>input_sequence_60668
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------------------------------ATGGCTTCGTCGGAGAAGCGCCGGGCGAGCACCTCGCCGTCGGCCACCGC
CCTCGCCT------CCACCACCACCACCACCACCTCAGCCTCTTCGTCCACAAACCCCACCTCGT---CGTCGCCTTACT
TCCTG------------CCGTTGGTCGCGAGCCGCCTGACGAACCTCCAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
ACCTACCGGGATCTCATCCCGCCGTCGCCGGCCAACCTCGCCTCCCAGGCTCCGCTCCTCCTCTTCCCCCGCATGGCCTC
TGCCTCGGGAGCCCTGTTTCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCCTGCACCCGCC------TAGGTC
------------------------------------------------------------------------GCCCCACC
AAATTCCACTCCTTCGGCTTCCGCGTTTCCACCCAGG------------ACC---------------GCGCCGGCTATGA
CACCTGCCGCGAGCTCCGTATCCGCCACCTCCTCACAGGCGAGCGAGCCCGCCTGCCTGATCTCCCGAGA-CCGAG----
---AGACTCTGAAGAAGTCGTCTTTTCCGGCGACCTCGTTGTCACCTTCAGGAAATGCTGCTGCGTCCTCTACTACTGCC
ACATTGG------GGATGATCACTGGCAGGCAGTGTACTGCGATGTAGGCCACCTGCCTTACGATCTGATGTTCGTGAAA
GGCACCCTCTATGCGCTGATTTACAATTACTCACATTACCGCCTCGCTGTCGTCAAGCTTGGCAAGAATTCTGCGGTATT
GTCGTTTCTTGGAGATAAATTGAGTGTGCCGGAAGTTAACT---------GTCCAAGGTTCTGGCTAGCAGAGCGTCGTC
GTGAGTTATTGCTCATTGTCGAGGTGGAGTTCGATCCATGTGTGTACCATGTTTTCTATCTGCACTCTGGGAAGAAGAAG
TGGGAGAGGACTACTAGCCTTGGTGGTTGCAGCTTGTTCTTTAATTTGCATGAGTTTGCCGGTTGCCTTGGTCCAGATCA
TCCGGCAGTTCGA----AGGGACTGCTTGTACTTCACTGGGTGCTCTGGGAAGTGGAGCGAGTATTCTTTGGCTGATGGG
TCTTATCATGAATTCGTTATCGACCACCCAGGGCGAACTG------AGGATTATGGATCTCCGGTTTGGGTCCTTCCAAG
CATTTGCTGA----------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G485200
GTTCTTTCCTCACACCTCACGCTAAACTTATTCCATGATCTGTTGGCACAAGATTTTTCGTATGATCCTTGGACATGACC
GGTTTAATCTCAGAG-GCAATAATCGAGGATAGATGGCCAACCTGGCAAGTTAGCAAAATTCTTATTGCAAAAAAAATTA
AGCTGATAAGATTTTAAAAGTTCATTGAGCCGATATGTGTGCTTCGTTCTATCTCTACAAAATGC-TAACTTGATTGTGA
TTATCTTGGATAAAATGAATAAAGGGTGCAAAGTATTGTTTGCCATTTGTTCCGAGATGTGCAACCAAAGACCACAAGAA
GCTTATCT-AAAAAAAAGACCACAAGAAGCAAGGAAGGAATTGATGAATTTGGACCTAAAAATAATGAGTTGATACATTT
TATAATGGTGATGTCAGGGAGATGTAACGTTAAAACTAAAATATGTAGTCAAAAAGTACTGGCATGTAGGAGGATAGCAT
TTCAAATGAATTA-TCATGTACAACAACATGAAAAAAGAGA---------------CAACCAACAACTCTTTTTCCAGTT
AACAATGTTATTACCCT-------------------------------------AAAGAAAGTGAACAATCTATAACACT
AC------------------------------------------------------------------------------
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------AGTTCAGCAACAAGGAAG--------------------------------------------------------
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------------------------------------------------GGGGGCATCTCTATATACATGAGAATGTTGGT
GGTTCACTATGTTGGCATAAACA-TTTTCAATACTCTTGAAGCATTGCTCTTCTTCTTCTGCCTGTATGAACATCTTATA
TTTTGATACGAAGGGAGTACTAGAA-TTTTATTTTACGCTTATACCCTATACTACTAG---ATTACAGCACATGAATTGC
CGACAGGGTAGTTTCTTTTTAGATGTCTTTTCTTTTTGGCGGGGA-----------------------------------
----TTTTTTTTTTTGAGATATCACCTCGCCAACTTC---TAAAAGTAGACGACTCAAGCCCAATAGATGGTAGGCCCAT
CCCGGCCCGGACCATGAACAGGC-------CTCCTAAGAGCCTCTAACCCTAGCATTCCACCCACCG------------T
CCCACTCCGCTGCAGAAGCGGCGGCGAGGAATGGCTTCGTCGGAGAAGCGCCGGGCGAGCACCTCGCCGTCGGCCACCGC
CCTCGCCT------CCACCACCACCACCACCACCTCAGCCTCTTCGTCCACAAACCCCACCTCGT---CGTCGCCTTACT
TCCTG------------CCGTTGGTCGCGAGCCGCCTGACGAACCTCCAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
ACCTACCGGGATCTCATCCCGCCGTCGCCGGCCAACCTCGCCTCCCAGGCTCCGCTCCTCCTCTTCCCCCGCATGGCCTC
TGCCTCGGGAGCCCTGTTTCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCCTGCACCCGCC------TAGGTC
------------------------------------------------------------------------GCCCCACC
AAATTCCACTCCTTCGGCTTCCGCGTTTCCACCCAGG------------ACC---------------GCGCCGGCTATGA
CACCTGCCGCGAGCTCCGTATCCGCCACCTCCTCACAGGCGAGCGAGCCCGCCTGCCTGATCTCCCGAGA-CCGAG----
---AGACTCTGAAGAAGTCGTCTTTTCCGGCGACCTCGTTGTCACCTTCAGGAAATGCTGCTGCGTCCTCTACTACTGCC
ACATTGG------GGATGATCACTGGCAGGCAGTGTACTGCGATGTAGGCCACCTGCCTTACGATCTGATGTTCGTGAAA
GGCACCCTCTATGCGCTGATTTACAATTACTCACATTACCGCCTCGCTGTCGTCAAGCTTGGCAAGAATTCTGCGGTATT
GTCGTTTCTTGGAGATAAATTGAGTGTGCCGGAAGTTAACT---------GTCCAAGGTTCTGGCTAGCAGAGCGTCGTC
GTGAGTTATTGCTCATTGTCGAGGTGGAGTTCGATCCATGTGTGTACCATGTTTTCTATCTGCACTCTGGGAAGAAGAAG
TGGGAGAGGACTACTAGCCTTGGTGGTTGCAGCTTGTTCTTTAATTTGCATGAGTTTGCCGGTTGCCTTGGTCCAGATCA
TCCGGCAGTTCGA----AGGGACTGCTTGTACTTCACTGGGTGCTCTGGGAAGTGGAGCGAGTATTCTTTGGCTGATGGG
TCTTATCATGAATTCGTTATCGACCACCCAGGGCGAACTG------AGGATTATGGATCTCCGGTTTGGGTCCTTCCAAG
CATTTGCTGATGCAGTA-------------------TCCACAAGTTCTCAAGGTACATTTGCTCCCTAGTGACTAGTTAC
AGTCATTTAGTTTGACATTTTCTGTTTGCCAATCAAAATATTCAAATGACTGTTTAGCAGCAAATCCAGAAGGACGGGTA
TACGTACCTGCTCCCCTTGCAATGCTTTGGTGTCTGGTCTCTTATCTATCTATCCAGAAAAAATTCTAGTGTTTGTCATT
ATAAGAGCATCTCCAGCCGTTGG-CCCCCAAGGGGGCGCCTAAAATCGCCGCCTGGAGGTGAGCCGGCGCAAAAAA-TGG
GCCT-GGGG-CGAGTTGG-CCCCCAGCCGCCGGCCCCAGGGCCGCCCCCCGGCGCGTTCAAA------AAATAAAAGTAT
ATAGCAAATTTC----------GGCGAAGTTCGGCTAA----------ACACGAC-AAA-TTTCGGCCAACTTGGGCATA
TATTTCGACAAA-GTTCGCGGATTTTCATTACATA----GCAAATATAT-AA---ACT-AATCTAAAAAAGAAACTGGCT
GAACGCCGAGTAGTCGCCG---TCGTCGCCGC------------C------ATCCTCATCGTCG-----GCCTTCTCCTT
CTTGACGCGGGCGCCCCCGCTGAACCC------G------GCGTCGCCATGGCGGACTGGTGGCAGCGGCGGCG---CGG
CGGC---GTCGTCGCTGTCGTCGATGACGACGACTCCTC-----C-TTTGTCGCGGCCCCGGCGGAGCTCCGCGAAGCGC
CGCAGGGCGGCGCACTGGCGCTCC-TCGCCATCTTCAGGGAGTCCTGACGTGTCCATTCAAGGCCTGCGTCGTCGTCGAG
CTC--GA---CCTCGC---CGTGCTCCGTCTTCATGGCGGG------------------------------GAGACCC--
-GG---------------------------CTCCGCCTTCACCGGCGCGAGCCCCGGCTCCGTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGCTACGAGTTCGCCGGCCGAGC
GGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGTGCCGGAGGAGTGCGAGGAAGAGCG
>chr3B_1
GTTCTTTCCTCACACCTCACGCTAAACTTATTCCACGATCTGTTGGCACAAGATTTCCCGTACGTTCCTTGGACATGTCC
GGTTTAATCTCAGAGGGCAATAATCAAGGATAGATGGCCAACGTCGCGAGTTAGCGAATTTCTTATTGTAAAAAAAAATA
AGCTGATAAGATTTTAAAAATTTATTGAGCCGATATGTGTGGTTCGTTCTATCTCTACAAAATGCTTAACTTGATTGTGA
TTATCTAGGATAAAATGAATAAAGGGTGTAAAGTACTGTTTGCCATTTGTTCCAAGATGTGCAACCAAAGACCAAAG---
-------------------------GAAGCTAGGAAGGAATTGATGAATTTGGGCCTAGAAAA---GAGTTGATACAACT
TATAATGGTGATGTCAGGGAGATGCAATGTTAAAACTAAAATATGTAGTTGAAAAGTACTGGTATGTAGGATGGCAGCAT
TTTAAATGAACTAGTCATGTACAACACCATGAAAAATAAACTGAAATAACTTTGATCAACCAACAGTTCTTTTTCCAGTG
AACAATGTTATTACCCT-------------------------------------AAACAAAGTGAACAATCTATAACACT
ACGACTTTTGGATTGGAGCCCATGCGTGCCCGACCAATTTTTTTGCATTGACCCAGGGCATCAGCAACCGCTTGGAAGGT
AGCCAAATATTTGGCACTCCCGGGCCGACCCAGCCATTCAGTTCACTTTTGCTTGGAATTTTACGCCAGCAGTTGGCAGG
GCGTGGGCAAGCGGAAGCTCCGCCGGTTATTTGGCACGCCCATGCATTGGCAGGGCAAACTTGGGCAGAATCCAAATAGG
CCCTACAATTCAGTAACAAGGAAG--------------------------------------------------------
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------------------------------------------------AGGGGCATCTCTTTATACATGAGAATGTTAGT
GGTTCACTATGTTGGCATAAACATTTTTCAATACTCTTGAAGCATTGCTCTCCTTCTTCTGCTTGTATGAACATCTTATA
TTTTGATATGAAGGGAGTACTATAATTTTTATTTTACGCTCATACCCTG---TACTAG---ATTACAGCACATGGATTGC
CGACAGGGTAGTTTCTTTTTAGAAGTCTTTTTTTTTGGCAGGGAA-----------------------------------
-TGTTTTTGCTTTTTGAGATATCACCTCGCCAACTTATTATAAAAGTAGACGACTCAAGCCCAATAGATGGCAGGCCCAG
CCCATCCCGGACCATCAACAGGC-------CTCCTA--AGCCTCTAACCCTAGCATTTACCGGGCACTACCAGCCAACCC
CCCACTCCGCTGCAGACGCGGCGGCGAGGAATGGCTTCGTCGGAGAAGCGCCGGGCGAGCACCTCGCCGTCGGCCACCGC
CCTCGCTC------CCACCAC------------------------------AAACCCCGCCTCTT---CGTCGCCGTACT
TCCTGCCGGAGTTGATCCCGTTGGTCGCGAGCCGGCTGACGACCCTCGAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
GCCTACCGGGATCTCCTCCCGCCGTCGCCGGCCAACCTCGCCTCCCAGGGTCCGCTCCTTCTCTTCCCCCGCATGGCCTC
TGCATCGGGGGCCCTCTTTCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCCTGCAC-----------------
----------------------------------------------AGACCTC------------------CGCTCCACC
GAATTCCACTCCTTCGGCTGCCGTGTTGCCATCCAGG------------ACC---------------GCC----------
-----GCCGCGAGCTCCGCATCCGGCACCTCCTCACAGGCGAGCGAGCCCGCCTGCCTGATCCCCCGGAA-CCGTG----
---CTACTCTGAAGAAGTCGTCTTTTCTGCCGACCTCGTCGTCACCTGCAGGCAATGGGGCCGGGTCCTCTACTACTGCC
ACATTGG------GGACGCTCGCTGGCGAGCAGCGCCGTGCGATGAAGGCCACCAGCTTTACAATATGATGTTCGTCAAG
GGCACCCTCTATGTGCTGATTTAC------CCGCATTACCGCCTTGCTGTCGTCGAGCTTGACAAGAATTCAGTGGTATT
GTCGTTTCTTGGAGATAAATTGAGTGTGCCAGAAGTTAACATTTTTCCAGGTCCAATGCTCTGGCTAGCAGAGTGTCGTG
GTGAGTTATTGCTCATTGTCGAGGTGCAGTTCCTTCCATGTGTGTACCATGTTTTCTATCTGCAATCCGGGGAGGGGAAG
TGGGCGAGGACTACTAGCCTTGGTGGTTGCAGCTTGTTCTTTAATTTGGATAAGTTTGCCGGTTGCCTTGGTCCAGATCA
TCCGGCAGTTCGGAGGGAGGGACTGCTTGTACTTCACTGGGTGCTCCGGGAAGTGGAGCGAGTATTCTTTGGCTGATGGG
TCTTATCATGAATTCGTTATCGACCACCCAGGGCGAACTG------AGGATTATGGATCTCTGGTTTGGGTCCTTCCAAG
CATTTGCTGATGCCGTA-------------------TCCAGAAGTTCTCAAGGTACATTTGCTCCCTAGTGACTAGTTAC
AGTAATTTAGTTTGACATTTTCTGTTTGTCGATCAAAATATTCAAATGACTGTTTAGCAGCAAATCCAGAAGGACGGGTA
T----ACCTGCTCCCCTTGCAATGCTTTGGTGTCTGGTCTCTTATCTATCTATCCAGAAAAAAGTCTAGTGTGTGTCATT
ATAAG---------------------------------------------------------------------------
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>chr3B_1
GTTCTTTCCTCACACCTCACGCTAAACTTATTCCACGATCTGTTGGCACAAGATACA-----------------------
-GTTTAATCTCAGAA-GCAATAATCGAGGATAGATGGCCAACCTCGCTTGTTGGCGAAATTCTTATTGTAAAAAA----A
AGCTGATAAGATTTTAAAAGTTCATTGAGCCGATATGTGTGCTTCGTTCTATCTCTACAAAATGCTTAACTTGATTGTGA
TTATCTTGCATAAAATGAATAAAGGGTGCAAAGTATTGTTTGCCATTTGCTCCTAGACGTGCAACCAAAGACTACAAGAA
GCTTTTCTAAAAAAAAAGACCACAAGAAGCGAGGAAGGAATCGATGAATTTGGACCTAAAAGTAATGAGTTCATACATTT
TATAATGGTGATGTCAGAGAGATGTAATGTTAAAACTAAAATATGTAGTTGAAAAGTACTGGCACGTAGGATGATAGCAT
TTCAAATTAATTAGTCACGTACAGCAACATGAAACAGAAACTGAAATAACTTCGATCAACCAACTGTTATTTTTCCGGTG
AACAACGTTATTACGCTGAAGAAAGTACAAAATCCTTTTCACAAAAAGAAAATAAAAGAAAGTGAACAATCTATGACACT
AC------------------------------------------------------------------------------
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------AGTTCAGCAACAAGGAAGAAAAAGTAGGATCGCATCAGGCGATCAAGGAGGCGACCGGGATCCCTTGCGCGTCG
CAGGTGACGCCTCCGGTTCCCTCTCTCTCCGTCGGCCGCTCCGGCGACGGGAGGGAGGGGGAACCCCGGGTCTGTTTGCT
AGGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGCTGCCGAGGCCATTGCGGTGGTGTCGCGTCGGAATAAGTTTCT
CCAGGCTCCGTTCGTGGTCAGGCGAGGATTTTGCCTTCGTCTAGGAGCCAGCGGTGTTGGGGATCCCCGGATCTCATCGA
GGTCGCGGGCTATGGTGGTTGGAGGTCCATCGGCACTGGCCGTTTGGATCCTCAAATGGGTGATGGATGCAGGGAGACGA
AGACCTTTCTTCTTCCTTGTTGGTATGATTTGTTGCTGTTGTTCTTCTCCTTCCTGTGCGCTGATGCTGGTGGGAGATCT
TGCTTTGTCCCGGCGGATGGCCCGGCCGCGGTGCTGGACCGGTCGGATGACTCGAGTTGTCTTCCTTCCGGAAGGGACAC
TTTTCGCGGTATTCAAAGACAAAGATGGCGACGGCTGTTGCAGGTGTGTTGGATTGATGTCAATGCCCTCTCATCGCTGG
TGTCAAGAAAGGAGGAAGCAGCGTGGCGGCAATTGTACCGTGGTCGAAGATGATGACCTGTTTGCGACTGGTTGCAGATC
CTTCTGCTGCAGGGGTCTTCTCTCAAGATTCAGGGATGATAACACAGGGCTCCGAAGATCCTCTTGTGTTATGGTTGTCT
TAGGGTACTCTAGGTGTTCTTGGTCCTTTGTGTTTACGTTTCAGTGTGCTTGTAAGAGCCAACTGCTTTGTACTGATTCG
TAATTTGAATGAAAAATAAATTCTCAAAAAAAGAAAAGCATCAAGGAAGGGGGGATCTCTATATACATGAGAATGTTGGT
GG---------------------------------------------------TTCTTCTGCCTGTATGAACATCTTATA
TTTTGATACAGAGGAAGTACTAGTG-TTTTTTTTTACGCTCATACCCTG---TACTAGTAGATTACACCACATGGATTGC
CTACAGGGTAGTTTCTTTTTAGATGTCTTTTTTTTGCGTGTCTAAAAAAAAAGACGTCTTTTTTTTGCGGTGAAGTTTTT
TTGTTTTTGTTTTTTGAGATATCACCTCGTCAACTTC---TAACAGTAGACGACCCAAACCCAATAGATGGTAGGCCCAG
CCCGGCCCGGACCATCAACAAGCCTCCTAACTCCTA--AGCCTCTAACCCTAGCATTCA---CAACG------------C
CCCACTCCGCTGCAGACGCGGCGGCGAGGAATGGCTTCGTCGGAGAAGCTCCGGCCGAGCACCTCGCCGTCGGCCACCAC
CACCACCACCTCCTCCTCCAC------------------------------AAACCACGCCTCGT---CGTTGGGTTACT
TCCTGCCGGAGCTGATCCCGTTGGTCGCGAGCCGCCTGACGACCCTCCAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
ACCTACCGGGAACTCCTCCCGCTGTCGCCGGCCAACCTCGCCTCCCAGGGTCCGCTCCTCCTCTTCCCCCGCATGGCCTC
TGCCTCGGGGGCCCTCTTTCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCCTGCACGGACCACG---------
------------------------------------------------------------------------GCCTCACC
GAGTTCTACTCATTCGGCTGCCGCGTCGCCATCCAGG------------ATCGCGACCGCTATCACACCC----------
-----GCCGCGAGCTCCGCATCCGCCACCTCCTCACAGGCGAGCGAGCCCGCCTGCCTGATCCCTTGA-------AGCCA
GAGAGACTACGAAGTAGTCCTCTTTTCCGGCGACCTCGTCGTCACCTTCAGGAAACTCTGCCGCGTCGTCTACTACTGCC
ACATTGG------GGACGCTCACTGGCGAGCAGTGCGCTGCGATGAGGGCCACCTGCTTTACGATCTGATGTTCGTGAAA
GGCACCCTCTATGCGCTGATTTACAATTACCCACATTACCGCCTCGCTGTCGTCGATCTTGACAAGAATTCTGCGGTATT
GTCGTTTCTTGGAGATAAATTGACTCTGCCGGAAGTTTATT---------GTCCAAGGTTCTGGCTAGCAGAGCGGTGTG
GTGAGTTATTGGTCATTGTAAGGGTGGAGTACAATCCATGGGTGTACATTGTTTTCTATCTGCAATCCGGGGAGGGGAAG
TGGGAGAGGACTACTAGCCTTGGTGGTTGCAGCTTGTTCTTTAATTTGCATGAGTTTGCCGGTTGCCTTGGTCCAGATCA
TCCGGCAGTTCGA----AGGGACTGCTTGTACTTCACTGGGTGCTCTGGGAAGTGGAGCGAGTATTCTTTGGTTGATGGG
TCTTATCATGAATTCGTCATCGACTGCCCAGGGCGAACAG------AGGATTGTGGATCTCCTGTTTGGGTCCTTCCAAG
CATTTGCTGATGCAGTACAATGGGGTTTCATAACTGTCCAGAAGTTTTCAAGGCACATTTGCTCCCTAGTGACGAGTTAC
ACTCGTTTAGTTTTACATTTTCTGTTTGTTAATCAAAATATTCAAATGACTGTTTAGCAGCAAATTCAGTACGATGAGTA
T----ACCTACTCCTCTTACAATGCTCTGGTGCTTGGTCTCTTCTCTATCTGGCCTGAAA--------------------
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>chr3D_982
GCAGAAG-------------------------------------------------------------------------
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----------------CGCGGCGGCGAGGAATGGCGAAGTGGGGGAAGCGCCGGACGAGGACCTCGCCGCCGGCCGCCGC
CCTCCCCT------CCACCACCAACAACATCT------------------------CCGCCTCTT---CCTCGCCGTACT
TCCTACCGGACCTGATCCCGTTGGTCGCGAGCCGGCTGACGACCCTGGAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
GCCTACCGGGCTCGCCTCCCGCTGTCGTCGTCCAACCTCGCCTCCCAGGGCCCGCTCCTCCTCGTCCACCACAAGGCCTC
TACCTCGGAGGCTCTCTTCCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCTTGCGCCCGCC------------
---GGAGCCCCATCCTCGCCTGTCTCCGCTGGCTCTTCCCTACCCGCT------TCGCCCCTGGGGACCCTAGCCCCACC
TCCTTCCACTCCTTTGGCTGCCGCGTCGCCATCCAAG------------ACGC------------CAGCC----------
-----GCCCCGAGCTCCGCATCCGCCACCTACTCACCGGCAAGCGCGCCGTAGCCCGCC-TCCCTGGCCCGCCGGA----
---AGAATATGACGCAGTTATCTTTTCCGGCGACCTCATCATTGCATTCACGCAATGGCGGCCTGACATCTACTACTGCC
GCACCGG------GCATGCTCACTGGCGAGCGGCCTGGTGTGATGGAGGCTACCAGCTTTACAGTCTGATGTCCTTGAAA
GGCACGCTCTACGCGTTGACTTAC------CCAAATTACGGCCTTGCTACCGTCGAGCTTGACAACAATTCGGTGGTGTT
ATCGTTTCTTGAAGATAAGCTGAGTGCGCAGACAGTTCTGAATTGTTCGACT------TTATGGCTCGCAGAGTGCCACG
GTCAGCTATTGCTCGTTGTCAGAACCTCTAC------------GTACCATGTTTTCCGGTGGAAGTCCGGGGAGAGGAAG
TGGGCGAGGACCCAAAGCCTTGGTGGTTGCAGCTTGTTCTTTAATTTGCATGAGTTTGCTGGTTGTCTTGGTCCAGATCA
TCCGGCAGTTCGA----AGGGACTGCTTGTACTTTACTGGGTGGTCTGGGAACTGGAGTGAGTATTCTTTGGTTGATGGA
TCTTTGCATGAGAATGATGTCGACTACCCTGGGCGAGCAGCAAGGAAGCATTTTGTACCACTGGCATGGGTCCTTCCAAG
CATTTGTTGATGTAG-----------------------------------------------------------------
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>chr3D_998
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---------------------------GGAATGGCCAAGTCGGGGAACCGCCGGACGAGGTCCTCGCCGCCGGCCACCGC
CCTCGCCT------CCGCAATCACCACGTCCT------CCTCATCCTCCACAAACCTCGAAGAAACCGCCTCGCCGTACT
TCCTACCTCAGCTGATCCCATTGACCGCGAGCCGCCTGACGACCCTCGAGGACTTCTTCGCCCTACGTGCCGCCTGCCGC
GCCTACCGGGCTCACCTCCCGCTGTCATCGTCCAACCTCGCCTCACAGGGTCCGCTCCTCCTCGTCCCCCACAAGACCTC
TGCCTCGGAAGCGCTCTTCCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCGCGCACCCCCC------TGGCCC
ATGGACGCCGCAGCCCCACCTGCTTCAGCCGTCTCTTCACCCCCCAAGACCTC------------------AGCCTCACC
TGCTTCCACTCCTTCGGCTGCCGCGTCGCCATACAACGCATGAGCGCCAACGC------------CAGCC----------
-----GCCCCGAGATCCGCATCCGCCACCTCCTCACAGGTGAGCGAGCCCGCCTGCCCGATCCCCCTGAA----------
----TGCGTTGGAGGTGTTCTCTTTTCCGACGACCTAATCCTCGCCTTCACGCCATGGCACCGGGACATCTACTACTGCC
GCATTGG------GGATGCTCAGTGGCAAGCGGCGCGGTGCGACGAATGCTACCACGTTTACAGTCTGATGTTCGTGAAA
GGCACCCTCTACGCGTTGATTTAT------CCAAATTATCGTCTTGCTGTTGTCGAGCTTGACAAGAATTATGTGGTATT
GTCGTTTCTTGGTGAGGAACTTAGCCCACAGACAGTTCCAAAAAGTTCGGT------GGCCTGGCTCGCAGAGTGTCAGG
GTGAGCTAATGCTAATTATCAAAAT------------CAGGTTGTATCGTGTTTTCCAGTGGGGATCCGGGGAAAGGAAG
TGGGCGAGGACACATAGCCTTGGTGGTTGCAGCTTGTTCTTTAATATGCATGAGTTCGCTGGTTGCCTTGGTCCAGATCA
TCCGGGAGTTCGA----AGAGACTGCTTGTACTTTACTGGAAGCCTTGGGAACTGGAGCGAGTATTCTCTGGTTGATAGA
TCTTTGCATGAAATTATTGCTGACTACCCAGGGCAAGCAGTACGGAAGGATTTTGTGCCACTGGCTTGGGTCCTTCCAAG
CATTTGTTGATGCAGTA---------------------------------------------------------------
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>chr3B_1127
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-----------------CCGCTGGTCGCGAGCCGGCTGACGACCCTCGAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
GCCTACCGGGCACGCCTCCCGCTGTCGTCGTCCAACCTCGCCTCGCAGGGCCCGCTCCTCCTCGTCCGCCACAAGGCCTC
TACCTCGGAGGCTCTCTTCCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCTTGCGCCGGCCAGG---------
------GCCCCATCCTCACCTGTCTCCGCTGGCTCTTCCCTGCCCGCGTCGGCGTCGCCCTTGGGAACCCTAGCCCCACC
TCCTTCCACTCCTTCGGCTGCCGCGTCGCCATCCAAG------------ACGC------------CAGCC----------
-----GCCCCGACCTCCGCATCCGCCACCTACTCACAGGCAAGCGAGCCGGAGCCCGCC-TCCCTGGACCGCCAGA----
---AGAGTGTGACGCAGTTATCTTTTCCGGCGACCTCATCATTGCATTCACGCGATGGCAGCCTGACATCTACTACTGCC
GCACCGG------GGATGCTCACTGGCGAGCGGCCTGGTGTGATGGAGGCTACCAGCTTTACAGTCTGATGTCCTTGAAA
GGCACGCTCTATGCGTTGACTTAC------CCGAATTACGGCCTTGCGACCGTCGAGCTTGACAACAATTCGGTGGTGTT
ATCGTTTCTTGAAGATAAACTGAGTGCGCAGACAGTTCTGAATTGTTCGACT------TTATGGCTCGCAGAGTGCCACG
GTCAGCTATTGCTCGTTGTCAGAACCTCTAC------------GTGCCATGTTTTCCGGTGGAAGTCCGGGGAGAGGAAG
TGGGCGAGGACCGAAAGCATTGGCGGTTGCAGCTTGTTCTTTAATTTGCATGAATTTGCCGGTTGTCTTGGTCCAGATCA
TCCGGCAGTTCGA----AGGGACTGCTTGTACTTTACTGGGTGGTCTGGGAACTGGAGTGAGTATTCTTTGGTTGATGGA
TCTTTGCATGAGAACGTTGTCGACTACCCTGGGCAAGCAGCAAGGAAGAATTATGTACCACTGGCATGGGTCCTTCCAAG
CATCTGCTGATG--------------------------------------------------------------------
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>chr3B_1130
TTGA----------------------------------------------------------------------------
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------------------------TCGCGAGCCGGCTGACGACCCTCGAGGACTTCTTCGCCCTCGTTGCCGCCTGCCGC
GCCTACCGGGCTCACCTCCCGTTGTCATCGTCCAACCTCGCCTCGCAGGGTCCGCTCCTCCTCGTCCACCACAAGACCTC
TGCCTCGGAAGCGCTCTACCACGTCCCCCTCCGCCGCATCCTCCGCTTCCGCCTCCCGCGCACCCCCGTGGCGGTGGCCC
ATGGACGCCGCAGCCCCACCTGCTTCAGCCGGCTCTTCACCCCCAAAGAAGTC------------------ACCCTCACC
TGCTTCCACTCCTTCGGCTGCCGTGTCGCCATCAGAAACATCTTTAC---CGC------------CAGCC----------
-----GCCCCGAGTTTCGCATCTGCCATCTCCTCACAGGCGAGCGAGCCCGCCTGCCCCATCCCCCTA-------C----
---ACCCATTGGATGTGTTCTCTTTTCTGGCGACTTAGTCCTCGCCTTCATGCCACGGCACCGTTACATCTCCTACTGCC
GCATTGG------GGATGCTCAGTGGCAAGTGGCGTGGTGCGACGAAGGCTACCACCCTTACAGTCTGATGTTCGTGAAA
GGAACCCTCTACGCGTTGATTTAT------CCAAATTACCGTCTTGCTGTTGTCGAGCTTAACAACAATTCTATGGTATT
GTCGTTTCTTGGGGATGAACTTAGCGCACAGACAGTTCCAGATAGTTCGGT------GGCCTTGCTCGCAGAGTGCCATG
GTGAGATATTGCTAATTGTCAGAAC------------CAAGTTGTACCATGTTTTCAAGTGGCAATCCGGGGAGAAGAAG
TGGGCGAGCACTGACAGCCTTGGTGGTTGTAGCTTGTTCTTTAATAGGCATGAGTTTGCTGGTTGCCTTGGTCCAGATCA
TCCAGGAGTTCGA----AGAGACTGCTTGTACTTTACTGGAAACTTTGGGTACTGGAGTGAGTATTCTTTGGTTGATAGA
TCTTTGCATGAAATTCTTGCCGACTACCCAGGGCGACCACTACGGGAGGATTGTTTTCCACTGGCTTGGGTCCTTCCGAG
CATTTGTTGATGTAGTA---------------------------------------------------------------
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>chr3B_1131
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---------------------TGGTCGCGAGCCGACTGACGACCCTACAGGATTTCTTCGCCCTCCGCGCCATCTGCCGC
ACCTACCGGGCTCTCCTCCCGCTGTCGCAGTCCAACCTCGCCTCCCAGGCTCCGCTCCTCCTCGTCCCGCACAAGGCATC
TTCCTCGGAAGCCCTCTTCCACATCCCACTCCGCCGCATCCTCCGCTTTCGCCTACCCCGCACCCCCTTAG---------
---------------------------------------CCCACCGCGACCCC------------------AACAATGCC
GAATTCCATTCCTTCGGTTGCCGTGTCGCCATCGAAGACAGCGATGCCATGGG------------CAGCC----------
-----ACCTCGAGCTCCACATCTGCCACCTCCTTACAGGCCAGCAAGTCCGCCTGCCCGATCCCCCAA-------A----
---AGACTACGAAGGAATCATCTTTGCCGGCGATCTCGTCCTCACCTTTAATCGATACTACCACACCGTCCGCTACTGCC
GCATTGGAGGCAAGGACAATGACTGGCGAGCAGCGCGGTGCGCTGAAGGCTACGGGCTTCGTGACCTGATTTCCCTGAAT
GGCACCCTCTACGCATTGATTTTT------CCAAATTACTGCCTCGCTGTCGTCGAGCTTGACAACAGTTACGTGGTATT
GTCGTTTCTTGGTGGTGAATTGAGTGCAGAGACAGTTGAGAATTCTTCAAT------GTTGAGGCTAGCAGAGTGCCGTG
GTGAGCTATTGCTCATTAGTGCTGTTAGGTACCCGGTGG---GGTACCAAGTTTTCCAGTGGCAATCTGGGGATAGGAAG
TGGGTGAGGACTACTGCCCTTGGTGGGTGTAGCTTGTTCTTTAATATTCTCCAGTTTGCAGGTTGCCTTGGTCCAGATCA
TCCAGCAGTTCAA----GGGAACTGCTTGTACATCATTAAGTACAATGGGCAGTGTATCAAGTATTCTCTGGTTGATGGA
TCTTCGCATGAACTCGTTGCCGACTACCCAGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr3A_1134
--------------------------------------------------------------------------------
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------------------------TCGCGAGCCGGCTGACGACCCTACAGGATTTCTTCGCCCTCCGCGCCACCTGCCGC
ACCTACCGGGCTCTCCTCCCGCTGTCGCCGTCCAACCTCGCCTCCCAGGCTCCGCTCCTCCTCGTCCCCCACAAGGCATC
TTCCTCGGAAGCCCTCTTCCACATCCCACTCCGCCGCATCCTCCGCTTCTGCCGCCCCTGCACCACCCTAG---------
---------------------------------------CCCAACAAGACCCC------------------AGAAACACT
GAATTTGATTCCTTCGGTTGCCGTGTCGCCATCAAAGACAGCG------TGGC------------CAGCC----------
-----ACCGTGAGCTCCGCATCTGCCACCTCCTCACATGCGAGCGAGTCCGTCTACCCGATCCCTGGA-------A----
---AGGCTACGAAGGAATCATCATTACCGGCAACCTCGTCCTCACCTTTAATCGATACCACCACACCCTCCATTATTGCC
GCATTGG------GGACAATCACTGGCGGGAGGCGCGGTGCGATGAAGGCTACAGGTTTCGTGACCTGATTTTCGTGAAA
GGCACCCTCTACGCATTGATCTAT------CCAAATTACCGCCTCGTTGTCGTTAAGCTTGACAACAATTCTGTGGTATT
CTCGGATCTTGGAGATGCATTAAGTGCAGAGATAGTTCCGTACTGTTCGAT------GTTCTGGCTAGCGGAGTGCCGCG
GTGAGCTATTTCTCATTGTCTCT---GAGTACCGTGCACTCAGGTACCATGTTTTCCGGTTGCAA------GAGAGGAAG
TGGGTGAGGACTACTAGCCTCGGTGGGTGTAGCTTGTTCTTTAAT-----------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chrUn_1355
--------------------------------------------------------------------------------
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---TTCCACTCCTTCGGCTGTCCCGTCTCCATACAAGGCATGAGCGCCAGCGC------------CAGCC----------
-----GCCCCGAGCTCCGCATCCGCCACCTCCTCACAGGCGAGCGAGCCCGCCTACCCGATCCTCCGA-------A----
---ATGCGTTGGAGGTATTCTCTTTTCCAATGACCTAATCCTTGCCTTCACGCCATGGCACCGCGACACCTACTACTGCC
GCATTGG------GGTTGCTCAGTGGCAAGCGGCGCGGTGCGATGAGGGCTACAACATTCACAGTCTGATGTTCGTGAAA
GGCACCCTCTATGCGTTGATTTAT------CCAAATTATCGTCTTGCTGTTGTCGAGCTTGACAACAATTCCGTGGTATT
GTCGTTTCTTGGGGAAGAACTTAGCGCACGTACAGTACCAGATGGTAATTTGGC---GGCCTGGCTCGCAGAGTGTCATG
GTGAGCTATTGCTAATTATCAGAAG------------AAGGCTGTACCGTGTGTTCCAGTGGCAATCCAAGGAGAGGAAG
TGGGCGAGGACACATAGCCTTGGTGGTTGTAGCTTGTTCTTTAATATGCATGAGTTTGCTGGTTGCCTTGGTCCAGATCA
TCCGAGAGTTCGA----AGAGACTGCTTGTACTTCACTGGAAGCTTTGGGAACTGGAGCAAGTATTCTTTGGTTGATAGA
TCTTTGCATGAAATTGTTGCCAACTACCTAGGGCAATCAGTATCGAAGGATTTTGTATCACTGGCTTGGGTCCTTCCAAG
CATTTGTTGATGCAGTA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chrUn_1410
--------------------------------------------------------------------------------
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-----GCCCCGAGTTTCGCATCTGCCATCTCCTCACAGGCGAGCGAGCCCGCCTGCCCCATCCCCCTA-------C----
---ACCCATTGGATGTGTTCTCTTTTCTGGCGACTTAGTCCTCGCCTTCATGCCACGGCACCGTTACATCTCCTACTGCT
GTATTGG------GGATGCTCAGTGGCAAGTGGCGTGGTGCGACGAAGGCTACCACCCTTACAGTCTGATGTTCGTGAAA
GGAACCCTCTACGCGTTGATTTAT------CCAAATTACCGTCTTGCTGTTGTCGAGCTTAACAACAATTCTATGGTATT
GTCGTTTCTTGAGGATGAACTTAGCGCACGGACAGTTCCAGATAGTTCGGT------GGCCTTGCTCGCAGAGTGCCATG
GTGAGATATTGCTAATTGTCAGAAC------------CAAGTTGTACCATGTTTTCAAGTGGCAATCCGGGGAGAAGAAG
TGGGCGAGCACTGACAGCCTTGGTGGTTGTAGCTTGTTCTTTAATAGGCATGAGTTTGCTGGTTGCCTTGGTCCAGATCA
TCCAGGAGTTCGA----AGAGACTGCTTGTACTTTACTGGAAACTTTGGGTACTGGAGTGAGTATTCTTTGGTTGATAGA
TCTTTGCATGAAATTCTTGCCGACTACCCAGGGAGACCACTACGGGAGGATTGTTTTCCACTGGCTTGGGTCCTTCCAAG
CATTTGTTGATGTAGTA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr7A_2311
TTACTA--------------------------------------------------------------------------
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---AGAGTATCTTCAGCCGTTGG-CCCCCCAGGGGGCGCCTAATATCGCCACCTGAGGATGAGCCGGCGCAAAAAA-TGG
GCCTGGGGG-CGAGTTGG-TACCCAACCGCCGGCCCCAGGGCCGCCCCCAGGCGCGATTAAA------AAAAG------T
ATATCAAATTTC----------GGCAAAGTTCGGCGAAGTTCGGCTGAACACGACTAAA-TTTCGGCAAACTTGGGCATA
TATTAGAC---ATGTTCGCGGTTTTTCATTACACA----GCAAAATAGATAAC-----TAATCTAA-AAAAAAACTGGCT
GAACGCCGAGTAGTCGCCG---TCGTCGCCGC------------C------A------TCGTCG-----GGCTTCTCCTC
CTTGATGCGGGCGTCCCTGGTGGACCCCTGACCG------GCGTCGCCAACGCGGGCTGGT---GGCGGCGGCG---CGT
CGTC---GTCGTCGCTGTCCTCGATGACGATGACGCCTC-----C-TTCGTCGCGGCCCCGGCGGCGCTGCACGAAGTGC
TGCAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCGCGCGCGCCCATTCCAGGGCCGCGTCGTCGTCGAG
CTC--GA---TGTCGCCATCGTGCTCCGTCTTCACTGTGGG------------------------------GAGGAGGCC
AGG---------------------------CTCCATCTTCACCGGCGCGAGCCCTGGCTCCGTCTTGGGCTTGACGAAGC
ACGAAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCTTCGTTGATGACGATGCCGGCGCTGCGAGTGCGTCGTCCGAGC
AGCGTCTGCGCCGCGGGCTCGGCCTTGACGCCGAGCAACGCCGGAGAGCCGGAGGAGTGCGAAGAAGAGCG
>chr7D_2314
--------------------------------------------------------------------------------
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-TAAGAGCATCTCCAGCCATTGG-CCCCCCAGGGGGCGCCTAAAATCGCCGCCTGGGGGTGAGCCGGCGCAAAATA-TCG
GCCTGGGGG-CGAGTTGG-TCCCCAGCCGCCGGCCCCAGGGCCGCCCCCAGGCGTGTTCAAA------AAAGAAAAATAT
ATAGCAAATTTC----------GGCGAAGTTCGGCTAA----------ACACGACTAAA-TTTCGGCAAACTTGGGCATA
TATTATAC---A-GTTCGCGGATTTTCATTACATA----GCAAATATAT-AA----CT-AATCTAAAAAAGAAACTGGCT
GAACGCCGAGTAGTCGCCG---TCGTCGCCGC------------CGTCGTCA------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------G------GCGTCGCCATGGCGGACTGGTGGCGGCGGTAGCG---CGT
CGTCGTCGTCATCGTTGTCGTCGATGACGACTCCTCCTC-----C-TTCGTCGCGGCCCCGGCGGCGCGGCGCGAAGCGC
CGCAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTGGCGTGCCCATTCCAGGGCCGCGTCGTCGTCGAG
CTC--CA---CGTCGT---CGTGCTTCGTCTTCACGGCGGG------------------------------GAGACCC--
-GG---------------------------CTCCGTCTTCACCGGCGCGAGCCCTGGCTCCGTCTTTGGCTTGACAAAGC
GT---GGAGGAGCCGACGAGGAGGAGCGCCGGTCACCCTCGTTGATAACGATGCCGGCACTGCGAGTGCGCCGGCCGAGC
GGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCCGGAGGAGTGGGAGGAAGAGCG
>chr4A_2314
--------------------------------------------------------------------------------
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-TAAGAGCATCTCCAGCCGTTGA-CTCTTCAGGGGACGCCTAAAATCGCAGC--GAGGGTGAGCCGACGCAAAAAA-TTG
GTCT-AGGG-TGAGTTGG-TCCGTAGCCGCCAGCACCAGCACCGTCCCCGCGCGCATTCAAA------AAATAAAAGTAT
ATAGCAAATTTC----------GGCAAATTTTGGCTAA----------ACATGAT-AAA-TTTCGTCCAGCTTGAGCATA
TATTTCGACAGA-GTTCGCGGATTTTCATTACATA----GCAAATATGTAAA----CT-AATCTAAAAAAGAAACTGGCT
GAACGCCGAGTATTCGCCGCCATCGTCACCGC------------C------G------TCATCAACGTCGCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------GA------CGTCGCCATGGCGGACTGGTGGCGGCGGCGGCG---CGT
CATC---GTCGTCACTGTCGTCGATGACGACGACGACTC-----C-TTTGTCGCGGCCCCGGCGGCGCTCCGCGAAGCGC
CACAGGGCGGCGCACCGGCGCTCCCTCGCCATCTTCAGGGAGTCATGGCATGCCCATTCAAGGGCCGCGTCGTCGTCGAG
CTC--GA---CCTCGC---CGTGCTCCGTCTTCACGGCGGG------------------------------GAGACCC--
-GG---------------------------CTCCACCTTCATCGGCGCGAGCCCCGGCTCCGTCTTTGACTTGACGAAGC
GCGGAGGAGGAGCCGACGGGGAGGCGCGCTGGCTGCCCTCGTTGATGACGATGTCGGCGCTGCGAGTGCGCCGGCTGAGC
AGCATCTCCGCCGCGGGCTCGGCCTTGACGCCGAACAGCGCCGGAGTGCCGGAGGAGTGCGAGGAAGAGCG
>chr5D_2314
--------------------------------------------------------------------------------
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-TAAGAGCATCTCCAGCCGTTGG-CCCCCC-GGGGGCGCATAAAATCGCCGCCTGGGGGTGAGCCGGCGCAAAAAAATCG
GCCTGGGAG-CGAGTTGGTCCCCCAGCCGCCGGCCCCAGGGCCGCCCCCAGGCGCGTTTAAA------AAGGAAAATTAT
ATAGCAAATTTC----------GGCAAAGTTCGGCTAA----------ACACGAC-AAAATTTCGGTAAACTTGGGCATA
TATTAGAC---ATGTTCGCAGATTTTCATTACATA----GCAAATATAT-AA----CT-AATCTAAAAAAGAAACTGGCT
GAACGCCGAGTAGTCGCCG---TCGTCGCCGCTGTCGG------C------A------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------GGCGTTGGCGTCGCCATGGCGGACTGGTGGCGGCGGCGGCG---CGT
CATCGTCGTCGTCGCTGTCGTTGATGATGACGACTCCTT-----C-TTCGTCGCGGCCCCGACGGCGCTGCGTGAAGCGC
CGCAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCCTGGCGTGCTCATTCCAACGCCGCCCTGCTC-----
----------CGTCGT---CGTGCTCCGTCTTCACGGCGGG------------------------------GAGACCC--
-GG---------------------------CTCC---------------------------GTCTTTGGCTTGACGAAAC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGCGCTGCGAGTGCGCCGGCCGAGC
GGCGTCTCCGCCGCGGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGAGCAGGAGGAGTGGGAGGAAGAGCG
>chr3B_2316
--------------------------------------------------------------------------------
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---AGAGCATCTCCAGCCGTTGG-CCC-TCAGGAGGCGCCTAAAATCGCCGCCTGGGG-TGACCCGGCGCAAAAAA-TGG
ACCT-GGGG-CGAGTTGG-CCCCCAACCGCCGCCCCCAAGGCCGCCCCCAGGCGCGTTTAAA------AAATAAAAATAT
ATAGCAAATTTA----------GGCAAAGTTTGGCTAA----------ACATGAC-AAA-TTTTGGCAAACTTGGGCATA
TATTAGAC---ATGTTCGCGGATTTTCATTACATACGTAGCAAATATAT-AA---ACTTAATCT---AAAAAAACTGGCT
GAACGCCGAGTAGTCGCCG---TCGTCGCCGC------------C------A------TCGTCG-----GCCTTCTCCTC
CTTGACTCGGGCGCCCCTGCTGGACCCCTCCCCGG---------------------CTGGTGGAGGCGGCGGCGCGTCGT
CGTC---GTCGTCGCTGTCGTCGATGATGACGACT------CCTC-TTCGTCGCGGCCTCGGCGGCGCTGCACGAAGCGC
CGTAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTCTTGGCGTGCCCATTCAAGGGCCACGTCGTCGTCGAG
CTC--GA---CCTCGC---CGTGCTCCATTTTCACGGCGGGGAGA---CCCGGCTTCGTCTTCCCCGGCGCGAGCCCC--
-GA---------------------------CTCC---------------------------GTCTTCGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGCTGATGACGATGCCGGCCCTGCGAGTGCGCCGGCCGAGC
GGCGTCTCCGCTGCGGGCTCGGCCTTGACGCCGAGCAGCGTCGGAGTGCCGGAGGATTGGGAGGAAGAG--
>chr4A_2316
--------------------------------------------------------------------------------
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---AGAGCATCTCCAGACGTTGGCCCCCCCAGGGGGCGCCTAAAATCGCCGCCTGGGGGTGAGCCGGCGCAAAAAA-TGG
GCTTAGGGG-CGAGTTGG-TCCCAAGCCGCCGGCCCCAGGGCCGCCCCCAGGCGCGATTAAATA--AAAAAAG------T
ATAGCAAATTTT----------GGCACAGTTCAGCTAA----------ACATGAC-AAA-TTTCGGCCAACTTGGGCATA
TATTTGGACAAA-GTTCACCGATTTTCATTACATA----GCAAATATAT-AA---ATT-AATCTAAA--AGAAACTTGCT
GAACACCTAGTAGTCGCCA---TCGTCGCCGCCATCCTAG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGTGGGCGCCCCTGCTGGACCC------------GGCGTCGCCATGGCGGACTGGTGGCGGCGGTGGCG---CGT
CGTC---GTCGTCGCTGTCGTCGATGACGACGACT------CCTCATTCGTCGCGGCCCCTGCGGCGCTCCGCGAAGCAC
TGCAGGGTGGCACACTGGCGCTCCATCGCCATCTTGTGGGCGTCCTGGCGTGCCCATTCAAGGGCCGCATCATCATC--G
CGC--GA---CCTCGC---CGTGTTCCATCTTCACGGCGGT------------------------------GAGCCCC--
-GGCTCTGCCTTCACTGGCGTGAGCCCCGACTCC---------------------------GTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCAGCGCTGCGAGTGCGCCGGCCGAGC
GGCGACTCCGCCGCGGGTTTGGCCTTGATGCCGAGCAGCGCCGGAATGCCAGAGGAATGCGAGGAAGAGCG
>chr4A_2316
--------------------------------------------------------------------------------
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---AGAGCATCTCCAGCCGTTGG-CCCCCCAGGAGGCACCTAAAATCGCCGCCTAGGGGTGAGCCGGCGCAAAAAA-TGG
GCCTGGGGG-CGAGTTGG-TCCCCAGCCGCCGGCCCTAGGGCCGCCCCCAGGCGCGTTTAAA------AAAAG------T
ATAGCAAATTTC----------GGCAAAGTTCGGCTAA----------ACACGACTAAA-TTTTGGCAAACTTGGGCATA
TATTAGAC---ATGTTCGCGGATTTTCATTACATA----GCAAAATAGATAAC-----TAATCT---AAAAAAACTGGCT
GAACACCGAGTAGTCGCCG---TCGTCGCCGCCATCGTCACCGCC------A------TCGTCG-----GGCTTCTCCTC
CTTGACGCGGCCGTCCCTGGTGGACCCCTGACCG------GCGTCGCCAACGCGGGCTGGT---GGCGGCGGCG---CGT
CGTC---GTCGTCGCTGTCCTCGATGACGATGACGATGATGCCTCCTTCGTTGCGGCCCCGGCGGCGCTGCGCGAAGCGC
TGCAGGGCGGCGCACTGGCGCTCCCTCGCCATCTTCAGGGAGTTCGCGTGCGCCCATTCCAGGGTCGTGTCGTCGTCGAG
CTC--GATGTCGCCGC---CGTGCTCCGTCTTCACCGCGGGGAGGAGGCCCGGCTCCGTCCTCACCGGCGCGAGCCCC--
-GG---------------------------CTCC---------------------------GTCTTGGACTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGATGCGCGCCGGCTGCCCTCGTTGATGACGATGCCGACGCTGCGAGTGCGCCG-------
-----------------------------------------------------------------------
>chr3A_2316
--------------------------------------------------------------------------------
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---AGAGCATCTCTAGCAGTTGG-CCCCCCAGGGGGCGCCTAAAATCGCCGCCTGGGGGTGAGCCGGCGCAAAAAA-TGG
GCATGGGGG-CGAATTGG-TCCCCAGCCGCCGGCCCCAGGGCCGCCCCCAGGCGCTTTTAAAAAAT-AAAAAG------T
ATAGCAAATTTC----------GGCACAGTTCGGCTAA----------ACACGAC-AAA-TTTCGGCCAACTTGATCATA
TATTTGGACAAA-GTTCGCCGATTTTCATTACATA----GCAAATATAT-AATAAACT-AATCTAAA--ACAAACTGGCT
GGACACCGAGTAGTCGCCG---TCGTCGCCGCCATCCTCG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------------AGCGTCGCCATGGCGGACTGGTGGCGGTGGCGGCG---CGT
CATC---GTCGTCGCTGTCGTCGATGACGACGACT------CCTCCTTCGCCGCGGCCTTGGCGGCGTTCCGCGAAGCGC
TGCAGGGCGGCGCACTAGCGCTCCATCACCATCTTGAGGGAGTCCTGGCATGCCCATTCAAGGGCCGCATCGTCGTC--G
CGCTCGA---CCTCGC---CGTGCTCCGTCTTCACGGCGG------------------------------CGAGCCCC--
-GG---------------------------CCCC---------------------------GTCTTTGGCTTGACGAAGC
GCGAAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTAATTGATGACGATGCCGGCGCTGCAAGTGCGCCGGGCGAGC
GGCGTCTCCGCCGCAGGCTCGGCCTTGACGCCGAGCAGCGCCGGAGTGCCGGAGGAGTGCGAGGAAGAGCG
>chr4D_2316
--------------------------------------------------------------------------------
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---AGAGCATCTTCAGCCGTTGG-CCCCC---GGGGCGCCTGAAATCGCAACCTGGGG-TGAGCCGGCACAAAAAA--GG
GCCT-GGGG-CGAGTTGG-TCCCCAGCCGTCGGCCCCAGGGCCGCCCCCAGGCGCGTTTAAAAATAAAAAATG------T
ATAGCAAATTTC----------GGCACAGTTCGGCTAA----------ACACGAA-AAA-TTTCGGCCAACTTGGGCATA
TATTTCGAAAAA-GTTCGCCGATTTTCATTACATA----GCAAATATAT-AATAAGCT-AATCTAAA--AAAAACTGGCT
GAACACCGAGTAGTCGCCG---TCGTCGCCGCCATCCTCG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCC-TGCTGGACCC------------GGCGTCGCCATGGCGGACTGGTGGTGGCGGCGGCG---CGT
CGTC---GTCGTCGCTGTCGTCGATGACGACGACT------CCTCCTTCGTCGCGGCCCCGGCGGCGCTCCGCGAAGCGC
TGCAGGGCGGTGCACTGGCGCTCCCTCGCCATCTTGAGGGAGTCCTGGCGTGCCCATTCAAGGGCCGCGTCATCGTC--G
CGCTCGA---CCTCGC---CGTGCTCCGTCTTCACGGCGGCGAGC---CCCGGCTCTGCCTTCACCGGCGCGAGCCCC--
-GG---------------------------CTCC---------------------------GTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGGCGAGGAGGCGCGCCGGCCGCCCTCGTTGATGACGATGCCGGC----------------------
-----------------------------------------------------------------------
>chr3A_2338
CCCAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------GGGGCGCCTAAAATCGTCGCTTGGGGGTGAGTCGGTGCAAAAAA-TGG
GCTTGGGGGGCGAGTTGG-TCCTCAGCCGCCGGCCCAAGGGCCGCCCCCAGACGCGATTAAATAAAAAAA---------T
ATAGCAAATTTTGGCACAGTTGGGCGAAGTTCGGCTAA----------ATACGAC-AAA-TTTCGGTCAACTTGGGCATA
TATTTGGACAAA-GTTCGCCGATTTTCATTACATA----GCAAATATAT-AA---ACT-AATCTAAA--AGAAATTTGCT
GAACACCGAGTATTCGCCG---TCGTCGCCGCCATCCTCG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------------GGCGTCGCCATGGCGGACTGGTGGCGGCGGTGGCG---TGT
CGTT---GTCGTCGTTGTCGTCGATGACGACGACT------CCTCCTTCGTCGCGGCCCCGGCGGCGCTCCGCGAAGCGC
TGCAGGGCGGCGCACTGGCGCTCCATCGTCATCTTGAGAGAGTCCTGGCCTGCCCATTCAAGGGTCGCGTCGTCGTC--G
CGCTCGA---CCTCGC---CGTGCTCCGTCTTCACGGCGGCGAGC---CCCGGCTCTGCCTTCACCGGTGCGAGCCCC--
-GG---------------------------CTCC---------------------------GTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGCTGATGACGATGCCGGCGCTGCGAGTGCGTCGGCCGAGC
GACGACTCCGCCGCGGGTTCGGCCTTGACGCCGAGCAACGCCGGAGTGCCGGAGGAGTGCGAGGAAGAGCG
>chr3A_2338
CCCAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------GGGGCGCCTAAAATCGTCGCTTGGGGGTGAGTCGGTGCAAAAAA-TGG
GCTTGGGGGGCGAGTTGG-TCCTCAGCCGCCGGCCCCAGGGCCGCCCCCAGACGCGATTAAATAAAAAAA---------T
ATAGCAAATTTTGGCACAGTTGGGCGAAGTTCGGCTAA----------ATACGAC-AAA-TTTCGGTCAACTTGGGCATA
TATTTGGACAAA-GTTCGCCGATTTTCATTACATA----GCAAATATAT-AA---ACT-AATCTAAA--AGAAATTTGCT
GAACACCGAGTAGTCGCCG---TCGTCGCCGCCATCCTCG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------------GGTGTCGCCATGGCGGACTGGTGGCGGCGGTGGCG---CGT
CGTT---GTCGTCGTTGTCATCGATGACGACGACT------CCTCCTTCGTCGCGGCCCCGGCGGCGCTCCGCGAAGCGC
TGCAGGGTGGCGCACTGGCGCTCCATCGTCATCTTGAGAGAGTCCTGGCGTGCCCATTCAAGGGTCGCGTCGTCGTC--G
CGCTCGA---CCTCGC---CGTGCTCCGTCTTCACGGCGGCGAGC---CCCGGCTCTGCCTTCACCGGTGCGAGCCCC--
-GG---------------------------CTCC---------------------------GTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGCTGATGACGATGCCGGCGCTGCGAGTGCGTCGGCCGAGC
GACGACTCCGCCGCGGGTTCGGCCTTGATGCCGAGCAACGCCGGAGTGCCGGAGGAGTGCGAGGAAGAGCG
>chr3A_2338
CCCAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------GGGGCGCCTAAAATCGTCGCTTGGGGGTGAGTCGGTGCAAAAAA-TGG
GCTTGGGGGGCGAGTTGG-TCCTCAGCCGCCGGCCCCAGGGCCGCCCCCAGACGCGATTAAATAAAAAAA---------T
ATAGCAAATTTTGGCACAGTTGGGCGAAGTTCGGCTAA----------ATACGAC-AAA-TTTCGGTCAACTTGGGCATA
TATTTGGACAAA-GTTCGCCGATTTTCATTACATA----GCAAATATAT-AA---ACT-AATCTAAA--AGAAATTTGCT
GAACACCGAGTAGTCGCCG---TCTTCACCGCCATCCTCG------------------TCGTCG-----GCCTTCTCCTC
CTTGACGCGGGCGCCCCTGCTGGACCC------------GGCGTCGCCATGGCGGACTGGTGGTGGCGGTGGCG---CGT
CGTT---GTCGTCGCTATCGTCGATGACGACGACT------CCTCCTTCGTCGCGGCCCCGGCGGCGCTCCGCGAAGCGC
TGCAGGGCGGCGCACTGGCGCTCCATCGTCATCTTGGGAGAGTCCTGGCGTGCCCATTCAAGGGTCGCGTCGTCGTC--G
CGCTCGA---CCTCGC---CGTGCTCCGTCTTCACGGCGGCGAGC---CCCGGCTCTGCCTTCACCGGTGCGAGCCCC--
-GG---------------------------CTCC---------------------------GTCTTTGGCTTGACGAAGC
GCGGAGGAGGAGCCGACGAGGAGGCGCGCCGGCCGCCCTCGCTGATGATGATGCCGGCGCTGCGAGTGCGTCGGCCGAGC
GACGACTCCGCCGCGGGTTCGGCCTTGACGCCGAGCAACGCCGGAGTGCCGGATGAGTGCGAGGAAGAGC-
>SNPs
-----------------------------------S--------------------SS----S-S------------S--
--------------------------------------------S--S-------S------------S--------S--
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----S-------------------------S-------------------------------------------------
---------------------------S---------------------SS--------------------S--------
------------------------------------SS-SS------------------------SS------------S
--------------------------------------------------------------------------------
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---------------------------------------------------S----------------------------
----------------------------------------S-------SSSS----------------------S-----
-------------------------------S----S-SS---S------------------------------------
--------S----------------------------------------------------------------------S
---------------S--------------------SS--------------------SS-S-----------------S
----------------S---------------------------------------------------------------
-------------------------------SSSSSSS----S--S------------S---------------------
------------------------------------------S-------------------------------------
---------------S----------------------------------------------------------------
---------------S-----------------------------------------------------------S-SS-
--------------------------------------------------------------------------------
S------------------S-----------S-------------------------------------SSSSSSSSSSS
SSSSS-------------S-------------------------------------------S-----S-----S-----
---------------------------------------S---------------------S------------------
------------------------------------S--------S----------------------------------
------------------------------S------------------------------S------------------
-------------------------------------------------------------------------------S
--------------------------------S-------------------------------S------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------S---------------------------------------------------
-SSSS----------------------------------------------------------S--------S-------
-----------------------------S--------------------------S-----------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------SSSSSS---------------------S
-----------------S----S-----------------------------------------S--------------S
--S--------------------------------------------------------------S--------------
-----------------------------------------------S----S----------S-S--------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-----S------------
-----------------------------------------------------------------------
>forward_125
--------------------------------------------------------------------------------
------------------------CGAGGATAGATGGCCAACCTG-----------------------------------
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>reverse_2357
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------------------------------------AGCCTCTTCGTCCACAAACC------------------------
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>forward_2044
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-----------------------TGTCTTTTCTTTTTGGCGGGG------------------------------------
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>reverse_3684
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---GTACCTGCTCCCCTTGCAAT---------------------------------------------------------
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-----------------------------------------------------------------------
