>input_sequence_60578
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-------------------------------------------------------------ATGCTATGGGCAGCGCGCC
TGTCCGGCTTCTTCTCCGCCGCCATGCTGATGGTGGTCCTCTCGCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATC
CGGTCGTCGCAGTTCGACAGCCACGTCCGCTTCCCCGGCCAGATCGCCGGGGGGGCCAGGGGCCTCCCCTTCCGCCGCGC
GCCGTCCTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAGCAATGTCTGCGACCCCTCGCTCGTCCACATCGCCA
TTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCCGTCCATTCCGTGGTCCAGCACGCCATGTGCCCGGAGAGC
GTCTTCTTCCACTTCCTCGTCTCCGACCCCAGCCTGGGCGACCTCGTCCGCGCCGTCTTCCCGCAGCTCCGGTTCAAAGT
CTACTACTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCGCCAGGCGCTGGAGGAGCCGCTCAACTACG
CCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCTACCTCGACTCCGACCTCGTGCTCGTCGAC
GACGTGGCCAAGCTCTGGCGCACCGACCT---------CGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCCAA
CTTCACCAAGTACTTCACCGACCGGTTCTGGTCGGAGGAGCAGTTCGCCGGGACGTTCGAGGGC---------------A
GGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGCTGGACCTGGCGCGGTGGCGGCGCGCGGGCTACACCCGGCTTATC
GAGCGGTGGATGGAGATACAGAAGTCGGCGCCCGGGCGCATCTACGAGCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGTT
CGCGGGGCACGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTGGGCGGCGACAACATCCTGGGCAGCTGCCGCG
ACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAGCCGTGGGCGCGGCTGGGCGGCGGGCGGCCG
TGCCCGCTGGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGCCGTGGAGCCGTCCCGGTAA-----------
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--------
>chr4A_1_TraesCS4A01G117000
CAAGTCTCAGTTGACTGAGACTTCGTTATGTCTCAGTCGATACTATCTTCCTTTGATTTTGCATGGATATTCATGCAAAA
AAAAGTTATTTTCGTTTTTTTCTCTTCTTCTTATATACTATATCGTTTGAGTGAGACCTAGCCGCACTCTAACAAATTTG
CAAAACAGCGCAGAAATGTGGCATGAAATACAAAATCTGGTTCGGAAAACAATTATAATCTGAAAAAGCAAGTGGGAGTA
GTGGTAAAATTGAGCAAAGTGATTCGTGAGCTGAGCCGCTGCCGCTGACCCAAGCGAGCTGCCTCCCGTCCTCTCCGGAC
ACGGCTCCTCTGCCGTGCGCTAGGTGACGTTGGGTCGCTGACATGTGGGCCAGATTTCCCACAGACCCACATGTCAGTGG
TAGAACGGCAGGCTGCCGAACGGTAGAGGATCCTCGCGCGTCCTCTCCTCCCCACGGAGCCGCTCTTCTCAAAGGCGGGA
GGAAAAGAGGGCACGGCGAGAGAGATAACCCCCCGAATCCCCAAAATCAGAGAGCGCACAAGTAATAAAACCGAAGCGGC
AGATACAATAAGCCGCCGCCACCACGCCACCGCCGCTGCAGAAAAAGGCAAGCAGTCGCACGGGGGAA-----TCGCCTC
GCCTGTGGCCGCGGTGGGTTGGTGGGTGCGGGGTGCCGTCGCCTCCTATTCTCAAGTCTCAACCCCACTCC-------CC
ATTACCACGCTTCGCCTGGATGCCCTCTCGCTTCTCCCCCACTCCACGCGCCGATCCGCCAGCCAAGAAACCACGAGGCG
ATCCAGTTGAGGAGGAGGAGGACGAGGAAGGAGGAGGAGGCGAGGTATCCGCGCTGACTCTGCCGCGAGCTGCCCCCTTT
TA---------GCCCCCAGCCCTGGCCACGCTGCCGCTGGACGACGCCATCGCCCACCTGCACGCCGTCTTGGGGTGGTC
GACCAGCAGCCGTGGCCGGCCCGGCGCCAGCAAGCGGTGGCAGCGCACTAGGCGGAGCGCGATGCTATGGGCAGCGCGCC
TGTCCGGCTTCTTCTCCGCCGCCATGCTGATGGTGGTCCTCTCGCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATC
CGGTCGTCGCAGTTCGACAGCCACGTCCGCTTCCCCGGCCAGATCGCCGGGGGGGCCAGGGGCCTCCCCTTCCGCCGCGC
GCCGTCCTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAGCAATGTCTGCGACCCCTCGCTCGTCCACATCGCCA
TTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCCGTCCATTCCGTGGTCCAGCACGCCATGTGCCCGGAGAGC
GTCTTCTTCCACTTCCTCGTCTCCGACCCCAGCCTGGGCGACCTCGTCCGCGCCGTCTTCCCGCAGCTCCGGTTCAAAGT
CTACTACTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCGCCAGGCGCTGGAGGAGCCGCTCAACTACG
CCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCTACCTCGACTCCGACCTCGTGCTCGTCGAC
GACGTGGCCAAGCTCTGGCGCACCGACCT---------CGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCCAA
CTTCACCAAGTACTTCACCGACCGGTTCTGGTCGGAGGAGCAGTTCGCCGGGACGTTCGAGGGC---------------A
GGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGCTGGACCTGGCGCGGTGGCGGCGCGCGGGCTACACCCGGCTTATC
GAGCGGTGGATGGAGATACAGAAGTCGGCGCCCGGGCGCATCTACGAGCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGTT
CGCGGGGCACGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTGGGCGGCGACAACATCCTGGGCAGCTGCCGCG
ACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAGCCGTGGGCGCGGCTGGGCGGCGGGCGGCCG
TGCCCGCTGGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGCCGTGGAGCCGTCCCGGTAACCAACCAACCG
CAAACAAC--ACTACTACTACAAAGATTCTTTTCCTTCTTTCGCCGACCCGTATAAATCCTGAGCTCTAATTCTTGGTCA
CCGTTACATGTTCAAAAACCTATATATTTTTTCTCCT------------CCTTCCCGTTCTCTTTCAATTTCTTCTTCTG
TTGAATTAAATGTTTTGTGCCACTCCTAGATTGTTCGTGTTC-------------GTCCCACATATTTTTGGTCGTTTGT
TTGGTGCTACAAAAAAGGTCATTTGTATCATACTACCATACACTCTACAGAGCTGCAGCCTCATCATGGCATCATGGTGA
TGGTGATGATGATGATGATATAAATAAATAAATAAATAAAAGCAGAGGGAGGGAGGGAGAGAAACAGACTTTGCA--CAT
TTGTTGTTCGTCTTCCCCTTAAATGGCAATAGTAT-CTCACTCCCTGCTGTTTGGTTTGGTGGCTTGGTCTGTTGTA---
CTGGTGCTCT---GGCAAACGGTGGCAATCAATCAATTGAATTCGCACATCCATCCCCCTGAAGGGTCAGCCGGTCCAAT
GCAACACCTGCACAAGCCTTAACGCTGCTGGCAGAAGAGAAGTGTCCTACCACTCCTACTCCATGGACCGGTTCATTGGG
AGGGATGGCT----CATGTCGAAATCGCTGGCAGACATGAGTAACTTGGAATCCTCCCTTTGTGGCTCGTGCACTACGGC
GGCTGACACCAACAACCATTTCGAGCCTGAGCACTCGCGATCTGCCGATGGATTCATCATCAGTTAATTATAGGGAGAGC
GTTTCCGTTAAGCTCCCGACCCGACGACTGAAAGATGATGGATGGG-------------CGGGCGGTGCGGGGGGAGGAC
GTGGAGGGTTGCAGCGG--GCGAGCAACACGGGACTTGTGAGCTACCGCGCGCCCGTCTCCTC----CTTTTCGAGGGCC
CTTTCCGGTGGGGCCTCACTCGCCACTTGCTGGGCTCGCCGCTTTATTCTTTCTTTTGCAAATCATTATTGTGCTTTCCC
TCTCCGTT
>chr4D_48
-----------------------------------------------TTCCTTTGATTTTGCATGGAGATTAATGCAAAA
AAGTTCTTTTTAGTTTTTCTTTT-TTCTTCTTATATGCTATATTGCTTGAATGAGACCTAGCCACACCCTAACAAATTTG
CAAAACAGTACAGAAATGTCGCATGAAATACAAAATCTGGTTCGGAAAACAATTATATTTTTAAA---CAAGTGGAAGCA
GTGGTAAAATTGAGCAAAGTGATTCGTGAGCTGAGCCGCTGC-----------------TGCCTCCCGTCCTCTCCTCTC
TCCCACGCCGCTC-------------------------------------------------------------------
----------------------------------------------------------------CTTCTCAAAGGCGGGA
GGAAAAGAGGGCACGGCGAGAGAGATAAACCCCCGAATCCCCAAAATCAGAGCGCAG--GGGTAATAAAACCGAAGCGGC
AGATACAATAAGCCGCCGCCACCACGCCACCGCCGCTGCAGAAAAAGCCGAGCAGTCGCACGGGGGAA-----TCGCCTC
GCCTGTGGCCGCGGTGGGTTGGTGGGTGC-------CGTCGCCTCCTAT-------TCTCAACCCCACTCTCCAATCTCC
ATTACCACGCCTCGCCTGGATGCCCTCTCGCTTCTCCCCCACTCCACGCGCCGATCCGCCAGCCAAGAAACCACGAGGCG
ATCCAGTTGAGGAGGAGGAG------GAAGGAGGAGGAGGCGAGGTATCCGCGCTGACTCTGCCGCAAGCTGCCCCCTTT
TATCGCTCCTAGCCACCAGCCCTGGCCACGCTGCCGCTGGACGACGCCATCGCCCACCTGCACGCCGTCTTGGGGTGGTC
GACCAGCAACCGTGGCCGGCCCGGCGCCAGGAAGCGGTGGCAACGCACTCGGCGGAGCGCGATGCTATGGGCAGCGCGCC
TGTCCGGCTTCCTCTCCGCCGCCATGCTCATGGTGGTCTTGTCGCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATC
CGGTCGTCGCAGTTCGACAGCCACGTCCGCTTCCCCGGCCAGATCGCCGGGGGCGCGAGGGGCCTCCCCTTCCGCCGCGC
GCCGTCCTTCCGCAATGCCGCTGACTGCGGCAACGCCACCG---GCAATGTCTGCGACCCCTCGCTCGTCCACATCGCGA
TTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCGGTCCATTCCGTGGTCCAGCACGCCATGTGCCCGGAGAGC
GTCTTCTTCCACTTCCTCGTCTCCGACCCGAGCCTGGGCGACCTCGTCCGCGCCGTCTTCCCGCAGCTCCGGTTCAAAGT
CTACTACTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCGGCAGGCGCTGGAGGAGCCGCTCAACTACG
CCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCTACCTGGACTCCGACCTCGTGCTCGTCGAC
GACGTGGCCAAGCTCTGGCGCACCGACCT---------CGGCGGCCGCACCGTGGGCGCGCCGGAGTACTGCCACGCCAA
CTTCACCAAGTACTTCACCGACCGGTTCTGGTCGGAGGAGCAGTTCGCCGGGACGTTCGAGGGC---------------A
GGCGGCCGTGCTACTTCAACACCGGCGTGATGGTGCTCGACCTGGCGCGGTGGCGGCGCGCGGGCTACACCCGGCGCATC
GAGCGGTGGATGGAGATACAGAAGTCGCCGCCTGGGCGCATCTACGAGCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGTT
CGCGGGGCAGGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTGGGCGGCGACAACATCCTGGGCAGCTGCCGCG
ACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAGCCGTGGGCGCGGCTGGGCGGCGGGCGGCCG
TGCCCGCTGGACGCGCTCTGGGCGCCCTTCGACCTGTACGGCCCGGCCGCCGTGGAGCCGTCCCGGTAACCAACCGCCCG
CAAACAGACTACTACTACTACAAAGATTCTTTTCCTTCTTTCGCCGACCCGTATAAATCCTGAGCTCTAATTCTTGGTCA
CCGTTACATGTTCAAAAACCTATATATTTTTTCTCCTTCTTCTTCTCCTCCTTCCCGTTCTCTTTTAATTTCTTCTTCTG
TTGAATTAAATGTTTTGTGCCACTCCTAGATTGTTCGTGTTGGTAGCGGTCTGTTGTCCCACATATTTTTGATCCTTTGT
TTGGTGCTACAAAAAAGGTCATCTGTATCATACTC---TACACTCTACAGAGCTGCAGCCCCATCATCACATCATGGT--
----------GATGATATAATAAATAA--------ATAAAAGCAGAGGGAGGGAGGGAGAGAAACAGACTTTGCAAGCAT
TTGTTGTTCGTCTTCCCCTTAAATGGCAATATCTCCCTCACTCTCTGCT-----GTTTGGTGGCTTGGTCTGTTGTA---
TTGGTGCTCTGCAGGCAAACGGTGGCAATCAATCAATTCAATTCGCACATCCATCCCCCTGAAGGGTCAGCCGGTCCAAT
GCAACACCTGCACAAGCCTTAACGCTGCTGGCAGAAGAG---TGTCCTACCACTCCTACTCCATGGACCGGTTCCTTGGG
A----TGGAT----CATGTCGAAATCGCTGGCAGACATGAGTAACTTGGAATCCTCCCTTTGTGGCTCGTGCACTACGGT
GGCTGACACCAACAACCATTTTGAGCTTAAGCACTCGCCATCTGCCGATAGATTCATCATCAGTTAATTATAGGGAGAGC
GTTTCCGTTAAGCTCCCGACCCGACGACTGAAAGATGATGGATGGGGAAGGGAGATGGGCGGGCGGTGC--GGGGAGGAC
GTGGAGGCCCTGGGTTGCAGCGACCAACACGGGACTTGTGAGCTACCGCCCGT-------CTCTCTCCTTTTCGAGGG--
------------------CTCGCCACTTGCTGGGCTCGCCGCTTTATTCTTTCTTTTGCAAATCATTATTGTGCTCTTCC
TCTCCGTT
>chr4B_150
--------------------------------------------------------------------------------
---------------------------------------------------------------------TAACAAATTTG
CAAAACAGCGCAGAAATGTTGCATGAAATACAAAATCTGGTTGGGAAAACAATTATAATCTGAAA---CAAGTGGGAGCA
GTGGTAAGATTGAGCAAAGTGATTCGTGAGTTGAGCCGCTGCCGCTCA------CGAGCTGCCTCTTGTCCTCTCCTC-C
TCCCACGCCGCTC-------------------------------------------------------------------
----------------------------------------------------------------CTTCTCAAAGCCGGGA
GGGAAAGACGGCACGGC--------------------------------GAGCGCAG--AAGTAATAAAACCGAAGCGGC
AGATACAATAAGCCGCCGCCACCACGCCACCGCCGCTGCAGAAAAAGCCGAGCAGTCGCACGGGGGAA-----TCGCCTC
GCCTGTGGCCGCGGTGGGTTGGTGGGTGC-------CGTCGGCTCCTAT-------TCTCAACCCCACTCC-------CC
ATTACCACGCCTCGCCTGGATGCCCTCTCGCTTCTCCCCCACTCCACGCGCCGATCCGCCAGCCAAGAAACCACGAGGCG
ATCCAGTTGAGGAGGAGGAG------GAAGGAGGAGGAGGCGAGGTATCCGCGCTGACTCTGCCGCAAGCTGCCCCCTTT
TATCGCTCCTAGCCACCAGCCCTGGCCACGCTGCCGCTGGACGACGCCATCGCCCACCTGCACGCCGTCTTGGGGTGGTC
CAACAGCAGCCGTGGCCGGCCCGGCGCCAGCAAGCGGTGGCAACGCACTCGGCGGAGCGCGATGCTATGGGCAGCGCGCC
TGTCCGGCTTCTTCTCCGCCGCCATGCTGATGGTGGTCCTGTCGCCGTCGCTGCAGTCCTTCCCGCCCGCCGAAGCCATC
CGGTCGTCGCAGTTCGACAGCCACGTCCGCTTCCCCGGCCAGATCGCCGGGGGCGCGAGGGGCCTCCCCTTCCGCCGCGC
GCCGTCCTTCCGCAATGCCGCTGACTGCGGCAACGCCACCG---GCAATGTCTGCGACCCCTCGCTCGTCCACATCGCGA
TTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCGGTCCATTCCGTGGTTCAGCACGCCATGTGCCCGGAGAGC
GTCTTCTTCCACTTCCTCGTCTCTGACCCGAGCCTGGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCGGTTCAAAGT
CTACTTCTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCGGCAGGCGCTGGAGGAGCCGCTCAACTACG
CCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCTACCTGGACTCCGACCTCGTGCTCGTCGAC
GACGTGGCCAAGCTCTGGCGCACCGACCT---------CGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCCAA
CTTCACCAAGTACTTCACCGCCCGGTTCTGGTCGGAGGAGCAGTTCGCCGGGACGTTCGAGGGG---------------A
GGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGCTCGACCTCGCGCGGTGGCGGCGCGCGGGCTACACGCAGCGCATC
GAGCGGTGGATGGAGATACAGAAGTCGCCGCCTGGGCGCATCTACGAGCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGTT
CGCGGGGCACGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACATCCTGGGCAGCTGCCGCG
ACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAACCGTGGGCGCGGCTGGGCGGCGGGCGGCCG
TGCCCGCTGGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGCCGTGGAGCCGTCCCGGTAACC----GCCCG
CAAACAAA-----ACTACTACAAAGATTCTTTTCCTTCTTTCGCCGACCCGTATAAATCCTGAGCTCTAATTCTTGGTCA
CCGTTACATGTTCAAAAACCTATATATTTTTTCTCCTTCTTCTTCTCCTCCTTCCCG-----TTTTAATTTCTTCTTCTG
TTGAATTAAACGTTTTGTGTTACTCCTAGATTGTTGGTGTTGGTAGTGATCTGTTGTCCCACATATTTTTGATCCTTTGT
TTGGTGCTACAAAAAAGGTCATTTGTATCATACTCC--TACACTCTACAGAGCTGCAGCCTCATCATCACATCATGGTGA
TGATGATGATGATAGATAAATAAATAA--------ATAAAAGCAGAGGGAGGGAGGGAGAGAAACAGACTTTGCAAGCAT
TTGTTGTTCGTCTTTCCCTTAAATGGCAATACTAT-CTCACTCTCTGCT-----GTTTGGTGGCTTGGTCTGTTGTAGTA
CTGGTACTCT---GGCAAACGGTGGCAATCCATCAATTCAATTCGCACATCCATCCCCCTGAAGAGTCAGCCAGTCCAAT
GCAACGCCTGCACCGGCCTTAATGCTGCTGGCAGAAGA---GTGTCCTACCACTCCTACTCCATGGACCGGTTCCTTGGG
A----TGGATGGATCATGTCAAAATCTCTGGCAGACATGAGTAACTTGGAATCCT-CCTTTGTGGCTCGTGCACTACCAA
-GCTGACACCAACAACCATTTTGAGCTTAAGCACTCGCGATCTGCCGATAGATTCATCATCAGTTAATTATGGGGAGAGC
GTTTCCGTTAAGCTCCCGACCCGACGACTGAAAGATGATGGATGGGGAAGGGAGATGGGCGG-----------GGAGGAC
GTGGAGGCCCTGGGTTGCAGCGAGCAACACGGGACTTGTGAGCTACCGCCCGT-------CTC----CTTTTCGAGGGCC
CTTTCCGGTGGGGCCTCACTCACCACTTGCTGGGCTCGCCGCTTTATTCTTTCTTTTGCAAATCATTATTGTGCTCTTCC
TCTCCCTT
>chr5D_550
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---------------------------------------------------------------------ACCGGAGCGGC
AGATACAATAAGCCGCCGCCACCACGCCGCCGCCACTGCAGAAAAGGCCGAGCAGTCGCACAGGGGAATCGCCTCGCCTC
GCCTGTGGCCGCGGTGGGTTGGTGGGTGC-------CGTCGCCTCCTAT-------TCTGAACCCCACTCC-------CC
ATTACCACGCCTCGCCTGGATGCCCTCTCGCTTCTCGCGGTGG-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------GCTGATGGTGGTCTTGTCGCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATC
CGGTCATCGCAGTTCGACAGCCACGTCCGCTTCCCCGGCCAGATCGCCGGGGGCGCGAGGGGCCTCCCCTTCCGCCGCGC
GCCGTCCTTCCGCAATGCCGCTGACTGCGGCAACGCCACCG---GCAATGTCTGCAACCCCTCGCTCGTCCACATCGCGA
TTACTCTGGACGAGGGGTACCTGAGGGGCTCGGTCGCCGCGGTCCATTACGTGGTTCAGCACGCCATGTGCCCCGAGAGC
GTCTTCTTCCACTTCCTCGTCTCTGACCCGAGCCTGGGCGACCTCGTCCGCGCCGTCTTCCCGCAGCTCCGGTTCAAAGT
CTACTACTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGCGCGGCAGGCGCTGGAGGAGCCGCTCAACTACG
CCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCTATCTGGACTCCGACCTCGTGCTCGTCGAC
GACGTGGCCAAGCTCTGGCGCACCGACCT---------CGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCATGCCAA
CTTCACCAAGTACTTCACCGACCGGTTCTGGTCAGAGGAGCAG-------------------------------------
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>chr2D_1243
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---------------------------------------------------------------GCGCGTGCACATCGCCA
TGACGCTGGACGCCAACTACCTGCGCGGCACCGTCGCGGCCGTCTTCTCCATCCTGCAGCACACGGCGTGCCCGGAGGAC
GTGTCCTTCCACTTCCTGGCGGCGCGGCGGCGGGACGCCGACGCCGTGCGCGCCACGTTCCCGTACCTGGACCCCAGCGT
GTACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCGCCACGCGCTGGACCAGCCGCTCAACTACG
CGCGCATCTACCTCGCCGACACGCTGCCCCGCGCCGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCGTGGAC
GACGTGCGCAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTGGTGGCGGCGCCCGAGTACTGCCACACCAA
CTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGCCACGTTCCGGCAGGGCCCGCATCGGCGCC
GGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGTGGCGCGCGGGGGGATACTCGCGGCGGGTG
GAGGAGTGGATGGCGATCCAGAAGGAGGAGAA---GCGGATCTACAGCCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGCT
CGCCGGGGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGGGACAACGCGGAGGGGAGGTGCCGGA
GCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGGAAGCCGTGGCTGCGGCTCGACACCCGGAAGCCG
TGCACCGTCGACTACCTCTGGGAGCCCTACGACCTCTAC-----------------------------------------
--------------------------------------------------------------------------------
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--------
>chr2B_1243
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---------------------------------------------------------------GCGCGTGCACATCGCCA
TGACGCTGGACGCCAACTACCTCCGCGGCACCATCGCCGCCGTCTTCTCCATCCTGCAGCACACGGCGTGCCCGGAGGAC
GTGTCCTTCCACTTCCTGGCGGCGCGGCGGCGGGACGCCGACGCCGTGCGCGCCACCTTCCCGTACCTGGACCCCAGCGT
GTACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCGCCACGCGCTGGACCAGCCGCTCAACTACG
CTCGCATCTACCTCGCCGACACGCTGCCCCGCGCCGTGCGCCGGGTCATCTACCTCGACTCCGACGTGGTGGTCGTCGAC
GACGTCCGGAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTGGTGGCGGCGCCCGAGTACTGCCACACCAA
CTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGCCACGTTCCGGCAGGGCCCGCACCGGCGGC
GCCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGTGGCGCGCGGGGGGCTACTCGAGGCGGGTG
GAGGAGTGGATGGCGATCCAGAAGGAGGAGAA---GCGGATCTACAGCCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGCT
CGCCGGCGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGGGACAACGCGGAGGGGAGGTGCCGGA
GCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGGAAGCCGTGGCTGCGGCTCGACACCCGGAAGCCG
TGCACCGTCGACTACCTCTGGGAACCCTACGACCTCTACAAGGCCGCCGCCGCC--------------------------
--------------------------------------------------------------------------------
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--------
>chr2A_1426
--------------------------------------------------------------------------------
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------CTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCGCCACGCGCTGGACCAGCCGCTCAACTACG
CGCGCATCTACCTCGCCGACACGCTGCCCCGGTCCGTGCGCCGCGTCATCTACCTCGACTCCGACGTGGTGGTCGTGGAC
GACGTGCGCAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTGGTGGCGGCGCCCGAGTACTGCCACACCAA
CTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGCCACGTTCCGGCAGGGCCCGCACCGGCGCC
GGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGTGGCGCGCGGGGGGGTACTCGAGGCGGGTG
GAGGAGTGGATGGCGGTGCAGAAGGAGGAGAA---GCGGATCTACAGCCTGGGGTCGCTGCCGCCGTTCCTGCTGGTGCT
CGCCGGCGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGGGACAACGCGGAGGGGAGGTGCCGGA
GCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGCAAGCCGTGGCTGCGGCTCGACACCCGGAAGCCG
TGCACCGTCGACTACCTCTGGGAGCCATACGACCTCTAC-----------------------------------------
--------------------------------------------------------------------------------
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>chr4B_1427
--------------------------------------------------------------------------------
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-------TTCGACCCGTCGCGCGTCCGGGGACGTATCTCCCGGTCGATCCGCCATGCGCTAGACCAGCCGCTCAACTACG
CGCGCATCTACCTTGCCGACACGCTTCCCCCTGATGTGCGCCGGGTTATCTACCTCGACTCCGACGTGATCGTCGCCGAC
GACATCCGCACACTCTTCTCTGTGGACCTCGCG---------GGCCACGTGGTGGGCGCACCGGAGTACTGCCACGCCAA
CTTCACCAACTACTTCACGGACACATTTTGGATGGACCGGGCGCTCAGCGGAACATTCCACGGG---------------C
GGCGCCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACGTGGACCAGTGGCGCACCGGCGGGTACACGAGGCGGGTG
GAAGGGTGGATGGCCGTGCAGAAGC---AGAA---GAGAATCTACCACCTCGGCTCTCTGCCGCCGTTCCTTCTGGTGCT
CGCCGGGGATATCCAGGCCGTGGACCACCGGTGGAACCAGCACGGGCTAGGCGGCGACAATGTCAAAGGGCGGTGCCGGG
GCCTGCACCCGGGACCCATCAGCCTGCTGCACTGGAGCGGCAAGGGAAAGCCCTGGCACCGTCTCGATGCCCGGCGGCCG
TGCACCGTCGACTACCTCTGGGCGCCCTACGACCTCTACCGGCC------------------------------------
--------------------------------------------------------------------------------
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--------
>chr4D_1427
--------------------------------------------------------------------------------
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-------TTCGATCCGTCGCGCGTCCGGGGACGTATCTCCCGGTCCATCCGCCACGCTCTGGACCAGCCGCTCAACTATG
CGCGCATCTACCTTGCCGACACGCTTCCCCCCGACGTGCGCCGGGTGATCTACCTCGACTCCGACGTGATCGTCGTCGAT
GACATCCGCACGCTCTTCTCCGTGGACCTCGCG---------GGCCACGTAGTGGGCGCACCGGAGTACTGCCACGCCAA
CTTCACCAACTACTTCACGGACACATTTTGGATGGACCCGGCGCTCAGCGGGACGTTCCACGGG---------------C
GGCGCCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACGTGGACCAGTGGCGCACCGGCGGGTACACGAGGCGGGTG
GAAGGGTGGATGGCCGTGCAGAAGC---AGAA---GAGAATCTACCACCTCGGCTCTCTGCCGCCGTTCCTTCTGGTGCT
CGCCGGGGACATCCAGGCCGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAATGTCAAAGGGCGGTGCCGGG
GCCTGCACCCGGGACCCATCAGCCTGCTGCACTGGAGCGGCAAGGGAAAGCCGTGGCACCGGCTCGATGCCCGGCGGCCG
TGCACGGTCGACTACCTCTGGGCGCCCTACGACCTCTACCGGCC------------------------------------
--------------------------------------------------------------------------------
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--------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S---S--------
--SSSS-S---SSS----S--S-S------------S------S-S----S------------S---S------------
-------------------S---------------------------------------------SSS----------S-
----------------------------------------------S-SSSSSS----------------------SSS-
S-SSSSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
----------------------------S-----------------------S--SSSS---------------------
-----------------------------------------------S-S------------------------------
-----------------------------SSSSSSS-------------SSSSSSS------------------------
----------S---------------------------------------------------------------------
--------------------SSSSSS----------------------------------------S-------------
--------------S-----------------------------------------------------------------
------------------------------------------S------S------------------------------
----------------------------------------S---------------------------------------
-----------------------------------------------------S--S-----------------------
-----------------------------------------SSS------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SS---
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SS---
-------S------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------------------S-----------------------------S--S-----
----------------------------------S-SS-----------------------------SS-----------
--S-------------S-S--------SSSSSSSS---------------------------------------------
-------------------------------S-----------S-----SSSSS--------------------------
--------------------------------------S-----------------------------------------
---------------------------------------SS---------------------------------S-----
-SSSS---S----------------------------------------------------------------------S
---------------------S----S-S--------------------S------------------------------
---------------------------------------------------------------------SS---------
-------SSSSSS-SS---------------------------------S--SSSSSSSS--------------------
---------------------------------------------------------------------------S-S--
--------
>forward_826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTGAGGAGGAGGAGGACGAG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2612
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTGGTTTGGTGGCTTGGTCT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
