>input_sequence_60796
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-------------------------------------------------------------------------ATGGCGT
CTCACACGACATTTTCTTGGATCACTTTGTATCTGCTGGCTGTCCTCCTAGCGCCGGCGAGCGCTCAAGACCCGACGGCC
GGGTTCACGGCCGTGAGCCTCAGCGAGAGCAACTTCCAGCTTCAGAAGCCGTACAACATGCCGAGCAGCGCACGGTATAG
CTTCGACGGCATGGTGCGGCGGATGTGGGTGCTCTCCTCCGACGAGCCCTTTTCGCCGCAGAGCGACACCAAGCCAAGGA
CGGAGATGAGGATGACTGTGAGTAATATA-TAACATGATCAATAATCACTCAT----CACATAGCTATATATGTAGATTG
CTAGTATATTCTTACTAATTTCAGAAGAGTTTTGCCGACAG----AAAAAACTGATTTCAAATATTTCAGAAGGTACGTC
ATTAATTCTTTTTAATTTTTAGAATGCATGCAACCCATTTATGTCAATTAGAGTATTTATTTATTTCTTGCGAGGAGAGG
GAGGGAAGAAAAGAGAGATTGGCCCAGTAGAATTTTTTTTATAGAAAAGAGGGAGACAAAATGTTTGAGTGAACAACACA
AACCAATAAAAAGGGCAAAAAACGAGGAATAGAAGAGAAAATGACAAACAAAATTATAATGTCACACTTAGATGTGCTCT
ACATCTATATGCGCCTAGACGTTCTCTTTCTTCAAGCGACTGACTCATGTATCTTG-GCATTCCGTGTGATTTAGGGACA
CGACTACTCTTCGGGCGTGTGGCAATTCGAGGGCTCCGTGTACGTGCCATCGGGCACGTCGGGAGTGTCCATCATGCAGG
TGTTTGGCGGCGGCGAGACGGCCACCACGTTGATGCTGCACGTCTACGATGGCGCGCTGAGGTACTACAACCAGAAGCCC
GTCGAGGACAACGTCTACGACCGGTGGCTCCGGGTGAACGTGATCCACGACGTCGGGGCGTCGAGACTCACCGTGTTCGT
CGATGGCGAAAATAAACTGAGCGTCGCCGGCCGTGGCGGCAGCTCGCACTACTTCAAGTTCGGCGTCTACACGCAGAGGG
ACGCGTCCAGCCGCATGGAGTCGCGCTGGAAGAGCGTCAGGATCCTCAAGAAAAACTGA---------------------
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>chr1A_1_TraesCS1A01G043700
CCTTGAGAGCGTTGTCATGAAGTTTTGGTGTCCTATGGCGTTGTTGTATTTAGGCCTTTCTCTGTTTTTTTTAGGCAACA
TGGTCGTATGTGTTTATTACTCCGGAGTGTGTGTTGTAAAAAGTCTTTTTCATGTAATTCAACCGTTTACTTTGGTTTAT
GCTTTATTTATAAAGCGGTGCTTAAGCCTAGTTT-GAAAAAGACATTATCATTGTGCATTTTTTCCAACAATCTGCCGGA
CAGAGGCGAATAGGATTTTCCGTGATGCATGGCCAACCATGTGGAAGAAATCGACACCGTGCGCATCGGGACGTCAGCAC
ACTGCTGCAATTCTGTGTCTCGATCATGCGCCCCCGCAAC----------------------------------------
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------------------------------------------------------------CCGCGGCTACCACCCTTGAC
CTGTCTATCTTAGCCATTGTGGACTGGCCTGATGTGGATGCTGTCATGCGGTTGAGGACGAGACAAC-------------
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---------------------------------------------------------------GAGTAGTATTCTTTGCA
CAGACCCGGCAGAAATTCGGCTCCTATAAATGCTACTCCCTCCGTTTCAAA-----------------------------
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------------------------------------ATATAATGCCTTTTCTATTTCTGTATTTTAATTTTGATCATAAA
TTTAACCAACGAGACCAACTACAACAGAAGCAAAAGTTATACCAGTGAATTCGTGTTCAAAAGAAGTTTTCAATTATATA
ATTTTTTTCTCGCACCGCAGTAGGTCTCGTTGATTAAATTTATGATCAAAGTTAGACCTCGGAAAACGCGGACACACTAT
ATTTTAAAATAGAGGGAGTACCGGTAGCAAGGGTGTAGCATTTATTCCCTAGCCGCCGCCCCTTGCACATTAAGTCAAGG
ATATGAGCAGAGGTGACTGTT------------------------TTGTTGGTTTTTGCTGAAACAGATCAGTGTATGGG
GTCACGTGTA-------TTTTTGAACTGAAAATAATAATAATAAAATAGCATCAAGTCGAGCGGACCAGCTCCATTAACC
ATTTGTATGTCTATATAAACAGCAGAGCAACACGCAGATAGGCAAAGCAGAAGGTACACGCAGCACGCAGACAATGGCGT
CTCACACGACATTTTCTTGGATCACTTTGTATCTGCTGGCTGTCCTCCTAGCGCCGGCGAGCGCTCAAGACCCGACGGCC
GGGTTCACGGCCGTGAGCCTCAGCGAGAGCAACTTCCAGCTTCAGAAGCCGTACAACATGCCGAGCAGCGCACGGTATAG
CTTCGACGGCATGGTGCGGCGGATGTGGGTGCTCTCCTCCGACGAGCCCTTTTCGCCGCAGAGCGACACCAAGCCAAGGA
CGGAGATGAGGATGACTGTGAGTAATATA-TAACATGATCAATAATCACTCAT----CACATAGCTATATATGTAGATTG
CTAGTATATTCTTACTAATTTCAGAAGAGTTTTGCCGACAG----AAAAAACTGATTTCAAATATTTCAGAAGGTACGTC
ATTAATTCTTTTTAATTTTTAGAATGCATGCAACCCATTTATGTCAATTAGAGTATTTATTTATTTCTTGCGAGGAGAGG
GAGGGAAGAAAAGAGAGATTGGCCCAGTAGAATTTTTTTTATAGAAAAGAGGGAGACAAAATGTTTGAGTGAACAACACA
AACCAATAAAAAGGGCAAAAAACGAGGAATAGAAGAGAAAATGACAAACAAAATTATAATGTCACACTTAGATGTGCTCT
ACATCTATATGCGCCTAGACGTTCTCTTTCTTCAAGCGACTGACTCATGTATCTTG-GCATTCCGTGTGATTTAGGGACA
CGACTACTCTTCGGGCGTGTGGCAATTCGAGGGCTCCGTGTACGTGCCATCGGGCACGTCGGGAGTGTCCATCATGCAGG
TGTTTGGCGGCGGCGAGACGGCCACCACGTTGATGCTGCACGTCTACGATGGCGCGCTGAGGTACTACAACCAGAAGCCC
GTCGAGGACAACGTCTACGACCGGTGGCTCCGGGTGAACGTGATCCACGACGTCGGGGCGTCGAGACTCACCGTGTTCGT
CGATGGCGAAAATAAACTGAGCGTCGCCGGCCGTGGCGGCAGCTCGCACTACTTCAAGTTCGGCGTCTACACGCAGAGGG
ACGCGTCCAGCCGCATGGAGTCGCGCTGGAAGAGCGTCAGGATCCTCAAGAAAAACTGATATGTCCGATCGCCCTCACAG
CAGCTTCGTCCTTGAAAGTTTGTATTGTAAGCAGCTCAGCGCGTATTTTGGTAAGAGAAT--------------------
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---------------------------------------------CATGCTAAAATTTGCCATACAGTTAACTAATTA--
---------------------TACTGTTATAAGTCCCACACTCATCTATTTGTTGTGCTTTTGTACGTGCTGAAGCCCGA
AAAGTG---------CCCATGCACCAAGTTGCTTAGCCAATT--AGCGGTCAACTGCAACTTTGCTCCATTTGTTTGACG
GAACCAAGCATGCGTGCAGGCGCGGAGCCATGCCTTGTACCGACGACAGACCCTGACTTATACTACCATTAAAGTATACT
CCCTCCTTCCATCTATATAGGGCATAATACATTTTTCAAGGCTAACTTTTTTTTTGCGGGAAAGGAACTTTTCATTAATC
AACTATGATGGTTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAAATTCCGGAGCCAGCATGTCGTGCGCTGT
TGCGAGTGGCCCATACAAGCTAGGGTGTGGCTCGCCAAATTTGCGTGCCTGCTGAACTTAGCTAGACTAATGTTCCTTTC
TTGAGCTAGAACTCTTCTGATCTCATTAACCCTGTACGCATACCTCGACTGGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTTGCCACAATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAATGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAAGACCCGTGTCGCGGCAAAGATGACATCACCTTCATGATCATG
TAAAATCATGCCAGCCCCAGCCGTGCCACTTTCCTTAACAAAAGCACCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCCCCTAGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCACCTCCGGGTGCTGCTGTATCGCAAG
>chr1D_138
TTCAG---------------------------------------------------------------------------
--------------------------------------------------------------CCGTTTACTTTGGTTTAT
GCTTTATTTATAAAGAGGTGCTGAGGCCTCTTTCGGAAAAAGACATCACCACTGTGTG-TTTTTTCATCAATCTGCCAGA
AAGAGGCGAATAGGAATTTCCGTGATGCATGGCCAACCATGTGGAAGAAATCGACACCGTGCGCATCGGGACGTCGGCAG
ACTGCTGCAATTCTGTGTCTCGATCATGCGTCCCCACAACCC--------------------------------------
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--------------------------------GTGTAGCATTTATTCCCTAGCCGCC-CCCCGTGCACATTAAGTTAAGG
ATATGAACAGAGATGACTGTT------------------------TTGTTGGTTTTTGCTGAAACAGACCAGTGTATGGG
GTCACGTATT-------TTTTTGAACTGAAAACAATATGGAT--AATAGCATCAAGTCGAGCGGACCAGCT-------CC
ATTTGTATGTCTATATAAACAGCAGAGCAACACGCAGAGAGGCAAAGCAGAAGCCACACGCAGCACACAGACAATGGCGT
CTCACACGACATTTTCTTGGATTGCTTTGCATCTGCTGGCTGTCCTCCTAGCGCCGGCGAGCGCTCAAGACCCGACGGCC
GGGTTCACGGCCGTGAGCCTCAGCGAGAGCAACTTCCAGCTTCAGAAGCCGTACAACATGCCGAGCAGCGCGCGGTATAG
CTTCGACGGCACGGTGCGGCGGATCTGGGTGCTGTCCTCCGACGAGCCCTTTTCTCCACAGAGCGACACTAAGCCAAGAA
CAGAGATGAGGATGGCTGTGAGTACTCCATTAACATGATCAACAATCACTCATGCATCACATAGTCATAAATGACCATGA
TAT-----------------------------------------------------------------------------
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-------------------------------------------------------------TCACACATAAATG------
---------------------------------------------------TCTTG-GCATTTCTTGTGATTTAGGGATA
CGACTACTCTTCCGGCGTGTGGCAATTCGAGGGCTCCGTGTACGTGCCATCGAGCACGTCGGGAGTGTCCATCATGCAGG
TGTTTGGCGGCAGCGAGACGGCCACCACGTTGATGCTGCACGTCTACAATGGCGCGCTGAGGTACTACAACCAGAAGCCC
GTCGAGGACAACGTCTACGACCGGTGGCTTCGGGTGAACGTGATCCACGATGTCGGCGCGTCGAGATTCACCGTGTTCAT
CGATGGCGAAAATAAACTGAGCGTCGGCGGACGCGGCGGCAACTCGCACTACTTCAAATTCGGCGTCTACACGCAGAGGG
ACGCGTCCAGCCGCATGGAGTCGCGCTGGAAGAACGTCAGGATCCTCAAGAAAAACTGATATGTCCAATCGCTCTCACAG
CAGCTT--------------------------------------------------------------------------
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>chr1B_138
TTCAG---------------------------------------------------------------------------
--------------------------------------------------------------CCGTTTACTTTGGTTTAT
GCTTTATTTATAAAGAGGTGCTGAGGCCTCCTCTGAAAAAAGACGTCACCACTGTGTG-TTTTTTCATCAATCTGCCAGA
AAGAGGCGAATAGGAATTTCCGTGATGCATGGCCAACCATGTGGAAGAAATTGGCACCGTGCGCATCGGGACGTCGGCAG
ACTGCTGCAATTCTGCGTCTCAATCATGCGTCCCCGCCTCATTTGGTTGCCGTGGATCCCGGGGGGGTCCCGGCCTTATC
CCTGGGGGAATAAGCCACGGGCCGAGTTGACCCGGGGCAGCCCACGGCGTCATTTGGTAGCGCACCGGAGCAATTCCCTG
ATCTCGTCAGGTCGGGCAGGAAATCCTCCAGAACCGACGACGCCGACTCTATCCTCCCGAGCTTGTGCCTTCGGCAGCCA
CCCGCGCCTCCGGCCAAGAGCTTCTCCCCCCGCCGGCGACGTCACCCCCTCTCTCCTGCCAGGATCCTCTGCCCGGTGAT
GGCGCCGGCCCAGAGGTTGGGTTTTACTTCCGGCGAGATCGACTACCCCTCGCAGCTCATTTCTCCTCAGGTGAACAGCA
ATGAGCTAGCGGTCACCTTCCTCGTCCTCCGAGCCAGGTTAGCCCGCTCTTCTTCCTCGTCCACTACTACCACCTATTTG
ATGCCTCGGTTAGCACTGATGATATTGCTCCAGATCCACGAACCTGAGCCGCCTTTCCTCATTTTACAGCTAATCAGAAT
CTTGGAACTCTCCTACCATTATCAAGTTAACGGTGAGCACAATCTCTTCCTTTCACTTCTCCCCCCTAGATCTGCATGGT
GTTTTGATTGGTCAATTGGCTCTTGTGATTGATTGTGAGGTCTGATGCTATATTTTGGATCTTTCAAGGAACATTTTTCT
TGTTTGGACTCTTGTTACTACAGAGCAGAGCATTGCCTAATGTGTGGCAGTTTGTCTACAGAAGTTAGATTATTGGCTGC
ATACATTATAATTTAGGTGCAATTCAGAAGAATGTGGCAAATGCAGTGGATTTGCTGCATTTAATTACTGGTGAGTCTTG
TGAACTTTGGTTTAGGCAAGTTAATTGCTTTTGTGTAGACAGGCAAATACTAAACGTTTTTCTTTGTTAGATCCTTATGG
CAGTACATACTACAATTGTTTATTTTTATGCTTTTTTCATAGTTATAAATTTTCTATTTTTAGTTTTGGTATCCTCTGCA
ATTAAATTCACCATGGCATACTTTTTAGACAGCCTGTGCAGTTACATGCCATTATGCATCATACACTTTGCATAGCTCAA
TACTCTTCTTGTATCTATGGATATCATGATCTATTGATGTCAAGTTTGTTTCACACATGACAAAGGACACAACACCAAAT
AAATCGAGAAATATTCATCAACACCACTGACTTATGTCTTAGACTTTATTGGTTGAAGGAGGAAATTTCTGCGATGGAGA
GAACATAACGTGTGTAGACAGTTCATCTTATATTTTCTTGTTTTGCACTACATCCATCTTATCTTTATTTATTTTGCACC
ATTATTGATTGGAGTTTTATCTGAACCTGAGTTTTACCTGAACCTGAATTTTATCCATCTGACTGTTTGTAGATCCACGA
GCCTTTGTTTCTGAACTCTGCCCATTCTTTCCTTTGCAATAACATGAGTTATTCTGAATTGATCATTTGATGTTACCCTA
GCAGTGCCTCCATAGAAAATGAAATCTAGTTGATGTTATCCTTTGATCAACTTCTGCAAACATAAGGAACTAGTTGGTCT
CACTCCAATAATACATGGATTACCATTTGGTCTATGTGTTTAGATGAGGGTCACTATATACATCTGCAGATTGGCATTTA
TCATTCAGATTTTCAACTTACATTTTCAAGGTATGTGATTTGATTTATCTGGAGGTAAGTTGTGCTTTCTGTCGGTTGCA
ATTACTATATGTTCCAAGTTGTGGCAACAATACTTTGGAATTTTTTTTGTAATCATTCCGCTAGAGTAGTATTTTTTTAT
TATATGATTGCAGAAGTTGTATATGGATGTACTGCGGGCACCAAGAAAGGGTAGTATATGGATGTACTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAATTTTTGTATTTCATGTTTCCTAATTTATACGTATAATCTATAATCTCAGTAGTTTAG
TAGGCTAATCCCTATTTCTTAACAATAAGATCGTTGTAATTGAATTATCGGCTTAAGAGTGTCACCAGCGGTCGCAAAAG
TTATTTTTTGTTCTGCTGTATTAGTGTTAAGATCTGTATGAGTATGTCTTAGTCAGTATTGGTTTCAGATAACCAATCTG
GACTTGCCATTGGGGTCTTTTTCGGCGATTTTGACTTTTGCACATAAAAGATCGGAACTGAAATGCCATTGCGATTTGTA
TTATCATGTCATATTAGAATCTGTTAATAATTTCTCATATGCTTCTCTTTCCCAGCTTATGATCCTTCATTTGTATAAAT
CAGGGGGGCTACACTTCTGAGACGAGGCTACAACACAATTTTTGTTGTAGTCAGCTACATTCTTACACCTCTAGCTCACG
AAGGTCGTAGTCCCATTTGGATCGCCACTCAGCACGAGTGGAGTGACACTTGATACCTAAGAAATGTTGCCTCTCTATGT
TATGTGACATCTTTAGTTCTGACTATATTCTCATGAGTATCCGAAGATGATAGTGTAAATCAGTGATTATTTATACATTT
GCAAATTCCTTGATTTTCTGTGATTTATAGAATTATATGTAATGTCTTGAATATATTTGTGTTTTTTCGTAATTATTCAT
GGTATTTTTCTGAGCTGTTTCAGAATTGATTGTGT--------------------------AGAATCCTTCATTTTTGTG
TTTTTTTAATTTATCTTCTTCTGGGGATTTTGCCCTCTTCCACCTGTTGCCATTTGGTAACGTGGACTTTGGGAGATTTC
CCCCGTGGGAGAAGGGGATCCTACCTAGACCCTCAAAATCCCCC--------------------------TAAGTCAAGG
ATATAAACAGAGATGACTGTTGAGTTCAAAACAGAGATGACTGTTTTGTTTGTTTTTGCTGAAACAGATCAGTGTATGGG
GTCACGTATTATTATTATTTTTTAACTGAAAAGACTGAGTA---------------------------------------
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--------------------------ACA-TTACCTGAACAATATAGGTAGTGTTGTTAG--------------------
-TAGTATATTCTTACTAATTTCAGGAGAGTTTTGCTCACAGAAAAAAAAAACTGATTTCAATCTTTGTGTTAACCGACTG
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---------------------------------------------------------------ACATATAAATG------
---------------------------------------------------TCTTTTGCATTCCGTATGATTTAGGGATA
CGACTACTCTTCGGGCGTGTGGCAATT----------------------------------------------ATGCAGG
TGTTTGGCGGCGGCGAGACGGCCACCACGTTGATGCTGCACGTCTACGATGGCGCGCTGAAGTACTACAACCAGAAGCCC
GTCGAGGACAACATCTACGACCGGTGGCTCCGGGTGAACGTGATCCATGATGTCGGCGCGTCGAGACTCACCGTGTTCGT
CGATGGCGAAAATAAACTGAGCGTCGCCGGCCGCGGCGGCAGCTCGCACTACTTCAAGTTCGGCGTCTACACGCAAAGGG
ACGCGTCCAGCCGCATGGAGTCGCGCTGGAAGAATGTCAGGATTCTCAAGAAAAACTGATACC------------CACAG
CAGCTTATCTGTTTGTTTCCCCGTCGTGTATCCTTTGTACTGGTTGTTTCAAGTCCGAGCGCGTGTACTCACACGATCGT
CATCCTTCAACAAAAATTCAATAAAGCTAAAAATCTGACAACAGATTTTTTAGAGTGTCAGATTGAACGCACTTTGTGCC
GTTGGATATTATGCATAAATCTTCAGTGTAATTGGAGCACACTCATGGAGGGTGTCTTGGCTGCGGTTAAGGACTTCTTT
CCAACTGGTATTATGCATGAGGGAGTTAACTTCGCTTCTATTGTGCTTATACCCAAAATTTCTAACCCTATCAAGATGAC
CGATTACACACGATTACAGGCCTATAAGTCTCCGTAATGTGATCTATAAGGTTCTTTCGAAGTGTTTGGTAAATAGGATG
CGGCCCCTTTTGGATGATTTAATTTCTCCCAAGCAGAATGCTTTCATCCATGAAAGAATAATCACGGATAATGCATTTGT
CGCCTTTGAGTGCATTGACTATATAAAGCAGGAAAAGGATCCATCCGTTCCAAAATAAGCGAGACACTTATTTATTCTGG
GACGGAGGGAGTATTATATAGTACTATTATAAGTCTCACACTCATCTGTTTGTTGTGCTTTTGTACGTGCTGAAGCCCGA
AAAGAGCCCATGTACCCCATGCACCAAGTTGCTTAGCCAATTTTAGCGGTCAATAGTAACTCTGCTCCATTTGTTTGACG
AAACCAAGCATGCGTGCAGGCGCGGTGCCACGCATTGTACCAACGA----------------------------------
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>chr1A_2461
TAAT----------------------------------------------------------------------------
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----------------------------------------------TTTTTTTTTGCGGGAAAGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCAACAATGCTAGCTATCTCCCTAGGGGAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAAATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCCATTTCAACAAGCAGCGGCAGGTTAGTCCAATGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGGCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCGGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAAGTCAATCACCTGCTTCCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr3D_2461
TAT-----------------------------------------------------------------------------
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---------------------------------------------CTTTTTTTTTGCGGGAAGGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCCTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACTCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ATAGCTCGCCACAATCCGTTTCAACAACAAT-GGCAGGTTAGTCCAGTGGAGAGCAAGTTGTAGTCCTTCATCCAGTGCT
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGTGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr3B_2461
TAACT---------------------------------------------------------------------------
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------------------------------------------------TTTTTTTGCGGGAAAGGAACTTTTCGTTAATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGGAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGTATACCTCGACCAGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCAGTTTCAACAAGCAGCGGCAGATTAGTCCAGTGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTTGGCTTCTAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGGTCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCACCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGCGCGT-GCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGTGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGATGCTGTATCACAAG
>chr3D_2463
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--------------------------------------------ACTTTTTTTTTGCGGGAAGGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAGTGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAA-GACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGGTGCTGTATCGCAAG
>chr4D_2466
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-----------------------------------------------TTTTTTTTGCGGGAAGGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAAACTCCGGAGCCAGCATGCCGTGCGCTGA
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTTTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAGTGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr5A_2466
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-----------------------------------------------TTTTTTTTGCGGGAAAGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGGAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAAATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACTATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAATGAAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAAATGACATCACCTTCACGATCACG
TAAAATCATGCCAGCCCCAGCCGTACCATTTTCCTTAACAAAAGCGCCATTAATATTAAGTTTTGCATGGTTTGCATGGG
GAACCTCCCAGCGCGGCGCTACTGTTATTGCATGTG--CTCTTCGGCATGCTTCATGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr7D_2467
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------------------------------------------------TTTTTTTGCGGGAAGGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAAATTCCAGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCTAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCATTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAGTGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCATAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAAAATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCCGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr4A_2467
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------------------------------------------------TTTTTTTGCGGGAAATGAACTTTTCATTGATC
AACTATGATGATTACAGTCAGATTCAACAATGCTAGCTATCTCCCTAGGGGAATTCCGGAGCCAGCATGCCGTGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTATGGCTCGCCAAATTTGCGTGCCTCCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ACAGCTCGCCACAATCCGTTTCAACAAGCAGCGGCAGGTTAGTCCAATGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCCCAGCCGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTA-TGCATGGTTTGCATCGG
GAACCTCCCAGCGCGGCGGTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCTTGAGACGTCAATAACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>chr5D_2471
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----------------------------------------------------TTTGCGGGAAGGGAACTTTTCATTGATC
AACTATGATGATTACATTCAGATTCGACAATGCTAGCTATCTCCCTAGGGAA-TTCCAGAGCCAGCATGCCGCGCGCTGT
TGCGAGCGACCCATACAAGCTAGGGTGTGGCTCGCCAGATTTGCGTGCCTGCTGATCTTAGCTAGACTAATGTTCCTTTC
TTGAGCCAGAACTCTTCTGATCTCATTAACCCGGTACGCATACCTCGACCGGTCTTTATCTTTCGACTGCACCATCTTTA
ATAGCTCGCCACAATCTGTTTCAACAAGCAGCGGCAGGTTAGTCCAATGGAGAGCAAGTTGTAGTCCTTCATCCAGCGCC
GCCATCTCGGCTTCCAAGGGATCACCACAGTTAAAAAGGACCCGTATCGCGGCAAAGATGACATCACCTTCATGATCACG
TAAAATCATGCCAGCCTCAG-CGTGCCATTTTCCTTAACAAAAGCGCCATCAATATTAAGTTTTGCATGGTTTGCATCGG
GAACCTCCCAGCGCGGCGCTACTGTTATTGCATGTGTGCTCTTCGGCATGCTTCCTGAGAGGTCAATCACCTGCTTTCCT
TTTGTCAAATCCGCCTCCGGGTGCTGCTGTATCGCAAG
>SNPs
SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
---------------S------S-S----SS---------------S-S--S----SSS-----S--S---------S--
S--------------S-----------------------------------------------------------S---S
------------------------------S-------------------------------------------------
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--------------------------------------------------------------S-SS--------SS-SSS
S--S--SSS-----SS-SS--SSS-S--SSS-SS-SS-S-SSSSSSS--S-SSSSSSSSS-SSSS---------------
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-------------------------------------------------------------------------S---SSS
S-S-SSSSSSSSS--S-S-SS-SSSSSSSSSSSSSSSS-SS-SSSSSSSSS-----------------------------
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--------------------------------------S-----S---SSS---S-S---S----SSSS-SSS-SS-S-S
SS--SSSSS-SSSS-SSSS-SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SSS----S--S-S-S
S------SS-SSSS-SS-SSSS--SSSSS---SSSSSS-SS-SSSSSSSSSS-SSSSSSSS-SSS--SSS-SS-S-S-SS
SSSSSSSSSSSS----SS-S-SSSSSSS-SSS-------------------------S----S-----------------
------S-----S-------------------------------------------------------------------
-------S-S----------------------S-----SS--SS---------------------------SSSSSSS--
--------------------------------------S--------------SS-----------S-------------
----------------------SS-----S--------------------------------------------------
-----------------------------------------------------------------------S--------
-----------S------------S--------S--------------------S--S-----------S--------S-
-S------------S---------S--S------------------------------------SS---S---SSS--SS
S-----------------------S----------SS------------------------SSS--SSSSS-SSSSSS-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S--S---SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------S-
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----S-----------------------
---------------------------------S----------------------------------------------
---------------------------------S--------------------------------S-----S-------
------SSSSS--SSSSSSSSSSSSSSSS-S-SSS-SSS-SS--SS---SSSSSSS--SS--------------------
--------------------------------------------------------------------------------
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----------------------------------------------S-S-S-----SS--S-S---S---SS--S-SS--
-------------------------S---------S-----------S--------------------------------
----S------------------------------------------------SS-S----S------------------
S------------------------S----S--S-------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
----------S----------------------------------------------------------S----------
------S-S----------------------------------------------S------------------------
------S-------------------------S----------------S------------------------------
------S-------------------------------------------------------------------------
-------------------------------------S-------S--------------------------------S-
----------------------------S---------------------------------------------------
-----S--S-----------------------------------------------------------------------
------------S-------------------------
>forward_833
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-------------CCATTGTGGACTGGCCTGAT-----------------------------------------------
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>reverse_4231
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----------------------------------------------------------------------CGAGGAGAGG
GAGGGAAGAA----------------------------------------------------------------------
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>forward_3932
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------------------------------------------------------------------------CGGTATAG
CTTCGACGGCAT--------------------------------------------------------------------
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>reverse_6126
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---------------------------------------------GTCGCGGCAAAGATGACATC---------------
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--------------------------------------
