>input_sequence_60670
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----------------------------------------------ATGGCGGCCGATGGCGCTCAACAACCGCTGCTAC
CCGGCGGCGGCGGCGGCGGCGAGCCAGCTGATGCCATCCGACGGAAGCCGCCGGACGGGGTGAAGAGGTTTCGGCGCTGC
CGTACGGCGCCTTCCTCCGACCCTGCTGCTGCGTCGGAAGAGCTTCATCCTCCTACTCCCCCCGGCAACGCCAGTCAGAC
CGCTTCGCT------------CAAGAAAGTGCTCGAGAGCGGCCGCCCGAGCCCGAGCTTCCGCCTGGTGGGCCTGCTCC
TCCTGGCCTACGTTGTCGCCGGCACCACCGTCTTCTACCTCTTCATGGACCACATGTCCGGGCACCGCAGCGGCAGCCGC
GTTATCGACGCGCTCTACTTCTGCGTGGTGACCATGACCACCGTCGGCTACGGCGACCTCGTCCCGTCCAGCGACACCAG
CAAGCTGCTGGCCAGCGCGTTCGCCTTCGGCGGCGTCGCCGTGGTGGGCACCTCGCTCAGCAAGTCCGCCGACTACCTGG
TCGAGAAGCAGGAGTCGCTCGTCTTCCGCGCGGTCCACGCCGCCAACTTTGGCAAGCACCCGGCGCGGGAGCTGCGCGCC
ATGGAGATGAACAGGACGTGGTACAAGCTGTACGCGGCCGGGGCGCTGCTGGCGGCGTCGGTGGCGTCGGGGACGGTGGT
GCTGTGGAAGGGGGAGGGGATGCGGCCCGTGGACGCCCTGTACTGCGTGTGCGCGACGGTGACCACTCTCGGGTACGGCG
ACCGGAGCTTCATGTCGTCGGCCGGGCGCGCGTTCGCGGCGGTGTGGGTCACCGTGAGCACGGTGGTGGTGGCGCTCTTC
TTCCTGTACGTGGCGGAGCTGTACGCGGAGCGGCGGCAGAGGGCGCTGGCGCGTTGGGTGCTGACGCGGCGGACGACCAA
CACTGACCTCGAGGCGGCCGACCTGGACGGCGACCGGCGCGTCGGGGCGGCGGAGTTCGTGCTGTACAAGCTCAAGGAGC
TCGGGAAGATCAGCCAGGAGGAGATCGCCGAGTTCATGGAGGAGTTCGACGAGCTCGACGCCGACCACAACGGCACGCTG
TCGCCCTCTGACCTCGCCGTCGCGCAG---GCCACTGCTTGA--------------------------------------
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>chr4B_1_TraesCS4B01G014500
AGATACGGATCTTCAGTGGCAGGCGGATGGACCATACCATCGATAGGGGGAGGGGGGCGGCGGATGGGGCGATGGCTTTG
TACAACGACTTGGTGGAGAATTGACCCGAAGGCTCAAGGCGCCATCGCACCAGATCAGGGCCGCCATCCACCAATGGTAC
TTCTATTGAAACAAAGTTTGTGGGTTCTATCCGAATTTTTCTAAACAATGTTTATTTTCACTTGTAATAACATGAAGTTG
CTCCGCCTTATTCTTCTAGCCAAGCCTACTCTGTTTTTTCTTGATGTTTATTGGCTATCTGGGTGATAAATTTGCAACTG
GAAGTAGCAAAAATGTTGAAAGCCTTAGATGATAGAAAATGTGTACACCTGAAAATACACACCATTTTTCACCACTTACT
TGGACGTCTTCGACAATGAGCTCTCTGTGGGCTCCCGAAAAACCAATAATACATGCTAAGGAAATGGTCCAACTAATCAA
GCGCTGGTGGCCTGCTGCGCGATGGCGAGGTCAAAGGGAGACATCGTGCCGTTGTGGTCAGCGTCGAGCATGTCGAACTC
CTCCATGAACTCCGAGATCTCCTCCAGCCTGATCTTCCTGAGCTCCTTGAGCTTGTACAACACGAACTCCGCCGACCCGA
CACGCCGGTCGCCGTAACAGTCAAGCATGGAACTCATTAAGCAGACCAAGCAAATTAATAATGGTTCAGAACCTTAATAT
TTACATTGCAATGAAATTTATGTTTGAAACTTTTGACAATTGGAAATGTTTTATTGTCTTTGTCCTTGTTGATATGTCAG
ATTGGAGAATTGTTGTCTGATTTTTTCCAGGTGGAGAGAGGGGCAGTAATATGTAACTCAAGGGCAGCCACGCGGTACGG
CGATACACTCCACACGTGGAGCAGAGGAAGAGTCACCGAGAACAAGAAGTGGCTCGCATTTCTCCTCTCTGATCTGCACA
TATCTGCATCGCTAGCTCCTGCTACTCC------CATCGGCCAAAAATGGCGGCCGATGGCGCTCAACAACCGCTGCTAC
CCGGCGGCGGCGGCGGCGGCGAGCCAGCTGATGCCATCCGACGGAAGCCGCCGGACGGGGTGAAGAGGTTTCGGCGCTGC
CGTACGGCGCCTTCCTCCGACCCTGCTGCTGCGTCGGAAGAGCTTCATCCTCCTACTCCCCCCGGCAACGCCAGTCAGAC
CGCTTCGCT------------CAAGAAAGTGCTCGAGAGCGGCCGCCCGAGCCCGAGCTTCCGCCTGGTGGGCCTGCTCC
TCCTGGCCTACGTTGTCGCCGGCACCACCGTCTTCTACCTCTTCATGGACCACATGTCCGGGCACCGCAGCGGCAGCCGC
GTTATCGACGCGCTCTACTTCTGCGTGGTGACCATGACCACCGTCGGCTACGGCGACCTCGTCCCGTCCAGCGACACCAG
CAAGCTGCTGGCCAGCGCGTTCGCCTTCGGCGGCGTCGCCGTGGTGGGCACCTCGCTCAGCAAGTCCGCCGACTACCTGG
TCGAGAAGCAGGAGTCGCTCGTCTTCCGCGCGGTCCACGCCGCCAACTTTGGCAAGCACCCGGCGCGGGAGCTGCGCGCC
ATGGAGATGAACAGGACGTGGTACAAGCTGTACGCGGCCGGGGCGCTGCTGGCGGCGTCGGTGGCGTCGGGGACGGTGGT
GCTGTGGAAGGGGGAGGGGATGCGGCCCGTGGACGCCCTGTACTGCGTGTGCGCGACGGTGACCACTCTCGGGTACGGCG
ACCGGAGCTTCATGTCGTCGGCCGGGCGCGCGTTCGCGGCGGTGTGGGTCACCGTGAGCACGGTGGTGGTGGCGCTCTTC
TTCCTGTACGTGGCGGAGCTGTACGCGGAGCGGCGGCAGAGGGCGCTGGCGCGTTGGGTGCTGACGCGGCGGACGACCAA
CACTGACCTCGAGGCGGCCGACCTGGACGGCGACCGGCGCGTCGGGGCGGCGGAGTTCGTGCTGTACAAGCTCAAGGAGC
TCGGGAAGATCAGCCAGGAGGAGATCGCCGAGTTCATGGAGGAGTTCGACGAGCTCGACGCCGACCACAACGGCACGCTG
TCGCCCTCTGACCTCGCCGTCGCGCAG---GCCACTGCTTGATTAGTTGGACCATTTCCTTGGCACTTATTTTTGATTTT
TTGGGAGCCGACAGAGAGCTCACTGTCGAAGACGTCC------------AAACTGGTGTGTATTTTCAGTTGTATAAACG
TGCGGAGTCCAAAATGGAACGCGGGGAACCGGGGAAGTATGCTGGCGCCCGGGCGGCAGAGTGCGGTACTGCAGTGGTAT
TTTTTTTTTCCTTTCATCTTATTCTAGTTCTTTCATTTTCAATTACCTTTCTATTTGCTTTCTATTTAATTTTATATCAT
TTAGCAGTAGCGAGTTTAGAAGAAAACGCGCTGCTACAAAGGAAGTAGCGGTAGCGCGGTTCAATATGAATCGCTTCTAC
TATGTGTAGCCTACCGGCTAAGCCGTGGGAATTATAGTGGTATCGCTTGTTTGTGAACATGCGCTACTGCTAATGTTTGA
GCTATAGCCCGCTTTGCATGAACGCGCTACTACAAATTAGCAGTGGCGCTCTATTTTAACCAGCGCTACTGCTATACCTC
TGTGTATAGGCTTTTTCCTAGTAGTGTCAACTTGTCATGGATGGCTGCTAGTTCTATATATCATTCCCCCTAACGTACAA
ACTGAGCTCTTGGTATCTTGCTTGAGATGCCCATTCCCTTTGCAAACGCCCAAATGCTCAATCTATTAAGGCCAAACTCG
GATGGTTCTCTTTATGGACAAAGCCAAACTTATCTGCTTATTCAGTCCTCTACAATTGGTTAAGCCATCAGATAACTTTC
TCCATAAAGAAAGATATTGACCTGAAAATGATGTGTGGACTAATTCATCAGTGCAGTAACTCCGGCCCCTGATTAGGCTC
AGCAGGAAGAGTAAAAACCATTACTACTTACTAGCAAACAGAATGCTAGACAATGTGCTGCTATGCCAGTAGGATAAGTG
ATGTTTCTAAACGGTGACAAGCATAGAACATTGTACTTACCTTGCAAAAATTAAGACCAGAGAAAAGATGGCAAGATAAA
CATGACTTCTTCCT
>chr4D_875
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--------------------------------------------------------------------------GTACGG
CGATACACTCCACACGTGGACCATAGAAAGAGTCATCGAGAACAAGAAGAGGCTCGCATTTCTC--CTCTGATCTGCACA
TATCTGCATCGCTAGCTGCTGCAACTCCATCGCCCATCGGCCAAAAATGGCGGCCGATGGTGTTCAACAACCGCTGCTAT
CCGGCGGCGACGGCGACG------CAGCTGGTGCCATCCGACAGAAGCCGCCGGACGGGGTCAAGAGGTTTCGGCGCTGC
CGGACGGCTCCTTCCGCCGACC---CTGCTGCGTCGGAAGAGCCTCGTCCTCTTACTCCCCCCGGCAACGCCAGTCGGAC
CGAAAGCGCGGCCTCGCCGGCCAAGAAAGTGCTCGAGAGCGGCCGCCCGAGCTCGAGCTTCCGGCTGGTGGGAATCCTCC
TCTTCGCCTACGTCGTCGCCGGCACCACCGCCTTCTACCTCGCCATGGACCACATGTCCGGGCACCGCAGCGGCAGCCGC
GTTATCGACGCGCTCTACTTCTGCGTGGTCACCATGACCACGGTCGGCTACGGCGACCTCGTCCCGTCCAGCGACACCGG
CAAGCTGCTGGCCAGCGCGTTTGCCTTCGGCGGCGTCGCCGTCGTGGGCACCTCCCTCAGCAAGTCCGCCGACTACCTGG
TCGAGAAGCAGGAGTCGCTCGTCTTCCGCGCGGTGCACGCCAAC------GGAAAGCACCCGGCGCGGGAGCTGCGCGCC
ATGGAGATGAACAAGACGTGGTACAAGCTGTACGCGGCCGGGGCGCTGCTGGCGGCGTCGGTGGCGTCGGGGACGCTGGT
GCTTTGGAAGGGGGAGGGGATGCGGCCCGTGGACGCGCTGTACTGCGTGTGCGCGACGGTGACGACGCTCGGGTACGGGG
ACCGGAGCTTCAGGTCGTCGGCCGGGCGCGCGTTCGCGGCCGTGTGGGTGACTGTGAGCACGGTGGTGGTGGCGCTCTTC
TTCCTGTACGTGGCGGAGCTGTACGCGGAGAGGCGGCAGAGGGCGCTGGCGCGGTGGGTGCTGACGCGGCGGACGACGAA
CACTGACCTGGAGGCGGCGGACCTGGACGGCGACCGGCGCGTCGGGGCGGCGGAGTTCGTGCTGTACAAGCTCAAGGAGC
TCGGGAAGATCAGCCAGGAGGAGATCTCGGAGTTCATGGAGGAGTTCGACATGCTCGACGCTGACCACAACGGCACGCTG
TCGCCCTCGGACCTCGCCATCGCGCAGCAGGCCACCGCTTGATTTGTTGGACCATTTCCTTAGCATT-AGTATTGGTTTT
GGGGGAGTCGACAGAGAGCTCACTGTCCAAGACGTCC------------AAAATGGTGTGT-------------------
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>chr4A_910
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-----------------------------GAGTCATCGAGAACAAGAAGAGGCTCGCATTTCTC--CTCTGATCTGCACA
TATCTGCATCGCTAGCTGCTGCAACTCCATCGCCCATCGGCTAG-AATGGTGGCCGGTGGTGTTCAACAACCGCTGCTAT
CCGGCGGCGACGGCAACG------CGGCTGGTGCCATCCGACAGAAGCCGCCGGACGGGGTCAAGAGGTTTCGGCGCTGC
CGGACGGCTCCTTCCGCCGACC---CTGCTGCGTTGGAAGAGCCTCGCCCTCTTACTCCCCCCGGCAACGCCAGTCGGAC
CGAAAGCGCGGCCTCGCCGGCCAAGGAAGTGCTCGAGAGCGGCCGCCCGAGCTCGAGCTTCCGCCTGGTGGGCCTGCTCC
TCTTCGCCTACGTCGTCGCCGGCACCACCGCCTTCTACCTCGCCATGGACCACATGTCCGGGCACCGCAGCGGCAGCCGC
GTTATTGACGCGGTCTACTTCTGCGTGGTCACCATGACCACCGTCGGCTACGGCGACCTCGTCCCGTCCAGCGACACCGG
CAAGCTGCTGGCCAGCGCCTTTGCCTTCGGCGGCGTCGCCGTGGTTGGAACCTCCCTGAGCAAGTCCGCCGACTACCTGG
TCGAGAAGCAGGAGTCGCTCGTCTTCCGCGCGGTCCACGCCAAC------GGCAAGCACCCGGCGCGGGAGCTGCGCGCC
ATGGAGATGAACAAGACGTGGTACAAGCTGTACGCGGCCGGGGCGCTGCTGGCGGCGTCGGTGGCGTCGGGGACGCTGGT
GCTGTGGAAGGGCGAAGGGATGCGACCCGTGGACGCCTTGTACTGCGTGTGCGCGACGGTGACCACGCTGGGGTACGGCG
ACAGGAGCTTCACGTCGTCGGCCGGGCGCGCGTTCGCGGCGGTGTGGGTGACGGTGAGCACGGTGGTGGTGGCGCTCTTC
TTCCTGTACGTGGCGGAGCTGTACGCGGAGCGGCGGCAGAGAGCGCTCGCGCGCTGGGTGCTGACGCGGCGGACGACGAA
CACCGACCTGGAGGCGGCGGACCTGGACGGTGACCGGCGCGTCGGGGCGGCGGAGTTCGTGCTGTACAAGCTCAAGGAGC
TCGGGAAGATCAGCCAGGAGGAGATCTCAGAGTTCATGGAGGAGTTCGACATGCTCGACGCCGACCACAACGGCACGCTG
TCGCCCTCTGACCTCGCCGTTGCGCAGCCCACCACCGCTTGATTTGTTGGACCATTTCCTTAGCATTTAGTATTGGTTTT
TGGGGAGCCGACAAAGAGGTCATTGTCGAAGAATCCAAGTAAGTGGTGGAAAATGGTGTGTATTTTCAGGTGTATAAACG
TGCGGAGTACA---------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
--------------------S--S--S--------S-------------S--------------SS--------------
-----------------S----S-------------------------------------S-S----------------S
---------S-----S--SSSSSS------S-----------S------------------S------------------
--S-----S------S------SSS------------------S--S-----S-----------------------S---
--SSSSSSS-------------------------------------------S---------------------------
--S-S--------S----------------S----------SS-------------------------------------
-----------------------------S------------------------------------------------S-
---------------------S--------------------------------S-------------------------
-----------------------------------------SS-SSSSSS------------------------------
-------------S-------------------------------------------------------------S----
------------------------------------------------------------------S-------------
------------S------------------------------------S--S---------------------------
-----------------------------------------------------S-----------------------S--
---------S--------S-------------------------------------------------------------
--------------------------S-S---------------------SS----------------------------
-----------------------------------S--------S----------------S---S---S-S---S----
-S--------------------------------------------------S----------------S----------
--------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS
>forward_432
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------------ACAATGAGCTCTCTGTGGGC------------------------------------------------
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>reverse_2423
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----------------------AAAACGCGCTGCTACAAAGG--------------------------------------
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