>input_sequence_60580
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-------------TGCGTCGGCGTCGGC------CGGGGGACGGACGACGGGAGAGGAGAGGAGCCGGCCTGCTAGCTAG
CTAGACGC---C-GCCATGTCGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGGCGGTCGGCGTGGACGCCGC
GGCTGCAGCAGCTGGGCGGCGACGCCGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGAC
TTCGTCACCTGCCCCTACCACTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGC
CGCCTTCGCCGCCTACTGCTTCGTCGCCGCGCTGGCCTTCGCCGTGCTGGACCTCGTCCGGAGCGGC-------------
-----------GCGGCCGGCGTGAGGGGCGTCAAGAGGAAGTACCTGGTGCCGTCGGGCCCGTTCCTGCTCCCGCTGGTG
CTGCTGGCGCTGGCCAAGGGGCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTCTCCG
GCGTGCTGCACGCCAGCCTCTACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCCCGC
TTCTCCGGGGAGTGCGCGTCGTGCCTCTGCCGCATGGAGCCGCTGGTCGTCGGCGGCACGGCGATGCGGTACCGGGGCCT
GTCCAAGACGGCGCTGGCCATCATCTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCG
GCCGAGGGCGGCGCCGTGGGCGTGGCGGCCTACAGCCTGGTGGCCGGGCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTA
CAGATTCTTGGCGTGGGTGGAGTCGCGGCAGTCGCAGTGGAAGTCGAGCCTCTGCCACGCCGTCGTCTGATCGCCGTAAA
CATCTTCTTCCGTCCGTCTG----TAGAGAAAAAA---------------------------------------------
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>chr4D_1_TraesCS4D01G221900
ATCCTCATGATGCCTTTCTTTTTAGATA--ATGATCTTCATCGATGATGGCATGTAATAAGTAGTCCTGAATGATAGCAC
CATCATTTCTCTGCCGTGTAATGTAAAAAGAAAAAGAAAAGA----AAAAA----CTCTTCGAACACGAAGAAGCAGAGC
ATCCATGCCATGATACCAACTCACCTTTTATA-GCTGATGAA---------GGTCAAAAGGAAAA-AAAAA-ACTAACGT
GTGC-----ATGCAAGACGAGGTAGCTAGATGCTAAACTG--------ATCCCTAATCATGCATGCCCAATGATGCGTGT
AAACAAATGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGAACCAGCTTCATATTCTCACCAAACCACCCCCAACAAACTGCGTACTTTGACAAAAAT
CAAATCAAATACGAGCCCCCCAACAAACTTTAACTACCGCTAACAGACAG---GTACTGCAACGTACGTATTATACACCA
AATTATACAA----------------------------------------------------------------------
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----------------------------------------------------CGTACCAGATGTTTGTCTTCGTCCTCGC
TCGCCTACCAACCA------ATGCAGCAGTACAAACGAAGTCAAACAATCCTTCCCTCCATCGGCCTCGCCTACTCTCTC
CCTTTCTCTTCTGTCTTCTCCCCCGGCCCAACCACCATGACAGCAAACCATCACCGCCACATGACCGAAACGCCCCCGCC
ACAAAAGCCTCCGCTAATGATATCAGCAGCCAATAT----CTCTCTATCTTGAGAAGCTGAGATCATTTAATAATGGCGA
------GGTGCGTGCTGTTTCAAAGTTTCAGATCAGGGGCAAGCATGACAAGTTCCCTCCGAGCCTCCAGTTAAACCTTC
CCTATCCCGAT-----------TCCAACTCCCTCGTTTCTTCTACAAGCTACAACTCCAGCACACAAA------------
CATCCATCCATCCATCCA----AGGGGGAGAGAAAAAGGGTGTAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGGTGAGGA
GCTGCCTCTGAAAGCAAGCCATCATTAGGCCGCCAAATGCGGGAATGCGTATTGGCTAACAGGACAAGAAGTCGAGGACC
AAGGAGCAGGAGCTGCGTCGGCGTCGGC------CGGGGGACGGACGACGGGAGAGGAGAGGAGCCGGCCTGCTAGCTAG
CTAGACGC---C-GCCATGTCGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGGCGGTCGGCGTGGACGCCGC
GGCTGCAGCAGCTGGGCGGCGACGCCGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGAC
TTCGTCACCTGCCCCTACCACTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGC
CGCCTTCGCCGCCTACTGCTTCGTCGCCGCGCTGGCCTTCGCCGTGCTGGACCTCGTCCGGAGCGGC-------------
-----------GCGGCCGGCGTGAGGGGCGTCAAGAGGAAGTACCTGGTGCCGTCGGGCCCGTTCCTGCTCCCGCTGGTG
CTGCTGGCGCTGGCCAAGGGGCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTCTCCG
GCGTGCTGCACGCCAGCCTCTACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCCCGC
TTCTCCGGGGAGTGCGCGTCGTGCCTCTGCCGCATGGAGCCGCTGGTCGTCGGCGGCACGGCGATGCGGTACCGGGGCCT
GTCCAAGACGGCGCTGGCCATCATCTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCG
GCCGAGGGCGGCGCCGTGGGCGTGGCGGCCTACAGCCTGGTGGCCGGGCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTA
CAGATTCTTGGCGTGGGTGGAGTCGCGGCAGTCGCAGTGGAAGTCGAGCCTCTGCCACGCCGTCGTCTGATCGCCGTAAA
CATCTTCTTCCGTCCGTCTG----TAGAGAAAAAAA-GAAGAAATTAAGAGAAAGAAA-CTCCTCCTCCTCCATTTCTTA
GTTCACCCTTTGTTTGTTAATTTTGATGTACAAATTTACAGTGCATGACACAATGGGAAGAAAGGCAACAAATTCTGCAA
AAATTCCACCTGAAACAAGC----CACTCCTCTGTTTTTCTGTCGATGAATCTTCAGAAACTTGCCCCACCATTTTCCAT
GCCATCTTTTTGTCGGTCACATTGCAGTTTTTATTTTATTTTTCCAAATCAGAAAAAGAAAAGGCTGTACTGCACTTTAG
TTGGTGGTAATTTCAACCTCGCCGCATGCATTAGTGCATCGACGGTGGGTCGGA-----TCGTCGGCCGGAGTTAATAGT
GTGAGCATTTGGCAGATGGGGCCGGGTTCAGAAAAGCGGACAGGACAAACCAGCAACAACAATGTCGTCTGTTCGCTTGT
TCTGGGGCCTTTGCCATGGTGATCGGGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTTCTTGGAGGCTTCCTGC
GATCTCTGACAGTTGTTGCCTTGATGAGTTCTCTCTGTTGTCATCATCAGTTAATAGTCCTTGTTCGGTTTGAGAGCAAG
TGGTTGGAGCGTTGGATCACCTGCTGTCTCACCCAGTTGGGAATGATCCCAAAATTTGCCGCACCCGGGCGCGGAGTCGC
CGAGGACTGCAGTTTATCAAAGAATTGGTCATGACCCGTGAGAGAAAAAATAGCTCATTGACTGAAAAAAATGACAGTAA
ATGTAGTACTACTACTTGTCACATAGTATGTGGCCCTATGCATATAGTCTCCGTGAAACAGAGTGTTTGACTTGGTTGCA
TATACTCCATTTCTTCTTCGAATCTTGGCCTTCTTTGTTGAACAAGTTCCTTTCACTCTCATCATCATCGTGCGATTGCT
GGAAAGAAAAGGCCAGTTGCAT----------------------------------------------------------
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---------------------CATGCAGATGCGGCCATCCTTCCT---TCCTCTGGTCT---GGATGATTTGGTAGGGGC
GATCGGGCCGG
>chr4B_1
ATCCTCATGATGCCTTTCTTTTTAGATACAATGATCCTGGTCGATGATGCCATGGAGC-------CCTGAATGATAGCAC
CATCATTTCTCTGCCGTGTAACGTAA----AAAAAGAAAAGAAAAGAAAAA----CTCTTCGAACACGAAGAAGCAGAGC
ATCCATACCATGATACCAACTCACCTTTTATAAGCTGATGAA---------GGTCAAAAAGAAAAGAAAAA-ACTAACGT
GTGCATGCAATGCAAGACGAGGTAGCTAGATGCTAAATCG--------ATCGCTAATCATGCATGCCCAATGATGCATGT
AAACTAATA-----------------------------------------------------------------------
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-------------TGCTGAATGAGCCAGCCCCATATTCTCACCAAACA--CCCCAACAAACTGCGTACTTTGAAGAAAAT
CAAATACGAT-CGAG-CCCCCAACAAACTTTAACTACCGCTAACAGACAG---GTACTGCAACG-------TATACACCA
AATTATACAA----------------------------------------------------------------------
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----------------------------------------------------CGTACCAGATGTTTGTCTCCGTCCTCGC
TCGCCTACCAACCATTACCAATGCAGCAGTACAAACAAAGTCAAACAATCCTTCCCTCCATCGGCCTCGCCTACTCTCTC
CCTTTCTCTTCTGTCTTCTCCCCCGACCCAACCACCATGACAGCAAACCATCACCGCCACATGACCCAAACGCCCCCGCC
ACAAAAGCCTCTGCTAATGATATCAGCAGCCAATAT----CTCTCTATCTTGACAAGCTGATATCATTTAATAATGGCGA
------GGTGCGTGCTGTTTCAAAGTTTCAGATCAGGGGCAAGCATGGCAAGTTCCCTCGGAGCCTCCAGTTAAACCTTC
CCTATCC-GAATTTTTCCAAGCTCCAACTCCCTCCTTTCTTCTACAAGCAACAACTCCAGCACACCAGCATCCATCCATC
CATCCATCCATCCATCCA----AAGGGGGGAGAAAAGGGGTGTAA------------GAGGAGGAGGAAGAGGGCGAGGA
GCTGCCTCTGAAAGCAAGCCATCATTAGGCCGCCAAATGCGGGAATGCGTATTGGCTAACAGGACAACAAGTCGAGGACC
AAGGAGCAGGAGCTGCGTCGGCGTCGGC------CGGGGGACGGACGACGAGAGAGGAGTGGAGCCGGCCTGCTAGCTAG
CTTGCCGCGGAC-GCCATGTCGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGCCGGTCGGCGTGGACGCCGC
GGCTGCAGCAGCTGGGCGGCGACGCGGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGAC
TTCGTCACCTGCCCCTACCACTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGC
CGCCTTCGCCGCCTACTGCTTCGTCGCCGCGCTGGCCTTCGCCGTGCTCGACCTCGTTCGCAGCGGC-------------
-----------GCGGCCGGCGTGAGGGGCGTCAAGAGGAAGTACCTGGTCCCCTCGGGCCCGTTCCTGCTCCCGCTGGTG
CTGCTGGCGCTGGCCAAGGGGCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTGTCCG
GCGTGCTGCACGCCAGCCTCTACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCGC
TTCTCCGGGGAGTGCGCGTCGTGCCTCTGCCGCATGGAGCCGCTGGTGGTGGGCGGCACGGCGATGCGGTACCGGGGCCT
GTCCAAGACGGCGCTGGCCATCATCTTCGCGCTGTGCTCCAGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCG
GCCGAGGGCGGCGCCGTCGGGGTGGCGGCCTACAGCCTGGTGGCCGGCCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTA
CAGATTCTTGGCGTGCGTGGAGTCGCGGCAGTCGCAGTGGAAATCGAGCCTCTGCCACACCGTCGTCTGATCACCGTAAA
-ATCTTCTTCCGTCCGTCTG----TAGAGAAAAAAAAGAAGAAATTAAGAGAAAGAAA-CTCCTCCTCCTCCATTTCTTA
GTTCACCCTTTGTTTGTTAATTTTGATGTACAAATTTACAGTGCATGACACAATGGGCAGGCAAAAG---AATTCTGCAA
AATTTCCCCCTG----AAGC----CATTCCTCTGTTTTTCTGTCGATGAATCTTCAGAAATCTG-CCCAACATTTTCCAT
---ATCTTTCTGTCGGTCACATTGCATTTTTTTTTCCGAATCAGG---------AAAGAAAAGGCTGTACTGCACTTTAG
TTGGTGGTAATTTCAACTTCGCCGCATGCATTAGTGCATCGACGGTGG-----A-----TCGTCGGCCGGAGTTAATAGT
GTGAGCATTTGGCAGATGGGGCCGGGTTCAGAAAAGCGAAGAGTACAAACCAGCAACAACAATGTCGCTTGTTGGCTTGT
TCAGGGGCCTTTGTCATGGTGATCGGGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTTCTTGGAGGCTTCCTGC
GATATCTGACAGTTGTTCCACT--TGAGTTCTCTCTGTTGTCATCATCAGTTAATAATCCTTGTTTGGTTTGAGAGCAAG
TGGTTGGAGCAT----TCACCTGGTGTCTCACCCAGTTGGGAATGAACCCAAATTTTGCCGCACCCGGCCGCGGAGTCAC
CGAGGACTGCAGTTTAACAAAGAATTGGTCATGGCTCGTGAGAGAAAAAATAGCTCATTGACTGAAAAA-ATGACAGTAA
ATGTA----TACTCCTTGTCACATAGTATGTGGCCCTATGCATATAGTCTCTATGAAACAAAGTGTTTGACTTGGTTGCA
TATACTCCAT---TTCTTCGAATCTTGGCCTTCTTTCTTGAACAAGTTCCTTTCACTCTCATCATCATCGTGCGA-----
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>chr4A_1
ATCCTCATGATGCCTTTCTTTTTAGATACAATGATCCTGATCGATGATGCCATGGAGC-------CCTGAATGATAGCAC
CATCATTTCTCTGCCGTGTAATGTAA----AAAAAGAAAAGAAAAGAAAAAAAAACTCTTCTAACACGAAGAAGCAGAGC
ATCCATACCATGATACCAACTCACCTTTTATAAGCTGATGAACAACTACAAGGTCAAAAAGAAAAAAAAAACACTAACGT
GTGC-----ATGCAAGACGAAGTAGCTAGCTAGATGCTGAATCGATCCATCGCTAATCATGCATGCCCAATGATGCATGT
AAACTACTCCCTCCGTTTTTAAATATTTATCTTTCTAAAGATTTTAACAAATAACTACATACAAAACAAAATGAGTGAAT
TTACACTTTAAAATATGTTTATATACATCCGTATGTGATAGTCTATTTTAAATCTTTAAAAAGATAAATATTTAGTAACG
GAGGGACTAGTATTGCTGAACCAGCCAGCCCCATATTCTCACCAAACA--CCCCAACAAACTGCGTACTTTGACAAAACT
CAAACCAAATACGAG-CCCCCAACAAACTTGAACTACCGCTAACAGACAGCTGGTACTGCAACG-------TGTACACCA
AATTATACAATCGTATGGTGCTAGTACTGCTTATTACTACTGACCCGGGAGACCCCCGCCCGACCCCCGTGTCGCCTAGC
TCTGGCGACACGGGGGTAGAAACCCTAGCGCCGCCACAGTCCCCGCCCCCTCCCCCACCTCTCTCGTCGTCGCCAGAGGG
CGCCCGCCGGCGAAGCCCGGGCCGGCCCCGAGGAAGGCGGCGGCGGGGCGCTATCCCTGTCTAGTCTGGCGCGTCGAGAG
GGGTTGCATCTGCGCGTCCATCGAGATCCGCCGGCGCTTGCTGGAGCCTGGGATCTGTGGTTGCGCGCCCGGATCCGCGC
GTTTCGCGTCCGTGGCTGCGCGGTGGAGGCGCCTGGCTACGTGCTTGTCCAACGCCCGCGCGCCCTTGGCTGCGTGTCGA
TGGGGTTGGGCGCGGTCACTGCTGCGGGGATGCCCAGGGGCAGCGCGGACGTGCGCGTCGTCGTCGCAGGGTGATGCTGG
GGGACGCGGGCTCCCCTAGCTGGTGGCCTCTGGCCTGAGCGGCCGGATCTGACGGGCCCTATAGGTCAGATCTGGCGCTA
TGGCGGCCGGAGGTGGCTCGGACGGCGACTGACTCCAAGCGGACTGTGGTAGCTCCATGTCGGGATGGTGGTCTGGGGTG
GCGTGGTCTGGGCTGTGCCTTCGGGACGCTCTAGGCTTGTGTCGCCGGCAGTGCTCCGGCTAGTTTTGTGCGGTGCAGCA
AGTGGCGCAGCTCCGGTTTGGTGGTGGTGTGTTTGCGAAGTCGTCGCAGCATAGGTGCTCGGTTTCCCTGACGAAAGTCA
TGCTCGACTCTGGTTTGAGCTGATGGCAAATGACGCCTTCGGGTGTGATTTCCCTTGTTGGAGGTGCCATCAAGGGGGTC
CGACACCTCTCCCTGCTCCGTGTTCTTGTCTCCCGGTGAAAACCGTGTGCAATGGTGGCGTCTTTGGCGTCATTACTTTG
TTGGAAGCATTGCCTTGGAGTCAAGTCTGGTGTTGGAAGCATCTGGTTGGTGGTGGTGTGGTGGATCTGGAGCGGGCAGC
GTCTTGGTGAGCATGGAGCATTGGTGGTGCGTCCGTTTGGAGTGGATCGTCGGTCGACGGTGAGAGGAGCAAGAGCACCC
TTTGTATGCAAGTAGCGCCAGGCGAGCTATGTCAGCTAGCCTCGTGGGATCGGAGCGGCATATGTCTCGCTCTTTCGGAT
GTATCGTTCCTCTCCGGTGTCCTCGATGTTTGCGGATATGCTCGTAGCAGCCCGGTACAATACGACGGTTGTCGGTGTGC
ACTCTGGTAGCAGCGTAGGCGCTCGAGTGCCCGCCCGGTGTGTTGTGGGGTTTTGGCTTTCCGGCGTTTTTGTATATGTT
GTGGTGCTTTAGTCTTAGTTTATCTAGGCGCTGCTTTGGTTTTAGCCCGGTTTCTCTCAATTAACTGAGCAGCCCTATTT
TCCTTTTTTTTAGCACTTGCCTTTATGCGATGCATTCCTCCTTTGGGGGTGTTCTTGTAATACCTTCTTCTGATCAACGA
ATTTGGCAGCTTGCCAACATTTAAAAAAAATAAAATTATACAATCGTACTTACGTACCAGATGTCTGTCTTCGTCCTCGC
TCGCCTACCAACCA------ATGCAGCAGTACAAACGAAGTCAAACAATCCTTCCCTCCATCAGCCTCGCCTACTCT--C
CCTTTCTCTTCTCTCTTCTCCCCCGGCCCAACCACCATGACAGCAAACCATCGCCGCCACATGACCAAAACGCCCCCGCC
ACAAAAGCCTCCGCTAATGATATCAGCAGCCCATATATCTCTCTCTATCTTGAGAACCCAGGATCATTTAATAATGGCGA
TGGCGAGGTGCGTGCCGTTTCAAAGTTTCAGATCAGGGGCAGGCATGTCAAGTTCCCCCCGAGCCTCCAGTTAAACCTTC
CCTATCC-GAT-----------TCCAACTCCCTCATTTCT---------TACAACTCCAGCACACAAA------------
AATCCATCCATCCATCCACCCAAGGAGGAGAGAAAAAGAGTGTAGGAGGAGGAGGAGG----------------------
--TGCCTCTGAAAGCAAGCCATCATTCGGCCACCAAATGCGGGAATGCGTATCGGCTAACAGGACAAGAGGCCGAGCACC
AAGGAGCAGGAGCTGCGTCGGCGTCGGCGTCGGCCGGGGGACGGACGCCGAGAGAGCA----------------AGCTAG
GTAGACGC---CGGCCATGTCGTATGATCAGATGCTGTCGCCGCTGCTGGGAGGCGCCGGGCGGTCGGCGTGGACGCCGC
GGCTGCAGCAGCTGGGCGGCGATGCGGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGAC
TTCGTCACCTGCCCCTACCACTACTACTGCGACAGCTCCTACCCGGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGC
CGCCTTCGCGGCCTACTGCTTCGTCGCCGCGCTGGCCTTCGCCGTGCTCGACCTCGTCCGGAGCGGC-------------
-----------GCCGCTGGCGTGAGGGGCGTCAAGCGGAAGTACCTGGTCCCCTCGGGCCCGTTCCTGCTCCCGCTGGTG
CTGCTGGCGCTGGCCAAGGGGCAGCGCGTCAACGCCGTGTTCCCGCTGGCCCAGCTCGGCCCGGCATTGCTGCTGCTGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTCTCCG
GCGTGCTGCACGCCAGCCTCTACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGCTGGTCGCGC
TTCTCCGGGGAGTGCGCGTCCTGCCTCTGCCGCATGGAGCCGCTGGTCGTCGGCGGCACGGCGATGCGGTACCGGGGCCT
GTCCAAGACGGCGCTGGCCATCATCTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTTGAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCCGTGTACCTCGTCGGCTGGGTGGCG
GCGGAGGGCGGCGCCGTGGGCGTGGCGGCATACAGCCTGGTGGCCGGGCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTA
CAGATTCTTGGCGTGGGTGGAGTCGTGGCAGTCGCAGTGGAAATCCAGCCTCTGCCACGCCGTCGTCTGATCGCCGTAAA
-ATCTTCTCCCGTCCGTCTGTATGTAGAGAAAAAAAACAAGAAATTAAGAGAAACAAATCTCCTCCTCCTCCATTTCTTA
GTTCACCTTTTGTTTCTTCATTTTGATGTACAAATTTACAATGCATGACACAATGGGAAGAAAGGCAAGAAATTCTGCAA
AAATTTCCCCTG----AAGCAAGCCACTCCTCTGT---------------------------------------------
------TTTCTGTCGGTCACATTGCAGTTTTTTG-TTATTTTTCGAAATCAGAAAAAGAAAAGGCTGTGCTGCGCTTTAG
TTGGTGGTAATTTCAACCTCGCCGCACGCATTAGTGCGTCGACGGTGG-----ATCGGCTCGTCGGCCGGAGTTAATAGC
GTGAGCATTCGGCAGATGGGGCCGGGTTCAGAAAAGCGAAGAGGACAAGCCAGCAGCAACAATGTCGCCTGCTGGCTTGT
TCAGGGGGCTTGTCCGTGGCGATCGGGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTGCTTGGAGGCTTCCTGC
GATCTCTGACACTTGTTCCACTC--GAGCTCTCTCTCTTGTCATCATCAGTTAATAA----------GTTTGAGAGCAAG
TGGT-----------------------CTCACCCAGTTGGGAATGAACCCAAAATTTGCCGCACCCGCCCGCGGAGTCAC
CGAGGACTGCTGTTTATCACAGTAGAGAATTTGTCAATGGGTGGA-------------------AATAAAATGACAGTAA
ATGTAGTGCTACTGCTTGTCACATAGTATGTGGCCATATGCATATAGTCTCCGTGAACCAGAGCGTTTGACCTGGCTGCG
TACACTCCATATTTTCTTCGAATCTC---------TCTTGAGCAAGTTCCTTTCACCCTCATCATCACCGTGCGATTGCT
GGGAAGAAAAGGCCAGTTGCATTCATAATTTTAAATAGCCGGCTAAGCTCCACTATAACTGTTTGAGGGTGTTGCCGCTA
AATGATTTCATGTACAATTTGCCGCTATAGTTCAAAAATAGCTGTTTTTAAGGGTCGCCGCTAAATGCCATAGCCCACTA
TTTAAAACATTGGTTGCATTGCATGCGGATGCGGCCATCCTTCCTCCTTCCTCTGGTCTGGAGGATGATTTGGTAGGGGC
GATCGGGCCGG
>chr4D_1167
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-----------------------------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGAC
CTCATCACCTGCCCTTACCACTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGCCCTCGTCGC
CGTTTTAGCCCTTTATTGCCTCCTGTCCGCGGCGGCCTTCACGGTGGTAGAGATCGTCAGGGCTGGCGGCGGCAGCC---
CGGCGACGGCGGGCGGTGGCGTCTGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCTTGATGCCGCTGGTG
CTGCTGGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTCTTCCCGCTCGCGCGGCTCGGCCCGGCATTGCTGCTCACGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGCGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCG
GGATCCTGCACGCGAGCCTGTACCTGGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGG
TTCTCCGGCAAGTGCGCCACCTGCCTCTGCCGGATGGAGCCTCTGGTGGTGGGCGGCCGGACGGTGCTCTACCGGGGCCT
GTCCAAGACAGCGCTGGCCATCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGTCGCGGGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGCTGGGTGATT
GCAGAGGGTGCCATGGCGAGCGCGGTCGTGTACGGGCTCGTCGCCGGGCTGGTGTTCTTGTGTGTATTTGGGAAGGTTTA
CAGATTCTTGGCGTTGGTGGAG----------------------------------------------------------
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>chr4B_1167
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-----------------------------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGAC
CTCATCACCTGCCCTTACCACTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGTCCTCGTCGC
CGTTTTAGCCGTTTATTGCCTCCTGTCCGCGGCGGCCTTCACCGTGGTAGAGATCGTCAGGGCTGGCGGCGGCAGCC---
CGGCGACGGCGGCCGGTGGCGTCGGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCTTGATGCCGCTGGTG
CTGCTGGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTCTTCCCGCTCGCGCGGCTCGGCCCGGCATTGCTGCTCACGCT
GCAGGCATCGGCGCTGGCGTTCCGAAACGAGGCCGACGGCGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCG
GGATCCTGCACGCGAGTCTGTACCTCGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGG
TTCTCCGGCAAGTGCGCCACCTGCCTCTGCCGAATGGAGCCTCTGGTCGTGGGCGGCCGGACGGTGCTCTACCGGGGTCT
GTCCAAGACAGCGCTGGCCATCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGTCGCGAGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGTTGGGTGATT
GCCGAGGGTGCCATGGCGAGCGCGGTCGTGTACGGACTCGTCGCCTGGCTGGTGTTCCTGTGTGTGTTTGGGAAGGTTTA
CAGATTCTTGGCGTGGGTGGAG----------------------------------------------------------
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>chr4A_1167
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-----------------------------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGAC
CTCATCACCTGCCCTTACCACTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGTCCTCGTCGC
CGTTTTGGCCCTTTACTGCCTCCTGTCCGCGGCGGCCTTCACCGTGGTAGAGATCGTCAGGGCTGGCGGCGGCGGTGGCT
CGGCGACGGCGGCCGGTGGCGTCGGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCATGATGCCGCTGGTG
CTGCTGGTGCTCGCCAAGGGGCAGCGGATCAACGCCGTCTTCCCGCTTTCGCGGCTCGGCCCGGCATTGCTGCTCACGCT
GCAGGCGTCGGCGCTGGCGTTCCGGAACGAGGCCGACGGGGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCG
GGATCCTGCACGCGAGCCTCTACCTGGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGG
TTCTCCGGCAAGTGCGCCACCTGCCTCTGCCGGATGGAGCCGCTGCTCGTGGGCGGCCGGACGGTGCTCTACCGGGGCTT
GTCCAAGACAGCGCTGGCCGTCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCG
CGTGGACGCGGTCGGCGCTGGAGGCCGCGGGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGCTGGGTGATT
GCCGAGGGCGCCATGGCGAGCGCGGTCGTGTACGGGCTCGTCGCCGGGCTGGTGTTCTTGTGTGTATTTGGGAAGGTTTA
CAGATTCTTGGCGTGGGTGGAG----------------------------------------------------------
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>SNPs
------------------------------------S-S----------S----S-SSSSSSSSS---------------
--------------------------SSSS--------------------------------------------------
------S----------------------------------------------------S--------------------
-------------------------------------SS------------S------------------------S---
----S---S-----------------------------------------------------------------------
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-----------------------S-----SS----------------SSS------------------------------
---------------S------------------------------------------------SSSSSSS---------
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------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------S--------------------------S---------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------S--------S--------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------S----SSSS--------------------------------------------SS--S----S----------
SSS------S----------------------S-----------S-----------------------------------
------------------------------------------------SSSSS---------------------------
--------------------------------------S-S--------------------------S-----S------
--S-----------------------------------------------------------------------------
-----------------S-SS-SS--------------------------------S--------S--------------
----------S-SSSS-------S----------------------S---------------------S---------S-
---------------------------------S-S--------------------------------------------
-------S-----S------------------------------------------------------------------
----------S-S-----------------------S-------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-----------
>forward_2528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CAGATCAGGGGCAAGCATGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_4574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGATCACCTGCTGTCTCACC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
