>input_sequence_60896
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------------------------ATGGCGGCCAGGGCTGCAGGTACCGGCAGGCTACTCAGAGCGGCCACCGCCAAGGA
CAGCCGTCTGCCGTCGTCGTC---------------TCCGGCGGCCAGCCGGCCGTCGTGCCGCATCCCGTCTCTCAAGT
TCCCGTTCCTGTGGGGCACCAAGGCGGCGAGGCGCGGGATCGGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATAACCCTG
GGAGCGACCACCGCCAGCACGACGGAGGAGAAGCAACGCCTGCCGGGGGAAGCGGGCAGCGTGGATCTCCTGCTGCCTCT
AGCGTACGAGGTCACCCGGAGGCTGGTGCTCCGGCAGTTCGGGGCGACGTGGCTGGCCCTTACGCGGCGTCGCTGGGCCA
AGGTCGTCGAGGCCGTCATCCACCAGGGCATCGTCAGATGCCAGTCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTC
GGTTCAGTCCCATGTTTCCTCGAGGTAACCAAC-TAAGCGCTTCTTCA----------TCCTCCTATATGTGTGGCCATA
TATGC--------------TGCAAGTCAAGTCTTCAAAGACTGATCAAACCTTTCTTCATGCGTGTC-TGTAGGGTTGTG
GCATTGTTCTGCAGTCGTTCTCCTTGCAGTTCCGTGCCATGTCGCAGACGATAGATCACGCCGAGATCATCAAGCTGCTC
ATCGAAGCATTAGGTACGTACCCGTACTTTTAATCACACACAAGGCACCCTGCGCCATCAATCTGATCGAGTCTGTTAGT
AAC-----TATTTTCTGTCCTCGTT---------------------------CAGACATGTTCCTGATCGGCACCGCCCT
GCTCACGTTCGGCATGGGGATGTACGGCATGTTCTACGGCTCCCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGA
AAGGGGCGAGGATCCGGTCCGTCACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTCATCCTGCTGCTCCAGGCAGGCGTC
CTCGAGAAGTTCAAGAGCGTGCCGCTCGTCACCGGCCTCGACATGGCCTGCTTCGCCGGGGCGGTGCTCGCCTCCTCCGC
CGGCCTCTTCCTGCTGTCCAAGCTCTCGGCCCATCCGCAGACACGCAACAAGCAAGCCTCCTTCGCGTGA----------
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>chr5D_1_TraesCS5D01G389300
AGACAAAAGCACCAGGTGCACCGACCCCGAATGCAGCCCCCGCGCCCGCGAGA-ATGACAAATGTACGAACGACCACACA
CTTGCCCGAAAAGCTTCAAGCTTG-AGACTTGAGAGTCTGCACCCGTACCTTTCGGCTTGCCACCACGGAGTGTGGCTCC
GTCCTCGTACCAGCAGGAGAGAAAACGAAGACGGC--------------------GAGCGTTTTGCATCACGTGCCCGCG
GACGAGGCCGGAGCGGCAAGGAA----CGCGCTGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTC
GTATCGCCTTCCGCTGCCATCTCGCTCTCGTACCT-----GCCGTGACACACGAGCCCACGCGCGCGTCC----GGCCCA
CCTTTCCTAACAGACGGCCAGGTTTAGACGGGCGCGCCAGC----GTTCGCGCCCGGCGAAA--------AATCCCTGGA
TCTTTCT---------------------GGCCGGAAGGAAGTTTGCGCACCAAGTTGCAGCTTCAGGCAAACCTTTCCTC
CTTCCTCCACGCGACATCGCTCTCTCGTGCTGCAGCTGCTGCTACGAGAGCGGTAGGTGCGCACAACGACTCTTCGTTCC
TGTCGTTTCTCGCGCCAAATGACCA-------------------------------------------------------
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------------------------------------------------------------------T---CTACGAGATA
CCAGCAGCACGATGCCGCCGCGGCAC-GGAAAAAGTACGCGCGCGCGCGCGGGCGCTAACACGTCAACGGAACCCTGGGC
ACCGTTGGTGCGGTTCGGCGCCGCGACAAAGCTTCTCCAGCCACAGGAACGAGACGCCC----GCCATTGGAATCGTCCG
CTCCTGATCTTCCACACGCCCAGCTCCTTCACCGCCACGGTTCATTCGC--------------------------CCCGT
CTATTCTTGGAACCTTCCCCGCCTTCTAGTTGCTGCACATGTTCCATTCCATGTCATTCCTCCCTCCCAGTATTTATACG
GCCTCGTGGTTCGAAAGGTCCTCTGC-ACAGTCAATACTTCAGCTTCAACGCAGCGCAGCACAGGCAACGTTGGTTGAAC
ACAAGGAGCTGACCGAGTCCAGCAATGGCGGCCAGGGCTGCAGGTACCGGCAGGCTACTCAGAGCGGCCACCGCCAAGGA
CAGCCGTCTGCCGTCGTCGTC---------------TCCGGCGGCCAGCCGGCCGTCGTGCCGCATCCCGTCTCTCAAGT
TCCCGTTCCTGTGGGGCACCAAGGCGGCGAGGCGCGGGATCGGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATAACCCTG
GGAGCGACCACCGCCAGCACGACGGAGGAGAAGCAACGCCTGCCGGGGGAAGCGGGCAGCGTGGATCTCCTGCTGCCTCT
AGCGTACGAGGTCACCCGGAGGCTGGTGCTCCGGCAGTTCGGGGCGACGTGGCTGGCCCTTACGCGGCGTCGCTGGGCCA
AGGTCGTCGAGGCCGTCATCCACCAGGGCATCGTCAGATGCCAGTCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTC
GGTTCAGTCCCATGTTTCCTCGAGGTAACCAAC-TAAGCGCTTCTTCA----------TCCTCCTATATGTGTGGCCATA
TATGC--------------TGCAAGTCAAGTCTTCAAAGACTGATCAAACCTTTCTTCATGCGTGTC-TGTAGGGTTGTG
GCATTGTTCTGCAGTCGTTCTCCTTGCAGTTCCGTGCCATGTCGCAGACGATAGATCACGCCGAGATCATCAAGCTGCTC
ATCGAAGCATTAGGTACGTACCCGTACTTTTAATCACACACAAGGCACCCTGCGCCATCAATCTGATCGAGTCTGTTAGT
AAC-----TATTTTCTGTCCTCGTT---------------------------CAGACATGTTCCTGATCGGCACCGCCCT
GCTCACGTTCGGCATGGGGATGTACGGCATGTTCTACGGCTCCCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGA
AAGGGGCGAGGATCCGGTCCGTCACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTCATCCTGCTGCTCCAGGCAGGCGTC
CTCGAGAAGTTCAAGAGCGTGCCGCTCGTCACCGGCCTCGACATGGCCTGCTTCGCCGGGGCGGTGCTCGCCTCCTCCGC
CGGCCTCTTCCTGCTGTCCAAGCTCTCGGCCCATCCGCAGACACGCAACAAGCAAGCCTCCTTCGCGTGAACGTGTCCAA
TGTCCCTGCTGCATAAGCAGCATAACATGCATTATTCATTTGTTCTTTCATTACAAGTTAGCAAAGCAAGACATAGTACT
TATTAATAGAAAAGCGAAAACCTATGAAGCTCTTGTGCCTTTTCC-TCTTTTCTCTCACTGCCCGTAGCGGTTTAATTTG
TAGCTTGAGAGCAATGTCAATAAAG------------------------------------ATTTCGGAGCGACTCTCTC
TCGTGCTCCTTTGTCATCAGCCACGTAAAAACTCGTGGTGTGTTTCACTTTCACGTTGCCTCAGGAAATTCCAGTGGCCG
CGTTCCGGCATCGACTGGGATGGGCGGCCGAG--------TGATTTCGATGGCAAAGGCGTGAGTGACGGTACCTGTGGC
GCCGCGGCGTCGGCTCTTCCTTATTC-GACCGTTCGCGGATTCTGCTCCGCCCCTCGCTGTCGCGCTGCCGCTTACAAGA
GGGAAGAGGCGGTGTGGCGCGAGGAGGCAGGGATCACCGGCTCAGGCGTGGTGGTAATTTTT-GGGACTGTCTATTTGAT
ATTTGACTGTTTTACAATTTGAGAACATTCAAAAATCCTGACAAATGAACATATGACACCTGTACAGTCACAAAAACAGC
TGACAGACATAAAGGACGT--CAAAACGGGTCAGAGAAAGTAGCTGACCCGGTAACCCTGGACAACAAACCGCTCCAGAA
AAATCGGCGACCTACCCCTCTCTTGATCTTCAGGGTCACACAGGACACAGCATGTGCCCAGCTTGCAAC-----------
---CAAAACCCTCCCGCAAACCACTGGACAGATCTCGCCTAACAGCAC-AAAAAGCGAATCAGAAAGGGGGAGAAGAAAA
-GAAGGGAGAACATGGAGGCGGCCATGGGCGATGGGGCAGAAGAAGAA-GGAGGGCAAACAGAAACCAGAAGAGCTTCGA
AGAAGATGTTGTACCTGACGAGCAGCAAGAAAGAAGGACATCAGAGGGAAATCGGCATCATGATCCACAGGTCAGCAAAA
ACAGTCCCAACTGCTC
>chr5B_2
-GACAAAGGCACCCGATGGACCGACGCCAAATGCAGCCCCCCACGCCGCGAGAGATGACAAATGTACGAACGAGCACACA
CTTGCCCGAAGAACTTCAAGCTTG-AGACTTCAATGTCTCCACCCGTACCTCTCGGCGTGCCACCACGGCGTGTGGCTCC
ATCCTCGTACCAGCAGGAGAGAAAACGAAGACGGC--------------------GAGCGTTTTGCGTCACGTGCCCGCG
GACGAGGCCGGAGCGCCAAGGAAGGAACGCGCTGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTC
GTATCCCCTTCCGCTGCCATCTCGTTCTCGTACCTGCCGAGCCGTGACACACGAGCCCACGCGCGCGCGCTTATGGCCGA
TCCTTCCTAACAGACGGCGA---------------------------------------AAA--------AATCCCTTGA
TCTTTCCGCGCTTCATCAAATTACCGAAGACCGGAGGAAAGTTTGCGCACGAAGTTGCAGGTTCAGGCGA-CCATTCCTC
CTTCCTCC------CGTCGCTCTCTCTAGCTACTCCGAC--------GAGCGGTAGGTACATACAGCGACTCTTCGTTCC
TGTCGTTTCTCGCGCCAAATGACCACTATGCAGCTTAGAGCATCTCCAACAGTCGCGTCAAACTAGCGCCGCGTTGTAAA
AGTGAGCGTTTTAGCGCGCGCGCAACCGGTGTAGCTGCTCCAACGGGCGCGCAAAAACAGCGCGCCCCATATGCAGTTCA
GCACGCTGGCCGAAACGCAATCGCGCGCCGCTTATTTGCTGCGCACCCGCGCGCTGAACTCTCGCGCGCTTGCTCTCCCA
CTTCCAACCCTATCCGGCCGCGCCGCCGCCGTCGCCCGCGCCCCCCGACGACCGTTCCGGCACTTCCCCCGCCTATCCCC
GCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGGCCCTCACGCGCGCCCGTCGTCCGAGGAACAGCGCCCG
AGCGCTCGCCCGCGCCGCGCCCGCAAGGTGTTCGGCAAAACGCCTACAAGGTATGTATTGCTCAAACTTCATGAATTTGG
TGCATGTTTTTAATTGTAATTTTTATAGTATAGTATTGAACATTGTAGATGAGTTCGTCGTATGATGCTTCCGAAGAAGA
ATTTGATATGGAAGAGGAGGAGGATCTTGCAATGATCCTAGCTATGCATATCAATAAAAAACCGAAGCACGGTGGTTCGG
TTATAGGTCGGGAAAAAATTTGGAGAGATAGGATTGATACCCATAACAGATTGATGAAAAATCTTGATTTTCACAATGCT
CAGGCGGCGGGTAGAAAAGATGTGGAGAGAGCATTTGGGATTTTGCAAGCCTAATTTGCTATTGTGAGAGGTCCGGCTAA
ATTTTGGGATCAAAAAATGCATTGGTACATCATGCACGCTTGTGTGACCATGCACAACATGATCATCGAGAATGAGCGTG
GCCAAGATTTAGACTACTCACAGTATGAGCTCTTAGGACATCCCGTGCGAGTGCGACGAAGGGCTGAAAGGGTAGCCCGT
TTTGTTGCCTCCTATCATGCCATTCGGCGTCCCGCAACGCACAATGAACTTCAGAAGGATCTGATTGAAGAGTGGCATGG
AATGGACAACAAAGAAGATGATTTCTGCATTCGACATTGTATTGTTCATGAATTATTTGTTGTATTTATTGTAGTATTTG
TTGTACTGAACGATAAACTATTTGTTTGGGTTGTAATGATAATGAAATTGAACTATTTATGTTGATTTATTTTGTTTGTT
TGATCATTTTTGCTTTTCTTTGATATGTATATGTGGTTTGTGCGTGCCGCGCGCTGTATTTTTGCGCACTGCTGGAGCGG
CGCGCGCGCTGCATTATAGCGCGGCTGGTGGAGCCAGAGCTGACGGCCGCGCTAAACCAACCAAAGCGCGCGCGCCATAC
TAATTTTTAGCGCGGCGCGAAGCGCGGCTGTTGAAGATGCTCTTAACGAGGCATCGTTTCAGAGTTT---CTACGAGATA
C---CAGCACGATGCCGCCGCGGCACCGGAAAAAGTACGCGCGCTCG----GGCACTAACACGTCAACGGAACCCTGGGC
ACCGTTGGTGCGGTTCCGCGCCGCGACAAAGTTTCTCCAGCCACAGGAACGAGACGCCATTCGGCCATTGGAATCGTCCG
CTCTT------CCACACGCCCAG---CTTCACCGCCACGGTTCATTCAACTCCGGCCCTGCCCTGCCCTGCCCTGCCCGT
CTATTCTTGGAACCTTCCCCGCCTTCTAGTTGCTGCACAT-----ATTCCATGTCATTCCTCCCTCCCAGTATTTATACG
GCCTCGTGGCTCCACAGGTCCTCTGC-ACAGTCAATACTTCAACTTCAAAGCAACGCAGCACAGGCAACGTTGGTTGA--
ACAAGGAGCTGACCGAGTCCAGCAATGGCGACGAGGGCTGCAAGCACCGGCAGGCTGCTCAGAGCGACCACCGTCAAGGA
TAGCCGTATGCCGTCGTCGTC---------------GCCGG---------------CGTGCCGCATCCCCTCTCTCAAGT
TCCCGTTCCTGTGGGACACCAAGGCGAGGCATGGGAAGATCAGGCGCGCCGCCGAGCAGAAGGCGGCGCTGATCACCCTG
GGAGCAGCCACCACCAGCACCACGGAGGAGAAGCAACGCCTGCCGGGGGAAGCGGGCAGCGTGGATCTCCTGCTGCCTCT
GGCGTACGAGGTCACCCGGAGGCTGGTGCTCAGGCAGTTCGGGGCGACGTGGCTGGCCCTCACGCAGCGTCGCTGGGCCA
AGGTCGTCGAGGCCGTCGTCCACCAGGGCATCGTCAGATGCCAGTCGTTCACGCTCATCGGCGTCGCAGGATCCCTCCTC
GGTTCAGTCCCATGCTTCCTCGACGTAATTAACTTAAGCTCTTCTTCC----------TCCTCCATTCACGCTGCAACCT
TC---------------GTTGCAAATCAAGTCACCAGAGACTGATCAAACTT---TTCATGCGTGTC-TGTAGGGTTGTG
GCATTGTTCTGCAGTCCTTCTCCTTGCAGTTCCGTGCCATGTCGCAGACGATAGATCACGCCGAGATCATCAAACTTCTC
ATCGAAGCATTAGGTACTTACTGGTCTAAT--------CACAAGGCATCCTTCGCATCAATC-----CGAGTCTGTTGCT
AACTGGAGTATTTTCTCTTCTTGCA---------------------------CAGACATGTTTCTGATCGGCACCGCCCT
GCTCACGTTCGGCATGGGGATGTACGGCATGTTCTACGGCTCGCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGA
AAGGGACGAGGATCCGGTCCGTCATGCAGGCCAAGTCGAGGTTCGGCCACGCCGTGATCCTGCTGCTCCAGGCCGGCGTC
CTCGAGAAGTTCAAGAGCGTGCCGCTCGTCACCGGCCTCGACATGGCCTGCTTCGCCGGCGCGGTGCTTGCCTCCTCCGC
CGGCGTCTTCCTGCTGTCCAAGCTCTCCGCGCATCCGCAGCCATGCAACAAGCAAACCTCCTTCGCGTGAACGTGTTCCA
TGTCACT------------GCAAAACATGCAATATTCATTTGTTCTTTCATTTCAACTTAGCAAAGCAAGAAATAGTACT
TACTAATAGAAAAACCAAAACCTGTGAAGCTGGTGTGCCTTTTTCGTCTTTTCTCTCACTGCCGGTAGCGGTTTATTTTT
ATTTTTTTTATTTTTTTGG----------------------------------------------------------CTC
TCCTGCTCTTCTGTGATCAACCACGTAAAAACTCGTGGTGTGTTTCATTTTCACGTTGCCTCACGAAATTCCAATGGCCG
TGTTCCGGCATCGACTGGGATGGGCGGCCGAGACGCCGAGTGCTTTCGATGGCGAAGGCGTGAGTGACGGTACCTGTGGC
GCCACGGCGTCGGCTCTTCCCTATTCCGACCGCGCGCGGATTCTGCTCCGCCCCTCGCCGTCGCGCTGCCGCTTAGGAGA
GGGAAGAGGCG---------------------------------------------------------------------
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>chr5A_2
-GACAAAAGCGCCCGATGGAGCGACGCCAAATGCAGCCCCC-ACGCCGCGAGA-ATGACAAATGTACGAACGAGCACACA
CTTGCCGGAAAAACTTCAAGCTTG-AAACTTGAGAGTCTGTGCCCGTACCTTTCGGC------------------GCTCC
GTCCTCGTACCAGCAGGAGAGAAAACGAAGACGGC--------------------GAGCGCTTTGCGTCACGTGCCCGCG
GACGAGGCCGGAGCGCCAAGGAAGGAACGCGCCGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTC
GTATCGCCTTCCGCTGCCATCTCGTTCTCGTACCT-----GCCGTGACACACGAGCCCACGCGCGCGTCC----GGCCGA
CCCTTCCTAACAGACGGCCAGGTTTAGACGGGCGAGCCAGC----GTTCCCGCCCGGCGAAA--------GATCTTTCTG
CC---------------------CCGGAGGCCGGAAGGAAGTTTGCGCACGAAGTTGCAGGTTCAGACAA-CCTTTCCTC
CTTCCTCC------CATCGCTCTCTCTAGCTACTCCGAC--------GAGCGGTAGGTACATACAGCGACTCTTCGTTCC
TGTCGTTTCTCGCGCCATATGACCACTACGCTG-----------------------------------------------
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-----------------------------------------CTTAACCAGGCATCGTTTCAGAGTTTGTACTACGAGATA
C---CAGCACGATGCCGCCGCGGCAC-GGAAAAAGTACGCGCGCGCG----GGCACTAACACGTCAACGGAGCCCTGGGC
ACCGTTGGTGCGGTTCGGCGCCGCGACAAAGCTTCTCCAGCCACAGGAACGAGACGCCC----GCCATTGGAATCGTCCG
CTCTTGATCTTCCACACGCCCAGCTCCTTCACCGCCACGGTTCATTCGC--------------------------CCCGT
CTATTCTTGGAACCTTCCCCGCCTTCTAGTTGCTGCACATG-----TTCCATGTCATTCCTCTG----AGTATTTATACG
GCCTCGTGGTTCGACAGGTCCTCTGCAACAGTCAATACTTCAACTTCAACGCAACGCAGCACGGGCAACGTTGGTTGA--
ACAAGGAGCTGACCGAGTCCAGCAATGGCGGCGAGGGCTGCATGTACCGGCCGGCTGCTCAGAGCAACCACCGCCAAGGA
CAGCCGTCTGCCATCGTCGTCCCCGGCGGCCAGCCGGCCGG---------------CGTGCCGCATCCCGTCTCTCAAGT
TCCCGTTCCTGTGGGACACCAAGGCGAGGCAAGGGAAGATCAGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATCACCCTG
GGAGCAGCCAGCGCCAGCACCACGGAGGAGAAACAACTCCTGCCGGGGGAAGCGAGCAGCGTAGATCTCCTGCTGCCTCT
GGCGTACGAGGTCACCAGGAGGCTGGTGCTCAGGCAGTTCGGGGAGACGTGGCTGGCCCTCACACGGCGTCGCTGGGCCA
AGGTCGCCGAGGCCGTCGTCCACCAGGGCATCGTCAGATGCCAATCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTC
GGTTCAGTCCCATGTTTTCTCGAGGTAATTCCGACAAATGACCCTTTATGTCACTCACTTCTCAATCAAGTGTAACCATT
TATGTGATGCAAATACTGTTCGAAATCAGGACGTCCAAGACTGATCAAACTT---TTTTTTGTGACTGTATAGGGCTGTG
GTATTGTTGTTGAGTCGTTCTTCTTGCAGTTCCGAGCCATGTCCCAGACAGTAGATCCAGCCGAGATCATCAAACTGCTC
ATCGAAGCATTAGGTACATGTTCTTCATCTGG----------------CGTTCGCTTCAACA-----TGAGCTTTGCGCA
AACCATAGTACTCCATGTTACTAACTTGGGGACAAACTAATTCCTCTTCTTCCAGACATGTTTCTGATCGGCACTGCTCT
GCTCACGTTTGCCATGGGGATGTACGGCATGTTCTACGGCTCGCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGA
AAGGGGCGAGGATCCGGTCCGTCACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTGATCCTGCTGCTCCAGGCCGGCGTC
CTCGAGAAGTTCAAGAGCGTGCCGCTCGTCACCGGCCTCGACATGACCTGCTTCGCCGGGGCCGTGCTCGCCTCCTCCGC
CGGCGTCTTCCTGCTGTCCAGGCTCTCGGCGCATCCGCAGTCATGCAACAAGCAAGCCTCCTTCGCGTGAACGTGTCCGA
TGTCACT------------GCAAAACATGCAATATTCGTTTGTTCTTTCATTTCAAGTTAGCGAAGCAAGAAGTAGTACT
TACTAATAGAAAAACCAAAACCTGTGATGCTCTTGTGCCTTTTTCGTCTTTTCCCTCACTGCTCGTAGCGGTTTAATTTG
TAGCTTGAGAGCAATGTCAATAAAGATTCTCGGGGTAGGAAGAAAAGGTACTGCAAAAATCATTTCGGAGCGA----CTC
TCGTACTCTTTTGTGATCAACCACGTAAAAACTCGTGGTGCGTTTCACCTTCACGTTGCCTCCCGAAATTTCAGTGGCCG
CGTTCCGGCATCGACTGGGATGGGCGGCCGAG--------TGCTTTCGATGGCGAAGGCGTGAGTGACGGTACCTGTGGC
GCCGCGGCGTCGGCTCTTCCCTATTCCGACCGCGCGCGGATTCTGCTCCGCCACTCGCCGTCGCACTGCCGCTTAGGGGA
GGGAAGAGGCAGTGTGGCGCG-----------------------------------------------------------
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>chr4A_3
--ACAAAAGCAGTCGATGGAGCGACGCCAAATGCAGCCCGC-ACACTGCGAGA-CTGAGAAATGTATGTACGAGAGCACA
CTTTCCTGAA-AACTTCAAACTTGCAAATCTCAAAGTCTACACTCGTACCTCTCGGCGTGCCACCCCGGAGTGTGGCTCC
ATCCTCGTACCAGCAGGAGAGAAAACAAAGACGGCATGCAGTAGTAGTAACCAACGAGCGTTTTGCGTCATGTGCCTGTG
GACGAAGTTGGAGCGGC----AAGGAACACGCTGCCGCTGCACACG----CGTCCGCCCGGCGGCTCGCCCGTCCACCTC
GTATCGCCATCTGCTGCCATCTCGTTCTTGCACCT-----GCCATGACACTCGAGCCCACGCGCGTGTCC----GGCCGA
----TCCTAACTGACGGCCAGGTTTAGACGGGCCCGCCAGCCTACGTTCGCGCCCGGCGAAAAGTCCCTGGATCTTTCTG
CC---------------------CCGGAGGCTGGAAGGAAGTTTGTGCACAAAGTTGCAGGTTCTGCCAA----------
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>chr7A_2588
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--------------------------------------------------GTGGTTATTTCTAGGGACTGTCTATGTGAC
ATTTGAGTGTTTTCCATTTCAACAACATTCAAAAAACCTGACAAATGAACAGATGACACCTGTACAGCCACAAAAACAGC
CAACAGCGGAAAAAGATCAGCCAAAACGGGTCGGGGAAAATACTTGACCCGGTAACCCTCGACAACAACCCACTCCAAAA
AAATCAGGGACCTACCCC----------GACCTCCAGGCCC---ACACAACATGTGCCCAACTTGCAACGCACGAAAAAG
GGCCAAACCCCTCCCGCAAACCACTGGACAGATCTCACCTAACAACACAAACAAGCGAATCAGAAAGGGGAAGAAGAAAA
AGAAGGGAGAACATGGAGGCCGCCATGGGCGATGGGGTAGAAGAAGAAGGGAGGTCAAACACAAATCAGAAAAGAGTTGA
AGAAGATGTTGTACCTGACGAGCAGCAAGAAAGAAGATCGCCAAAGAGGAATCAGCAACAGGATCCACAGGTCAGCAAAA
AAAGTCCCAACTTCTC
>chr2D_2600
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---------------------------------------------------------------GGGACTGTCTATTTGAC
ATTTGAGTGTTTTCCAATTCAACAACATTCAAAAAACCTGACAAATGAACAGATGACACCTGTACAGCCACAAAAACAGC
TAACAGTGGAAAAAGAAC-GCCAAAACAGGTCGGGGAAAATACTTGACCCGGTAACCCTCGACAACAACCCACTCCAGAA
AAATTAGGGACCTACCCCAACCTCTGTCGACCTCCAGGCCC---ACACAGCATGTGCCCAACTTGCAACGCACGAAAAAG
GGCCAAACCCCTCCTGCAAACCACTGGACAGATCTCACCTAACAACACAGAGAAGCGAATCAGAAAGGGGAAGAAGAAAA
AGAAGGGAGAACATGGAGGCAGCCATGGGCGATGGGGTAGAAGAAGAAGGGAGGTCAAACACAAATCAGAAAAGAGTTGA
AGAAGATGTTGTACCTGACGAGCAGCAAGAAAGAAGATCATCAGAGAGGAATCCGCAACAGGATCCACAGGTCAGCAAAA
AAAGTCCCAACTTCTC
>SNPs
S------------S-S--S------S--S------------SSSS----------------------------S------
------------S--------------------------------------------S----------------------
------------------------------------------------------------------S-------------
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------------------------S-----------------------------------------------------S-
--S--------------------------------------------------------------------------S--
------S-------------------------------------------S---------S---------S---------
--------SSSSSS------------SS---S-SS-SS-SSSSSSSS-----------S-SS---S--------------
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-SSS-------------------------------------------SSSS---S-------------------------
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---S----------------------------------------------------------------------------
-----------------------------------------SSSS-----------------------------------
--------------S---------------------------S----------S------------------------SS
--------------------------------S---------S-------------S---------S-------------
------------------------------------S----SSSSSSSSSSSSSSS------------------------
---------------S----------SS-SSSS-SSS----S-------------------------------S------
-----SS-------------S-----------------------------------------------------------
S------------------------------S----------------------------S-------------------
-----------------S--------------------------------------------------------------
----------------------------SS----------------------------------SS--S-----S----S
----S-------------------S-------S-----------------S-SSS-------------------------
-------------------------------------------------------------------------S------
-----------------S---S---SS-S-SSSSSSSS---------S---S---SSSS-SSSSSSS----------SS-
------------------S--S-SS-------------------------------------S-----------------
------------------------------------------S-------------------------------------
-------------------------------------------------------S-----------------S------
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----S-------------------------S---------S--S----------------------------------S-
----S--SSSSSSSSSSSS---S--------S--------------------S------------------S--------
--S----------S-S-------S-------------------S------------------------------------
-------------------------------------------------------------------------SSSS---
--------S-----S----S-------------------------------------------S----------------
------------------------------------------S----------S--------------------------
--------------------S-----------SS------------------------S----------------SS---
---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----S------------------S
------S------S-----SS-S------------S---------------S---------------S------------
-S----SSSS---S--SSS-------------S-S----S--SS---------------S--------S--S--------
-----S-S----------SSS--SSS--SS-SSSSSSS-S-SSS----------------S-------------------
-------S----------------------------S-------S------S------------------S---------
--------------------S----------------S----------------S------S---S-----S--SS-S--
------------------------------------SS--------S-S----S---S--S-------------------
-S----------S---
>forward_93
-------------------------------------------------------------------------CCACACA
CTTGCCCGAAAAG-------------------------------------------------------------------
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>reverse_3712
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-------------------------------AATCACACACAAGGCACCCT-----------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>forward_571
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CCTTTCCTC
CTTCCTCCACG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>reverse_4523
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATTTCGATGGCAAAGGCGTG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
