>input_sequence_60814
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
TCAGATTTCTAGTGCGGTCCTGAAGATATATGTTTGACATGATCGTTGTTACACTAATTGGATAACTATATCCCGTTGCA
ACGCACGGGTAATTA-CCTAGCATGAGACAAAAATAGATGCTGGATTGCAGCGTGTGCTTAGAAACTA-GAAGCTAATTG
CTAAGGAGATTCAAAGGTTGGAGACTAGGAGGAGCC---------GGCGAGCCATGACTGAATATCAATGCATGCAATGG
AGGGGGAGGCCATGATCCGAGGACCGCTCGTTTATTTTTCCTTGAGAAGAACATGGGTGACCACCAGAAGAAATGGAAAG
GAAGGGACTCGTGTTTTGCGGACCAGCGGTGTCTGCTCAAAACTAGGCCCCGGCTACCTCGAGCTCCACCACGCAATCCG
CAGAACACGCAGAGCTGCAAGCAAATCCACATCGATTTAACCTTCCTCTTGATCGATCGCACGCACGGCTACAATTCTCG
CGTCTTCCTCTAAAAGAAGCGCAATA------------------------------------------------------
------------------------------------------TAATTCTCATCATCGTCGTCGAGGCGCACCCATGGCGG
CGTCCGCGCGCACATGCCTGGTGGTGGCAGCGCTGGCGTGCGCGCTAACACTGGCGCTGCGCT------CGGCGGACGCA
CAGGCGGACGAGTCCCAGAAGCCCAAGTGCGCTCCGGGCGCCGCCACGACGTGCCGCGTGGGCGCGTTGCGCGACCCGGA
GAACCAGGAGGAGGAGGGCCTGCTCAACGTGAAGGTGCCGAGCAGCGCGGCCGACGACGACTACAGCGATCCCGACCAGC
CCAAGGACCCCGACCAGTCCGACGGCGATGACCTCGTCGTCCTCGGCCACTGATACGATCAATCGATTG---CGACACGA
TCGATCACGTGCGCCTGGCGCGTAGCATTACATTTCTTG------------------------------------TTTAT
TTGTAGCTCGTTTTTTGGTGCGTTAAGTAGATAGTGTGCTTGGACCGCGAACGTGTGTTTTCC---AAAGATTG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TAAAAGGATTTGGGCATTTGGTAAAGTCTGATCCT--TA---------CTCGATTAATCTGCGGT
ACGCCATTCCTAGTCTCAAGTTTTTGGTTTGAT--TTGGCAATATGAT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TG-----------
-GTCAAAGATACATGAATAGTCTCAACAAAGTAAA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr6D_1_TraesCS6D01G322600
TTCTCCCGTTGTCTCGGGCGCCCCCTCTCTCCCTTGCTAGTTCTAATCTTGTTCTAGACTTGATCTAGTTCTAGTCTCTA
GTTCCTCATAATAGAGAAGCGCCATGTGCGGTTCTCTTCTTCTCCCTCTAATTCTCCGGCGACGATTAGCTCTGGATGGC
GAAGCGCTGTCGGATCGTGAAGCATGTACGCTTGCAATCTGTAGTGAGACCGTGCTTTCGGTCTTCGGTTCAAGGTATCG
TTCATGAATGGTACGAGGGACTTCACAATGATCTACACCAACTCTTATTTCACTGTAACTCAAAGTTGGTAATGATCCGA
TCTAAATCTCTTATGCATCTTCATAGTGTTCTTGGGATCGTAATCGTAGGACGATTTTTTTTGTTATCTACTACGTTTCC
CAACAACATATAGGCATATTTTAATCATGGTGTGGCACACATAGAGGAACAGATTGGGTGCACACGCGTGGAACCATTGA
CTCAGGTTCAGGCCCTCATGGTGAGGTAATACACTACATCCTCCTTGTCTGATATTTATTATGGTTTCTCGTATGTGAGA
GGTGCGTCTATAAGATGACTTGGAGGTTGTGGATCATGCCGACTTGGGATGCCCATACCTCACCTTAGAATATGTCTTAT
ATTACCACAACCGCATGATTAAGTTTTTGAAATTCGAAGTATGAGTGAAATGGTGAAGGGACTGTGAGCCGGATGTGCCA
TTGGCGACAATGTCAGCCTAGGATTGAGGAGGCAA-GATAACGAGGTGGAAGAAGAGGAGTGGTTGAACGTAAAAAAGTC
AATATTGCT-----------------GATCATAAAGATACGTAAATGCTAAAAATCTGACGTCAGATTTTAAGCATAGCA
ATTTGAATGTTGTTTTCATCGCAAATTACGTGTCACGGGCATAGTCAGAATTTGTTATGCTTGCTGAAGGAAATTGCTAG
GCTCGCGGCATGTAATTTGCA--------------------ATAAAAACATTTGATTAGCCATGT-TTAAAAATCTGACA
TCAGATTTCTAGTGCGGTCCTGAAGATATATGTTTGACATGATCGTTGTTACACTAATTGGATAACTATATCCCGTTGCA
ACGCACGGGTAATTA-CCTAGCATGAGACAAAAATAGATGCTGGATTGCAGCGTGTGCTTAGAAACTA-GAAGCTAATTG
CTAAGGAGATTCAAAGGTTGGAGACTAGGAGGAGCC---------GGCGAGCCATGACTGAATATCAATGCATGCAATGG
AGGGGGAGGCCATGATCCGAGGACCGCTCGTTTATTTTTCCTTGAGAAGAACATGGGTGACCACCAGAAGAAATGGAAAG
GAAGGGACTCGTGTTTTGCGGACCAGCGGTGTCTGCTCAAAACTAGGCCCCGGCTACCTCGAGCTCCACCACGCAATCCG
CAGAACACGCAGAGCTGCAAGCAAATCCACATCGATTTAACCTTCCTCTTGATCGATCGCACGCACGGCTACAATTCTCG
CGTCTTCCTCTAAAAGAAGCGCAATA------------------------------------------------------
------------------------------------------TAATTCTCATCATCGTCGTCGAGGCGCACCCATGGCGG
CGTCCGCGCGCACATGCCTGGTGGTGGCAGCGCTGGCGTGCGCGCTAACACTGGCGCTGCGCT------CGGCGGACGCA
CAGGCGGACGAGTCCCAGAAGCCCAAGTGCGCTCCGGGCGCCGCCACGACGTGCCGCGTGGGCGCGTTGCGCGACCCGGA
GAACCAGGAGGAGGAGGGCCTGCTCAACGTGAAGGTGCCGAGCAGCGCGGCCGACGACGACTACAGCGATCCCGACCAGC
CCAAGGACCCCGACCAGTCCGACGGCGATGACCTCGTCGTCCTCGGCCACTGATACGATCAATCGATTG---CGACACGA
TCGATCACGTGCGCCTGGCGCGTAGCATTACATTTCTTG------------------------------------TTTAT
TTGTAGCTCGTTTTTTGGTGCGTTAAGTAGATAGTGTGCTTGGACCGCGAACGTGTGTTTTCC---AAAGATTG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TAAAAGGATTTGGGCATTTGGTAAAGTCTGATCCT--TA---------CTCGATTAATCTGCGGT
ACGCCATTCCTAGTCTCAAGTTTTTGGTTTGAT--TTGGCAATATGAT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TG-----------
-GTCAAAGATACATGAATAGTCTCAACAAAGTAAATTATGCAATGTATATGTTTTCTCTCTCAAACTCTAAAGTAGGATG
CAGCGTCAGC------ATTAGCGCACACTGATTTAAGTAAATGTATATTCCATAGTGACC----TTGTATAAGTAAATGG
AGGGTTTCTGGCCAGTTTGGATTAATTAGATTATGATTTGCATCACTTTCGTAAAATACTTTGTGTGGTTGAATGGTCGT
CTTTTGCAGACTTTTGCTCCT-CCG-TGGTCTCACACAAGGCTATCTTTTGTCTCCGTGTTTATTTCCTTTAGTGGCTGA
TGTGCTTTTGCTGTTGTTAAATGATGTCTCTAGTAGAGGTGGCATCCAAGATTTTCGTTTGTGCACAC-----------A
GGTCGGATTTGCTGTTTGCAAATGATAGTGTGTTGTTCTTTAAGGAAAAATTTGAACAAA------TTTTGATTATTCAA
ATGATTTTGGCCCTCTATGAAGAAGGGACAGGTCAATTTTCGAGTCCATCTAAGTGTTCCATTTTGTTTGGAAGAACTG-
-TAGTTTGGAAACC-CAAGCTTCCATCATGGTCATTTCCTGCTGATGGTTTTGAGGATAAGTACCTTGGGTTACCGGTTT
CACAAGAAAGAATTAAGGCAGCTAAGATTCACTCTCTCCAAAAGATAAAATT-TTAAGAGGCTTTCGGACTGGATTGAGA
AATTTTCTTCTAGTGGTACAAAAGAAATTATAATTAATTCAGTCATTCAGGCTTTACCTATTTGCGCAAGGGG-TTTTTT
CAAATTTCCGGTTGTGTTGTGTGAGAAATTATCTAGTTAATTAGGATTTTCTCATGGGCTGATGACAAGGAGCGGAGGAT
GACTCATTGGCTTGACTCGGATAAATTAACAAGATCATAGGGAGGTGGTGCGATGGCTTTTCGAGATCTAAGG-TTGTTT
AGCAAGGCCCTTCTAGACAAGCAGGGTTGGCATTTATT-GAAAAATCCCGAGTCCCTTTGTGCTAAA-TGTTGATGGCCA
AGTACTATTCTCATGATCATCTTCTTGATATT
>chr6A_627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGAATCTGTCTTAT
GTTACCACAACCGCATGATTACGTGATTGAAATTCGAAGTATGAGTGAAAGGGTGAAGGGGTCATGAGTTGGA-GTGCCA
TTGGCGACAATGTCCGGCTTGGATTGAAGAGGCAACGATAACGAGGTGGAACAAGAGGAGTGGTTGAACGGTAAAAATGT
CAGTAATGTTGTTTGGTGTATATGAGGATCACAAAGATATAGAAATGCTAAAAATCTAACGTCGGATTTTTAAGTATGGC
AAATCAAACTT-TTTTTATGGC--ATTACATGTCGCGAGCAA-----TTTCCTTCAGCAAGCATGGCAAATTCTGGCAAA
AAAA---CTTAACTTGTGAAGATGCTAAAGGGAATATTGTCATAAAAACATTTGATTAGCCATGTGTTAAAAATCTGACA
TCAAATTTGTAACGCGGTTCTAAAGATATATGCTTGACATGATTGTTGTTACACCAATTGAATAACCATA-CCCATTGCA
ACGCACGCGCAATTACC------TGAGACAAAAATAGATGCTGGATTGTAGCGG----TTAGAAACTTGGAAGCTAATTA
CTAAGGAGATTCAAAGCTTGCATTTGAGAGTAGGGAGGTGGGGTGGGGGAGCCATGATTGGATATCAATGCATGCAATGG
A-GGGGAGGCCATGATCCGAGGAC---TCGTTTATTTTTCCTTGAGAAGAACATGGGTGACCACCAGAAGAAATGGAAAG
GAAGGGACTCGTGTTTTGCGGACCAGCGGTGTCTGCTCAAAACTAGGCCCCGGCTACCTCGAGCTCCACCACGCAATCCG
CAAAACACGCTGAGCTGCAAGCAAATCCACATCGATTTAAGCTTCCTCTTAATCGATCGCACGCATGGCTACAGTTCTCG
CGTCT-CCTTAAAAAATAGTACAATATACTTTCTCCGTTTCAAAATAGATGACTCAACTTTATACTAACTATATACTAAA
GCTAGTATAAAGTTGAGTCATGTTTTTTTAGAACGGAGTGAGTAATTCTCATCGTCGTCT---AGGCGTACCCATGGCGG
CGTCCGCGCGCACATGCCTGGTGGTGGCAGCGCTGGCGTGCGCGCTAACACTGGCGCTGCGCTCGGCGTCGGCGGACGCG
CAGGCGGACGAGGCCCAGAAGCCCAAGTGCGCTCCGGGCGCCGCCACGCCGTGCCGCGTGGGTGCGTTGCGTGATCCGGA
GAACCAGGAGGAGGAGGGCCTGCTCAACGTGAAGGTGCCGAGCAGCGCGGCCGACGATGACTACAGCGATCCCGACCAGC
CCAAGGACCCCGACCAGTCCGACGGAGATGACCTCGTTATCCTCGGCCACTGATACGATCGATCGATTG---CGACACGA
TCGATCACGTGCGCCTGACGCGTAGCGTTACATTTCTTG------------------------------------TTTAT
TTGTAGCTCATTTTTTGGTGTGTTAAGTAGATAGTGTGCTTGGACCGCGAACGTGTGTTTC----TAAAGATTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TAAAAGGATTTGGGCATTTGGTAAAGTCTGATCCTTATA---------CTCGATTAATCTGCGGT
ACGCCATTCCTAGTCTCAAGTTTTTGGTTTGATATATGGCAATAAGAT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGGTTGAATGAGA
AGTCAAAGATACAAAACTTGTCTCAACAAAGTAAATTATGCAACGCATATGTTTTCTCTCTAAAACTCTAAAGTATGATG
CAGCGCCAGT------GTTAGTGCGCAC-GATATAAGTAAATGTATATTTCATAGTGACC----TTGTATAAGTAAATGG
AGGGTTTCTCGCCAGTTTGGATTAAGTAGATTATGATTTGTGTTACTTCTGTAAAACACTTGGTGTGGCTGAATGGTCAT
CTTTTGCTGACTTTTACTCCTTCCG-CGGTCTCACACAAGGCTATCTTTTGTCTCCGTGTTTATTTCCTTTAGTGGCTGA
TGTGCTTTTGCTGTTGTTAAATGATGTCTCTAGTAGAGGTGGCACCCAAGATTTTTGTTTGTGCACACGGGCAGCTAATA
GCTCGGATTTGCTATTTGCAAATGATAGTGTGTTGTTCTTTAAGGAAAAATTTGAGCAAA------TTTTGACCATTCAA
ATGATTTTGGCCCTCTATGAAGAAGGGACGGGTCAATTGTCGAGTCCATCTAAGTGTTCCATTTTGTTTGGAAAAACTG-
-TAATTTGGAAACC-CAAGCTTCTATCATGGTCATTTTCTGCTGATGGTTTTGACGATAAGTACCTTGGGTTACCGGTTC
CACAAGAAAGAATGAAGGTGGCTAAGATTCACTCTCTGCGAAAGATAAATTT-ATAAGAGGCTTTCGGACTGGATTGAGA
AATTTGCTTCTAGTGGTACAAAAAAGA-TATAATTAATTCAGTCATTCAGGCTTTACCTATTTGCGCGAGGTTTTTTTTT
TAAAATTCTGGTTGTGTTGTGTGAGAAATCATCCGGTTAATTAGGATTTTCTCATGGGCTGATGACAAGGAGCAGAGGAC
GACTCATTGGCTTGACTGGGATAAATTAACGAGATCATAGGGAGGTGGTGGGATGGCTTTTCGGGATCTCATG-TTGTTT
AACAAGGCACTTCTAGACAAACAGGATTGTCATTTATT-GAAAAATACCGAGTCCCTTTGTGCTAAAGTGTTGATGGCTA
AGTACTATTC--ATGGTCATCTTCTTGATATT
>chr6B_633
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGTCTTAT
GTTGCCACAACCACATGATTACGTGATTGAAATTCGAAGTATGAGTGAAAGGGTGAAGGGGTCGTGAGTTGGATGTGTCA
TTGGCCACAATGTCCGGCTTGGATTGGAGAGGCAACGATAACGAGGTGGAAGAAGAGGAGTGGTTGAACGGTAAAAATGT
CAATAATGTTGTTTGGTGTACATGAGGATCACAAAGATACAGAAATGCTAAAAATCTAACGTCAGATTTTTAAGTATGGC
AAATCAAACTT-TTTTGATGGCAAATTACGTGTCGCGAGCATGGCAGTTTCCTTCAGCAAGCATGGCAAATTCTGGCAAA
AAAAAAACTTAACTTGTGAAGATGCTG------------------AAACATTTAATTAGCCATGTGTTAAAAATCGGACA
TCAGATTTGTAGCGCGGTCCTAATGATATATGTTTGACATGATTGTTGTTGCACTAATTGAATAACTATACCCCATTACA
ACGCACGCGCAATTA-C------TGAGACAAAAATAGATGCTGGATTGCAGCGG----TTAGAAACTTGGAAGCTAATTA
CTA--------------------------------------------------------------------------TGG
A-GGGGAGGCCATGATCCCAGGACCGCTCGTTCATTCTTCCTTGAGAAAAACATGCGTGACCACCAGAAGAAATGGAAAG
AAAGGGACTCGTGATTTGCGGACTACCGGTGTCTCCTCAAGACTAGGCCCCGGCTAGCTGAAGCTCCACCATGCAATCCG
CAGAACGCGCAGAGCTGCAAGCAAATCCACACCGATTTAACCTTCCTCTTGATCGATCGCACGCACGGCTACAGTTCTCG
CGTCT-CCCCTAAAAGAAGTGCAATA------------------------------------------------------
------------------------------------------TAATTCTCATCGTCGTCG---AAGCTCACCCATGGCGG
CGTCCGCGCGCACATGCCTGGTGGTGGCAGCGCTGGCGTGCGCCCTAATGCTGGCGCTGCGCA------CGGCGGATGCG
CAGGCGGACGAGGCCCAGAAGCCCAAGTGCGCTCCGGGCGCCGCCATGCCGTGCCGTGTGGGCGCGTTGCGCGACCCGGA
GAACCAGGAGGAGGAGGGCCTGTTGAACGTGAAGGTGCCGAGCAGCGCGGCCGACGACGACTACAGCGATCCCGACCAGC
CCAAGGACCCCGACGAGTCCGAGGGCGATGACCTCGTCGTCCTCGGCCACTGATACGATCGACCGTCCGGCCCGACACGA
TCGATCATGTGCGCGTGGCGCTTAGCATTACATTT-TTTATTTTTTTGAACACCGCTTAGCATTACATTTGTTATTTATT
TTTTAGCCATCTTTTGGTGCGTC-AAGTAGATAGCGTGCGTCGACCGCGAATGTGTGTTTTCTAATAAGGTTTA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTAAGGGATTTGAACATTTGGTATGTGTGATCTTACACGATTGATGACCTGGATTAATCTGCGGT
ACACCGTT--------------TTTGATTCAAT--ATGCTAATAGGATCAATGATTAGGACTTAGATGTGCAATACTTAT
GGCACATCTAGATGTGCTTTAGCAATTGTTTAGGACACATCTAGATGTGCTTTAGCAATTGTCTAGGACACATCTAGATG
TGCCTTAGTTATTGCACATCTAAGTGACACAAGCAAGCATAGAAAGGAAAAGGAAAAAAAAATTCACACGAATTTTCACA
TAAGATTAATGATATAGGACTTAGATGTGCAATACTTATGCCACATCTAGCTGTGCTTTAGCAAAACTG-----------
-ATCAAAGATACATAAATAGTCTCAACAAAGTA------------------------------------------GGATG
CAGCGCCAGC------ATTAGCGCACACTGATATAAGTAAATGTATATTTCATAGTGACCGACCTTGTATAAGTAAATGG
AGTGTTTCTGGCCAGTTTGGATTAATTAGATTATGATTTGTATCACTTCAGTAAAATACTTCGTGTGGCTGAATGGTCGT
CTTTTGCAGACTTT-ACTCCTCCCG-TGGTCTCACACAAGGCCAACTTTTGTCTCCGTGTTTATTTCCTTTAGTGGCTGA
TGCACTTTTGTTGTTGTTAAATGCTGTCTCTAGTGGAGGTGGCATCCAAGATTTTCGTTTGTGCACACGGGCACCTAATA
GCTCAGATTTGCTATTTGCAAATGAAAGTGTGTTGTTCTCTAAGGAAAATTGTGTGCAATTTTTGTTT------ATTCAA
ATGATTTTGGACCTCTATGAAGAGTCCATCTAAG---TGTCGAGTCCATCTAAGTGTTCCATTTTGTTTGGAAGAACTAT
ATAGTTTGGAAACCACAAGCTTCCATCATGGTCATTTCCTGCTGATGGTTTTGAGGATAAGTACCTTGGATTACCGGTTC
CACAAGGAAGAATGAAGGCGGCTAAGATTCACACTTTGCAAAAGATAAATTTCTTAAGAGGCTTTCAGACTGCATTGAGA
AATTTGCTTCTAGTAGTGCAAAAGAAATTATAATTAATTCAGGCATTCGGGCTTTACCTATTTGCGCAAGTTTTTTTTTT
CAAATTTCTGGCTGTCTTGTGTGAGAAATTATCCAGTTAAATAGGATTTTCTCATGGGCTAATGACAAGGAGCGGAGGAT
TACTCTTAGTCTTGACTGGGATAAATTAACGAGATCATAGGGAGGTGGTGGGATGGCTTTTCGGGATCTCAGATTTGTTT
AACAAGGCCCTTCTAGACAAGTAGGCTTGGCATTTATT-GGAAAATCCCGAGCCCCTTTGTGCTAAAGTGTTGATGGCCA
AGTACTATTCTCATGGTCATCTTCTTGATATT
>chr6B_1305
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GGAAAG
AAATTGACTCGTGTTTTGCGGACTAGCGGTGTCACCTCAAGACTAGGCCCCGGCTACCTCAAGCTCGGCCACGCAATCCG
CGGAACACGCAAATCTGCAAGCAAATCCACATCGATTTAACCTTCCTCTTGATCGATCGCACACACGACTACAGTTCTCA
AG----CCTCTAAAAAAAGTGCAATA------------------------------------------------------
------------------------------------------CAATTTTCATCGTCGTCG---AGGCGCACCCATGGCAG
CGTCTGCGCGCACATGCCTGGTGGTGGCAGCGCTGGCGTGCGCGCTAACGCTCGCGCTGCGCT------CGA-GGACGCG
CAGGCAGACGAGGCCGAGAAGCCCAAGTGCGCTCCGGGCGCCGCCACGCCATGCCGCGTGGGCGCGTTGCGCGACCCGGA
GAACCAGGAGGAGG---GCCTGTTGAACTTGAAGGTGCCGATCAGCGCGGCCGACGACGACTACAGCGATCCCGACCAGC
CCAAGGACCCCGACGAGTCCGACGGCGATGACCTCGTCGTCCTCGGCCACTGATACGGTCGACCGGCCGCTCCGGCATGA
TCGATCATGTGCGCGTGGCGCTTAGCATTCCATTT-TTT------------------------------------TTATT
CTTTAGCTATTTTTTCGATGCGTTAAGTAGATAATATGCGTGGACCGCGAACCTGTGTTTTCC---GAAGACTATAATGT
ACAATGATTAGTCTTATCTTAAGTTTTTCATGTAACTGAGAGATGACAAAAAAAATGTTTACAATGGGTCATCTCCTAGC
CTTATCTTCAATAACTAGCTATTCCTAAAAATATGATGAGACATATTGTGCTAAGAGATCATCTCTTGTCTTGTCTTAAA
TAAGAGAAGACAAACCTTTACTTATGAGTTCTTTCTCCTTCACCTCATCATTTATTCTACATGGCACTCCTAAGATAGCA
TCATTGTACATGCCCTAAAGGGATTTGGACATTTGGTAATGTCTGATCCTTA-----------CTCGATTAATCTGCAGT
ACGCCATTCCTAGTCTCAAGTTTTTGGTTTGAT--ATGGCAATAAGAT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TG-----------
-GTTGAATGAGAAGTCA----------AAAGTAAATTATGCAACACATATTG-TTTTCTCCAAAACTCTAAAGTAGGATG
AAGCGCCAGCGCCAGCGTTAGCGCGCACTGATATAAGTAAATGTATATTTCATATTGGA----CTTTAATAAGTAAATGG
AGGGTTTCTCGCCGGCTTGGATTAATTAGATTATGATTTGTGTCACTTTGGTAAAGTACTTAGTGTGGCTGAATGGTCGT
CTTTTGCAGACTTTTACTCCT-CCGGTGGTCTCACACAAGGCTATCTTTTGTCTCCGTGTTTATTTCCTTTAGTGGCTGA
TGCGCTTTTGTTGTTGTTAAATGATGTCTCTAGTAGAGGTGGAGCCCAAGATTTTCGTTTGTGCACACGGGCACCTAATA
GCTCGGATTTGCTATTTGCAAATGAAAGTGTGTTGTTCTTTAAGGAAAATTTGGAGCAAA------TT------ATTCAA
ATGATTTTGGCCCTCTACAAAGAAGGGACATGTCAATTGTCGAGTCCATCTAAGTGTTTCATTTTGTTTGGAAGAACTG-
-TAGTTTGGAAACC-CAAGCTTCCGTCGTGGCCATTTTCTGCTGATGGTTTTGAGGGTAAGTACCTTGGGTTACCGGTTC
CACAAGAAAGAATGAAGGCGGCTAAGATTCACACTTTGCAAAAGATAAATTTCTTAAGAGGCTTTCGGACTAGACTGAGA
AATTTGCTTCTAGTGGTGCAAAATAAATTATAATTAATTCGGTCATTCAGGCTTTACCTATTTGCACAAGGTTTTTTTTT
-AAATTTCCGGCTATGCTGTGTGAGGAATTATCCAGCCAATTAGGATTTTCTCATGGACTGATGACAAGGAGCGGAGGAT
TACTCATTGGCTTGACTGGGATAAATTAACCAGATCATAGGGAGGTTGTGGGATGGCTTTTCGGGATCTCAGG-TTGTTT
AAGAAGGGCCTTCTAGACAAGCAAGCTTGGCATTTATTGGAAAAATCCTGAGACCCTTTGTGCTAAAGTGTTGATGGCTA
AGTACTATTCTCGTGGTCATCTTCTTGATATT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------
S--------------------S--SS------------------------S---------SSS-----SS----------
--------------S-S--S-------S------------------------------------------SS-----SSS
S-SSSSSS-----------------------S--------SS---------------S------------S-SSSSS-SS
-SS-S--SS--S----S--S--------------S--S----S-SSSSSSSS-SSSSSSSSSSSS-S-SSSSS-S--S-S
SSSSSSSSSSSSSSSS-SSSS-----------------------------------------------------------
--------S---S--------S---------------------S----------------S---------S---S-----
-------S-S-------SSSSSS------------------------------SSSSS---------S-----------S
----------------S---S-SSSS--SSSSS-SS-----------S---------S--S-------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----S-------------S------------------------------------------------------------
-----------------------------------------------------S------SSS-----------------
-------------------------------------------------------------------------------S
------------S-----------------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------S---------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------------------------S-S---------------S------------------
-----S--------------------------S----------------S------------------------------
----------------------------------------S--------S-----------S------S-----------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----------S-----------------------------------------S----------------SS------
--------------------------------------S-----------------------------------------
-------------------------------------------------------------------------------S
-------------S-----S-----------------S-----------S------------------------------
-----S-----------------------------------------------------------------SS-------
---------------------------------S----------------------------------------------
-----------------S------------S-------------------S------------S-----S----------
-S-----------------------S------------------------------------------------------
---------------S----------------
>forward_41
---------------------CCCCTCTCTCCCTTGCTAGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------
>reverse_1115
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTTGCA
ACGCACGGGTAATT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_143
--------------------------------------------------------------------------------
-------------------------------------------CCCTCTAATTCTCCGGCGAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------
>reverse_1236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGGCGAGCCATGACTGAATA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_161
--------------------------------------------------------------------------------
-------------------------------------------------------------ACGATTAGCTCTGGATGGC
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>reverse_2886
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----TCAGCATTAGCGCACACTGA-------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
