>input_sequence_60859
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---------------------------------------------------ACGCCGCTCGTGCGTCCCACCTGCACACC
CCCAGCACGCCTGAGCGAGCGAGGGAGGGAGGGATGGACTGGTACGAGTGGCTGCGCAGGGCGGGGCTGGGCGAGGACCT
GGCCGCCGAGTACGCGCTCCTGTTCGCGCGCAACGAGCTCGGCGCCGCCGACGTGCGCCACCTCGACCACGCCTTCCTCG
CCACCATGGGCGTCGCCGTCGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCCCGGAGGGAGTCCTCCGCCTCCGCCGCC
ATCACCGTCCTGCCGTGGCGCGCCACCAGGCTGCTCGCCGCCGCCGCGCAGCGGTCGGCCCGCTCCCTCGCCGGCTGCCT
CCGCTCCGCCGCGCGCCGGGGCAGGTCCAAGGCCGCCGTCGCGCCGCGCCCGCTGGCGCTCTGCCACCAGGGCGTGGCGG
GGCCGGCGCGGTGGAAGGGCGCGCCCACGGCCGCGGACGGCCGCGGGGTCACGAAGAGGAAGCTGGCGGCCCTCCTGGCT
CGCGTGGGCAAGCCCATGCACACGCTCACCAACAGCGCCGGACGAAAGGGGACAAGGAACTC---------CGCGGCGCC
GACGACGTACATGGCCACGGCGATCGCGGCGGGGTGCTTCACCAGCACGGAGACCTGCGGCAGCGACTACGACGCCGACG
ACGACGAGGACGAGGACGCCGAGACGGACGACGGCGGCGGCGAGGACCCGGAGACGCCGTGGGAGTCCATGTTCGAGGAT
CTGAAGCCCACCTAGGCGAGCCGCGCATGCGTGCGTCAGAAAAAGACACGTCCATCCATCCATCCAATCCATCAACGGCG
CACCGGCCAGCCAGTGGCTCAGTGGTGGTCACTGCACTGCACTGCACTACTAACCGCTCGCCAGTGGCGCCGCTGCTACG
TCTGTAAGACTGT------GTATACTTCCGCGCCCTGTAAAATCTTGTGTCGTGTGTTTAATCTACCACTAACAGCGTTG
CAATGCATATTTGAGCTCATTTTGTTTGATTTTGAGCATATTTGA--------------GTAGAGTAGCATTTTGTTGTT
TTTGCTTTAAATAGTGAGCAGTACTACATGGTATTGGATGTAGCACATTAATACA-------------------------
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>chr7A_1_TraesCS7A01G141900
TTTCTAATATAGAACTTTCAGAGCAATACAAGATTTCGAACCAATGGATTAAGCCAGATTAAACTTGTATCGGCACCAAT
AAAGGCAGCAAGAGATTTGTGTTAACAACGTAAATACAAATTACTCACATGTTCGAACTCATCGCCCCGCCGAAATAAGG
ATCCATGTCGCAGCCGCCGCAAATTAGACCTCCCCAAGCCGCCAGACGTCAAGTTAGGTCACATCGACCCGTGCTGGGAA
GCCGGTGATTTTGAGATTTTATCGGGCCCATGTGCTATCGATACCGTATTGCTCCCTAGACAATTTTTTCTGTACACGTT
GGCCGTCGAATACAACACGAATCTCGTTACTTCATCCTGCGAGAGCAACGTACCCGGTAAAAACCGGTTCCGCTATAATT
TCATTTCTCCACGAGAGCGGCAGTGTGGGGCAAAATTTCGTGTTTTGATCCTTTTGTGAAAGTTAATCGAGATTTGACCT
TAGTTTGTAAAAAATTTAAGATCTGACCCTTTTGCTACCGTCGGGATCCATGGCGGTAGGAAACAACCCTACCGCCAAAC
AGGCTGGCGGTAGGCTGTACAACCTTACTGCCAAGGTGCCCGGCAGCAGGCACGAGTACACACTGTGTTTCATACTTAGG
GAAAATTTACGGTAGGGTGTTAGGCTGTATGTTGTTATAACCTACCACCATGGGCCTTGGCGGTAAGAAAATGGCCAGAT
CCCGGAATTTTTGCAACCTAGGATCAAATCTCGATTAAATTTCACAAAAGCATCAAAACACGAAATTTAGCCGCGGTGTG
GCACACCGTTGCCGGCAAACCAGATCCACCCTCACGCTCGCTCCCCTCCAACCGTCCACCAACCTCCTCCCCCCAATCAT
GCTCACACCACGACGCACCTTCGCACATCGCTCCACACCAGTCA-------CCAGCAGCCAGCCATTTCCCCTGCTCCTG
TGCTAGCTACTAGCT----TTGTACTAAACCCTCGTCCCGTGCACGCCGTCACGCCGCTCGTGCGTCCCACCTGCACACC
CCCAGCACGCCTGAGCGAGCGAGGGAGGGAGGGATGGACTGGTACGAGTGGCTGCGCAGGGCGGGGCTGGGCGAGGACCT
GGCCGCCGAGTACGCGCTCCTGTTCGCGCGCAACGAGCTCGGCGCCGCCGACGTGCGCCACCTCGACCACGCCTTCCTCG
CCACCATGGGCGTCGCCGTCGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCCCGGAGGGAGTCCTCCGCCTCCGCCGCC
ATCACCGTCCTGCCGTGGCGCGCCACCAGGCTGCTCGCCGCCGCCGCGCAGCGGTCGGCCCGCTCCCTCGCCGGCTGCCT
CCGCTCCGCCGCGCGCCGGGGCAGGTCCAAGGCCGCCGTCGCGCCGCGCCCGCTGGCGCTCTGCCACCAGGGCGTGGCGG
GGCCGGCGCGGTGGAAGGGCGCGCCCACGGCCGCGGACGGCCGCGGGGTCACGAAGAGGAAGCTGGCGGCCCTCCTGGCT
CGCGTGGGCAAGCCCATGCACACGCTCACCAACAGCGCCGGACGAAAGGGGACAAGGAACTC---------CGCGGCGCC
GACGACGTACATGGCCACGGCGATCGCGGCGGGGTGCTTCACCAGCACGGAGACCTGCGGCAGCGACTACGACGCCGACG
ACGACGAGGACGAGGACGCCGAGACGGACGACGGCGGCGGCGAGGACCCGGAGACGCCGTGGGAGTCCATGTTCGAGGAT
CTGAAGCCCACCTAGGCGAGCCGCGCATGCGTGCGTCAGAAAAAGACACGTCCATCCATCCATCCAATCCATCAACGGCG
CACCGGCCAGCCAGTGGCTCAGTGGTGGTCACTGCACTGCACTGCACTACTAACCGCTCGCCAGTGGCGCCGCTGCTACG
TCTGTAAGACTGT------GTATACTTCCGCGCCCTGTAAAATCTTGTGTCGTGTGTTTAATCTACCACTAACAGCGTTG
CAATGCATATTTGAGCTCATTTTGTTTGATTTTGAGCATATTTGA--------------GTAGAGTAGCATTTTGTTGTT
TTTGCTTTAAATAGTGAGCAGTACTACATGGTATTGGATGTAGCACATTAATACAGTTATAAGTGTGGTTTTAAGTAC-G
AGCAAGAGCATCTGCCAAGGACAACTGTATGAGTATAGGGCCAACAGTATTATTGATAGTGTGATCTACCCATGTTCACA
CGCAAAACA----------AGCCGGGGGGTGGCGACAAACGGAAAGTTCAGATCTGAGCAATTTGGCACTGTGTTGACTA
GTGCATCGGTTATTGGTTGAGTGGACGAAAGGCACTGACAGTCTTTTCATCCATCGAGGCAGGCAACGCCTCGTGCTGCG
CAGAGATAGATCTTACCGGCTTCGGTGAAGTTTTTTTAGCGAGAGAGATCTGCCGGCATCCCTGCCGCTT-ACTACGTGT
CCTACTCTGAG--------------TGTCTCTTGAAATACAAAATAATCACAGTAAGGACTAAATGTAGGGAGGAGGGTT
TGGAGCACGGACCAGGATCGTCTGACGTACTGCACCCCTGACGTGGGGTCACTGATGTGTGGGCCCGGAGCCACCTGTCA
GTGTGCCAACGACACGTCAGGGGAGCCGCGTCCTTGGAGCACTCGGGTGGGCGATCTTTTTCTCTTCTTCCTATGGAAGA
AGGAGGACCCTTTGGCTAGGGTTTCTCATGCCTCCCGTCGGTGCCGCTGTTGGTCTACATCGTCTCATGTGGTTTTA-GG
TCATAGAAGGCATGGTGGATCCCGGCCCTTGCTGGGGAGGGGGGGTTATTTTTTCATACTTTTC---TGAGTTTTGTTAG
GGTTTGTATTTTGCTTAGAGAGGCGAGGCAGCGACAGCTCTCTGAAGAAGGAATAAAGTTCTCCCCACCTAATGCTCGCT
CCGGTGGTGTTTCTAGCAACATCGGAAGACGTGTGGAGGTTTCTTTTCGGCGGATCTCACGGGATTCAGACAGTGCTTGT
CTTTGGTGGATCCACGTGGATCATGTCTTCGTTCGTCTGTGTTCGTGTGTCTAAAGGTTGGATCATTCCGATCTACACTT
CTCTTCATCGGCAGCGGTTGCTGTTTTGGTGCCCTGGTCCTTTCG
>chr7B_789
AGCGGCA-------------------------------------------------------------------------
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---------------------------------------------------------------------------GTGTG
GCACACCATTGCCGGCAAACCAGATCCACCCTCGCTCTCGCTCCCCTCCAACCGTCCACCAACCTCCTCCCCGCAATCAT
GCTCACATCACGACGCACCTTCGCACATCGCTCCACACCCGTCA-------CCAGCAGCCAGCCATTTCCCCTGCTACGG
TG-------CTAGCT----TTGTACTAAACCCTCGTCCCGTGCACACCGTCACGCCGCTCGTGCGTCCCACCAGCACACC
TGAGCGAGC-------GAGGGAGGGAGGGAGGGATGGACTGGTACGAGTGGCTGCGCAGGACGGGGCTCGGCGAGGACCT
GTCCGCCGAGTACGCGCTCCTCTTCGCGCGCAACGAGCTCGGCGCCGCCGACGTCCGCCACCTCGACCACGCCTTCCTCG
CCACCATGGGCGTCGCCGTCGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCCCGGAAGGAGTCCTCCGCCTCGGCCGCC
ATCACCGTCCTGCCGTGGCGCGCCACCAGGCTGCTCGCCGCGGCCGCGCAGCGGTCCGCGCGGTCCCTGGCCGGCTGCCT
CCGCTCGGCCGCGCGCCGGGGCAGGTCCAAGGCCGCCGTCGCGCCGCGCCCGCTGGCGCTCTGCCACCAGGGCGTGGCGG
GGCCGGCGCGGTGGAAGGGCGCGCCGACGGCCGCGGACGGCCGGGGGGTCACGAAGAGGAAGTTGGCGGCTCTCCTGACG
CGCGTGGGCAAGCCCATGCACACGCTCACGAACAGCGCCG---GAAAGGGGGCAAAGAACTC---------CGCGGCGCC
CACGACGTACATGGCCACGGCGATCGCGGCCGGGTGCTTCGCGAGCAAGGAGACCTGCGGCAGCGACTACGACGCCGACG
ACGACGAGGACGAGGACGCCGAGATGGACGACGGCGACGGCGAGGATCCGGAGACGCCATGGGAGTCCATGTTCCAGGAT
CTGAATCCCACCTAGGTGAGCCGCGCATGCGTGCGTCAGAAAAAGACACGTCCGTCCACCCATCCACGCACGGT-----G
CACCGGCCGGCCAGTGGCTCAGTGGTGGTCACTGCACT----------ACTAACCACTCGCCAGCGGCGCCGCTGCTACG
TCTGTAAGACTGTAAGACTGTATACATGTGTGTCCTGTAAAATCTTGTGTTGTGTGTTTAATTTACCACTAACAGCGTTG
CAATGCATATTTGAGCTCATTTTGTTTGATTTTGAGCATATTTGA--------------GTAG-----CATTTTGTTGCT
TTTGCTTTAA-TAGTGAGCAG---TACATGGTATTGGATGTAGCGCATTAATACAGTTATAAGTGTGGTTTTAAGTACCG
AGTAAGAGCATCTGCCAAGGACAACTGGC------TAGGGCCAACAGTATTATTGATAGTGTCATCTACCCATGTTCACA
CGCAAAACAGAGCAAAACAAGCTCGA--GTGGCGACAAACGGAAAGTTCAGATCTGAGCAATTTGGCATTGTGTTGACTA
GTGCATCTTTCATTGGTTGAGTGGACGAAAGGCACTGACAGTCTTTTCATCCATCGAGGCAGGCAACACCTCGTGCTGTG
CGAAGATAGATCTTACCGGCTTCGGTGAAG-TTTTTTAGCAAGACAGATCTGCCGGCATCCGTGCCGCTT-AGCTGGCCA
G---CTCTGCTTGATTTTGAACGACTGTCTATTGAAATACAAAAAATCACTGGTAAGGACAAAAT---------------
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>chr7D_800
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-------------------------------------------------------------------------------G
GCACACCGTTGCCGGCAAACCAGATCCACCCTCGCGCTCGCTCCCCTCCAACCATCCACCAACCTCCTCCCCCCAATCAT
GCTCACATCAGGACGCACCTTCGTACATCGCTCCACACTAGCCACCAGCAGCCAGCAGCCAGCCATTTCCCCTGCTACTG
TG-------CTAGCATAGCTTGTACTAAACCCTCGTCCCGTGCACACCGTCACGCCGCTCGTGCGTCCCACCTACACACC
TGAGCTAGG-------GAGCGAGCGAGGGAGGGATGGACTGGTACGAGTGGCTGCGCAGGGCGGGGCTCGGCGAGGACCT
GGCCGCCGAGTACGCGCTCCTCTTCGCGCGCAACGAGCTCGGCGCCGCCGACGTCCGCCACCTCGACCACGCCTTCCTCG
CCACCATGGGCGTCGCCGTCGCCAAGCACCGCCTCGAGATCCTCAAGCTCGCCCGGAAGGAGTCCTCCGCCTCGGCCGCC
ATCACCGTCCTGCCGTGGCGCGCCACCAGGCTGCTCGCCGCGGCCGCGCAGCGGTCCGCGCGCTCCCTGGCCGGCTGCCT
CCGCTCGGCCGCGCGCCGGGGCAGGTCCAAGGCCGCCGTCGCGCCGCGCCCGCTGGCGCTCTGCCACCAGGGCGTGGCAG
GGCCGGCGCGGTGGAAGGGCGCGCCGACGGCCGCGGACGGCCGGGAGGTCACGAAGAGGAAGCTGGCGGCTCTCCTGACG
CGCGTGGGCAAGCCCATGCACACTCTCACGAACAGCGCCC---AAAAGCCAACAACGAAGAAAGGCGCCGTCGCGTCGCC
GACGACGTACATGGCCACGGCGATCGTGGCCGGGTGCTTCGCGAGCACGGAGACCTGCGACAGCGACTACGACGCCGACG
ACGATGAGGACGAGGACGCCGAGATGGGCGACGGCGGCGGCGAGGACCCGGAGACGCCGTGGGAGTCCATGTTCCAGGAT
CTGAATCCCACCTAGGCGAGCCGCGCATGCGTGCGTCAGAAAAAGACACGTCCATCCATCCATCCAT----GGT-----G
CACCGGCCGGCCAGTGGCTCAGTGGTGGTCACTGCACT----------ACTAACCACTCGCCAGTGGCGCCGCTGCTACG
TCTGTAAGACTGT------GTATACATGTGCGTCCTGTAAAATCTTGTGTTGTGTGTTTAATCTACCACTAACAGCGTTG
CAATGCATATTTGAGCTCATTTTGTTTGAGCCCCTTCTTGATTCTGAAGCTAGGATCCTGTAG-----CATTTTGTTGCT
TATGCTTTA------------------ATGGTATTGGATGTAGCACATTAATACAGTCGTGAGTGTGGTTTTAAGTA-CG
AGTAAGAGCATCTGCCAAGGACAACTGGC------TAGGGCCAACAGTATTATTGATAGTGTGATCTACCCATGTTCACA
CGCAAAACAGAGCAAAACAAGCCGGGGGGTGGCGACAAACGGAAAGTTCAGATCTGAGCAATTTGGCACTGTGTTGACTA
GTGCATCATTCATTGGTTGAGTGGACGAAAGGTACTGACAGTCTTTTCATCCATCGAGGCAGGCAACACCTCGTGCTGTG
CAAAGATAGATCT-ACCGGCCTCGGTGAAG-TTTTTTAGCGAGAGAGATGTGCCGGCATCCGTGCCGCTTTACTACGTGT
CCTACTCTGCTTGATTTTGAACGTCTGTCTCTTGAAATGCAAAATAATCACAGTAAGGACTAAATGTAGGGAGGAGGAT-
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---------------------------------TTGGAGCACTCGGGTGGGCGATCGTTTTCT-TTCTTCCTACGGAAGA
AGGAGGATCCTTTGGCTAGGGTTTCTCGTGCCTCCCGTCGGTGCCGTCGCCGGTCTACCTCGTCTCATGTTGTTTTGGGG
CCATAGGAGGCGTGGTGGATACCGGCCCTTGCCGGCGGGAGGTCTTTGTTTTTTCATATTTTTTTTTTGAGTTTTTTTAG
GGTTTGTGTTCTGCTTAGAGAGGCGAGGCGGCAACAGCTCTCTGAAGAAGGTATAAAGTTCTCCCCACCTAGTCCTTGTC
CCGGTGGTGTTTCTAGCATCATCGGAGGACGTGTGGAGATTTGTTTTCGACGGATCTCACGGGATTAGGTCGGTGTTTGT
CTTTGGTGGATCCACATGGATCATGTCTTCGTTCGTCTGTGTTCGTGTATCTACAGGTTGGATCCTTCCGATCTACGCTT
CTCTTTATCGGCGGCAGTTGCTGTTCTGGTGTGTTGGTCCTTTCG
>SNPs
SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---------------------------------S----------------------------------------------
-------S--------------------------------------------------------------------S---
--SSSSSSS------------------------------------S----------------------------------
SSSSSS-S-SSSSSSS----------------------------------------------------S-----------
---------------------S--------------------------------S-------------------------
---------------------------------------------------------S---------------S------
-----------------------------------------S--------------S--S--------S-----------
------S-------------------------------------------------------------------------
-------------------------S-----------------S--------------------------S------S-S
-----------------------------S----------SSS------------S------------------------
------------------------------S---------S-S-------------------------------------
------------------------S-------------------------------------------------S-----
-----S------------------------------------------------------------SS-SSSSSSSSSS-
--------S-----------------------------SSSSSSSSSS-------S------------------------
-------------------------S-SS---S-----------------S-----------------------------
---------------------------------------------------------------SSSSS----------S-
----------S----------SSS--------------------------------------------------------
--S------------------------SSSSSSSS---------------------------------------------
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-------SS-S--------------------------------------------------------S----------S-
--S---------------------------S------------------------------S------------------
---------SS------------------------------------------------------------------S-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S------S---------S------
-------S-------------------S------------------SS-SS-------S-----------S-----S---
S-----S----S--------S-----------S--S-S-S--SSS--S----------S----S-----------S----
-------S--S------------------S--S------------------S-------------------S-S--S-SS
------------------S-------S-----------S---S------S----------------SS-S-S---S----
---------------S--------------------------------S----S----------S-----------S---
-----S------S--S---------S-----SSS-----------
>forward_626
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----------------------------------------------CAGGCACGAGTACACACTGT--------------
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>reverse_1946
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-------------------------TTCCGCGCCCTGTAAAATCT-----------------------------------
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>forward_627
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-----------------------------------------------AGGCACGAGTACACACTGTG-------------
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>reverse_1948
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---------------------------CCGCGCCCTGTAAAATCTTG---------------------------------
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>forward_834
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--------------GCAAACCAGATCCACCCTCA----------------------------------------------
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>reverse_2577
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----------------ATCGTCTGACGTACTGCACC--------------------------------------------
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