTCGTGCACGATGCTCATGATGCTTTGTTTGTTTAATTTGTG
CAGCTAATGCAAGTGCCCTGCAAGTGAGCTGTGAACTTCTTCGGATGTTTGTCGCAGGTCTGTATATTGACGAAAAATAT
CGCAGTACCTGATGCTAATAATAGTACGGTAACATAGATTCCAGTTCTGCAGCTCAAGTCTGAATTCTTTCTTGCAGAGG
CTGTCCAGCGCTGTGCTGTTATCGCTGAAGCAGAGGGGACGACCACAATTGAGCCCACCCACCTGGAGCGAGTCTTGCCA
CAGCTTCTTCTGGACTTCTAGCTAGCCTTCTTGG--------TACCTGTCTCGGACACAGATGGATAGCCAAGGCGCCTG
AACCGATCCATAATTAATCTTGTAATGAGAATGTTGTTTGTGTCACCCTAACAAACCAGTTTTGTTAAATA--ACAC-GC
CGCCCTGATTCACAAGTCTGTAAACTGGGGTTTCGTTC--------------CAATTTCGTACTTCCCCCGTCTGAAAAT
ACTTGTCGGACAAATGCACAAAAATAAATATATCTAGAAATATAATACGTCTAGATACATCCATTTTTCCTACAAGTATT
TTCGGACGGAGGGAGTACAATTTTCCCTGGATTTTACTGTCCTTGTAAAAATCCTCCGCGCTGGGGGTAGCAGAGCACGC
GCTACGT------GTGACTGGCCTGTGAAAG-AAAAGAGTGGTGGTCTCTG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------
>chr2D_944
CCCCT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------CATCCCGCCCACCCTCCTGCATCTGCCGCTCCG
GCGAAACCGCAAGTCGCCATGGAAGATTTCCATGAAGAGACGCGCGAGGCACGCGACGAGACCTTCAATCCGGTGAGCTC
GCCCTCTCTTCAATTACTCCATCGGATGTGCCCTTTTCTCTGGCCTTTTTGTTCTTCCGGATATTGGATTTTAAGAGCCG
TCGGGGCCTGAGCAGGATCTGATCCGCGCGATATTCAAGCTTGTGTGGAGCCGGCGGACCGATAGGGGCGGCCCCGTCGA
CGAGGCCGTAGACATCGAGGTGAATCCGTGGCCCAATCTAATCTCAGATGCTTATCTTGCCTGT-CCCTCT----TACCC
CAACCCACCCAAAACTGTCCTGTTTCAAGCATTC--------------------CATCAGATGAGAATGTTTCAGTTTTT
AATTG-CAGCCTGCTGCGGAGACGTCAAGGAGGAACCGGAGTACCTCTGGTAAATAAATGTTGTTTTCTAC---------
--GATGATAAACAATGCTTTGTTCTTGGAAGTTCAGTGGCACTGTGGACTGTCGATTCCGCGTGCACCTGCAAATTAAAC
TGATGGAGTCCTTCGGTCCTTCCTAGTCCGGTTTCTCTGTCTTTCAAGCTAGTAGTAGT---TGCGTGCACAGTTTTCAT
GCATGTTGCAGCTATCTGTGCCAGTTTTTACCCATACTATGTTTATATTGACACATTTATCATGTTCACTGTTCGATTGT
TTATCAACCCCTTGATCGAAAATGGA--AAAAATAGCCGAAAACAAATGAATTTCTGCCCTTAGGTTCCTTTGGATAACT
CAAACCAAAGATATCAAAATGATTTCCAACATAAAGCTTTCCTGCACCTTGTTCATGATGCTTAGTTTGTTTAATTTGCG
CAGCTAATGCAAGTGCACTGCAAGTGAGCTGCGAACTTCTTCGGATGTTTGTCGCAGGTCTGTATATTGACGAAAAATAT
CACACCAGCTCATGCTAATAACAAGTAA-CAT--TTGGTTCCACTTATGCAGTTAACCTATGAATTCTATCTTGCAGAGG
CTGTCCAGCGCTGTGCTGTTATCGCTGAAGCAGAGGGGGCGACCACAATTGAGCCCACCCACCTGGAGCGAGTCTTGCCA
CAGCTTCTTCTGGACTTCTAGCTAGCCTTCTTGG--------TACCTGTCTCGGACACAGATGGATAGACAAGGCGCCTG
AAGCAATCCATAATTAATCTTGTAACGAGAATGTTGTTTGTGTCACCCTAACAAACCAGTTCAGTTAAATA--ACACTGC
CGCCCTGATTCACAAGTCTGTAAACTGGGGTTTTGTTCCCCAAGTCTGCAGCCAATTTCGTACAAT--------------
--------------------------------------------------------------------------------
--------------------TTTCCCGTGGATTTTACTGGCCTTTT-AAAATCCTCCGCGCTGGGGGTAGCAGAGCACGC
GCGACGT------GTGACTGGCCCGTGAAAGAAAAAGAGTGGTGGTCTCTG-----------------------------
--------------------------------------------------------------------------------
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---------------------------------
>chr5A_2406
--------------------------------------------------------------------------------
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---------------------------------------------------CAGTGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCGAAGAAATCTCAAACGGGC-TGCATAGCACAAAGCTTCAAATATGCTCGCCCCAAGTCATCTCTTGGATTACCT
GGATATTGTCAAATTTGTGGACGTAGACACGTAGTGTTGGACCCCGCTGCAAAAATTCAATCCCTCAAAGTAGGACTTCA
TTTGTCTGATGGCCTTATTGTTGCGGCATCGAAGGATGTGGTCCGTGTTGCTCAAATTCCAGCAACAACAGAGGAGGCTG
AACATGTATTGCTTCTGTTTGTGTTGGTTCGTCAACTTTACATTCAACTGAATCGCCTCACTTTTTTTTTTTGAAAAATA
CATAAATTGTTTTCCCTCAAGAATTGTATTCACCGTTTTTCTGTGAAGGACA-TTTTCTATTCAGCACAAAATCCATGAC
CTAATTAGAATTTTCCCCAACTAAAAAAGAAAATGCAGAATCAAAATACTCTAAATTTCCACAGTTTGTAGAGGGGGGAG
ACAGAGAGAGCCAGCGAGAGCAATTTGTTCACCAGCTCACTTCGGCACTGCGCGCGGCGCCGGTGTTGCCTGATTCTGTT
TGCGTCCGTGCGGCAGCAATGAGAAGTCGGGACTCAG-------------------------------------------
---------------------------------
>chr6B_2406
--------------------------------------------------------------------------------
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---------------------------------------------------CAGTGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCGAAGAAATCTCAAACGGGC-TGCATAGCACAAAGCTTCAAATATGCTTGCCCCACATCATCTCTTGGATTAGCT
CGATATTGTCAAATTTGTGGACGTAGACACGTAGTGTTGGATCCCACTGCAAAAATTCAATCCCTCAAAATAGGACTTCA
TTTGTTTGATGGCCTTATTGTTGCGGCATCGAAGGATGTGGTCCGTGTTGCTCAAATTCCAGCAACAACCGAGGAGGCTG
AACATGTATTGCTTCTGTTTGTGTTGGTTCGTCAACTTTACATTCAACTAAATCGCCTCACTTTTTTAA---AAAAAATA
CATAAATTGTTTTCCCTCAAGAATTGTATTCACCGTTTTTCTGTGCAGGACA-TTTTCTATTCAGCACAAAATCCATGAC
CTAATTAGAATTTTCCCCAACTAAGAAAGAAAATGCAGAATCAAAATACTTTAAATTTCCACAATTTGTAGAGTGGGGAG
ACAGAGAGAGCCAGCGAGAGCAATTTGCTCACCAGCTCACTTCGGCATTGCGC------------------GATTCTGTT
TGCGTCCGTGCGGCAGCAATGAGAAGTCAGGACTCAGCAGGTAGGAGCGGAGATGTCTCTGACCAGCAATAACCAATCCC
TAGCCGTTCCCCCGCCAGCGGCCAACCTCCACG
>chr7D_2406
--------------------------------------------------------------------------------
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---------------------------------------------------CAGTGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCAAAGAAATCTCAAACGGGGTTGCATAGCACCAAGCTTCAAATATTCTCGCCGCACAT-ATCTCTTTGATTAGGT
GGATATTGCCAAATTTGTGGACGT--------AGTGCTGGATCCTGCTGCAAGAATTCAATCCCTTGAAATAGGACTTCA
ATAGTTTGCTGGCCTTATTGTTGCAACATCGAAGGATTT-GTCCTTCTTGCTCAAATCCCAGCAACATTAGAGGAGGCTG
AACATGTATTTTGTTTGTTTGTGTGGGTTCGTCAGCTTTACATTCAACTGAATCACCTCTCTTTGTTTA---AAAAAATG
CATCAATTGTTTTCCCCACAAGCATCACTACTTCC---TTCTGTAAAAGACA-TTTTCTATTAAGCTCAAAATCCATGAT
CTAATTAGACTTTTTCCCAACTAAGAAATAAAATGCAAAACCAAAATACTCGAAATTTCCATAATTACT-----------
----------ACAGCGAGGGTAGTTTGCTCACCAGCTCTGTTTGGCACTGCGCGCGGTGTCGGTGTTGCCTGATTTTGTC
TACATCTATGCGGCGAC----AGAGGTCAGGACTCAGCAGGCAGGAGTGGAGATGTCTCTCACCAACAGTAACCAATCCC
TAGCCGTCCGCCAGC----GGCCAAACTCCA--
>chr6D_2406
--------------------------------------------------------------------------------
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---------------------------------------------------CAGTGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCGAAGAAATCTCAAACGGGTTTGCATAGCACCAAGCTTCAAATATTCTCGCCACACAT-ATCTCTTTGATTAGGT
GGATATTGCCACATTTGTGG--------ACGTAGTGCTGGATCCTGCTGCAAGAATTCAATCCCTTGAAATAGGACTTCA
ATAGTTTGCTGGCCTTATTGTTGCAGCATCGAAGGATGTGGTCCTTCTTGCTCAAATCCCAGCAACATTAGAGGAGGCTG
AACATGTATTGTTTTTGTTTGTGTGGGTTCGTCAGCTTTACATTAAACTGAATCACCTCTCTTTGTTTA---AAAAAATG
CATCAATTGTTTTCCCCACAAGCATCACTGCTTCC---TTCTGTAAAAGACA-TTTTCTATTAAGCACAAAATCCATGAT
CTAATTAGACTTTTCCCCAACTAAGAAAGAAAATGCAGAACCAAAATACTCGAAATTTCCATAATTACT-----------
----------ACAGCGAGGGTAGTTTGCTCACCAGCTCTGTTTGGCACTGCGCGCGGCGTCGGTGTTGCCTGATTTTGTC
TACATCTATGCAGCGAC----AGAGGTCAAGACTCAGCAGGCAG------------------------------------
---------------------------------
>chrUn_2409
--------------------------------------------------------------------------------
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------------------------------------------------------TGGCGGAGCTTGAAAGAAATCTCAGG
AGGGGCGAAGAAATCTCAAACGGGC-TGTATAGCACAAAGATTCAAATATGCTTGCCCCACATCATCTCTTGGATTAGCT
CGATATTGTCAAATTTGTGGACGTAGACACGTAGTGTTGGATCCCGCTGCAAAAATTCAATCCCTCAAAATAGGACTTCA
TTTGTTTGATGGCCTTATTTTTGCGGCATCGAAGGATGTGGTCCGTGTTGCTCAAATTCCAGCAACAACAAAGGAGGCTG
AACATGTATTGCTTCTGTTTGTGTTGGTTCGTCAACTTTACATTCAACTGAATCGCCTCACTTTTTTTT---GAAAAATA
CATAAATTGTTTTCCCTCAAGAATTGTATTCACCGTTTTTCTGTGAAGGACATTTTTCTATTCAGCACAAAATCCATGAC
CTAATTAGAATTTTCCCCAACTAAGAAAGAAAATGCAGAATCAAAATACTCTAAATTTCCGCAATTTGTAGAGGGGAGAG
ACAGAGAGAGACAGCGAGAGCAATTTGCTCACCAGTTCACTTCTGCACTGCGCGCGGCGCCGGTGTTGCCTGATTCTGTT
TGCGTCCGTGCGGCAGCAATGAGAAGTCAGGACTCAGCAGGTAGGAGCGGAGATGTCTCTGACCAGCAATAACCAATCCC
TAGCCGTTCGCCCGCCAGCGGCCAACCTCCACG
>SNPs
--S---------------------------------------------------------------------S-------
--------------------------S-------------------------------------S--S------------
---------------------------------------------------------------------------S----
-------------------------------S------------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------------------------S----S-----S----------------
-------------------------------S-------------------------------------S----------
--------------------------------------------------------------------------S-----
-------------S------S-------------------------S---------------------------------
-----------------------------------S--------------------------S-----------------
------------------------------------------------S---------------------S---------
--------------------S-------------------S---------------------------------------
--S----------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SSS--S----------------------------------
-----------------------------------------------------S--------------------------
-----------------------------S------------S-------------------------------------
-----S-------------------------------------------------------S------------------
-------------S----------------------------------------S---------S---------------
-----S----S---------S-----------SSSS------------SSSS----------------------------
----------------------------------------------------------------------S---------
------------------------------S--------------S----------------------------------
-------------S-----------------S---------------------------SSS------------------
--------------------------------------------------------------------------------
-------S------------------SS----------------------------------------------------
------S-----------------------------------S--------------------------------S-S--
----S--------------S------------------------------------------S-----------------
----------------------------S------------------------S--------------S-----------
----------S--------------------------------------------------------------S-----S
----------------------------------SSSSSSSS--------S-----------------------------
------------S--------------------------S---------S---------------------SS-------
------------------S-----S--------------S---------------------S------------------
--------------------------------------------------------------------------------
----------------------S--SSS-S---------------S----------------------------------
-------SSSSSS-----------------S----S-S------------------------------------------
--------------------------------------------------------------------------------
----S--S--------------------------------------S---------------------------S-----
----------------------------------S---------------------------S-----------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------------------------------
>forward_1035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CCGGTTAGGAGCTCCCCTAA-----
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------
>reverse_2291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------CCGGACACAGATGGATAGCC----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
