>input_sequence_60716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGACAA
GGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGGGA
ACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
CCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGGTA
ACCAACTAAGCCGTCCA---------------------------------------------------GCGATCGATCAT
CGAGGTTGGCCATGGCGGCCGCCCGTGCGTGCGTGGTGATATACATGATCTAATTACAACTC---TTTGGGATTGGGGGG
AATGTAGATGGGCCGCGATCGCGTCCTACCTGCCACAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCGCCGCCGCCCTCCAGCTCCGCCGAGAC
AGCTGCCAACCTCCCCGGCGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAGCT
CCACGGTCGACCACGGCTGCTACGCGGCGTGCAGCAACCCGGAGGTCACCCAGCAG---ACGACGATCACCATGCGCCGC
TCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTCGA
CGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTCCT
TCGACCGCATGTCTGGCACCGGCGCCGGGCTGGTTTTCATCTCTGGCGTTCCGCAGCAGCAGCAGCAGCAGCCGGCGTTA
ATGGGGGGCATGAGCTATGATGACGAGGCCACCGGACAGCAGCAGCAGC---TCCATCATCAGTTGCCACTGTGTTCGAT
CGAGAAGTGGCTTCTCGACGAGGCGGCGGAGCAGGTCGCTGACCTGATGGACCTCTCCGACGGTGGCTGCTCCTCCCTGC
CATTGCTGTACTAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr5D_1_TraesCS5D01G149600
TAGATAGGCATAGGCCTTTGATCATGTTGTTGTCTACAACTTTGGAAAGCATCCTAGTGAGGACATCGACAACCATGTTG
AACAGCCCAGGGGCAGAGGATCACCCTGCCTCAAGCCCTTACCAATA---------------------TTGCTCAGTTTG
ACACATACAGAACCTCCATGAGTGGTTTTCCAAACCAAGTCCAACCATCTTCTATTGAATCCTCTAAGCTAAAGAGGTTC
GTTCAAACAAAAATCTACCTTATCAAAAGCTTTGCTTTTCATAATCAAGTTTAAGCACTACTCCTTTCTCCTCAGATTTA
ACCAGGGAGTGAATGACTTCATGTATTGTAACCACACTCTCAAGAATATATCTGCCTTTTATGAAGGCATACTGGTTGTT
AGATACAAGTTTATTTAAGAATTTGAATCTATTGGTCAGAACTTCAGTAAAAATCTTGAGGTGCATGTTCCAGTAGTTCT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GATAGGTAACGAAATTTAGGTA---CAC
TTTACCGTTTTGTTTCCTGCACATAGTAGAGTACGGCGGAGTGAAATGCCTTGACTAGTTATGGTAAGCTTGACGAGTCA
CTGGTGTGGTGGCTTGCATGCAGAAGTCTAGCCAAGGATCCGATTTAAATCCCACACAGTTGCGCTAGGATGCAGCAGTA
CGTACACCTCTAGCTCGTCCTTCCTTTAAGGCGTGGTGGGGC-GGGTCGGTTTCTATGATTCATGTGATGTCGTTGACAG
AAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCGTCAGAGAGCTATAG
AGTTAGACGATAGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCATCTCTCTCCTATATATACGGAGAGGGAGAGAG
AGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGACACGAGCGAGAAAGACGATCGAGCTGCCA
AAAGGAGAAGAGATCAAA------------------GAAGGTGGTCGGTCGATCATGGGGAGGCCGCCGTGCTGCGACAA
GGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGGGA
ACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
CCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGGTA
ACCAACTAAGCCGTCCA---------------------------------------------------GCGATCGATCAT
CGAGGTTGGCCATGGCGGCCGCCCGTGCGTGCGTGGTGATATACATGATCTAATTACAACTC---TTTGGGATTGGGGGG
AATGTAGATGGGCCGCGATCGCGTCCTACCTGCCACAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCGCCGCCGCCCTCCAGCTCCGCCGAGAC
AGCTGCCAACCTCCCCGGCGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAGCT
CCACGGTCGACCACGGCTGCTACGCGGCGTGCAGCAACCCGGAGGTCACCCAGCAG---ACGACGATCACCATGCGCCGC
TCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTCGA
CGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTCCT
TCGACCGCATGTCTGGCACCGGCGCCGGGCTGGTTTTCATCTCTGGCGTTCCGCAGCAGCAGCAGCAGCAGCCGGCGTTA
ATGGGGGGCATGAGCTATGATGACGAGGCCACCGGACAGCAGCAGCAGC---TCCATCATCAGTTGCCACTGTGTTCGAT
CGAGAAGTGGCTTCTCGACGAGGCGGCGGAGCAGGTCGCTGACCTGATGGACCTCTCCGACGGTGGCTGCTCCTCCCTGC
CATTGCTGTACTAGCCAGTACTA---CTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCAATGTCACTTTCCAGATA
CATAGTTAATCGTTTCTACAGTCATTTACATGCATACACATCCATATATATATAATAGAGAGGCCAAGTAA--TCTGTTA
ATTACATGTTCTAGCTTAGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGAGAA----------
------------AAGGAAGTTAATTATAGAGACGTTTACTAATGGTGCATATTACACTGGGGATGGGATGATGAGAAGAA
GGCCAGGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAA--ACGGGCGCGACGTGATGTGTGATCTGATCTGCAAGC
ATGATGCGACTAAGGGCTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGAAATTTATTTTTGTTTCTGGGTTATAG
TG-CAAGCTAGCTGAAGTGTTCCAGCTTAGCTTACCCGGTGTTGAATTGTACGGAGTATGAATATAAGTTAGTGAAGCCT
TCTGTTTTTGTCTCGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGATCATGTACGGTGTGACATGAAT
GCTACCCAAACTTGTTAGTGGAAAAAAAGCTAGAGAAAGGGGATATATCCCTGTCGGCAACGGCAGATGG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TCCCTGATCACATTCACTGCAAAAAAAAA----AGATGATCACCTTCA
CTGCAAAAAA---------------------ATTATAACAAAAAAATAATACTCCCTCCGTCCAACAATATAAGATGTTT
TTACAAGCTATGTTAGCTTGCAAAAACGTCTTACATTACCCGACGGATGGGGTAATACATAGCCTTTTCAGCCCGGATTA
TTTGGGGAAAAGATGAACCATTTCTCAATGCATGGTTAATTATTTAACTATCTGCTTCCAAAGAAAAACTACACAGGTTT
AAAAACTACTCCCTCTGTCCCATAATATAAGAACGTTTTTAACACTAGTGTAGTTTCAAAAACGTTCTTAT
>chr5A_1
TAGATAGGCATAGGCCTTTGAACATGTTGT---CTACAATTTTGGGAAGCATCCTAGTGAGGACATCGACAACTATGTTG
AACAGCCGGGGTGCAGAGAATCACCCTGCCTGAAGCCCTTACCATTAAGGAGGAACTCACTCTCTACATTGCTCAGTTTG
ACACATACAAAACCACTATGAGTGGTTT-TCAAACCAAGTCCAACCATCTTTTGTTGAATCCTCTAAGCTGAAGAGGTTT
GTTGAAACAAAAATCTACCTTATGAACAGCTTTGCTTTTC--------GTTTAAGCACTACTCATTT---CTCAGATTTA
ACCAGGGAGTGAATGACTTCATGTGTTGTGACCACA--CTCAAGAATATATCTACCTTATATGAAGGCAAACTGGTTGTT
AGATACA------------------AATCTATTGGTCAGAACTTCAGTAAAAATCTTT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TTAACGAAAAAGGGTTTTCCCCCGCTTTGTATTCCAAAGCAAC
CAACCGACACATCCAAGGATAGGTGCTGGGGCGGAAGCAGCACAGGCACACCCAAAAGAAACGAAAGAGAAACAACAAGA
GAAAAGAATGCCGACAACGGCGGATCGACGGAAACGAAGAAGCTTCACGACCACTGCGCCCACCGAAGATCTCCCACCAA
GCTCCAAGGCTCCGAAGCACCGGCACCAATCAGCACCTCCAAGAAGGACCGCGACGAAGATGACGCTGCTGCCAAGGGTT
TCCCCCGGTACACGACGAGGCGAGAGGAAAGGTCGCAATTTTATTAAAAGGCTAATAGGCCTAAATTTCTT---------
-------------------------CATGGTTGTTGCAGCGGGTTCCTTGAGGATAGGTAACGAAATTTAGGTAGTACAC
TTTACCGTTTTGTTTCCTACACATAGTAGAGTACCACGGAGTGAAATGCCTTGACTAGTGATGGTAAGCTTGACGAGTCA
CTGGTGTGGTGGCTTGCATGCACAAGTCTAGCCAAGGATCCAATTTAAATCCCACACAGTAGCGCTAGGGTGCAGCAGTA
CGTACACCTCTAGTTCGTCCTTCCTTTAAGGCGTGGTGGGGCGGGGTCGGTTTCTATGATTCATGTGATGTCGTTGACAG
AAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCGTCAGAGAGCTATAG
AGTTAGACGATGGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCGTCTCCCTCCTATATATAC----------GGAG
AGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGGCACGAGTGAGAAACACGATCGAGCTGCCA
AAAGG------------A------------------GAAGGTGATCGGTCGATCATGGGGAGGCCGCCGTGCTGCGACAA
GGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGGGA
ACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
CCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGGTA
ACCAACTAGGCCGTCCA---------------------------------------------------GCGAT-GACCGT
CGAGGTTGGCCATGGCGGCCGCCCGTGCATGCATGGTGATATGCATGATCTAATAACAACTCTTCTTTGGGTTTGGGGGG
AATGCAGATGGGCCGCGATCGCGTCTTACCTGCCACAGAGAACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTCAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCG---CCGCCCTCCAGCTCCGCCGAGAC
AGCCGCCAACCTCCCCGCTGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCCGCCTCCAGCT
CCACGGTCGACCACGGCTGCTAC---------AGCAACCCGGAGATCACCCAGCA---TACGACGATCACCATGCGCCGC
TCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTCGG
CGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCACCGACCCTTTCATGTCCT
TCGACCGCATATCCGGCACCGGCGCCGAGCTGGCTTTCGTCCCCGGCGTT---CAGCAGCTGCAGCAGCAGCCGGTGTTA
ATGGGGGGCATCAGCTATGATGACGAGGCCACCAGACAGCAGCAGCAGCAGCTCCATCATCAGCTGCCACTGTGTTCGAT
CGAGAAGTGGCTTCTCGACGAGGCGGCAGAGCAGGTCGCTGACCTCATGGAGCTCTCCGACGGTGGCTGCTCCTCCCTGC
CATTGCTGTACTAGCCAG---TA---CTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCAATGTCACTTTCCAGATA
CATAGTTAATCGTTTCTACAGTCAATTACATGCATACACATCCATATATGTATAATAGATAAGCTAAGTAATTTCTGTTA
ATTACATGTTCTAGCT-AGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAAAGAAGTTAATTAGAGAGACGTTTACTAATGGTGCATATTTACACTGGGATGGGATGATGAGAAGAA
GGCCAGGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAATAACGGGCGCGACGTGATGTATGATCTGATCTGCAAGC
ATGATGCGACTAAGGGTTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGGGAATTATTTTTGTTTCTGGGTTATAA
GTACAAGCTAGCTGAAGTGTTTCAGCTTAGCTTACCCGGTGTTAAATTGTACGGAGTATGAACATAAGTTAGTGAAGCCT
TCTGTTTTTGTCTTGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGGTCATGTACGGTGTGACATGAAT
GCTACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGATCACATTCACTGCAAAAGAAAA-------TGATCACACTCG
CTGCAAAAG-----AAGAAAACAACTCCCAGATTATAACAAAAAAATAATACTTCCTCCGTCCCACAGTATAAGATGTTT
TTACAAGCTAAGTTAACTTGCAAAAACGTCGTATATTACGGGACGGTGGGGGTAACACATAGCCTTTTCAGCCCGGATTA
TTTGGGGAAAAGATGAAGCATTTCTCAATGCATGGTTAGTTATTTAACTATCTGCTTCCAAAAGAAAACTACACGGATTT
AAAAGCTA---------------------------------------------------------------
>chr5B_5
----TAGGCATAGGCCTTTGATCATGTTGTTGTCTACAACTTTGGGAAGCATCCTAGTGAGGACATCAACAACTATGTTG
AATAGCT-GGGGGCAGAGGACCACCCTGCCTCAAGCCCTTATCATTAA----GAACTCACTCTCCACATTGTTCAGTTTG
ACACATACAAAACCACTATGAGTGGTTT-CCAAACCAAGTCCAACCATCTTTTATTGAATCCTCTAAGCTGAAGAGATTT
GTGCAAACAAAAATCCACCTTATCAAAAGATTTGCTTTTCATAATCAAGGGTAAGAACTACTCATTTATCCTCATATTTA
ACCAGGGAGTGAATGACTTCATGTATTGTGACCACA--CTCAAGAATATATCTGCCTTTTATGAAGGTAGACTGGTTGTT
AGATATGAAACTATTTAAGAATATGGATCTATTGGTCAGAACTTCAGTAAAAATCTTCAAGACACAAATTTTATCTATAC
CTACTATTAAAGGGAGGTGATATTCTTGATTTCGTCCTATTTTGTTTGGTCCCGCTTTAATTAATTTCATGTATGTGATT
TGGTTTCGTTACTTGCCACCCGTGTTGACCCAACGGAGGAAGCCCACCTGGTGGCGCACTGTGGTTAGGCCCGGGGAGCT
GGCAAAAAATAAAATTGCAATATTCATGTAAGCAAAAAAAAATCGATTGTCAGCGAGAATTCGTTTTCCCTGTTGCAATG
CACAGCAAATTTTCGAGATAAATGTGTCACCTGACTAGAATTGATAAATTGCAAGATATTTATTTCTTCTCTCTCGTTGC
AACGCCTAGACATGTTTGCTATATTACAAAAAATATGTTCAAAAATCAAGAGTTTCAACTAATTTTTATTCAAAACATTT
TCATGAATTAATCAATAATAAGTGATTGTTTTAAAATCAATTTACAGAGCTAGAGATATGAGATGGTTATTTTTTTTCTC
TTGTTGCAACGTACGGCCCTTTTTGCTAG---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TTAGAAGGCTAATAAGCCTAAATTTCTTTTTTTTTAT
TGACGGGAATAGGCCTAAATTTCTTCATGGTTGTTGCAGCGGGCTCCTTAAGGATATGTACA----------------AC
TTTACCGTTTTGTTTCCTACACATAGTAGAGTACCACGGAGTGAAATGCCTTGACTAGTTATGGTGAGCTTGACGAGTCA
TTGGTGTGGTGGCTTGCATGCACAAGTCTAGCCAAGGATCCAATTTAAATCCCACACAGTAGCGCTAGGATGCAGCAGTA
CGTACACCTCTAGCTCGTCCTTCCTTTAAGGCGTGGTGGGGC-GGGTCGGTTTCTATGATTCATGTGATGTCGTTGACAG
AAAGAGAAAGCAAGCATTGCATGTAGATCGACTGGAGCTACAGAAAGTGAAAGTAAATCATCAGCGTCAGAGAGCTATAG
AGTTAGACGATAGATAGCAAGTGAAAAGGAGCTCACTCCCCTTCATCATCTCCCTCCTATATATAC----------AGAG
AGAGAGAGTGAGAGATCATCAGACAGTGTGCTGCCAGAAGCCAGCTGCAGACACGAGTGAGAAAGACGATCAAGCTGTCA
AAAGG------------AGAAGAGGTCGAGAGGAGGGAAGGTGATCGGTCGATCATGGGGAGGCCGCCGTGCTGCCACAA
GGTGGGCGTGAAGAAGGGGCCGTGGACGCCGGAGGAGGACATCATCCTGGTGTCCTACATCCAGGAGAACGGCCCGGGGA
ACTGGCGGGCGGTGCCCATCAACACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
CCCGGCATCCGCCGCGGCAACTTCACCACGCACGAGGAAGGCATCATCGTCCACCTCCAGTCCCTCCTTGGCAACAGGTA
ACCAACTAAGCCACCCA---------------------------------------------------GCGATCGATCGT
CCGGGTTGGTCATGGCGGCCGCCCGTGCGTGCATGGTGATATACATGATCTAATAACAACTCTTTGGGTTT----GGGGG
AATGTAGATGGGCCGCGATCGCGTCCTACCTGCCACAGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTTAAGAAGCAGCAGGCCATGGGCGCCATCTTCGCGCCGCCGCCGCCGCCGCCCTCCAGCTCCGCCGAGAC
AGCTATCAACCTCCCCGGCGCCGTCCATCTCGACAACCACCACCACCGATACCACCATGACGCGATCGCTGCCTCCAGCT
CCACGGTCGACCACGGCTGCTACGCGGCGTGCAGCAACCCGGAGGTCACCCAGCAGCATACGACGATCACCATGCGCCGC
TCGCCATTCGCCGACGTCGCCGCCGACTGCTCCTCGTCGTCCTACGCCTCCAGCATGGACAACATATCCAGGCTCCTCGA
CGGTTTCATGAAGAGCTCCCCGCCCACCGCCACCGACGTCAAACCCAACATAGCCGTGGTCAGCGACCCTTTCATGTCCT
TCGACCGCATATCCGGCACCGGCACCGAGCTGGCTTTCGTCCCTGGCGTT---CAGCAGCAGCAGCAGCAGCCGGTGTTA
ATGGGGGGCATCAGCTATGATGACGAGGCCACCAGACAGCAGCAGCAGC---TCCATCATCAGTTGCCACTGTGTTCGAT
CGAGAAGTGGCTTCTCGATGAGGCAGCGGAGCAGGTCGCTGACCTGATGGACCTCTCCGACGGTGGCTGCTCCTCCCTGC
CATTGCTGTACTAGCCAG---TACTTCTGTGGTACTAGCTGGAAAAGGCAAACCAACGAACCATTGTCACTTTCCAGATA
CATAGTTAATCGTTTCTACAGTCAATTACATGCATACACATCCATATATATATAATAGAGAGGCTAAGTAATTTCTGTTA
ATTACATGTTCTAGCT-AGCTTCTTGGAGATCGCTATGATGACACCATCAAGTTAACTAGAGAGAGGCAA----------
------------AAGGAAGTTAATTATAGAGACGTTTACTAATGGTGCATAT-TACACTGGGATGGGATGATGAGAAGAA
GGCCAAGTGGCCAGAAGGAACAAGACAGTAACAGGAATTCAATAACGGCCGCGACGTGATGTATGATCTGATCTGCAAGC
ATGATGCGACTAAGGGTTGTCATGTCTGTTCTTGAATGTAGTTTTTTGTGGGGAAATGTTTTTTCGTTTCTGGGTTATAG
TG-CAAGCAAGCTGAAGTGTTCCAGCTTAGCTTACCCGGTGTTGAATTGTACGGAGTATGAATATAAGTTAGTGAACCCT
TCTGTTTTTGTCTTGATTCTAGTTGATTGATTCTGCAACGACTTGTACTTTTTCCTGATCATGTACGGTGTGACATGAAT
GCTACCCAAACTTGTTAGTGGAAAAAAAGCTAGAGAGAGGGGATATGTCCCTGTCGGCAACGGCAGATGG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TCCCTGATCACATTCACTGCAAAAGAAAAAAAAAGATGATCACATTCA
CTGCAAAAAAAAAAAAGAAAGCAACTCGCAGATTATAACAAAAAAATAATACTCCCTCCGTCCAACAATATAAGATGTTT
TTACAAGCTATGTTAGCTTGCAAAAAGGTCTTATATTAT-GGACGGAGGGGGTAATACATAGCCTTTTTAGCCCGGATTT
TTTGGGGAAAAGATGAACCATTTCTCAATGCATGGTTAGTTATTTAACTATCTGCTTCCAAAAGAAAA------------
-----------------------------------------------------------------------
>chr4D_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGACAA
GTTGGGCGTGAAGAAGGGTCCGTGGACGCCGGAGGAGGACATCATCCTGGTCTCCTACATCCAGGAGCACGGCCCCGGCA
ACTGGCGGTCTGTGCCGGTGAGCACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
CCCGGCATCAAGCGCGGCAACTTCACAAGCCACGAGGAAGGCGTCATCGTCCACCTCCAGTCACTCCTCGGCAACAGGTA
TACTTACCACTGATGAACTTCATATCATCG-ATCAATGGGGGGCTGGGGCAGTGGCCTGGCGTCCATGGCGATCGATTCA
GCTAAC---------------------------------------------AATTCCATCTC---TTGCTTT-------G
AATGTAGATGGGCGGCGATCGCGTCCTACCTGCCGCGGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTCAGGAAGCAGCAAGCCATGGGAGCCATCTTCGCGCCGCCGGCG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr4A_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGGGAGGCCGCCGTGCTGCGACAA
GTTGGGCGTGAAGAAGGGTCCGTGGACGCCGGAGGAGGACATCATCCTGGTCTCCTACATCCAGGAGCACGGCCCCGGCA
ACTGGCGGTCTGTGCCGGTGAGCACCGGCCTCATGCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGC
ACCGGCATCAAGCGCGGCAACTTCACAAGCCACGAGGAAGGCGTCATCGTCCACCTCCAGTCACTCCTCGGCAACAGGTA
TACCTACCACTGATCAACTTCATATCATCAAATCAATGGGTGGCTGGGGCAGTGGCCTGGCGTCCATGGCGATCGATTTA
GCTAAC---------------------------------------------AGTTCCATCTC---TTGCTTT-------G
AATGTAGATGGGCGGCGATCGCGTCGTACCTGCCGCGGAGGACGGACAACGACATCAAGAACTACTGGAACACGCACCTC
AAGAAGAAGCTCAGGAAGCAGCAAGCCATGGGAGCCACTTTCGCGCCGCCGGCG---TCCTCCTCCC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>SNPs
---------------------------------------------S---------------------------S------
-------SS-----------------------------------S-----------------------------------
---------S----S-S-----------S----------------------S------------------S--------S
---------------------------------------------------------------S---S------------
-----------------------------S------SS-------------------------------S----------
--------SSS-----------S----------------------------------S-S-SSSSSSS-SSSS-SSS-SS
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------SS--------------------------------------------
----------------------S------------------S------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-------------SSSSSSSSSS----
---------------------------------------------------------S----------------------
-----SSSSSSSSSSSS--------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------S--------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--S-------------S-----S----S--S--------SSS----------------------S----
-----------S---------------------S----------------------------------------------
--------------------------------------------------------------------------------
------------------SSS-----------------------------------------------------------
------------------------S---------------------------------------S---------------
----------------S---------------------------------------------------------------
-----------------------------------------------------SSSSSS---------------------
--------------------------------------------------------------S-----------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------------------------------S---------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S------------------S----
--------------------------------------------------------------------------------
---------------------------------S-----SS------S--------------------------------
--------------------------------------S-----------------------SS----------S-S---
----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_125
--------------------------------------------------------------------------------
-------------------------CTGCCTCAAGCCCTTACCAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2812
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------GAGCTATGATGACGAGGCCA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCGAGCTGCCA
AAAGGAGAA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_3254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ACACTGGGGATGGGATGATG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
