>input_sequence_60675
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-----------------------------------------------------------------ATGGCGGGAAACTCG
GTGAATCTGCCTCATGCAACTAGAAGAAGAAGTACTTTGGCTTTCAAGTTCCTGATACCCTTCGTTCTAGTTCTTTCAGT
TTCTGTTATTGCTGTCACCCAGTACTTCCAAAGTATCTCCTACTTTCTGCGGCCGCTGTGGGACACACCACCAAAGCCCT
TCTCCCGTATCCCGCACTACTATGCCCCTAACATGTCCATGGACCAGCTGTGTCAGCTCCATGGCTGGGGCATTCTCTCC
TTCCCTCGCCGTGTCTTTGATGCTGTTCTCTTCAGCAATGAGCTCGATATTCTGGAAATCCGCTACCATGAGCTCTTTCC
GTATGTTGACAGGTTTGTCATCCTTGAAGCGAATGCTACCTTCACTGGCATCCCAAAGTCACTCACCTTCTTTGAAAACC
TCAACCGTTTCGCATTTGCTAGCTCAAAGATTGTCTATGACATGCTTCCCATTGGAGATTTGGATCCTGATTCTCGCCGA
AT---------GCCCTTCCTTGTAGAAGCCGGTCACCGCCGTGCACTTAACAACCTGCTAAAAAGATCAGGCATTGCTGT
GGGGGATGTCTTGATCATGGCTGATGCCGATGAGATCCCCAGTCCTGAAACCGTGCAGTTGCTGAAGTGGTGTGATGGAA
TACCGCCAATCATGCATCTCGAGCTAAAAAACTATATGTACTCCTTTGAATTTCATGTGGATCAAAACAGCTGGAGAACG
ACAGCGCATGTGTTCACCGAGC---GGACCAAGTATCAACACTCCCGCCAGACCGACCTGATGCTGGCCGACGCGGGCTG
GCACTGCAGCTTCTGCTTCAGGGAGATCAAGGAGTTTGCTTTCAAGATGAAGGCATACAGCCATGCAGACCGGGTGAAAC
ATGACATCTTCCTGAACCCTGACAGGATCCAGAGAGTCATATGCAATGGGGATAACATTTTTGACATGCTACCTGAGGAG
TACACGTTTAGTGATCTCTTCAAGAAGATGGGGCGGATACCGAGGTCAGCGTCCGCTGTTCATCTTCCATCCTATTTGAT
CAGGAACGCGGACAGCTACAGGTTCTTACTTCCTGGTGGGTGCTTGAGACCGGGCTAA----------------------
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>chr5A_1_TraesCS5A01G046600
GGGATTCGGTCCGAGCCACCAATCGGGGCGGGGAGTCGC--TAGGTGGCGGCGTGTAGGGTAGGGTAAGGCGGCCTCTCT
TGTTTTTGCGGTCACTACGATGCTGTTTTCGTTCTATAATAGAAACAGCAA-TGGGGGAAAACCGATGGCATGGCATGGC
ATTGGCAGTGTG-A-----TCTAAGGTGCAGTTTCAGTCTGATTTGGGCGAGACTGCTGCTTGCTTCTGAATGATGGTAA
CAGGAGGTGGGGATGCGGA------TTGGTTGGACACCAAATTGGGCATACAGAT-------------------------
--G----------------------CATTTCAGTTTGATCTGGGCAACAGGGGCTTGCCATCTTACC--TGTGTTGCT-A
TCAGAATGGGTGTGAGTTTTCCGCATCGCGGTGACCCATCAGGCATATAGGAGGGATCACCAGACTGCAATGGGTCCTAG
CTGT--TGGAATCTCAAATAC---------------------------------GTACTTGTTTGTGTGGTTGATAGATT
GGGGTGGCTATGCTGTTGACAGTACACGAGCAGTTAGATCATGCTTGTTGGGGTTTACTGGCAAGAATGCCGTGACAACA
GATGATGCTAGCTCTGCTCTGGTGTTATGCTGCACTTTCATTTTCTTCCTTATTTGGTTGATGCAAATGCTGAAATGCAA
TAGCGGCTTGTTTATCTTGGCATATAAGCATCAATTTCATGGCTCCTTGTCTTGTCGTACATGTATATGAATGTGTGCAT
TTAAAGAACAAGTCAGTTGCATCACAAATTCACAAGAGTCTGTGTGTAGCTGTAACTCATCCCCATTCTACTTCGTAGAC
TGAGAATCTTACCTGTATGTTTATTTTGTCTAAGTTAT---GTTGCTTCCTGTACCACTTTCTTCTCCTTGTTTACTTAT
TTTCTGTTCCCTCTTGCATAATGCAGGTTGCATTCAGCTTCCGATATTGCCGTGTTCCCCAGGAAGAGAGAGTGCTTGGG
GCACTCTCATATGCTTCTCCGAGACTCGCTCATTTCTTTCCTTGCCAATGAAACAAGACAGTCGCATGGCGGGAAACTCG
GTGAATCTGCCTCATGCAACTAGAAGAAGAAGTACTTTGGCTTTCAAGTTCCTGATACCCTTCGTTCTAGTTCTTTCAGT
TTCTGTTATTGCTGTCACCCAGTACTTCCAAAGTATCTCCTACTTTCTGCGGCCGCTGTGGGACACACCACCAAAGCCCT
TCTCCCGTATCCCGCACTACTATGCCCCTAACATGTCCATGGACCAGCTGTGTCAGCTCCATGGCTGGGGCATTCTCTCC
TTCCCTCGCCGTGTCTTTGATGCTGTTCTCTTCAGCAATGAGCTCGATATTCTGGAAATCCGCTACCATGAGCTCTTTCC
GTATGTTGACAGGTTTGTCATCCTTGAAGCGAATGCTACCTTCACTGGCATCCCAAAGTCACTCACCTTCTTTGAAAACC
TCAACCGTTTCGCATTTGCTAGCTCAAAGATTGTCTATGACATGCTTCCCATTGGAGATTTGGATCCTGATTCTCGCCGA
AT---------GCCCTTCCTTGTAGAAGCCGGTCACCGCCGTGCACTTAACAACCTGCTAAAAAGATCAGGCATTGCTGT
GGGGGATGTCTTGATCATGGCTGATGCCGATGAGATCCCCAGTCCTGAAACCGTGCAGTTGCTGAAGTGGTGTGATGGAA
TACCGCCAATCATGCATCTCGAGCTAAAAAACTATATGTACTCCTTTGAATTTCATGTGGATCAAAACAGCTGGAGAACG
ACAGCGCATGTGTTCACCGAGC---GGACCAAGTATCAACACTCCCGCCAGACCGACCTGATGCTGGCCGACGCGGGCTG
GCACTGCAGCTTCTGCTTCAGGGAGATCAAGGAGTTTGCTTTCAAGATGAAGGCATACAGCCATGCAGACCGGGTGAAAC
ATGACATCTTCCTGAACCCTGACAGGATCCAGAGAGTCATATGCAATGGGGATAACATTTTTGACATGCTACCTGAGGAG
TACACGTTTAGTGATCTCTTCAAGAAGATGGGGCGGATACCGAGGTCAGCGTCCGCTGTTCATCTTCCATCCTATTTGAT
CAGGAACGCGGACAGCTACAGGTTCTTACTTCCTGGTGGGTGCTTGAGACCGGGCTAAATCAGAAGTGTCTTGTAACTTG
TTAGCCAACAGTATTACTTTTAGATGCAATGTTGTTGTTACTGTGGAAATAGGTGTGTTTTGTTTGATGTGGAGCAGTAA
TAGTTTTACTGTTTTAGATAGGATGGTAGAAACTTT------------GTGTGTGTGTTCAAGGAACCATGTGAACTTCA
GCTTAGAATTCACCTAAGGTGATACAAAGGTAAAATAGCGACAGGGATCGCCGCCCTTTTGGGTTCATCCTGATGAGCAG
GAAGCACATGAATGATGTAATTGTTT-TTGATCTAAATAAGGAGAGAATGATGCCCTTGTCTTCTCCTACTGGAATCAAT
GGAACAGGCTACAA-ATGCAGAAATACAAACATAGCTGCTGAC-------TATATCATCTGCATTGTTTGCATGCTAATC
TATGTTTAGTGTTACTTAAACATTTTTAAATAACAATCTCTAATGGACAAATGTTTATTTACAGTCTAAACTCACATGTT
TCCCTCTCAAAATGAGAACATTTAACTAAATAATTTACATTTAGTTGTAATCATATACAGTATA----------------
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-------------TAGTAAGTCCA-----------------TGGTGTACTATTTTTGTTTTCCTTAACCTAGAACATGAA
GAGCCTTTTTTACTCC-----CTTAAAG-----------TCACCCCCTCATCT--GTCTGAGGCTTGGAACTGTAAATGG
AAAATCGGGAGAAAATGTAGCGCTGATATATCCACGTGCTGATATATTTACTTGGAACTGTAAATGACAACATAATGCAG
GAACAAGCC-----AA-AAACTATACACGTGCTAGCCGCTTTGCATAATTATTATTCAGT------------------AA
TGTTCAGCAGAGAGTTTCATTTGATCTTCAGACCATCG------------------------------------------
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----------------------------------------------------------ACCC----ACACATGTTAGCTT
CTGGTACATACATGGGCCCTATGGAAATTTTGATCTGCTTGCAGCTTGTAAACACTTTCTTCAAGCTGCTCAAAAGTTGC
TGGCAAATCTAACTTTATTGATCATTTAAACCTCGAAAAGGAACATGTGTGCCAAAATATAAGAAAACCAT---------
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--------------------------------------------------------------------
>chr5B_1
GGGATTTGGTCCGAGCCACCAATCGGGGCGGGGAGTCGCCATAGGCGGCGGCGTGTAGTGTAGGGTAAGGCGGCCTCTCT
TGTTTTTGCGGTCACTACGATGCTGTTCT-GTTCTATGATAGAAACAGCAAATGGGGGAAAACCGATGGCATGGCATGGC
ATTGGCAGTGTGATCTCAGTCTCAGGTGCAGTTTCAGTCTGATTTGGGCGACTGC-CTGCTTGCTTCTGAATAATGGTAA
CAGCGGGTGGGAATGCGGATTGGTTTTGGTTGGACACCAAATTGGGCATACAGAT-------------------------
--GATCCTCGTGTGCAGGGGTGTGGCATTTCAGTTTGATCTGGGTAACAGGGGCTTGCCATCTTACT--TGTGCTGCTAA
TAGAAATACTTGTGAGTTTTGCACATCATGGTCACGCAACCGGGCATAGGGATCATTTGCTTGTGAGAGAGTGGCCATAG
CTGT--CGGAATCTTGACTAC-------------------------------------TTTTTATATT-GTTGATACATA
GGGGTGCCTATGCTGTTGACAGTACACTAGCAGTTAGATCATGCTTCTTGGGGTTTTCTGGCAAGAATGCTGTGGCACTA
GATGATGCTGGCTCTGCTCTGGTATTATGCTGCACTTTCATTTTCTTCCTTATTTGGTTGATGCAAATCAGCGAATGCAA
TAGCAGCTCGTTTATCTTGGCGTGTAC-TATCAATTTCACGGCTCCATGTCTTGCCCTATATGTATATGAATGTGTACAT
TTAAAGAACAAGTCAGTTGCGCCACAAATTTACAGAAGGCCGTGTGTAGCTGTAACTCATCCCCATTCTACTTTGTAGAC
TGAGAATCTTACCTGTATGTTTATTTTGCCGAGG---TTATGTCGCTTCCTGTACCA----CTTCTCCTTGTTTACTTAT
TTTCTGTTCCCTCTTGCATAATGCAGGTTGCATTCAGCTTCTGATATTGCCGTGTTCCCCAGGAAGAGAGGGTACTTGGG
GCACTCTCATATGCTTCTCCAAGACTCGCTCATTTCTTTCCTTGTCAATGAAACAAGACAGTCGCATGGCGGGAAACTCG
GTGAATCTGCCTCATGTAACTAGAAGAAGAAGTACTCTGGCTTTCAAGTTCCTGATACCCTTCGTTCTAGTTCTTTCAGT
TTCTGTTATTGCTGTCACCCAGTACTTCCAAAGTATCTCCTACTTTCTGCGGCCGCTGTGGGACACACCACCAAAGCCCT
TCACCCGTATCCCGCACTACTATGCCCCTAATATGTCCATGCACCAGCTGTGTCAGCTCCATGGATGGGGCATCCTCTCC
TCTCCTCGCCGTGTCTTTGATGCTGTTCTCTTCAGCAATGAGCTCGATGTTCTGGAAATCCGCTACCATGAGCTCTTTCC
ATATGTTGACAGGTTTGTCATCCTTGAGGCGAATGCTACCTTCACTGGCATCCCAAAGTCACTCACCTTCTTTGAAAACC
TCAACCGTTTCGCATTTGCTAGCTCAAAGATTGTCTATGACATGCTTCCCATTGGAGAGTTGGATCCTGATTCTCGCCGA
AT---------GCCCTTCCTTGTAGAAGCCGGTCACCGCCGTGCACTAAACAACCTGCTAAAAAGATCAGGCATTGCTGT
GGGGGATGTCTTGATCATGGCTGATGCCGATGAGATCCCCAGCCCTGAAACCGTGCAGTTGCTGAAGTGGTGTGATGGAA
TACCACCAATCATGCATCTCGAGCTAAAAAACTACATGTACTCCTTTGAATTTCATGTGGATCAAAACAGCTGGAGAACG
ACAGCGCATGTGTTCACCGAGC---GGACCAAGTATCAGCACTCCCGCCAGACCGACCTGATGCTGGCCGACGCGGGCTG
GCACTGCAGCTTCTGCTTCAGGGAGATCAAGGAGTTTGCTTTCAAGATGAAGGCATACAGCCATGCAGACCGGGTGAAAC
ATGACATCTTCCTGAACCCGGACAGGATCCAGAGAGTCATATGCAATGGGGATAACATTTTTGACATGCTACCTGAGGAG
TACACGTTTAGTGATCTCTTCAAGAAGATGGGGCCGATACCGAGGTCAGCGTCCGCTGTTCATCTTCCATCCTATTTGAT
CAGGAATGCGGACAGCTACAGGTTCTTACTTCCTGGTGGGTGCTTGAGACCGGGCTAAATCAGAAGTATCTTGTAACTTG
TTAGCCAACAGTATTACTTTTAGATGCAATGTTGTTGTTACTGTGGAAATAGGTGTGTTTTGTTTGATGTGGAGCAGTAA
TAGTTTTA--------GATAGGATTGTAGAAACTTTCTGTCTGTGTGTGTGTGTGT--TCAAGGAACCATGTGAACTTCA
GCTTAGAATTCACCTAAGGTGATACAAAGGTAAAATAGCGACAGGGATCGCCGCCCTTTTGGGTTCATCCTGATGAGCAG
GAAGCACATCAATGATGTAATTTGTTCTTGATCTAAATAAGGAGAGAATGATGCCATTGTCTTCTC-TACTGGAATCAAT
GGTACAGGCTACAAAATGCAGAGATACAGAGTTAGCTGCTCTTATTCGATTATATCCTCTGCATTGTTTGCATGCTAATC
TATGTCTAGTGTTACCTGAACATTTTTAAATGACAATCTCTAATGGACAAGGGTTTATTTACAGTTTAAACCCATTGGTT
TCCCTCTCAAAATAAGAACATCTAACTAAATAATTTACATTTAGTTGTAATCATA-----TATATTAATGGACAAATGTT
TATTTACAGTCCATAAACCCATAGTTTTCCCTCTAAAAAAATAGAACATCTAGCTAAATGAAACTTGTTTCAATTCGGTT
GTAATCATACAGTTAGTAAGACCA-----------------TGGCCTACTCTTTTTTTTTTACTTTATCCAGGAAAGGAA
AAGCCTATTTTACCCC-----AGTATTGGCATTGGCACTTCACCCCCTAATCTTTGTCTGAGGCTTTGAACAGTAAATGG
AGAATCAGGAGAAAATGTAGCGATGAGCTG-----------------------------------GACAACTGAATACAC
AGGAAAAATAAAAACGCAAACTATACACACTCTCGTTGAATACGCAGGAGTAATAATTATTGAATAATAAATAAATCAAG
TGTTCAGAACAGAGTTTCATTTCG-TTTCAGATCATCCATGACTACAAGATGAGATCAGTGATGCTCATATATTCCTCAA
GGTG----------------------------------------------------------------------------
---------------------TCAAGCTTGTACTTTCGTACTACTTCCTGATGATCATATCATACAACTCATGTGAGCTT
CTGGTATATACATGTCTCTTTAAGCTGGC---------------------------------------CCCAAAAGGTCC
TGGCAAATCTAACTTTATTGATCATTTAACCCTAGGAAAGGAACATGTGTGCCAAGATATAAGATAGCCATTCAGTTCAG
TTTATTTTCCCTTTCAGATATTTCTGTCATCTACTCTTTCCCTCTATAGGATCTGACACAATGTTACTATATCTTCGATA
ACATTCTGTTTCTTCATTTCCATATTCTTTTATAAACTTCGCCTTATCACCGGCAGTTTAGTGGTAGATGTGACTTCACG
ACGCTGTTGTTAGCATGGAAACATATTGCATTGTGCAAAAGTTGATGCAAAACCAGGACTTCATTTATCTGATGTGCATT
GTGCAACAACTTCAATTGGTTAAAAGCTTTAAGATGTCTGCATTTCTATCCATGTAATGTACTATCCACATATTGAATGA
TGCATATCTAACATCAAGTCTCAATAGTGCTTTGAAGGTGCAGCACATCTTTGCATCTTCTAGATATAATTGCATCATAC
TCACTTTCTTCTACATAGTTTTTCTTTTCTTTTAATACGGTCTGCTCATCCATGGCTATAAGAAGAGAAGCCCCTAACCT
ATTTGGATCTGCACCGTCTCTCCTCTCCGCCAGCTTCATACATGGAGGCTCTCAAGGTCAAGATGCCAGACTTGTGCTTG
CTCTTGCTCATGGCACTCCTGTTGCTTCCTGGTAAGCCTTGCCTGGAATAATTATCCGAAGAATATACAACACTTTCTCA
GTAGTCTATTCTTTTTCTGATGCTGCTGTGCAAAATGATGTTCTTATTTTTACTGAAGGGTCTGAAGGTAATACCTGCAC
GACGATCAGCCGGACCTACATTACTTTCTTATGTGTGCGTGACACATGCGTCAAGCACTGCCACGGCGAGGGCTACACAG
CAGGGAAGTGTGTGATCACCTCCTTAGAACCTCCCATGTTAGTCTGCTTCTGCATGAAACCCTGCTGATGATGCTTCTGA
AGCAGTGTTTTTAAGGAACTATATTTGTGAACTTCTATGTCGTATTTGCTATGATGAGAAGATCGACATAGAGTTCACCT
AAGAAGATGTAATAAAGGTAATGTTGCGATGGAGTTCTCGGCCCTTTTGGGTTCATCCTGATGAGCAG
>chr1A_36
-----------------------------------TCCC--TAGGTGGCAGCGTGTAGTATAGGGTAAGGTGGTCTCTCT
TGTTTTTTGCGGCACTACGATGTTGTTCT-GTTCTATAATAGAAACAGCAACA--GGGGAAACCGATGGCATGGCATGGC
ATTGGCAGTGTGAA-----TCTAAGGTGCAGTTTCAGTCTGATTTTGGGT-GACTGCTTCTTCCTTCTGAATGATGGTAA
CAGGGGGTCGGGATGCAGA------TTGGTTGGACACCAAATTAGGCATACAGAT-------------------------
--G----------------------CATTTCAGTTTGATCTGGGCAACAGGGGCTTGCCATCTTACC--TGTGCTGCTAA
TGAAAATGGTTGTGAGTTTTTTGCATCGCGGTGACCCATCAGGCATATAGGAGGGATCACCAGACTGCAAGGGGTCCTAG
TTGC--TGGAATCTTAAATAC-------------------------------------TTGTTTGTGTGGTTGATAGATA
GGGGTGGCTATGCTGTTGACAATACATGAGCAGTTAGATCATGGTTGTTGGGGTTTACTGGAAAGAATGTTGTGACAATA
GATGATCCTGGCTCTGCCCTG-----------------------------------------------------------
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>chr5D_212
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------------------------------------------------------------TTGCTTCTGAATGATGGTAA
CATGGGGTGGGGATGCAGA------TTGGTTGGACACCAAATTGGGCATACAGATGAGATGATCCTCATGGGCAGGGGTG
TGG----------------------CATTTCAGTTTGATCTGGGCAACAGGGGCTTGCCATCTTACTTGTGTGCTGCTAA
TAGAAATAGTTGTGAGTTTTCCGCATCGCGGTCACCCATCAGGTATATAGGAGGGAGCACCAGACTGCAAGGGGTCCTAG
TTGTTTTGGAATCTTAAATACTCCAAAAACGTCCTATATTATGGGACGGAGGGAGTACTTGTTTGTGTGGTTGATAGACA
GGGGTAGCTATGCTGTTGAAAATACACGAGCACTTAGATCATGCTTGTTGGGGTTTTCTGGCAAGAATGCTGTGACAATA
GATGATGCTGGTTCTGCTCTGGTGTTATGCTGCACTTTCATTTTCTTCCTTATTTGGTTGATGCAAATGCTGAAATGCAA
TAGCGGCTCGTTTATCTTGGCATATAAGTATCAATTTCACGGCTCCATGTCTTGTCGTACATGTATATGAATGTGTGCAT
TTAAAGAACAAGTCAGTTGGGTCACAAATTCACAAGAGTCTGTGTGTAGCTGTAACTCATCCCCATTCTACTTCGTAGAC
TGACAATCTTACCTGTATGTTTATTTTGTCTAAGTTATTATGTTGCTTCCTGTACCACTTTCTTCTCCTTGTTTACTTAT
TTTCTGTTC--TCTTGCATAATGCAGGTTGCATTCAGCTTCCGATATTGCCGTGTTCCCCAGGAAGAGAGAGTACTTGGG
GCACTCTCCTATGCTTCTCCGAGACTTGCTCATTTCTTTCCTTGCCAATGAAACAAGACAGTCGCATGGCGGGAAACTCG
GTGAATCTGCCTCATGCAACTAGAAGAAGAAGTACTTTGGCTTTCAAGTTCCTGATACCCTTCGTTCTAGTTCTTTCAGT
TTCTGTTATTGCTGTCACCCAGTACTTCCAAAGTATCTCCTACTTTCTGCGGCCGCTGTGGGACACACCACCAAAGCCCT
TCACCCGTATCCCGCACTACTATGCCCCTAATATGTCCATGCACCAGCTGTGTCAGCTCCATGGCTGGGGCATCCTCTCC
TCCCCTCGCCGTGTCTTTGATGCTGTTCTCTTCAGCAATGAGCTCGATGTTCTGGAAATCCGCTACCATGAGCTCTTTCC
ATATGTTGACAGGTTTGTCATCCTTGAGGCGAATGCTACCTTCACTGGCATCCCAAAGTCACTCACCTTCTTTGAAAACC
TCAACCGTTTCGCATTTGCTAGCTCAAAGATTGTCTATGACATGCTTCCCATTGGAGAGTTGGATCCTGATTCTCGCCGA
AT---------GCCCTTCCTTGTAGAAGCTGGTCACCGCCGTGCACTTAACAACCTGCTAAAAAGATCAGGCATTGCTGT
GGGGGATGTCTTGATCATGGCTGATGCCGATGAGATCCCCAGTCCTGAAACCGTGCAGTTGCTGAAGTGGTGTGATGGAA
TACCGCCAATCATGCATCTCGAGCTAAAAAACTATATGTACTCCTTTGAATATCATGTGGATCAAAACAGCTGGAGAACG
ACAGCGCATGTGTTCACCGAGC---GGACCAAGTATCAACACTCCCGCCAGACCGACCTGATGCTGGCCGACGCGGGCTG
GCACTGCAGCTTCTGCTTCAGGGAGATCAAGGAGTTTGCTTTCAAGATGAAGGCATACAGCCATGCAGACCGGGTGAAAC
ATGACATTTTCCTGAACCCGGACAGGATCCAGAGAGTCATATGCAATGGGGATAACATTTTTGACATGCTGCCTGAGGAG
TACACGTTTAGTGATCTCTTCAAGAAGATGGGGCCTATACCGAGGTCAGCGTCCGCTGTTCATCTTCCATCCTATTTGAT
CAGGAACGCGGACAGCTACAGGTTCTTACTTCCTGGTGGGTGCTTGAGACCGGGCTAAATCAGAAGTGTCTTGTAACTTG
TTAGCCAACAGTATTACTTTTAGATGCAATGTTGTTGTTACTGTGGAAATAGGTGTC-TTTGTTTGATGTGGAGCAGTAA
TAGTTTTA--------GATAGGATGGTAGAAACTTTCTGTCTGTGTGTGTGTGTGTGTTCAAGGAACCATGTGAACTTCA
GCTTAGAATTCACCTAAGGTGATACAAAGGTAAAATAGCGACAGGGATCGCCGCCCTTTTGGGTTCATCCTGATGAGCAG
GAAGCACATCAATGATGTAATTTGTTCTTGATCTAAATAAGGAGAGAATGATGCCATTGTCTTCTC-TACTGGAATCAAT
GGAACAGGCTACAAAATGCAGAGATACAGAGTTAGCTGCTCTTTTTCGATTATATACTCTGCATCGTTTGCATGCTAATC
TATGCCTAGTGTTACTTGAACTTTTTTAAATAACATTCCCTCATGGACAAATGTTTACTTACAGTCTAAACCCATAGGTT
TCCCTCTCAAAATAAGAACATCTAACTAAATAATTTACATTTAGTTGTAATCAGA-----TATA----------------
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-------------TAGGAAGTCTTTTTTTTTCCCCTGCCATTGGTGTACTATTTATGTTTTCCTTAACCTAGAACACGAA
AAGCCTATTTTACTCCCTTAAAGTATTGGCATGAGCACTTCACCCCGTCATCTCC----GAGGCTTGGAACTGTAAATGG
AAAATCAGGAGAAAATGTAGCGATGAGCTG-----------------------------------GACAACATAATACAG
GAACAAACATAACAAA-AAACTATACACGTGCTAACCGCTTTGCATAATTATTATTCAGT------------------AA
TTTTCGGCAGAGAGTTTCATTTGATTTTCAGATCATCAATGTCATCAAGCTGGAAACAGCCTCTTACAGAAATGTAGGGA
AAGGCTGCGTACTATAGACCCAAAGTGGTCGGACCCTTCCCTGGACCCTGCGCAAGCGGGAGCTACATGCACCAGGTTGC
CCTTTTTTATCATCAATGTCATCAAGCTTGTG-----------CTTCCTGATGATCATACCC----ACCCATGTTAGCTT
CTGGTATATAACATGGCTCTATGTAAAATTTGATCTGTTTGCAGCTTGTCAACACTTTCTTCAAGCTGCCCAAAAGTTGC
TGGGAAATAAAACTTTATTGATCATTTAAACCTCGAAAAGGAACATGTGTAATAAAATATAAGAAAATCAT---------
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>chrUn_1112
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----------------ACCCAGTACCACCGGAGCATCACCTACTTCCTGCGGCCGCTGTGGGACACGCCGCCCAAGCCCT
TCACCGTCATCCCGCACTACTACGCCCCCAACACCTCCATGGCCGAGCTGTGCGCGCTCCACGGCTGGCGCGCCCGCGCC
TCCCCTCGCCGCGTCTTCGACGCCGTCCTCTTCAACAACGAGCTGGACATCCTGGAGATCCGGTACCGCGAGCTGCTCCC
CTACGTCCACAAGCTGGTCATCCTGGAGGCCAACGCCACCTTCACCGGCATCCCCAAGCCGCTCTCCTTCGCCGAGAACC
TGGAGCGCTTCGCGTTCGCGAGGTCCAAGATCGTCTACGACAGGCTCCCCATCGCCACACCGGGGTCATCGCCAGGTCGC
CGCCGGGAAGAGCCGTTCGACCTGGAAGCCAGGCACCGGCGCGCGCTGAACGCGCTGCTGCGGCGGTCGGGCGTCGCGGG
CGGGGACGTGGTGATCATGGCGGACGCGGACGAGATCCCGAGCCCGGAGACGGTGCAGCTGCTGCGGTGGTGCGACGGGG
TGCCGCCGGTGATGCACCTGCAGCTGGAGAACTACGTCTACTCCTTCGAGTTCCCCGTGGACCGCGGCAGCTGGAGGGCG
ACGGCGCACCTCTTCAGCGAGCGGCGCACGGCGTACCAGCACTCCCGGCAGAGCGACCTGATGCTAGCGGACGCCGGGTG
GCACTGCAGCTTCTGCTTCAGGGAGATCGCCGAGTTTGCGTTCAAGATGAAGGCGTACAGCCACGCGGACCGGGTGAGGC
GGCAGAGCTTCCTCGACCCGGAGAGGATCCAGCGGGTCGTATGTGCCGCCGACGACCTGTTCGACATGCTCCCCGAGGAG
TACACCTTCAGGGATCTCTTCACGAAGATGGGGCCAATACCCAGGTCGGCGTCGGCCATGCACCTGCCTTCCTATTTGAT
CAAGAACGCACACAGATTCAGGTTCTTGCTTCCTGGTGGATGCTTGAGATCAGGTTAAA---------------------
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>chrUn_1130
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----------------------------------ATCACCTACTTCCTGCGCCCACTGTGGGACACGCCGCCCAAGCCAT
TCACCGTCATCCCGCACTACTACGCCCCCAACACCTCCATGGCGGAGCTGTGCGCGCTCCACGGCTGGCGCGCCCGCGCC
TCCCCTCGCCGCGTCTTCGACGCCGTCCTCTTCAACAACGAGCTCGACATCCTGGAGATCCGCTACCGCGAGCTGCTCCC
CTACGTCCACAAGCTGGTCATCCTGGAGGCCAACGCCACCTTCACCGGCATCCCCAAGCCGCTCTCCTTCGCCGAGAACC
TGGAGCGCTTCGCGTTTGCGAGGTCCAAGATCGTCTACGACAGGCTCCCCATCGCCACACCGGGGTCACCAG------GT
CGGCGGGAAGAGCCGTTCGACGTGGAGGCCGGGCACCGGCGCGCGCTGAACGCGCTGCTGCGGCGGTCGGGCGTCGCGGG
CGGGGACGTGGTGATCATGGCGGACGCGGACGAGATCCCGAGCCCGGAGACGGTGCAGCTGCTGCGGTGGTGCGAGGGGG
TGCCGCCGGTGATGCACCTGCAGCTGGAGAACTACGTCTACTCCTTCGAGTTCCCCGTGGACCGCGGCAGCTGGAGGGCG
ACGGCGCACGTCTTCAGCGAGC---GCACGGCGTACCAGCACTCCCGGCAGAGCGACCTAATGCTGGCGGACGCCGGGTG
GCACTGCAGCTTCTGCTTCAGGGAGATCGCGGAGTTCGCGTTCAAGATGAAGGCGTACAGCCACGCGGACCGGGTGAGGC
GGCAGAGCTTCCTGGACCCGGCGAGGATCCAGCGGGTCGTCTGCGCCGGCGACGACCTGTTCGACATGCTCCCGGAGGAG
TACACCTTCAGGGATCTCTTGAAGAAGATGGGGCCAATACCCAGGTCGGCGTCGGCCATGCATCTGCCTTCCTATTTGAT
CAAGAACGCACACAGGTTCAGCTTCTTGCTTCCTGGTGGATGCTTGAGATCAGGTTAAAACA------------------
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>chr6A_1130
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----------------------------------ATCACCTACTTCCTCCGGCCGCTGTGGGACACGCCGCCCAAGCCCT
TCACCGTCATCCCGCACTACTACGCCCCCAACACATCCATGGCCGAGCTGTGCGCGCTCCACGGCTGGCGCGCCCGCGCC
TCCCCTCGCCGGGTCTTCGACGCCGTCCTCTTCAACAACGAGCTGGACATCCTGGAGATCCGCTACCGCGAGCTGCTCCC
CTACGTCCACAAGCTGGTCATCCTGGAGGCCAACGCCACCTTCACCGGCATCGCCAAGCCGCTCTCCTTCGCCGAGAACC
TGGAGCGCTTTGCGTTCGCGAGGTCCAAGATCGTCTACGACAGGCTCCCCATCGCCACACCGAGACCGGGGTC---TCGT
CGCCGGGAAGAGCCATTCGACGTGGAGGCCCGGCACCGGCGCGCGCTGAACGCGCCGCTGCGGCGGTCGGGCGTCGCGGG
CGGGGACGTGGTGATCATGGCGGACGCGGACGAGATCCCGAGCCCGGAGACGGTGCAGCTGCTGCGGTGGTGCGACGGGG
TGCCGGCGGTGATGCACCTGCAGCTGGAGAACTACGTCTACTCCTTCGAGTTCCCCGTGGACCAGGGAAGCTGGAGGGCG
ACGGCGCACATCTTCAGCGAGC---GCACGGCGTACCAGCACTC-------------------CTGGCCGACGCCGGGTG
GCACTGCAGCTTCTGCTTCAGGGAGATCGCCGAGTTCGCGTTCAAGATGAGAGCGTACAGCCACGCGGACCGGGTGCGGC
GGCAGAGCTTCCTCGACCCGGCGAGGATCCAGCGGGTCGTCTGCGCCGGCGCCGAGCTGTTCGACATGCTCCCCGAGGAG
TACACCTTCAGGGATCTCTTCAAGAAGATGGGGCCAATACCCAGGTCGGCGTCGGCCATGCACCTGCCTTCCTATTTGAT
CAAGAACGCACGCAGGTTCAGCTTCTTGCTTCCTGGTGGATGCTTGAGATCAGGTTAAAACA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>SNPs
------S---------------------------------------------------S---------------------
---------------------------S-S--------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-S-S-----S------------------------------------------------------------S---------
--------------S----------------------------------------------------------------S
----------------------------------------------------------------------S-------S-
---------S----------------------------------------------------------------------
--------S-------------------S----------S------S---------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----------------------------------------------------------------------S------
-S------------------------------------------------------------------------------
S--------------------------S----------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SSSSSSSS----------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------SS-------------------------------S----------S-------------
----------------------S-----S-SS--------SSS-------------S-----------------------
-----S-----------S-----------------------------------------------------S--S-S---
-------------S-------S---------------------------------SSSSS--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
S-----S--------------SS--SS-----------------------------------------------------
------S---------------S---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---
------S-S-----------------------------------------------------------------------
-------------------------S------S----S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------S--------------------S---------S-----------S-------------------S----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>forward_729
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCTGAAATGCAA
TAGCGGCTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>reverse_2115
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------GGATACCGAGGTCAGCGTC---------------------------
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--------------------------------------------------------------------
>forward_1283
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CACACCACCAAAGCCCT
TCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
>reverse_2987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------AGTCACCCCCTCATCTGTCT----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------
