>input_sequence_60895
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------TTATAAAACCCCTC--CCTCCGTCCATCCATTTCCACCTCAAATCTCAAAGTCGC------ACAACGCCACAAC
CCAAAGCACAAGGCCGCACCCA--------CCTTTCCCCGTTCTTCTCCGGCGCCGAACATGGCCGTCGACCTCATGGGT
TGCGGCTACGCCCCGCATGGCCACGCGGCCGAGGCCGAGGAGCAG---------TTCCAGGAGGCCGCTGCCGCGGGGCT
CCGCAGCCTCGAGCTCGTCATCTCCTCCTTCTCCTCCCGCGCCGGCTGCG---CGCCGCCCCTCGGAGAGATGGCCGACC
AGGCGGTGTCCAGGTTCCGCCGGGTCATCAACATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCTGTTGGA
GATGCCGCCGACTCGTTGACTCCCCCTCCTGAATCCTCTGCTCCTCCTCGGATGCCGGCCCAGGCACT------GGCACC
GGCTGTCTCGCCGCAGCTGGCGCCGCAGAAAAGCGTGACGCTGGACTTCACGAAGCCTTTGAAGGCGCCGGCGGCGGCCC
CGGCTGCCGCGCCTTCGGTGACGTCGACGTCTTTCTTCTCGTCCGTGACGGCGGGGGGCGATGGCAGCGTGTCGAAGGGC
TGGACCCAGCTGGTGTCCTCCGGCAAGCCGCCGCTCCCGGCTGGGACCAAACGCAAGCAACGCCAACAGCAGACGCGCTG
CGCGCACT------------------CCGACGCCGCCGCCGCCGGTGGCCGGTGCCACTGCTTGAAAAAGCGCAAGAACC
GGGTGAAGTACACGACGCGCGTGCCCACGGTAACCTCGGGCGCGGCGGACATCCCCGGCGTCGGCGACAAGTACTCGTGG
CGCAAGTACGGGCAGAAGACCATCAAGGGGTCCCCTCACCCCCGCTGCTACTACAGGTGCGGCACCGTCAAGGGCTGCCC
GGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCCGCCATGCTCGTCGTCACCTACGAGGGCGACCACTGCCACGACA
CTTGGCCGCCGGCCGCCGCAAATTAAAGCTCCCCGGCAGCGACAT-------GACTCGATGTGCTTCTTCCATTCGTTCT
TTGTAACGGGGGCTTGTGTAAAGGATCCAAAATTAGGA------------------------------------------
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>chr5D_1_TraesCS5D01G071800
CTTCAACGTCGAATTCGCCGTCGGCGCTACCGTCCACCTCGTCGTCCGAGAGGCGCGCTTCGCCTCCGTGAAGATCTTGT
GCTCCGCCTCCACTAGCTCGGGGTACTGGCCGTGGAGGTCCGCCATGTACTCCTCATCGGCGGCCTCCTCCGCGATGCGC
TCCCTTT----------CTCCCTAGCCACCGCCACACCACCCCCCGCGCCCGGCGCTGACGGGTCGAGCTCAATGGGAGC
CTCGCCCCACAGGACATTGAGGCGGGCAACAACGCCGTGCAGTCAAACCTGCCACCGGTCGTACTCGCGGGTGGCGAGCT
CGACCATGTGGAAGGAGCCGATCCAATGCTTCTTGTGGGTGTCATGGTCGGTGATCTCGGCCACCCACGCCCCGCACGCC
CGGCCGGACA-CCGAGGTACTTCCTCTATGGCTACCACGGCGCGAGAAGGTTGGGGAAGTCGGCGCGCCGGCGGAATGGG
A------CATCGTCACGACGGCGGCTTGAGGACGGCCCCGCGCAACGCTTGTGGCGGCGCGGATCCGCGCTGCGGATGGG
CGGTGGGGACCGACAGCCACATGATCCGGCCATTGGGGAGGAGGGGGCGACGGGGAATTGTGGGGTGGGAGGGGGCGTCG
GCGGCGGGGATTGAGGAGAAGGAGAGGCAGAGGAGGGTGA-------------------------------------TAG
ACGCCAGATACGCGGTGGAGGAAAAGTTATCCTCCTCTATGGGTTTTAGGGCTTCAGCTTGGC-----------------
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-------------------------------------------------CTAAAGTTTACTCAGCCAGATACTTCTTTAT
TTTT--TAAGGGATCGGCTAAAGTTGCTCCAAAATAAGTGGCAGAGATAAATTACAGATCTCGACAATAAGATGGCTGGA
AACGAAACTTGAATCACGCGAGGGCTATTTCAGAAAAGACC-AAAAAATGGCGTTTCGGTTAACCAAATCCTTTGACTTA
AGCGCATACTATTCCTTTCCCTAAAAGAAAAAACAAAAGCGCATACTATTCCTCGTCCTCCC---CTCCTCCTCCCATTT
TCCGCTTTATAAAACCCCTC--CCTCCGTCCATCCATTTCCACCTCAAATCTCAAAGTCGC------ACAACGCCACAAC
CCAAAGCACAAGGCCGCACCCA--------CCTTTCCCCGTTCTTCTCCGGCGCCGAACATGGCCGTCGACCTCATGGGT
TGCGGCTACGCCCCGCATGGCCACGCGGCCGAGGCCGAGGAGCAG---------TTCCAGGAGGCCGCTGCCGCGGGGCT
CCGCAGCCTCGAGCTCGTCATCTCCTCCTTCTCCTCCCGCGCCGGCTGCG---CGCCGCCCCTCGGAGAGATGGCCGACC
AGGCGGTGTCCAGGTTCCGCCGGGTCATCAACATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCTGTTGGA
GATGCCGCCGACTCGTTGACTCCCCCTCCTGAATCCTCTGCTCCTCCTCGGATGCCGGCCCAGGCACT------GGCACC
GGCTGTCTCGCCGCAGCTGGCGCCGCAGAAAAGCGTGACGCTGGACTTCACGAAGCCTTTGAAGGCGCCGGCGGCGGCCC
CGGCTGCCGCGCCTTCGGTGACGTCGACGTCTTTCTTCTCGTCCGTGACGGCGGGGGGCGATGGCAGCGTGTCGAAGGGC
TGGACCCAGCTGGTGTCCTCCGGCAAGCCGCCGCTCCCGGCTGGGACCAAACGCAAGCAACGCCAACAGCAGACGCGCTG
CGCGCACT------------------CCGACGCCGCCGCCGCCGGTGGCCGGTGCCACTGCTTGAAAAAGCGCAAGAACC
GGGTGAAGTACACGACGCGCGTGCCCACGGTAACCTCGGGCGCGGCGGACATCCCCGGCGTCGGCGACAAGTACTCGTGG
CGCAAGTACGGGCAGAAGACCATCAAGGGGTCCCCTCACCCCCGCTGCTACTACAGGTGCGGCACCGTCAAGGGCTGCCC
GGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCCGCCATGCTCGTCGTCACCTACGAGGGCGACCACTGCCACGACA
CTTGGCCGCCGGCCGCCGCAAATTAAAGCTCCCCGGCAGCGACAT-------GACTCGATGTGCTTCTTCCATTCGTTCT
TTGTAACGGGGGCTTGTGTAAAGGATCCAAAATTAGGAATATAGAAGATGTTTTCATCAAGATTGGAAACGCATGCCAAT
TACGTACTAGTACAAGATTT-CACAGCCTTGGTGTTGGACCTCGCCGCCGAGGGCAATTCTGACGGGGTGGTGGTCATGA
GCACGA----CAGTCTTCGTCGCCTACCTCCGTCCGGCCGCCTTGTGAGGCCCCTGGAGACAATCACAAGCAACAATGGA
GGTAGGTGGGAGATTTGGGATGAGCAGGATAGAGAGGCAAGGGGAGAACGAGAGAAGGGAGACAGATTTAGACGTTTTCC
ATCTCATTAGCTGTCGAGCACACACGGTCAGAGTTTAAGTAATCCACGCCAGTGACACGTGGGCCCACTCACATGGCACG
CAGGCTGCTGGCAGCTGGTCTGACTCTTTTTTTATATATATCAGTAGATGGTCTGACTCAACCAGCCGCACTTGCTCGTT
CCGTCGTAGTGGGAGTAACATAGGTAGTAACATAGATGCCACATAAGCAAAAATGATGAGGTGGCAAATAGTTAATGAGG
AGAGAGGCAAATAGAGTAACATAATATGTTACCATCGCATAGCGCTTTTCAATGCAAAATGAGTCTATAAAGTAATAAAT
GAAGACATCTATGTTACCACATATATGACACTACCCACTATGAAGGTAGTAACATAGACTAGTAGCATATTCATGTTACT
AGTCTATATTACTCTCCACTATGACCAGCCTTAGGCTCAGTTGTCGTAGGCTCGTCGTCTATCAATGTCATCGATCCTGT
AAGCAACTCCAACGAACCGACTCAAAAAAGTATGTTTTATCTTTTTTTGTCCATTTGAATCGACCGTGTGCCCGACCATC
CAACCCAATTCACGTCCGTGCAGAAAACTATATGAATTTTTAAGAAACCCGTGGCCATAGAACGTAGCAGCGGTCATTGC
CATCATCCAGAGTTCATGTCGATATCGTGCCAGCCTCAAAAAAACACTGCACAGTTCATGCTGGTGCACTTGCCAGCTGT
CGG
>chr5B_6
-----ACGTCGAAGTTGTCGTCGCCGCCGCCGTCCACCTCGTCGCTCGAGGGGACGATGACCTCCTCGTCGTCCGCGC--
GCTCCGCCTCCACTAGCTCGGGGTACTGGTGGCTGAGGTCCGTCATGT-CTCCTTGTCAGCGGCCTCTGCCGCAATGCGC
TCCCTCTTCTCCCAGTCCTCCCTAGCCACCGCCGCATCACTACCT----CCGGCGACGGCGGGTTGAGCTCGACAGGCGC
CTTGCCCCACGGGAAGTTGAGGCGGCCGACGACGTCCTGCAGCCGGACCTGCCACCGATCGTACTCGTGGGCAGCGAGCT
CGGCCATGCGGAAGGAGCCGATCCAATGCTTCTTGTGGGTGTAATGGTCAGTGATCTCGGTCACCCACGCCCCGCATGCC
CGCTGCCGGACCCGAGGTACTTCCTCTATGGTTGACGTGGCGCATGGAGGT-----------------CGGCGGGATGGG
GCCGCATCATCGCGGCGGTAGCGACCTGAGGACGCGCCCGCGAAGTGTTCGTGACAGCGCGGACCCACGCTACGGATGGG
CGGTGGGGACGGGCGGCCACAAGATCCGACCATTGGGAAGGAGGGGGCGCCGACGACAT---------------------
-------GGATTGGGGAGGAGGAGAGATAGAGGAGGGTGAGGATTTTTTACTCAGCTGCCAAGCAGTGGAGTAAATATAG
ATGCCAGATACACAATGAAGGAAAAGTTATCCTCCTCTATGGGTTTTAGTGGTTCGGCTAGGTCCCGGTTAGAGGAGTAA
AAATCTGATTTTACTCCTCCAACCGACACCTAGCCAATCTCCTCAACCGTATAACGGAGCATATGTTGGAAATGCCCCAG
AGGCAATAATATTGTATTATTATATTTCTATTTTCATAATTAGGAGTTTATATTTCATACTATAACTGCTGTGATACTGG
AATATGTGATTCAATGGAAAACTCACATGCACGTGTGGAATGATAAATGATAAAGTATAGGTTCCCAATCTCCTCTAAGA
CCGGCTCAAGTATTGCTGGTGATCATGTTTTCCGGGCCTTAGGATATCGTTAAGTGTAACGATAGTCCTAAAACAACTTT
GAGAGTATGACGTTAGAAGAACGATCATATTGATTCGACCCTACGTTGAGATAATATCGTCTGAAATCAGTTGTTATAAC
ATGGAGTGTTAGCATGTGTTTTAGTTCCTCGAACCATGAGAGTATCATAGTCACTTCCTATCATACAGTGGACTTTGGGG
TTGCTCAAACGTCATCTATAACACGGTGATCATAACAACAACTTACGGTTCATCGAAAAGTTTGACAAGGGACTAGATAG
CTCGAGAGTGGGATTTTGCTCCTCCAATGATGAAGAGATATTCTTAGGGCCCTCTCGGTGTGACGACATCCATCATCGTC
TGTCCAGACACAAGTGACTAGGTCACAGGGATGCCCGGACGTTTCAACGAGAAAGAAGAACAAAACTGGTAACGAGAACA
ACGGTATAGTAAGCATGTGTATGGCTCAGGAGGATACCGATGCATACCGAGTTTTTTGAAGTATCACGAAGCAAAGGGAA
TATCACATTATAACCAAAGGTTCACTCGAATGTCATTCGTGTAATCATAGGGTAGATATGGACGTCCACGGTTCTACTAT
CGGTCATTGAACAAAGGGGTTTCGTTCTTGTTTATGATTTACCAAATCTATGAGGTCACAAGCTTTAGGTAATCATGATA
CTTTGAGTGTTAGCAGGATGATAGTATTGAGGATTTATTTGTGGAAATTTTTCATTAATATTTGAAATAGTTCTGAGAGG
AACCGAAAGCGTTTCAGGGTCAACGGAAGGGTTTCGGAATTTATTGGGCAATACCTGGTATTACCGATAATTAATATACA
AGTCAAAGATGTCTCCGTTGATGTTAAATTATATATAATATGCTCTAGTAATGGTTAGAGGGCTTTTGTAATTAATTAAT
ATCAACGGGCCTTAAAAAGGCCTAGTGGTGAAAGGCAACTTGGGCCACAAGGGCCCAAGTGGACGTGGCGCCCCCTTTCC
ATAAGGGGAGGTCGAACTATAGTCTGGAAGGTCCCCTTCCCCTATAGCCGGTGCACCAAGGAGGGAGTCCTTCCCTCCTT
GTGTGTTGCCTCTCCTCTTCCCTCTAACCTATATATACATGAGATACTGGCCACAATTGATAAACAAGTTTTTGGAGCCT
CCCCTAGTTCATCTAGTTCTAGTTTTAATTGGTCCTAGTTGACTAATCAGAGCTAGACCTAGTTCCTCTAATCCTCATAA
TTAGAAGCCCACTGTGGTTCTAATCTCCTCCCTCTAATTCTCTGGCGACGATTAGCTCTGGACGGTGAAGTGTTGCCAGA
TCGCGAAGGCTGTACGCTTGGAACCAAGTAAAGAGGCCGTGTGTTCGGTCTTCTGTTTGAGGGATCGTTCGAGGGCGGTT
CGCGGGATCGTCTTCAACGGTTTGAGCGACTTCAAGTATGATCTACACTGACTCATCTACTTCCGCTGCCCTCCAGAGTC
GGTAACGATCGTCGATCCAAACCCTATATGCATATTCATATTTGTTCCTGGGTAATCGTAGGGCGAAATATTTTTGTTTT
CTACTACGTTTCGCAACAGTATAAGTTTTACTCCTCGTCGTTTCGGTGGTGTATAAGTACTCCACCATTTCGGCTCGGAG
TAAAAATTCCCCACCGCTCCGCACCCTTCTCTGCCTCTTACCCCCTCCCAAATCTTCCTCGTCAGCGACTCCCCCACCAC
TCCCGCACCCCACCACTTTAGCCATGGTCAGATTCTGCTCTCCGCCATTGATCTGACGAGCACAATACCAACGCATCCTC
CTCACGACGTCGCCAGGGTGTTGCGGCCCCATCCGGCAGGCTCACCAGCTTCCCTGACCTTCCTGCACGCGTCGCCGCCA
TAGAGGCGGTACCTTGGTGTGCGAAAGCGGGCATGGGAACGTGGGTGACAGAGATTACAGACCGAGAGACCTAGAAAAGG
ATGTGGCTCCGATCCTTCCACACCGTTGAGCTCACTGCCCACACATCTGGTATGTCCGCGGCTGCCGAAATTTTGAGTGG
GGCGAGATGTTGCTGCTCGATCCACCCCAGCCAGGGTGGTAAACGCGCAAGTGGCTCGGGAGGGTCGAGGGCGAGGGAAT
GACTCGCAGCGGAGGCTGCCGACAAGGCGTACATGGCCGACCTCCGCCGCCAGTACCCCGAGCTAGTGAAGGTGGAGAGC
CTCCTATATGAGCAACGACCGACCGGTGGGGCTAACGTCATCATCCTCTCAAGAGACGAGGAGGACGATGGTGACAGAGG
AGGTGTCAACGACGACAACTTGACATTGAAGTGTGGCAAAGTACCTTCCCCGACAGCGACAACAATGACACATGGCCTGA
CCCCATGGGCGGTGGCATGTCTAGGGCAAACAGGTTGTCCCTCGCAGTCGGAAAGCAACTAAACTTCCAGTTAGATTTAA
GTTTTAGTTTATGTTTTAGTTCAAGTTTTAGACAATTTAAACTAAACTATGTTTCACCGGATGATAATATAAATTGTGTG
TCGACTTTCGATTAAGAAGTTTGTTAAATTGAATCTATGTTCATCTTATCAAATTTGTTTCTTACTCACGAGATCAGCTA
GGTCCGATCAAAAGTTAGTGGAGTAAAATTACTTCACTAAGAACGAGGCGATTCGGTGCCTAAGCTCAGCTGCACCGCGA
TGGACAGAAAATTCACAAACAATACTAGAAAAATTCAAAAAATCCGATTTTTTTTTGCGTGGACGATAATTTGGTGTATG
ATGCGCTCCAAATTTCAGATTATTTGGACATCTGAGTAGCTTTTGATAAAAAAGACAAATTTAGGGTCTGTCAAAAAGTT
TACTATTCATGTATTATTTTGACCTATTTTGTATTTTTCTGAGAGCTACTTATATGTACAAATGATCTACAATTTAGAGC
GGACCTCATGCATCAAATTATTTTCCATGCAAATAAAAAAAACAATTTTTTACTATTTAGTGTTTGTTGTGAATTTTCTA
TAAAAAAGGGTACAAATGAGCCTGGCCTAAAAAAAAGTATATTCACCCACAAAACTTTATTCGACCGGATACTCATCTAT
TTTTTATAAGGAATTGGCTAGAGTTGCTCCAAGATAAGTGGCGGAGATAAATTACAGATCTCGACAATAAGGTGGCTGAA
AACGAAACTTAAAGCACGCGAGGGCTATTTCAGAAAAGAAC-AAAAAATGGCGTTTCGGTTAACCAAGTTCTTTGACTTA
C-------------------------------------GCTCATATTATTCGTCGTCCTCCCCTCCTCCTCCTCCCATTT
TCCGCTTTATAAAACCCCTCGGCCTCCGTCCATCCATTTCCACCTCAAATCTCAAAGTCGC------ACAACGCCACAAC
CCAAAGCACAAGGCCGCACCCA--------CCTTTCCCCGTTCTTCTCCGGCGCCGACCATGGCCGTCGACCTCATGGGT
TGCGGCTACGCCCCGTATGGCCACGCGGCCGAGGCCGAGGAGCAG---------TTCCAGGAGGCCGCTGCCGCGGGGCT
CCGCAGCCTCGAGCTCGTCATCTCCTCCTTCTCCTTCGGCGCCGGCTGCA---CGCCGCCCCTCGGAGAGATGGCCGACC
AGGCGGTGTCCAGGTTCCGCCGGGTCATCAACATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCTGTTGGA
GATGCCGCCGACTCGTTGACTCCCCCTCCTGAATCCTCTGCTCCTCCTCCGATGCCGGCCCAGGCACCGGCACCGGCACC
GGCTGTCTCGCCGCAGCTGGCGCCGCAGAAAAGCATGACGCTGGACTTCACGAAGCCTTTGAAGGCGCCGGCGGCGGCCT
CGGCTGCCGCGCCTTCGGTGACGTCGACTTCTTTCTTCTCGTCCGTGACGGCGGGGGGCGAGGGCAGCGTGTCGAAGGGC
TGGAGCCAGCTGGTGTCCTCCGGCAAGCCGCCGCTCCCGGCTGGGACCAAACGCAAGCAACGCCAACAGCAGACGCGCTG
CGCGCACT------------------CCGACGCCGCCGCCGCGGGTGGCCGGTGCCACTGCTCGAAGAAGCGCAAGAACC
GGGCGAAGTACACGACGCGCGTGCCCACAGTAACCTCGGGCGCGGCGGACATCCCCGGCGTCGGCGACAAGTACTCGTGG
CGCAAGTACGGGCAGAAGACCATCAAGGGGTCCCCTCACCCCCGCTGCTACTATAGGTGCGGCACCGTCAAGGGGTGCCC
GGCACGGAAGCACGTGGAGCGCGCCACCGACGACCCCGCCATGCTCGTCGTCACCTACGAGGGCGACCACTGCCACGACA
CTTGGCCGCCGGCCGCCGCAAATTAAAGCTCCCTGGC---------------------------TTCTAACATTTGTTCT
TTGTAATGGGGCCTTGTGTAAAGAATCCCAAATTAGGAATATAGAAGATGTTTTCATCAAGATTGGAAACGCATGTCAAT
TACGTACAAGATTCCACATTCCACAGCCTTGGTGTTGGACCTCGCCGCCGAGGGCAATTCTGGCGGCGTGGTGGTCATGA
GCACGA----CAGTCTTCCTCACCTACCTCCATCCGGCCGCCTTGTGAGGCCCCTGGAGACAATCACAAGCAACAATGGA
GGTAGGTGGGAGATTTGGGATGAGCAGGATAGAGAGGCAAGGGGAGAACGAGAGAGGGGAGACAGATTTAGACGTTTTCC
ATCTCATTAGCTGTCGAGCACACGCGGTCAGAGTTTAAGTAA--------------------------------------
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>chr5A_730
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-------------------------------------------------CTAAATTTTACTCGGTCGGATACTCCTCTAT
TTTTC-TAAGGGATGGGCTAAAGTTGCTCCAAAATAAGTGGCAGACATAAATTACAGATCTCGACAATAAGGTAGCTGGA
AACGAAACTTGAATCACGCGAGGGCTATTTCAGAAAGGACCAAAAAAATGGCGTTTCAGCTAACCAAATCCTTTGACCTA
CGCTCAT-------------------------------------ATTATTCCTCGCCCTCCC---CTCCTCCTCCCATTT
TCCGCTTTATAAAACCCCTCGGCCTCCGTCCATCCATTTCCACCTCAAATCTCAAAGTCGC------ACAACGCCACAAG
CCAAAGCACAAGGCCGCACCCA--------CCTTTCCCCGTTCTTCTCCGGCGCCGACCATGGCCGTCGAACTCATGGGT
TGCGGCTACGCCCCACACGGCCACGCGGCCGAGGCCGAGGAGCAG---------TTCCAGGAGGCCGCTGCCGCGGGGCT
CCTCAGCCTCGAGCTCATCATCTCCTCCTTCTCCTCCCGCGCCGGCTGCG---CGCCGCCCCTCGGAGAGATGGCCGACC
AGGCGGTGTCCAGGTTCCGCCGGGTCATCAACATCCTCGACCGCACCGGCCACGCCCGCTTCCGCCGCGGCCCTGTTGGC
GCTGACGCCGACTCGTTGACCCCCCCTCCTGTCTCCTCTGCCCCTCCTCCGATGCCGGCCCAGGCACCG------ACACC
GGCTGTCTCGCCGCAGCTGGCGCCGCAGAAAAGCATGACGCTGGACTTCACGAAGCCTTTGAAGGCGCCGGCGGCGGCCT
CGGTTGCCGCGCCTTCGGTGACGTCGACGTCTTTCTTCTCGTCCGTGACGGCGGGGGGCGAGGGCAGCGTGTCGAAGGGC
TGGAGCCAGCTGGTGTCCTCCGGCAAGCCGCCGCTCCCGGCTGGGACCAAACGCAAGCAACGCCAACAGCAGACGCGCTG
CGCGCACT------------------CCGACGCCGCCGCC---GGTGGCCGGTGCCACTGCTCGAAGAAGCGCAAGAACC
GGGTGAAGTACACGACACGCGTGCCCACGGTAACCTCGGGCGCGGCGGACATCCCCGGCGTCGGCGACAAGTACTCGTGG
CGCAAGTACGGGCAGAAGACCATCAAGGGGTCCCCTCACCCCCGCTGCTACTACAGGTGCGGCACCGTCAAGGGCTGCCC
GGCGCGGAAGCACGTGGAGCGCGCCACCGACGACCCCGCCATGCTCGTCGTCACCTACGAGGGCGACCACTGCCACGACA
CTTGGCCGCCGGCCGCCGCAAATTGAAGCTCCCCGGCAGCGACAT-------GGCTCGATGTGCTTCTTCCATTTGTTCT
TTGTAACGGGGGCTTGTGTAAAGGATCCAAAATTAGGAATATAGAAGATGTTTTCATCAAGATTGGAAACGCATGTCAAT
TACGTA-AAGATTCCACAGA-----------GTGTTGGACCTCGCCGCCAAGGGCAATTCTGGCGGGGTGGTGGTCATGA
GCACGAACGACAGTCTTCGTCACCTACCTCCGTCCGGCCGCCTTGTGAGG-CCCTGGAGACAATCACAAGCAACAATGGA
GGTAGGTGGGAGATTTGGGATGAGCAGGATAGAGAGGAAGGGGGAGAAGGGGAGAAGGGAGACAGATTTAGACGTTTTCC
ATCTCATTAACTGTCGAGCACACACGGTCAGAGTTTAAGTAATCCACACCAGCGACACGTGGGCCCACTCACATGGCACG
CAGGCTGCTGGTAGCTGGTCTGACTCTTTTCTTTATATA-----------------------------------------
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>chr5A_1001
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------TTATAAAACCCCTCGGCCTCCGTCCATCCATTTCCAC-TCAAATCTCGAAGTCATACTTGTACAACCAAGCCGA
GAACCGCCGCGAGCAGCAGCCAGGACCGCGCCTTTCCCCGTCC-TCTCCGGCGCCGACCATGGCCGTCGACTTCGTGGGA
CGCGGCCACGCCCCCCGTGGCCTCGCCCTCGCGGGCGGGAAGCAGCAGCTGGCCTTCCACGAGGCCGCCGCGGCGGGGCT
CAGCAGCCTCGAGCTCCTCGTCTCGGCGCTCTCCCCGCGCGCCGACTGCGCGCCGCCGCCGCTCGGGGAGATCGCCGACC
AAGCGTTATCGGGGTTCCGCCGGGTCGTCGACGTCCTCGGCCGCACCGGTCACGCCCGCTTCCGCCGCGGCCCTGCTGGA
GCTGCCGCCGCCTCGTTGACTCCCCCTCCTGCCTCTTCTTCACCTCCT---ATGCCGGCCCGGCCACCG------GCGCC
GGCAGCCTCGCAGCACCTGGCAACCCAGAAAAGCCTGACGCTGGACTTCACCAAGCCTTCGAAGGCGCCGGCAGCGGCA-
-----GCCGCTGCTTCGGTGACGTCGACGTCTTTCTTCTCGTCGGTGACGGCGGGGGGCGAGGGCACCGTGTCCAAGGGC
CCGAGCCAGCTGGTGTCCTCCGGAAAGCCGCCGCTCGCGGCTGGTACCAAACGCAAGCAACAGCAGCAGCAGACGCCCTG
CGCGAGCGGCGCGCACTCCGACGTC------GCCGCCGCC---AGTGGCCGGTGCCACTGCTCCAAGAAGCGCAAGCACC
GGGTGAAGTACACGACGCGCGTGCCCGCGGTGAGCTCGCGCACGGCGGACATCCC------CGGCGACGACTACTCGTGG
CGCAAGTACGGGCAGAAGCCCATCAAGGGGTCCCCTTACCCCCGCTGCTACTATAGGTGCAGCACCGCCAAGGGCTGCCC
TGCGCGGAAGCACGTGGAACGCGCCACCGACGACCCCGCCATGCTCGTCGTCACCTACGAGGGCGACCACCGCCATGACA
CTTCGCCGCCGGCCGCCGCAAATTAAAGTTCCCTGGCAGCGGCATCGAC-------------------------------
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>chr5B_1001
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------TTATAAAACCCCTCGGCCTCCGTCCATCCATTTGCACCTCAAATCTCAAAGTCAC------ACAACCAAGCCGA
GAACCGCCGCGTGCAGCAGCCAGGGCCGCGCCTTTCCCCGTCCTTCTCCGGCGCCGACCATGGCCGTCGACTTCGTGGGA
CGCGGCCACGCCCCCCGTGGCCTCGCCCTGGCGGGCGGGCAGCAGCAGCTGGCCTTCCACGAGGCCGCCGCGGCGGGGCT
CAGCAGCCTCGAGCTCCTCGTCTCGGCGCTCTCCCCCCGCGCTGACTGCGCACCGCCGCCGCTCGGGGAGATCGCCGACC
AAGCGTTATCGGGGTTCCGCCGGGTCATCGACATCCTCGGCCGCACCGGTCACGCCCGCTTCCGCCGCGGCCCTGTTGGA
GGAGGCGCCGCCTCGTTGACTCCCCCTCCTGTCTCTTCTCCTCCT---CGGATGCCGGCCCGGCCACCG------GCACC
GGCAGCCTCGCAGCAGTTGGCGCCCCAGAAAAGCCTGACGCTGGACTTCACCAAGCCTTCGAAGACGCCGGCAGCGGCA-
-----GCCGCTGCTTCGGTGACGTCGACGTCTTTCTTCTCGTCGGTGACGGCGGGGGGCGAGGGCAGCGTCTCCAAGGGC
CCGAGCCAGCTGGTGTCCTCCGGAAAGCCGCCGCTCGCGGCTGGCACCAAACGCAAGCAACAGCAGCAGCAGACGCCCTG
CGCGAGCGCCGCGCACTCCGAT---GCCGCTGCCGCCGCC---GGTGGCCGGTGCCACTGCTCGAAGAAGCGCAAGCACC
GGGTGAAATACACCACGCGCGTGCCCGCGGTAAGCTCGCGCACGGCGGACATCCC------CGGCGACGACTACTCGTGG
CGCAAGTACGGGCAGAAGCCCATCAAGGGGTCCCCTTACCCCCGCTGCTACTATAGGTGCAGCACCGCCAAGGGCTGCCC
GGCGCGGAAGCACGTCGAACGCGCCACCGACGACCCCGCCATGCTCATCGTCACCTACGAGGGTGACCACCGCCACGACA
CTTTGCCGCCGGCCGCCGCAAATTGAAGCTCCCTGGCAGCGACAGCCGACAGGACTGGATGTG-TTCTTCCGTTTGTTCT
TTGTACACG-----------------------------------------------------------------------
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>chr5D_1002
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-------TATAAAACCCCTCGGCCTCCGTCCATCCATTTGCACCTCAAATCTCAAAGTCAC------ACAACCAAGCCGA
GAACCGCCGCGAGCAGCAGCCAGGGCCGCGCCTTTCCCCGTCCTTCTCCGGCGCCGACCATGGCCGTCGACTTCGTGGGA
CGCGGCTACGCCCCACGTGGCCTCGCCCTCGCGGGCGGGGAGCAGCAGCTGGCCTTCCACGAGGCCGCCGCGGCGGGGCT
CAGCAGCCTCGAGCTCCTCGTCGCGTCGCTCTCCCCCCGCGCCGACTGCGCGCCGCCGCCGCTCGGGGAGATCGCCGACC
AAGCGTTATCGGGGTTCCGCCGGGTCATCGACATCCTCGGCCGCAGCGGCCACGCCCGCTTCCGCCGCGGCCCTGTTGGA
GGAGGCGCCGCCTCGTTGACTCCCCCTCCTGTCTCTTCTCCTCCT---CGGATGCCGGCCCGGCCACCG------GCACC
GGCAGCCTCGCAGCAGTTGGCGCCCCAGAAAAGCCTGACGCTGGACTTCACCAAGCCTTCGAAGGCGCCGGCAGCGGCA-
-----GCCGCTGCTTCGGTGACGTCGACGTCTTTCTTCTCGTCGGTGACGGCGGGGGGCGAGGGCAGCGTCTCCAAGGGC
CCGGGCCAGCTGGTGTCCTCCGGAAAGCCGCCGCTCGCGGCTGGTACCAAACGCAAGCAACAGCAGCAGCAGACGCCCTG
CGCGAGCGGCGCGCACTCCGACGTCGCCGCCGCCGCCGCC---GGTGGCCGGTGCCACTGCTCGAAGAAGCGCAAGCACC
GGGTGAAGTACACCACGCGCGTGCCCGCGGTAAGCTCGCGCACGGCGGACATCCC------CGGCGACGACTACTCGTGG
CGCAAGTACGGGCAGAAGCCCATCAAGGGGTCCCCTTACCCCCGCTGCTACTATAGGTGCAGCACCGCCAAGGGCTGCCC
GGCGCGGAAGCACGTCGAACGCGCCACCGACGACCCCGCCATGCTCATCGTCACCTACGAGGGTGACCACCGCCACGACA
CTTTGCCGCCGGCCGCCGCAAATTGAAGCTCCCTGGCAGCGACAGCCGACAGGACTGGATGTG-CTCTTGCATTTGTTCT
TTGTACACGG----------------------------------------------------------------------
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---
>SNPs
SSSSS--------S-S-S-----S---SS---------------SS----S--SSSSSSS-SS-SS---SSSSSS-SSSS
-----------------------------SS-SS--------S-----S-----SS--S--------SS----S------
-----S---------------------------S--S---SS--SSSSS------SS-S-----S------S-SS--S--
--S-------S---SS---------S-S--S---S-S-----S-SS-----------S---------S---SS-------
--S-----S---------------------------------S------S----------S---------------S---
--SSSSSSS----------------------S-SS-SS-----SS-S----SSSSSSSSSSSSSSSSS------S-----
S-----------SSS--SSS---S-S--------SS------S-SS-S-S---S-S-------S--S----S--------
----------S-S-S------S------S--------S-----------S--SS--SS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSS------S----S-------SS----------------------------------------------------
-S---------S-SS--S-------------------------------S-S---S---S--S-----------------
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------------------------------------------------------S-------S---S------S--S---
--------------S--------------------------------------------------------S--------
--------------------------------------------------------------------------------
S--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
----------------------------------S--------------------------------------------S
-------------------------------------------------------------S------------------
----S---------------------------------------------------------------------------
------------------------------------------S-------------------S---S-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------------------------------------------S----
-------S--SSSSSSSS--------------------------------------------S-----------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S----S---------------------------
-----------S------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_370
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------------------------------TCTTGTGGGTGTCATGGTCG------------------------------
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---
>reverse_5183
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--------------------------------------------------------------TGAAAAAGCGCAAGAACC
GG------------------------------------------------------------------------------
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---
>forward_463
--------------------------------------------------------------------------------
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-------------------------------------------GAGAAGGTTGGGGAAGTCGG-----------------
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>reverse_5618
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-----------------TTTCACAGCCTTGGTGTTGG-------------------------------------------
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---
