>input_sequence_60839
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------------------------------------------CTATATATACCCCCTTGATCTCGCCCTCCCTTGCTCCA
TCAATCACACTGCTACTTATTCATTAGTTTGCATCTTCCATCTCCTGAACTCCACATCGTCCCGGTGCTAGCTCGACCAA
TTGCATCATCTATCGTTTGTTTTCCCTCAATCTCTAAGCCGATAGAGAGGTGAGAGTTTGAGGGGTAGGTCGGCCGACCG
GAGGGGCTGTGGACCATGTCTGGCGTGTGGGTGTTCAAGAACGGGGTGGTGCGCCTGGTGGAGAACCCGGGGAGCGAGCG
GACGTCGACGGTGCGGCGGAAGGCGCTGCTGCACACGCCGAGCGGGCAGGTGGTGTCGTCCTACGCGACGCTGGAGGCGA
AGCTGACGGCGCTGGGGTGGGAGCGCTACTACGAGGACCCGGCGCTGTATCAGTTCCACAAGCGCGGCTGCCTCGACCTC
ATCTCCCTCCCCAGGGACTTCAACCACTTCTCCTCCGTCCACATGTACGACGTCGTCATCAAGAACAGGGAGTCCTTCCG
CGTCGTCGACGCCTAGCCAGCCCTCTTCCGTCCATGCAGTCTCTCGATCTCGTCTCGTCTGTTCAGCTATAGCTCTTC--
-CATCGTTTGACTTGATTTGCCATGCAGGGTTTGTTGTT---AGTGATCGGGATGTTATATACGATTGGTTGTGCCTAAT
TTGGTTGGGAAGTGTAGTGTGGTAGTGGAGTGAGCGAGGGTACTGTTTTTGCACACATATGTGCGCGTGGTGCCTGAGTA
TATGCATAGGTTTTCGTTGTGGTGTGTATATGTATGCGTGCTGTGGGGTGTGTAAGATCTCTGTTTTGATGTAAATTAGT
GTCCGCGTGATGAC--TATATATCCATTTACGTTCATTTGCACGTTTCTCTGCATGCACATGCATGATGCATGGCACCAG
CCATGTCCTGAACTTGTTGCATGCATATATGGGTATGACTATGTCACATCTAGATGTGTGATAATATCTCACATCTAAAT
TGACTTCTTCATCTGTTT-GTGGCCTCCTCCACTTGTTTTCTTTGTATTTTTTTAACAG---TATATACACAAGAAAGGT
ACC--ATGATTCCCGTACAGCTACAGGCTCA-------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr3B_1_TraesCS3B01G205800
TGGCTAGCTAGCTAGGAAG-TTAAGATAAGCCACAAATTTCTCTCTGCTGCATGCAGCAGATGCTTGAGAGCTTGTGAGT
TACTATTAGGGACAAAGCTAGCAGGCAAAAGTAAATTCCACCATGCCGTACACAAAATATATACTTGACAATGAGAGAGA
GCATCAATTTTGTTCTCGGCAAAGGCAACATTGGCTTGATCGACCGGCCAGAAATTCCCTTTCGTGGAAAAAACAATGCT
GCAAGAGGTGCGCAAAGATAGCTCTCATATTTCTTATTGTTTAAGTAAAGTCGAAAACTGTATGGCGAGTGAATCCTATT
CCCCTGAGAATTAGGCTAGCTCTTTTTGTTTTCCTTTCAGGAAAAAGGTGGGTGGGATTCCTCGCACAACATCACATTCT
TTCTTTTCAATTTTCCATATGGGAATGCTCAAGCCATAGATTACGCATGAATTATATGTGGATCTCCCTATTGGCAATTA
ACCAACGCCATCAGTTAATGTCCTGTTTTTGACGTGTCGCGGGGCGGCCGCGACACATGTCAAATTTCGTGACCTCATGA
TGATCAATCACCTCATGCACTACGTAATTCTGG-AAAATAACAATATGCATAGCATATAGCTACCTTTTTTAGCTACCTA
GCTAGCTAGAATTTCTTTCTTTCTTCCAACAAATATATTCCAGGTAGCTTATCAAGAACATAAGCTAGCTAGGCACATAT
ATTCTCCCGCGCGCACTACTCAAGTTTAATGAACGTACCATATATTCTGCTTCTCTCCCATCCCTGTGCATGCAGCCAGC
TACAGCATCTTCCTGACCTAACCTAGCTAGAAACTAAAGACGCCCTTCTCTTCTCTGGTGCATGCACGCGTATATCGACG
TACTAATCACTAGCAGTATAGTATCGCGGTCGCATAAGAAATCTATGTCCTGCGGCTGTCCCCCGTATACATGTCACCTC
TACCCCACACCATCGATAAGCTAGCTTCATCCACATCCACCTCTATATATACCCCCTTGATCTCGCCCTCCCTTGCTCCA
TCAATCACACTGCTACTTATTCATTAGTTTGCATCTTCCATCTCCTGAACTCCACATCGTCCCGGTGCTAGCTCGACCAA
TTGCATCATCTATCGTTTGTTTTCCCTCAATCTCTAAGCCGATAGAGAGGTGAGAGTTTGAGGGGTAGGTCGGCCGACCG
GAGGGGCTGTGGACCATGTCTGGCGTGTGGGTGTTCAAGAACGGGGTGGTGCGCCTGGTGGAGAACCCGGGGAGCGAGCG
GACGTCGACGGTGCGGCGGAAGGCGCTGCTGCACACGCCGAGCGGGCAGGTGGTGTCGTCCTACGCGACGCTGGAGGCGA
AGCTGACGGCGCTGGGGTGGGAGCGCTACTACGAGGACCCGGCGCTGTATCAGTTCCACAAGCGCGGCTGCCTCGACCTC
ATCTCCCTCCCCAGGGACTTCAACCACTTCTCCTCCGTCCACATGTACGACGTCGTCATCAAGAACAGGGAGTCCTTCCG
CGTCGTCGACGCCTAGCCAGCCCTCTTCCGTCCATGCAGTCTCTCGATCTCGTCTCGTCTGTTCAGCTATAGCTCTTC--
-CATCGTTTGACTTGATTTGCCATGCAGGGTTTGTTGTT---AGTGATCGGGATGTTATATACGATTGGTTGTGCCTAAT
TTGGTTGGGAAGTGTAGTGTGGTAGTGGAGTGAGCGAGGGTACTGTTTTTGCACACATATGTGCGCGTGGTGCCTGAGTA
TATGCATAGGTTTTCGTTGTGGTGTGTATATGTATGCGTGCTGTGGGGTGTGTAAGATCTCTGTTTTGATGTAAATTAGT
GTCCGCGTGATGAC--TATATATCCATTTACGTTCATTTGCACGTTTCTCTGCATGCACATGCATGATGCATGGCACCAG
CCATGTCCTGAACTTGTTGCATGCATATATGGGTATGACTATGTCACATCTAGATGTGTGATAATATCTCACATCTAAAT
TGACTTCTTCATCTGTTT-GTGGCCTCCTCCACTTGTTTTCTTTGTATTTTTTTAACAG---TATATACACAAGAAAGGT
ACC--ATGATTCCCGTACAGCTACAGGCTCAAAAAAGTTTGGACGTGGCTGCTCAAACAAAAAACGCTACGCATGCACGC
TACTGTAGATAAAATCAAGGTGCTTGCTTGTGTGTTTGGTTTGAGGCTAGCTTTGCATGTGCGAGCGAACGAAAGGGAAC
TTTGGATAAGA--------------------TTTAAAAT-----TTTGAATATTTTATCAAAATCGTGAACATTTTTTGA
AGAAAGAAAAAATGTTGA--ATTTTTCGAACATATTTTGAATTTTCAAAAAAAGG----TTCCAAATATCTTTGAAAAAC
GCAAACATTTTTAACTTTTTTTAGTCTTTTTGAAAGTTTT-AATTCCGAACACTACTTAGAAAATGTGAATAATTATTGA
AAATTGA-----TTTTTTTTTAAAG----------------------------A-TATTGAACATTTGTGACTTTCTGAA
AAAGAAAAAAGAATA------------ATAATCAAATATACCAGTTGCATGTTAATGCCTCACTTGCAACT-------AG
GACAAAAAAAG-TGTC-AGCCTAGCTGTGAGTCGGTTGTGGATTTGCAACTTGGA-AAAAAAAA-GTCAAGCCTAGTAGT
TAGTCGATGGTGGACTTGCAATTGTGTCA--AAAAA-ATCTTGCCCAATTACGAGTCAAGGACAAACTTGCAACTC--GG
GAAAATCACAATCAAGGGCCCTGTTGCATGTCAATGAGGAACTTGCAACTGGTTAAAAATGGTCGGGCTTACTTGTGAGT
CGATGGTTGACTTGGAACTA------------------------------------------------------------
-GTTTAAAAAAGGGTCAGACCTAGTTGTGAGTCGGTGGTTGACTTCCAACCGAGACCAAAAAAGGTCGGGA-CCCCAGTC
GTGAGTTGAGGGTGGACATGCAATTGGGAGAAACTAAAAGGTCGTGTCCTAGTTACAAGTCGGGGCTGGGATTGCAACTG
GGACAAAAAAT--TCAGGCCCCAGTTGCGAGTCAAGGATGGACTGGCAACCAA---------------------------
-------------------------------AAAGAATGGGCGGGCCCTAGTTGTGAGTTGATGGTGGACTTTCAACTGG
GGCAAAAAAGATTTGGCCCCACTTGTGAGTCGAGGGAGGACTTGCTG
>chr3D_1
TGGCTAGCGAGCTAGGAAGTTTAAGATAAGCCACAAATTTCTCT---CTGCATGCAGCAGATGCTTGAGAGCTTGTGAGT
TACTATTAGGGACAAAGCTAGCAGGCAAAAGTAAATTCGGCCATGCCGTACACAAAATATATACTTGACAACGAGAGAGA
GTATCAATTTTGTTCTCGACAAAGGCAACATTGGCTTGATCGACCGGCCAGAAATTCCCTTTCGTGGAAAAAACAATGCT
GCAAAAGGTGCGCAAAGATAGCTCTCATATTTCTTATTGTATAAGTAAAGTAGAAAACTGTATGGCGAGTGAATCCTATT
CTCCTGAGAATTAGGCTAGCTCTTTTTGTTTTCCTTTCAGGAAAAAGGTGGGTAGGATTCCTCGCACAACATCACATTCT
TTCTTTTCAATTTTCCGTATGGGAATGCTCAAGCCATAGATTACGCATGAATTATATGTAGATCTTCCCATTGGCAATTA
ACCAACGCCATCAGTTAATGTCCTGTTTTTGACGTGTCGCAGGGCGGCCGCGACACATGTCAAATTTCGTGACCTCATGA
TGATCAATCACCTCATGCACTACGTAATTCTGAAAAAATAACAATATGCGTAGCATATAGCTACCTTTTTTAGCTACCTA
GCTAGCTAGAATTTCTTTCTTTTTTCCAACAAATATATTCCAGGTAGCTTATCAAGAACATAAGCTAGCTAGGCACATAT
ATTCTCCCGCGCGCACTACTCAAGTTTAATGAACGTACCATATATTCTGCTTCTCTCCCATCCCTGTGCATGCAGCCAGC
TACAGCATCTTCCTGACCTAACCTAGCTACAAACTAAAGACGCCCTTCTCTTCTCTGGTGCATGCACGCGTACATCGACG
TACTAATCACTAGCAGTACAGTATCGCAGACGCATAAGAAATCTATGTCCTGCGGCTGTCCCCCGTATACATGTCACCTC
TACCCCACACCATCGATAAGCTAGCTTCATCCACATCCACCTCTATATATACCCCCTTCATCTCGCCCTCCCTTGCTCCA
TCAATCACACTGCTACTTATTCATTAGTTTGCATCTTCCATCTCCTGAACTCCACATCGTCCCAGTGCTAGCTCGACCAA
TTGCATCATCTATCGTTTGTTTTCCCTCAATCTCTAAGCCGACAGAGAGGTGAGAGTT-GAGGGGTAGGTCAGTCGACCG
GAGGGGCTGTGGACCATGTCTGGCGTGTGGGTGTTCAAGAACGGGGTGGTGCGCCTGGTGGAGAACCCGGGGAGCGAGCG
GACGTCGACGGTGCGGCGGAAGGCGCTGCTGCACACGCCGAGCGGGCAGGTGGTGTCGTCTTACGCGACGCTGGAGGCGA
AGCTGACGGCGCTGGGGTGGGAGCGCTACTACGAGGACCCGGCGCTGTACCAGTTCCACAAGCGCGGCTGCCTCGACCTC
ATCTCCCTCCCCAGGGACTTCAACCACTTCTCCTCAGTCCACATGTACGACGTCGTCATCAAGAACAGGGAGTCCTTCCG
CGTCGTCGACGCCTAGACGCCCCTCTTCCGTCCATGCAGTCTGTCGATCTTGTCTCATCTGTTCAGCTATAGCTCTTCTT
CTATCGTTTGACTTGATTTCGCATGCAGGGTTTGTTGTTGTTAGTGATCCGGGTGTTATATATGATTGGTTGTGCCTGAT
TTGGTTGGGAAGTCTAGTGTGGTAGTGGAGTGAGCGAGGGTACTGTTTTTGCACACATATGTGCGTGTGGTGCC-GAGTA
TATGCATAGGTATTCGTTGTGGTGTGTATACGTATGCGTGCTG-GGGGTGTGTAAGATCTCTGTTTTGATGTAAATTAGT
GTCCGTGTGATGAC--CATATATCCACTTACGTTCATTTGCACGTTTCTCTGCATGCACATGCGTCATGCATGTCACCGG
CCATGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr3A_1
TGGCTAGCTAGCTAGGAAG-TTAAGATAAGCCACAAATTTCTCTCTGCTGCATGCAGCAGATGCTTGAGAGCTTGTGAGT
TACTATTAGGGACAAAGCTAGCAGGCAAAAGTAAATTCCACCATGCCGTACACAAAATATATACTTGACAATGAGAGAGA
GTATCAATTTTGTTCTCGACAAAGGCAACATTGGTTTGATCGACCGGCCAGAAATTCCCTTTCGTGGAAAAA-CAATGCT
GCAAAAGGTACGCAAAGATAGCTCTCATATTTCTTATTGTTTAAGTAAAGTCGAAAACTGTATGGCGAGTGAATCCCATT
CCCCTGAGAATTAGGCTAGCTCTTTTTGTTTTCCTTTCAGGAAAAAGGTGAGTAGGATTCCTCGCACAACATCACATTCT
TTCTTTTCAATTTTCCATATGGGAGTGCTCAAGCCATAGATTACGCATGAATTATATGTAGATCTCCCCATTGGCAATTA
ACCAACGCCATCAGTTAATGTCCTGTTCTTGACGTGTCGCGGGGCGGCCGCGACACATGTCAAATTTCGTGACCTCATGA
TGATCAATCACCTCATGCACTACGTAATTCTGG-AAAATAACAATATGCGTAGCATATAGCTACCTTTTTTAGCTACCTA
CCTAGCTAGAATTTCCTTCTTTCTTCCAACAAATATATTCCAGGTAGCTTATCAAGAACATAAGCTAGCTAGGCACATAT
ATTCTCCCGCGCGCACTACTCAAGTTTAATGAATGTACCATATATTCTGCTTCTCTCCCATCCCTGTGCATGCAACCAGC
TACAGCATCTTCCTGACCTAACCTAGCTACAAACTAAAGACGCCCTTCTCTTCTCTGGTGCATGCACGCGTATATCGACG
TACTAATCACTGGCAGTATAGTATCGCAGTCGCATAAGAAATCTATGTTCTGCGGCTGTCCCCCGTATACATGTCACCTC
TACCCCACACCATCGATAATCTAGCTTCATCCACATCCACCTCTATATATACCCCCTTCATCTCGCCCTCCCTTGCTCCA
TCA--------------------------------------------------------TCCCAGTGCTAGCTCGACCAA
GTGCATCATCTATCGTTTGTTTTCCCTCAATCTCTAAGCCGATAGAAAGGTGAGAGTT-GAGGGGTAGGTCGGCCGACCG
GAG-GGCTGTGGACCATGTCTGGCGTGTGGGTGTTCAAGAACGGTGTGGTGCGCCTGGTGGAGAACCCGGGGAGCGAGCG
GACGTCGACGGTGCGACGGAAGGCGCTGCTGCACACGCCGAGCGGGCAGGTGGTGTCGTCGTACGCGACGCTGGAGGCGA
AGCTGACGGCGCTGGGGTGGGAGCGCTACTACGAGGACCCGGCGCTGTACCAGTTCCACAAGCGCGGCTGCCTCGACCTC
ATCTCGCTCCCCAGGGACTTCAACCACTTCTCCTCCGTCCACATGTACGACGTCGTCATCAAGAACAGGGAATCCTTCCG
CGTCGTCGACGCCTAGACGGCCCTCTTCCGTCCATGCAGTCTCTCGATCTCTTCTCATCAGTTCAGCTATAGCTCTTCTT
CCATCGTTTGACTTGATTTCGCATGCAGGGTTTGTTGTTGTTAGTGATCCGGGTGTTATATATGATTGGTTGTGCCTGAT
TTGGTTGGGAGGTGTAGTGTGGTAGTGGAGTGAACGAGGGTACTGTTTCTGCACACATATGTGCGTGTGGTGCC-GAGTA
TATGCATAGGTTTTCGTTGTGGTGTGTATATGTATGCGTGCTG-GGGGTGTGTAAGATCTCTGTTTTGATGTAAATTAGT
GTCCGTGTGATGACTATATATATCCACTTACGTTCATTTGCACGTTTCTCTGCATGCACATGCGTCATGCATGTTACCGG
CCATGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2B_1941
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------------------------------GGGTATGACTATGTCACATCTAGATGTGAGATGATATCTCACATCTAAAT
TGACTTCTTCATCTGTTT-GTGGCCTCCTCCATTTGTTTTCTTTGTATTTTTTTTAACAGTATATATACACAAGAAAGGT
ACCACATGATTCCCGTACAGCTACAGGCTCAAAAAAGTTTGGACGCGGCTGCTCAAACAAGAAACGCTACGCATGCACGC
TACTGTAGATTAAATCAAGGTGCTTGCTTGTGTGCTTGGTTTGAGGCTAGCTTTGCATGTGCGAGCCAACAAAAGGGA-C
TTTGGATAAGA--------------------TTTAAAAT-----TTTGAATATTTTATCAAAATTGTGAG-ATTTTTTGA
AGAAAGAA-AAATGTTGA--ATTTTTCGAATATATTTTGAATTTTGAAAAAAAGG----TTCCAAATATCTTTGAAAAAC
GCAAACATGTTTAAC-TTTTTTAGTCTTTTTGAAAGTTTT-AATTTTGAACACTACTTAGAAAATGTGAATAATTATTGA
AAATTTC-----ATTAT-------------TTTTTTAAAT----CATTGAACATTTTTTCAAAATTTGTGACTTTCTAAA
AAAGAAAAAAGAATA------------ATAATCAAATATACCAGTTGCATGTTAATGCCAGACTTGCAACT-------AG
GACAAA-AAAG-TGTC-AGCCTAGTTGTGAGTCGGTTGTGGATTTGCAACTCGG--GAAAAAAA-GTCGAGCCTAGTAGT
TAGTCGATGGTGGACTTGCAATTATGTCA--AAAAA-ATCTTGGCCAGTTACGAGTCAAGGACAAACTTGCAACTC--GG
AAAAATCATAATCAAGGGCCCTGTTGCATGTCGATGAGGAACTTGCAACTGGTTAAAAATGGTCAGGCTTACTTGTGAGT
CGATGGTTGACTCGCAACTATGACAAAAA------AGTAATCAAAGATCACAGTTGCGTGTCGATGGTTGACTTGTAACT
AGTTTAAAAAAGGGTCAGACCTAGTTGCGAGTCGGTGGTTGACTTCCAAC-GAGACCAAAAAAGGTCGAGA-CCCCAGTC
GTGAGTTGAGGGTGGACTTGCAATTGGGAGAAACTAAAAGGTCGTGTCCTAGTTGCAAGTCCAGGGTGGGATTGCAACTG
GGACAAAAA---GTCGGGACCCAGTTGCGAGTCAAGGATGGACTGCAACCGAA---------------------------
-------------------------------AAAGAATAGGCGGGCCCTAGTTGCGAGTTGAGGGTGGACTTGCAACTAG
GGCAAAAAAGATCCGGCCCCAGTTGCGAGTCGAGGGTGGACTTGC--
>chr7D_1947
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------------------------------------GACCATGTCACATCTAGACGTGAGATAATATCTCAAATCTAAAT
TGATTTTATCATCTGTTTTGTGGCCCCCTTCACTTGTTTTCTTTTTGGTTTCTTAACAG---TATATACACAAGAAAGCT
ATC--ACGATTCAAGTTCAGATACACGCTCAAAAAAGTTCGGCCGTGGC---------------AGCTACGCATGCAAGC
TACTGTAGATC-AATCAAGGCGCTTGCTTGTGTGCTTGGTTTTAGGCTAGCTTTGCACGTACGAGCGGTAG---GGAA-C
TTTGAATATTTTTCTGGAAAACAGG----ATTTTAAAAAATATATTCAAATATTTTTTGGAAATTG--------------
---------------TGAACATTTTTCGAACATATTTTGAATTTTGAACAAAATTTTGATTTCAGTTTTCTTTGAAAAAC
ATGA----TTTTTTA-TTTTCTAGTATATTTGAAAGTTCT-AATTCTGAACTTTATTTAGAAAATGTGAACAATTTTTAA
AATTCTG-----AAAT-TTTAAATGAACAATTTTTTAAAAAAGACATTGAATTTTTTTTCAAAATTTGTGACTTTCTGAG
AAAGAAAAAGGAAAA------------ATAATCAAATAGACCAATTCCATGTTAATGGTGGACTTGCAACT-------AG
GACAAA-AATG-TTTC-AGCCCAGTTGTGAGATTGTTGTGGATTTGCAACTTGGATAAAAAAAAGGTCGAGCCTAGTAGT
TAGTCGATGGTGGACTTGCAATTGTGTCC--AAAAACATCGTGACCAATTGTGAGTCAAGGATGGACTTGCAACTC-GGG
AAAAAACATAATCCAGGGTCCCGTTGCATGTCAATGGGGAACTTGCAACTCATTAAAAATGGCCGGACCTAGTTGTGAGT
CGATGGTTGACTTGCAACTACGAAAAAAA------A----TCAAAGGTCACAGTTGCATGTCGATGGTTGACTTGGAACT
GGTATAAAAAAGGGTCAGACCCAGTTGCGAGTCGATGGTTGACTTGCAACTAAGACCAAAAAATGTCGGACCCCCCAGTC
GCTAGTTAAGGGTGGACTTGCAATTGGGGAAAAAAATGTCGGGTCCCG---GTTACGAGTCGAGGGTGAGATTGCAACTG
GGACAAAAAAAGGTTGGGCTCCAGTTGCGAGTCAAGGATGGACTTGCAACTGGAAG------------------------
-------------------------------AAAAAATGGCCGGGCCCTAGTTGCGAGTCGAGGGTGGACTT--------
-----------------------------------------------
>chr2D_1953
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------------------------------------------GTTACATCTAGA--TGAAATTATACCTCAAATCTAAGT
TGACTTCATCCTCTGTTT-GTGTCCCCCTCCATTTGTTTTCTATGTATTTTTTTAACAG---TATATACACAAGAAAGCT
ACC--ACGATTCATGTACAGCTACACGCTCAAAAAAGTTTGGCCGTGGCCGCTCAAACAAAAAAGGCTACGCATGCAT-C
TACTGTAGATC-AACCAAGGTGCTTGCTTGTGTGGTTGGTTTGAGGCTAGCTTTGCATGTACAAGCGAACGGCAGAGA-A
CTCAAATATTTTTCTGGAAAAGGGAATACATTTTAAAAT-----TTTGAATATTTTCTGGAAATTGTGAATATTTTTTGA
AGAATGAACAAATGTTGA--ATTTTTCGAGCATATTTTGAATTTTGAACAAAATTTTGATTCCAATTTTCTTTGAAAAAC
GT-AACATTTTTAAC-CTTTTTAGTCTTTTTGAAAGTTTT-AATTCCAAACATTATTTAGAAAATGCGAACAATTTATTG
AAATTCTGATTTTTTT-TTTAAATTAACA----TTTTTAAAAGACATTGAA-ATTTTTTCAAAAATTGTGGCTTTC----
---------TGAAAA------------AAAATCAAATAGACCAGTTGCATTTTAATGATGGACTTGCAACT-------AG
GA-AAA-AAAG-GGTC-GGACCAGTTGTGAGACGGTTGTGGATTTGCAGCTCGGATAAAAAAAG-ATCGAGCCCAGTAGT
TAGTCAATGGTGGACTTGCAATTGTGTCA--AAAAA-AA-TTGACCAGTTGCGAGTCAAAGATGGACTTGCAACTTAGGG
--AAAATATAATCAAGGGTCCCGTTGCATGTCAATGGGGAACTTGCAACTGGTTAAAAATGGTCGGGCCTAGCTGTGAGT
CGATGGTTGACTGGCAACTA------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------
>chr7D_2110
TGGCGCTCAAACA-------------------------------------------------------------------
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----------------------------------------------------------AATAAAAGCTACGCATGGACGC
AACTATAGATC-AATCAAGGTGCTTACTTGTGTGCTTGGTTTGAGGCTAGCTTTCCATGTACGAACGAACGGCATGGAAC
TTCAAATATTTTTTTGGAAAATGCAATACATTTTAAATT-----TTTGAATATTTTGTGGAAATTGCGTATATTTTTTGA
AGAAAGAACAAATGTTGA--GTTTTTCGAACATATTTTGAA-TTTGAACAAAATTTTGATTCCAATTTTCTTTGAAAAGC
ACGAACGTTTTTTAC-TTTTTTTGTCATTTTCAAAG-TTT-AATTCCGAACATTATTTAGAAAATGCGATCAATTATTGA
AATTCCC-----TTTT-TTTAAATGAACGGTTTC-TCTAAAAGACATTGAA-CTTTTTTCAAATTTTGTGACTTTTTGAA
AATGAAAAATGAAAA------------ATAATCAAGTAGACTAGTTGCATGTTAATGATGAACTCGCGAAT-------AG
GACAAA-AAAACGGCC-GGCCCAGTTATGAGTCGATTGTGGATATGCAACTCGGATAAAAAAAG-GTCAAACCCAGTAGT
TAGTCGATGGTGGACTTGCAATTGTGTTA--AAAAA-ATCCTGGCCAATTGCGAGTCAAGGATGGACTTGCAACTC-GGA
AAAATACATAATCAAGGGTCGTGTTGCATGTCAATGGGGAACTTGCAACTGGTTAGAAATGGTCGGGCCTAGTTGTGAGT
CGATAGTTGACTTGCAACTACGAAAAATTAAGAAGA----TCAAAGGTCATAGTTGCGTGTCGATGGTTGACTTGGAACT
GATAG-AAAAAGGGTCAGACCCGGTTGCAAGTCGATGTTTGTCTTGGAACTGAGACCTAAAAAGGTCGGACCC-CCAGTC
GCAAGTTGAGGGTGGACTTGCAATTGGGAGAAAACAAAAGGCCGC-TCCTAGTTACGAGTCGAGGGTGGGATTGCAACTG
GGACAAAAAAAGGTCGGGCCCCAGTTGCGAGTCAAGGATGG-CTTGCAAGTGGAAG------------------------
-------------------------------AAAAAACTGTCGGGCCCCAGTTACGAGTCAAGGGTGGACTTGC------
-----------------------------------------------
>chr7D_2279
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-------------------------------------------------------------------------------A
AGAAAGAACAAATTTTAA--ATTTTCCTAACATATTTTAAATTTTGAACAAAATTTTGATTCCAATTTTCTTTGAAAAAC
GCGAACATTTTTAAC-TTTTTTAGTCTTTATGAATG-CTTTAATTTCATACATTATTTATAAAATGTAAACAATTATTGA
AATTCTG-----ATTTGTTTTAAGTTAACAAGTTTTCTAAAAGACATTGTA-CATTTTTCAAAATCTGTCACTTTC----
---------CGAAAAAGGAAAAAAAAAT---TCAAATAACCCAGTTCCATGTTAATGGTGGACTTGCAAGTTGCAACCAG
GACAAA-AAAA-TTGGTGGCCTAATTGTAAGTCGGTTGTGGATTTGCAACTCGGATGAAAAAAAGGTCGAGCCGAGTAGT
TAGTCGATGGTGGACTTGCAATTGTTTCA--AAAA---TCTTGGCCAGTTGCGAGTCAAGGATGCATTTGCAACTC-GGA
-CAAGAAATAATCAAGGGTCTCATTGCATGTCAATGGTGAATTTACAACTGGTTAAAAATGGTCAGGCCTAGTTGTGAGT
CGATGGTTGACTTGCAACTA------------------------------------------------------------
-G------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2B_2287
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-------AAATATGTTGAACATTTTTCAAACATATTTTGAATTTTGAACAAAACTTTGATTCCAATTTCATGA-AAAAAT
GCGAACATTTTTTAA-TTTTTTAGTCATTTTGAAAGTTTT-AATTCTGAACATTATTTAGAAAATGTGAACAATTATTGA
AATTCCG-----AATT-TTTAAATGAAAAATATTTTTAAAAAGACATTGAA-CA-TTTTCAAAATTTGTGACTTTC----
---------TGAAAAGAAAAGGAAAAAATAATCAAATAGACCAATTGCATGTTAATGGTGAACTTGCAAGT-------AG
GACAAA-AAAG-TTTC-GGCCCAGTTGTAAGTCGGTTGTGGATTTGCAACTCCAATAAAAAAAG-GTCAAGCCCAGTAGT
TAGTCAATGATGGACTTGCAATTGTGTCATAAAAA---TCTTGGTCAGTTGCAAGTCAATGATGGACTTGCAACTTAGGA
-AAAAACATAATCTAGGGTCTCGTTGCATGTCAATAGGGAACTTGCAACTGGTTAAAAATGGTCG-ACCTAGTTGTGAGT
CGATGGTTGACTTGGAACCG------------------------------------------------------------
-GTATAAAAAAAAGGGAGACCCAGTTGTGAGTCGATGGTTGACTTGCAATTGAGACCAAAAAATGTTGGAC-CCCCAGTT
GTGAGTTGAGGGTGGACTTGCAAGTGGGAGAAAAAAGGTTGGT---TCCCAATTACGAGTCGAGGATGGGATTGCAACTG
CGACAAAAAAATGTCGGGCCCTAGTTGCGAGTCAAGGATGGACTTGCAACTAGAAGGAAAAAAAATGGTTGGACCCCAGT
TGCGAGTCAAGACTGGACTTGCAACTGAGACAAAAAAAGACCCGGCCCCAGTTGCAAGTTGAGGGTGGACTTGC------
-----------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------S-------------------------------------------------------------
----S---------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-----------------------------------------------------------S--------S-----------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------------S---------------------
---------------------------------------------------------------S----------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
----------------S-S-------------------------------------S-----------------------
-------------------SS----------------------------S--S---------S--------------S--
-----------------------------------------------------------------S--------S-----
-------------------------------------------S------------------------------------
-----S--------------------S------------------------------------S-S-------S----S-
------SSSSSSSSSSSSSSSSSSSSSSSS----------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----------------------S---------------------------------------------
----------------------------------------------------------------S-----S---------
---------------------------------------------S----------------------------------
---------------S----------------------------------------------------------------
-----SS----------------S--------------------------------S--S--S-----------------
-----------------------------------------------------------SS-------------------
------S-----------------S-------------------------------------------------------
-------------------------------------------S------------------------------------
S-------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-----------------S--------------------------------------------S--S--------------
----------S----S----------------------------------S-----------------------------
------------------------------------------------------S-------S---------S-----S-
------------SS-------S---S----------S--------SS
>forward_374
--------------------------------------------------------------------------------
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--------------------------------CCTTTCAGGAAAAAGGTGGGTG--------------------------
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>reverse_1620
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCCATGCAGGGTTTGTTGTT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_1104
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CTGAACTCCACATCGTCCCG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_3263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGGTGGACTTTCAACTGG
GG---------------------------------------------
