>input_sequence_60573
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-----------------------------------------------ATGCGTCAGTTTCAGTATAAGTCAACATTTCAG
ACCAATTTGCCTCCTACCGCTAGCAATTACCAGCAGAAGTCTAGCGCTGCAACAAAAAGTGGGGGAGGGGGTGACAGTGA
TATTCAGACATCCAAAGCAATCTATGCAGGGGGAGTTCTGAATGGTAATCAAGACGCTGCGGGAGGGGGGATGGAAAACA
AACAACAGGCAACTAACAAGATCATCTGTCACAAATGTGGAGAGAAGGGTCATAATTCCAAGGGGTGTGAAGCTAAAGTC
AAATGTTCCATC------------ACACACATAGCTGAATTATGTGCATGGCTGCATCAGAAAA-AACCAGTGGCATCTT
TGGTGGGGTTTGGAGGAGAAGGACTAGGCATTTTTGTGGCAGATCATGCAAAAGAGTTACCTGGGAATAATAATAATGAT
GCAGTAGCTTTGGTCAGGCTCAGAGATGACTGTGATTTGGAAATTGATTCAGAGGATCTTATCAATAGCTTGGCAAAAAC
TTACCCCTGGAGGTGGGATTGGAAAGCAAAGAAAGTGTCTGATGGAGTTTTCCTGCTAAATTTTCCATCTGTTGCAAGGA
TCAATGAGGCTGCCATTTATGACTGGGTCCCTCTGAAAGGTGGAAACATAATGATCAAAGTGAAAGTCTGGAATGATGAT
GCTATGGCTATTGGTAAACTAGCATTGATATGGGTCAGCGCTAAGGGGGTAC-CAAAAACAATGAAAAACTATCAGGGGC
TTTGTGAGATTGGATCAATGATTGGATATGTGCAAATTGTTGACGTGGATTTGGTAAACATAAGTGGTTTGGTCAAGCTG
AAGATTGCTGTGGTGGATCACACCAAAATCCCCAGATGGACTAAGCTGACAACTCCAAATCTCATGGTTTACAGAATTTT
CTTTGAGGTGGAAGAGGTTTTAGATGAAGGATGGACCAAACTAGAAGATGAACTATCACAAGGATATGAGCAGTGGATGG
ATTTCCAACATGAGGAGGATGAAAACAGAGAGGCAAAGAAAGCAAAAAC-AGATGCAAATGTTGCAATCTGTGCAAGTAC
TAGAACCAGGATGGCACTAGCTAGAAGACAAAGAGGCTGCTATTAA----------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr3D_1_TraesCS3D01G260000
TTTAAAGGAAACAAAGACTAGGGGAAGATTTTGGGTACTTGAACAAATTGAGGATGAAGAGGTTGACTCTGCAACTGAAG
ATATAGAACATGGAAATCCTTATCTAGCCACTCTGGCAGATGCTTTTGCTTGTGCCAAACAAGTGAAGAAGATTGGCAAG
AGAAAGGAGAAGATAGTGAAATGCAATGGACAGACTGCCAAAAAAAGTTGCGACAGGGACAGAGTGCTTGAAGATGTAA-
--ACAGGCAAGTGAACTTCCCTTGTTGTATTGGGAATAATAGGAGACCATCTGCAAGATGTGGTTTGATCAAGGATGATC
GATGGTATCAAATTAGCAGAGGAAGGAAAGTGGATTTAGGAAATGGAGCTGAACCCAATTGGATGCATTGGAGGTGTGTA
AAGAGATTTGGGAATTCATCAGCACACAAACTGATTGATGCCCCTCTCTCAATACGACCTCCTGCATGTTGTGAGGGTGA
AACAGGGGATGACTGTGAATTTTTGGGAGATTGTTTTATCTCAATTCGAACTCTGAAACGGACTGGGCTTAATAAAGA--
-AACGGGCCAAATTAAAGGAGATTATGGGCTAGA-GGGGGAAAAAGTAGGCCACAAAAGTAGAGAAAACTTTAGGCCTAC
AAGAAAAGGGGGTTATATACACCGAGTCCTGGCCTTGGGTGTTGAGACGACCCAATTCCTACAGTCTAGGGTTTCCCACT
TGTGGTGTTCGCTCCCCTCCGCCGCCACGAATACCAGCAGCCCTCGATTCCCGGAGATGGCTGATCGTTTCGATCCAGGA
AGAGGTGGCGGTGGAAGAGGTATTGAGAGAGGAAGTAACTGGAGACTGGTGATGAATTATGGAAGGGATGCACAATTTGA
TAGACAAGATTAGGGCTACCATGTCCGCCCTCGACCCCCCTTCAAAAAATTTCAAGGTAATCAATTTCAGAACCACTTTG
CTAGAGAGAGCTTTGGCAATTGGAATCGTGAGGGTGGTGGCCGTGACATGCGTCAGTTTCAGTATAAGTCAACATTTCAG
ACCAATTTGCCTCCTACCGCTAGCAATTACCAGCAGAAGTCTAGCGCTGCAACAAAAAGTGGGGGAGGGGGTGACAGTGA
TATTCAGACATCCAAAGCAATCTATGCAGGGGGAGTTCTGAATGGTAATCAAGACGCTGCGGGAGGGGGGATGGAAAACA
AACAACAGGCAACTAACAAGATCATCTGTCACAAATGTGGAGAGAAGGGTCATAATTCCAAGGGGTGTGAAGCTAAAGTC
AAATGTTCCATC------------ACACACATAGCTGAATTATGTGCATGGCTGCATCAGAAAA-AACCAGTGGCATCTT
TGGTGGGGTTTGGAGGAGAAGGACTAGGCATTTTTGTGGCAGATCATGCAAAAGAGTTACCTGGGAATAATAATAATGAT
GCAGTAGCTTTGGTCAGGCTCAGAGATGACTGTGATTTGGAAATTGATTCAGAGGATCTTATCAATAGCTTGGCAAAAAC
TTACCCCTGGAGGTGGGATTGGAAAGCAAAGAAAGTGTCTGATGGAGTTTTCCTGCTAAATTTTCCATCTGTTGCAAGGA
TCAATGAGGCTGCCATTTATGACTGGGTCCCTCTGAAAGGTGGAAACATAATGATCAAAGTGAAAGTCTGGAATGATGAT
GCTATGGCTATTGGTAAACTAGCATTGATATGGGTCAGCGCTAAGGGGGTAC-CAAAAACAATGAAAAACTATCAGGGGC
TTTGTGAGATTGGATCAATGATTGGATATGTGCAAATTGTTGACGTGGATTTGGTAAACATAAGTGGTTTGGTCAAGCTG
AAGATTGCTGTGGTGGATCACACCAAAATCCCCAGATGGACTAAGCTGACAACTCCAAATCTCATGGTTTACAGAATTTT
CTTTGAGGTGGAAGAGGTTTTAGATGAAGGATGGACCAAACTAGAAGATGAACTATCACAAGGATATGAGCAGTGGATGG
ATTTCCAACATGAGGAGGATGAAAACAGAGAGGCAAAGAAAGCAAAAAC-AGATGCAAATGTTGCAATCTGTGCAAGTAC
TAGAACCAGGATGGCACTAGCTAGAAGACAAAGAGGCTGCTATTAAAGAGCAAGAGGCTGCTGATAAGCTATTGTACAAT
AGGAATCTGGATATTCAGAAACTTAATAAAACTAATGAGGAGATAGGCTCTACATCAGTCAATGGAGAGG--GAGA--GA
AAAGGGAGGATGATGAGATGCAAAAGGATGATTCATAGGAGAAAGCTAATGAGGAAGAACCTTCTCAGTTTGTGAGTCTT
GGCACAAAACTTGGGATTGATGTTGTTGAAGGGGCAGAAATGGAAAACATCAAAGGAGGTG----AAACCCAAGAGCTTC
CAAGATACAGTGGGAGGATTGCCTTGAAGGACAGAGATGACATTCCTATACTGGATAGAGCTATGACTTTGGCCAGAGCC
AAAAATCTAGCTCTATCTGAAGGTATGTCTGAAACTGCTAGCACTTCTTAACTTGAAAATATTGAGTTGATTGATGTGGC
AAATTTGATAGGAATAGATTTGGGGC-TACTATAGATATGGTGGAACATAACCTGAACTTGATACAAACT-TTAGAACAG
GCCAGGAAAGAAATTTATCTAGCAAGCTTCAGGGAAACTAAAAATGCTCAGGAAGAAGAACATGTGTTGGAACCTGAAGA
TGTTAATAACATTTTTCTGGACCTGTTGTTATTACGTAAAAATGAGGATGATGAACAGGTAGACATAAGAATGGAAAATG
TATTGGGAAATGTGAGGGAGGGTCTGAAAGCAAATAGCACTTCTTTTGAGGCTATTGCAGTT---ACCCCGGTGAAAACT
GTGTTGAGGAGGAAGAAAAAAGG-AAAAAT--------------TAAGTAATTTTTTTTCCCACATAAACTTCCTTACCC
TCTGCCTTCTGACAA-AA---------------------AAAATGAGGGGCTTGATTTGGAACTGTAGGGGAATTAGAGA
TAAGAATGAGAAGGATTTTATTAAAGAACAAATTACTATGAACAACCTTGATTTTGTGGGTGTCCAAGAAACAATCACAG
GTGAATTCACCTCATTGGAGTTGTCGGCGTTGAGTACCCAGGAAGATTTTGGTTGG
>chr6A_1
TTTAAAGGAAACGAAGCCAAGGGGAAGATTTTGGGCACTTGAGCAAATTGAGGATGAAGAGGTTAACTCTGCAATTGAAG
ACACAGAACATCGAAATCCTTACCTAGCCACTCTGGCAAATGCTTTTGCCTGTGCCAAACAAGTGAAGAAGATTGACAAG
AGAAAGGGGAAGATACTGAAATGCAATGGACAGACTGATAAAAAATGTTGCAACAGGGACAGAGCGCTTGAAGATAAAA-
--ACAGGCAAGTAAACTTCCCTTCGTGTAGTGGGAATAATAGGAGACCATCTGCAAGATGTGGTTTGATCCAGGATGATC
AACGGTATCAAATTTTCAGAGGAAGGAGAGTGGATTTAGGCAATGGAGCTGAACCCAATTGGATGCATTGGAGGTGTGTA
GAGAGATTTGGGAATTCATTAGCACACAAACCGATAGATGCCCCTCTCTCAGTATGATCTCCAGCACGTTGTGAGGGTGA
AACAGGGGATGATTGCGAATTTTCGGGAGATTGTTTTATCTCAATTCGAACTCTGAAACGGACTGGGCTTAATAAAGA--
-AACGGGCCAAATTAAAGGAGTTTATGGGCTGGAGGGGGGG-AAAGTAGGCCAAAAAAGTGGGGAAAACTTTAGGCCTGC
AGGAAAAGGGGGTTATATACGCCCAACCTAGGTCCTGGGTGTTGAGACGACCCAATTCCTACAGTCTAGGGTTTCCCACT
TATGGTGCTCGCTCCCCTCCGCCGCCGCAAATACCAGCTGCCCTCGATTCCCGAAGATGGTTGATTGTTTCGATCCAGGA
AGAGGTGGCGATGGAAGAGGTAATGAGAGAGGAAATAATTGGAGGCT-GTGATGAATTATGGAAGGGATGCACAATTTGA
TAGGCAAGATCAGGGCTACCATGTCCACCCTCGACCCCCCTTCAGAAATTTCCAAGGTGATCAATTTCAGAACCACTTTG
GTAGAGAGAACTTTGGCAACTGGAATCGTGAGGGTGGTGGCCGTGACATGCGTCGGTTTTAGTATAAATCAACATCTCGG
ACCAATGTGCCTCCTACCGCTAGCAGTTACCAGCAGAAGTCTAGCACTGCAACAAAAAGTGGGGGAGGGG-TGACAGTGA
TATTCAGGCATCCAAAGCAATCTCTGTAGGAGGAGTTCTGAATGGTAATCAAGGCGCTGCGGGAGGGGGG-TGGAAAACA
AACAACAGGCAACTGACAAGATCGTCTGTCACAAATGTGGTGAGAAGGGTCATAACTCCAAGGGGTGTGAAGCTAAAGTC
AAATGTTCCATCTGTACTAAAGACACACACATAGCTGAATTCTGTGCATGGTTGCATCAGAAAA-AACCAGTGGCATCTT
TGATGGGTTTTGGAGGAGAAGGACTAGGCATTTTTGTGGCAGATCATGCAAAGGAGTTACCTGGGAATAATAAAAATAAT
GCAGTAGCTTTGGTCAGGCTCAGAGATGGCTGTGATTTGGAAATTGATTCAGATGATCTTATCAAAAGCTTGGCAAAAAC
TTACCCCTGGAGGTGGGATTGGAAAGCAAAGAAAGTGTCTGATGGAGTTTTCCTGGTAAATTTCCCATCTGTTGCAAGGA
TCAATGAGGCTGCCATTTATGACTGGGTCCCTCTGAAAGGTGGAAACATAATGGTCAAAGTGAAAGTATGGAATGATAAT
ATTATGGCTATTGGTAAACTAGCATTGATATGGGTCAGAGCTAAGGGGGTAC-CAAAAACAATGAAAAATTATCAGGGGC
TTTGTGAGATTGGATCAATGATTGGATATGTACAAACTGTTGACATGGATCTGGTAAACAAAAGTGGTCTTGTCAGGCTG
AAGATTGTTGTGGTGGATCACACCAAAATCCCCAGATGGAATAAGCTGACAACTCCAAATCTCATGGTTTACAGAATTTT
CTTTGAGGTGGAAGAGGTTTTAGATGAAGTATGGACCAAACTAGAAGATGAAGTATCACAAGGATATGAGGAGTGGATGG
ATTTCCAACATGAGGAGGATGAAAATAGAGAGGCAAAGAAAGCAAAAAAAAGATGCAAATGTGGCAATCTGTGCAAGTAC
TAGAACCAGGATGGCACTAG----AAGACAGAGAGGCTGCTATTAAAGAGCAAGAGGCTGCTGATAAGCTACCATACAAT
AGGAATCTGGATATTGAGAAACTCAATAAAACTAATGAAGATATAGGCTCTACATCAGTTAATGAAGAGG--GAGA--GA
AA--GGAGGAGGATGAGATGCAAAAGGATGATTCAGAAGAGAAAGCTAATGAGGGAAAACCTTCTCGGTCTGTGAGTCTT
GGCACAAAACTTGGGATTGATGCTGTTGAAGGGGCACAAATGGAAAACATCAAAGGAGGTG----AAACCCAAGAGCTTC
CAAGATACAGTGGGAGGATTTCCTTGAAGAACAGAGATGACATTCCTATACTAGACAGAGCTATGACTTTGTCCAGAGCC
AAAAATCTAGCTCTATCTGAAGGTATGTCTGAAACTGCTATTACTTCTTATCTTGAAAATGTTGAGTTGATTGATGTGGC
TAATTTGATAGGAATAGATTTGGGGGTTACTATATATATGGTGGAACATAACCTGAATTTGATACAAAAACTTAGAACAG
GCCAGGAAAGAAATTTATCTAGCAAGCTCCAGGGAAACTAAAAATGCTCAAGAAGAAGAACATGTGTTGGAACCTGAAGA
TGTTAATAACATTCTTTTGGACCTGTTGCTTTTAAGTAAAAATGAGAATGAAGAACAGGAAGACATAAGAATGGAAAATA
TATTGGGAAATGTGAGGGAGGGTCTGAAAGCAAATAGCACTTCTTTTGGGGCTATTGCTGTTAAGACCCCGGTGAAAACT
GTGTTGAGGAGGAAGAAAAAAGG-AAAAAT--------------TAAGTATTTTTTCCT-CCATATAAACTTCCTTACCC
TCTATCTTTTGACACGAA---------------------AAAATGAGAGGCTTGATTTGGAATTGTAGGGGGGTTAGAGA
TAAGAATAAGAAGGATTTTACCAAAGAGCAAATTACTATAAACAACCTTGATTTCGTGGGTATCCAAGAAACAGTGAAAG
GTGAATTCACCCCATTGGAGCTGTCGGCATTGAGTACCCAGGAAGATTTTGGTTGG
>chr3A_1
TTTAAAGGAAACAAAGACTGGGGGAATATTTTGGGTACTCAAACAATCTGAGGATGAAGAGGTTGACTCTGCAACTGAAG
ATACAGAACATCGAAACCCTTATCTAGCCACTCTGGCAGATGCTTTTGCTTGTGCCAAACAAGTGAAGAAGATTGGCAAG
AGAAAGGAGAAGATACTGAAATGCAATGGACAGACTGCCAAAAAAAT-TACAACAGGGGCAGAGTGCTTGAAGATGTAA-
--ACAGGCAAGTAAACTCCCCTTCTTGTAGTGGGAGTAATAGGAGACCATCTGCAAGATGTTGTTTGATCCAGAATGATC
GATGGTATCAAATTATCAGAGGAAGGAAAGTGGATTTAGGCAATGGAGCTGAACCCAATTGGACGCATTGGAGGTGTGTA
GAGAGC-TTGGGAATTCATCGGCACACAAACTGATCAATGCCCCTCTCTCAATACAATCTCCAGCACGTTGTGAGGGTGA
AACAGGGGATGATTGCGAATTTTTGGGAGATTGTTTTATCTCAATTCGAACTCCGAAACGGACTGGGCTTAATAAAAA--
-AACGAGCCAAATTAAAGGAGATTATGGGCTGGA-GGGGGG-AAAGTAGGCAAAAAAAGTGGACAAAACTTTACGCCCGC
AGGAAAAGGGGTTTATATACACCTAGGCCAGGCACTGGGTGTTGAGACGAACCAATTCCTACAGTCTAGGGTTTCCCACT
TGTGGTGTTCGCTCCCCTCCGCCGCCGCGAATACCAGCAGCCCTCGATTCCCGGAGATGGCTGATCGCTTCGATCCAGGA
AGAGGTGGCGGTGGAACAGGTATATAGAGAGGAAGTAACCGAAGAGCGGTGATGAGTTATGGAAGAGATGCACAATTTTA
TAGACAAGATCCGGGCTACCATGTCCGCCCTCGACCCCCCTTCAGAAATTTCCAAGGTAATCAATTTCAGAACCACTTTG
GTAGAGATAGCTTTGGCAATTGGAATCGTGAGGGTGGTGGCCGTGACATGCGTCAGTTTTAATATAAATCAACATCTCAG
ACCAATTTGCCTCCTACCGCTAGCAATTACCAGCAGAAGTCTAGCGCTGCAACAAAGAGTGGGGGAGGGGGTGACAGTGA
TATTCAGACATCCAAAGCAATCTCTGCAGGGGGAGTTCTGAATGGTAATCAAGGCGCTGCGGGAGGGGAGATGGAAAACA
AACAACTGGCAACTAACCAGATCATTTGTCACAAATGTGGTGAGAAGGGTCATAACTCCAAAGGGTGTGAAGCTAAAGTC
AAATGTTCCATCTGTACTAAAGACACACACATAGCTGAATTATGTGCATGGTTGCATCAAAAAAAAACCAGTGGCATCTT
TGGTGGGGATTGGAGGAGAAGGACTAGGCA-TTTTGTGGCAGATCATGCAAAAGAGTTGCCTGAGAATAATAAAAATGAT
GTAGTAGCTTTGGTCAGGCTCAGAGATGCCTGTGATATGAAAATTGATTCAGATGATCTTATCAGAAGCTTGGCAAAAAC
TTACCCCTGCGGGTGGGATTGCAAAGCAAAGAAAGTGTCTGATGGAGTTTTCCTGGTAAATTCTCCATCTGTTGCAAGTA
TCAATGAGGCTGCCATTTATGATTGGGTCCCTCTTAAAGGTGAAAACATAATGGTCAAAGTGAAATTATGGAATGATGAT
GCTATGGCTATTGGTAAACTAGCAGTGATATGGGTCAGAGCTAAGGGGGGGTACCAAAACAATTAAAAACTATCAGGGGC
TTTGTGAGATTGGATCAATGATTGGATATGTACAAACTGTTGACATGGATTTGGTAAACAAAAGTGGTCTTGTCAGGCTG
AAGATTGCTGTGGTGGATCACACCAAAATCCTCAGATGGACTAAGCTGACAACTCCAAATCTCATGGTTTACAGAATTTT
CTTTGAGGTGGAAGAGGTGTTAGATGAAGGATGGACCAAACTAGAAGATGAACTATCACAAGGATATGAGGAGTGGATGG
ATTTCCAACATGAGGAGGATGAAAACAAAGAGGCAAAGAAAGCAAAAAC-AGATGCAAATGTGGCAATTTGTGCAAGTAC
TAGAACCAGGATGGCTTTAG----AAGACAGAGAGACTGCTATTAGAGAGCAAGAGGTTGTTGATAAGCTGCTATACAAT
AGGGATCTGGATATTGAGAAACTTAATAAAAATAATGAGGAGATAGGCTCTACATCAGTCAATGGAGAGGGAGAGA--GA
AA--GGAGGATGATGAGATGCAAAAGGATGATTCAGAAGAGAAAGCTAATGAGGAAGAACCTTCTCAGTCTGTGAGTCTT
GGCACAAAACTTGGGATTGATGCCGTTGAGGGGGCAGAAATGGAAAACATCAAAGGAGGTG----AAACCCAAGAGCTTC
CAAGATACAGTGGGAGGATTGCCTCGAAGAACAGAGATGGCATTCCTATACTAGACAGAGCTATGACTTTGGCTAGAGCC
AAAAATCTAGCTCTATTTGAAGGTATGTATGAAACTGCTAGTACTTCTCATCTTGAAAATGTTGAGTTGATTGATGTGGC
TAATTTGATAGGAATAGATTTGGGG-------------------------------------------------------
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>chr6B_4
AAATGG--AAACAAGGACCAGGGGAAAATTCTGGGCACTCGAACAACTCGGTGATGAAGAATCTGACTCTACAATAGAAG
ATGCTGAACATCGAAGCCCCTATCTAGCCACTCTTGCAGATGCTTTTGCCTGTGCCAAACAAGGGAAGAAGATTGGGAAT
AAAAGGGCAAAGATAGTGAATTGCAATGGACATAATGCCGGAAAAATCTGCTACACAGTCAGAGGGCTTGGTGACTCTGT
TCACAAGAAAGTTAGCTCATCGTCTTGTCAGGGAAGTAATAAGAAATCATCTGTCAGGTGTGGTTTGATTCAGAATAATC
GATGGTATCAGATTATTGGAGGGAAGAAAATGGATTTAGGTGCTGGAGTTGAGCCTAATTGGTTGCATTGGAGGAAAGTA
AAGAAAATTGGGAATTCATCAGTATGCAAACTGATTGATGCCCCTCTTTCTATACGATCTCCAGCTCGCAATGAGGGGGA
AACTGGAGATGACTGCGTGATTGCAGGGAACTTTGTGGTCTCTATTCGAACTTTGAAGCTGACTGGGCTTGATAAAAAAG
AAACATGCCATTTTAAAGGTGAAATTGGGCTGGA-GGGA-AAAAAGTAGGCCTAAAAAGTGGTGGAAACTTTTGGCCCGC
AGGGGGAAACA-TTATATGCACCCAGGACTGGTCCTGGGGGTTGAGACAAGCCAATTCCTTCGGTCTAGGGTTTCCCATT
TGTGGTGTCCACTCCCCTCCGGCGCCGCGAGAACCTGCTGCCCTCGATCCACAGGGATGGCTGACCGTTTTGATCCAGGA
AGAGGTGGAGGTGGAAAAGGAGCAGAGAGAGGTGGTAACTGGAGGCTGGTGATGGGCTATGGAAGAGAGGCG-AATTTAA
CAGGCAAGATCAAGGCTACCACGCTCACCCCCGACCACCCTTCAGAAACTTTCAAGGTAACCAGTTTCAGAATCACTTTG
GCAGAGAGAGTTTTGGCAATTGGAACCGTGAGGGTGCTGGTCGTGATACGCGTCAGTTTTAATACAAATCGACTTCTCAG
TCTAATCTGGCTCCTGCCACTAGCAACTACCAGCAGAAGTCTAGTGCTGCAACAAAAAGCGGGGGAGGTAGAGACAACGA
TATTCAGGCTTCCAAAGCTATTTCTGCAGGAGGGGTTCTGAATGGAAATCAAGGCTCTGCTGGAGGGGGA-TCGAAAGCA
AGCAGCTAGTGGCTGACAAAATCATTTTTCACAAATGTGGAGAGAAAGGGCATAACTCCAAAGGATGTGAAACGAAAGTC
AAATGCTCCATTTGCACTAAAGACACATACATTGCTGATTTCTGTGCATGGCTTCATCAG-AAAAAACCAGTGGCATCTT
TGGTTGGCTTGGGAGGAGAAGGTCTTGGCATTTTTGTGGCTGACCACACAAAAGAGCTTCCTGGGAATAACAAAAATGAT
GCATTTGCTTTGGTCAGACTCAGGGATGGATGTGATCAGAGTGTTGATTCAGATGATGTTATCAAAAGCTTAGCTAAAAC
TTACCCCTGGGGGTGGGATGGGAAAGCAAAAAAAGTGTCTGATGGTGTTTTCCTGGTAAATTTTCCATCTATTGCAAGGA
TTAATGAGGCTGCCATTTATGACTAGGTCCCTTTGAAAGGTGGAAATATAATGGTTAAGGTAAAGATCTGGAATGATGAT
GCAATGGCAGTGGGTAAACTAGCAGTGATTTGGGTAAGGGCTAAAGGAGTTC-CAAAATCAATGAAAAACTATCATGGTC
TTTGTGAGATTAGATCTATGATTGGATATGTGCTGGATGCTGATATGGATTTGGTGAACAAAAGTGGTCTTGTTAGACTG
AAGATTGCTGTGGTTGACCACACAAAAATCCCCATATGGACAAAACTGATAACTCCAAATCTCATGGTTTACAGATTTTT
CTTTGAGGTGGAAGAGGTCCTAGATGAAGGATGGACCAAACTTGAGGATGAGCTGTCACAAGGTTATGAGGAGTGGATGG
ATTTTCAGCATGAGGAAGATGAAAACAGAGAGGCTAAGAAAGCAAAAAC-AGACACTGATGGAGTAATTTGTGCAAGCAC
CAGAACCAGATTATCCTTGG----AAGAAAGAGATGCTGCTATTAAAGAGCAAGAAGCTGCTGAAAAACTGATTTACAAG
GGGGATCCAGATGTTGAGAAGATGAC-AAAAACAATGAGGAGATAGGTTCAACTTCACTTAATGGAGTGG--AAGAAGGG
AA--AGAGGAGGAGGAAATGTAAAACAACAATTCTATGGAGAAGACTAATGAGGAAGAACTCTCTCTGTCAATGAGTCTT
GGTACTAAACTTGGGATTGATGTGGTTGAAGGAGCAGAAACTGATATCATCAAGGAAGGGGGGCAAAAACCAAGAACTTC
CAAGATACAGTGGGAGGATCGCCTCGAAGCACAGAGATGACATACCTATACTGGACAGAGCTATGTCTTTGGCTAGAGCC
AAAAATCTAGCCCTATCTGAAGGTATGTCTGAACCTTCTAATATTTCTTATCTTGAAAATGTTGAGTTGATTGATGTTGC
TAATTTGATAGGAATAGATCTGGGGGTCTCTATAGATATGGTATAACACAACTTGCACTTGATTCATTCG-TTAGAACAA
GGCAGGAAAGAGATGTACTTAGCTAGTTCTAGGGAGATTAAAATTGCTCAGGAAGAGGAGCATGTGCTGGAACCTGATGA
TGTTAACATCATTCTTCTAGACATATTGCTTATAAGTAACAATGAGGAGGAGGATCAGGTAGATATTCAAATGGAAAAAG
TGCTTGGAGATGTGAGGGAGGGTCTGAAAGCAAACAACACCTCCTTTGAGGCTGTTGTAGTTAAGACCCCGGTGAAAACG
GTGTTGAGGAGGAAGAAGAAAAAGAAAAATTGAGGTCTCCTCATTAAATTTTCCTTT----CTCCTTGATTGCCTTTACT
TGGGTTTTAGACATATTTTTTAAATATAT----------AAGATGAGAGGTTTGATTTGGAACTGTAGGGGTATTGGGGA
TAAAAATAAGAAGGATCTTATTAAAGATCAAATTGCCACAAACTGCCTTGACTTTGTGGGTATTCAAGAAACAATGAAAA
GTGAGTTTACCTTGTTGGAGTTGTCGTCGTTGAGCACTCAGGAAGATTTTTCTTGG
>chr3A_2557
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---------------------------TACTATAGATATGGTGGAACATAACCTGAACTTGATACAAACT-TTAGAACAG
GCCAGGAAAGAAATTTATCTAGCAAGCTCCAGGGAAACTAAAAATGCTCAGGAAGAAGAACATGTGTTGGAACCTAAAGA
TGTTAATAACATTCTTCTAGACCTGTTGTTATTAAGTAAAAATGAGGATGATGAACAACTAGACATAAGAATGGAAAATG
TATTGGGAAATGTGAGGGAGGGTCTGAAAGCAAATAGCACTTCTTTTGAGGCTGTTGCAGTTAAGACCCCGGTGAAAACT
GTGTTGAGGAGGAAAAAAAGGAAAAAAAAA--------------TAAGTATTTATTT----CACATAAACTTCCTTACCC
TCTGCCCT----ATATTTTTTTGGAATCTTAATTGACGCAAAATGAGAGGGTTGATTTGGAATTGTAGGGGAATTAGAGA
TAAGAATAAGAAGGATTTTATTAAAGAAAAAATTACTATAAACAACCTTGATTTCGTGGGTATCCAAGAAACAATGAAAG
GTGAACTCACCCCATTGGAGCTGTTGGCATTGAGTACCCAGGAAGATTTTGGTTGG
>SNPs
--------------------------------------------------------------------------------
---S-------S--------------------------------------------------------------------
---------------------------------------------------S----------------------------
------------S----------S-----S----------------------------------------S---------
---------------S------------------------S---------------------------------------
---------------------------------------------------------S----S---S-------------
---------------S----------------------------------------------------------------
-------------------------------S---------------------S------S-----------------S-
-S---------------------S--S-------S---------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------S---S-------------------------------
S----------------------------------------------------------S-------S-------S----
--------------------------------------------------------------------------------
-----------------------S-----------------------------S--------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----------------------------S------------------------S-----------S--------------
-------------------------------------------------------S------------------------
-----------------------------------------------------S--------------------------
--------------------------------------S-----------------------------------------
------------------------------------S-------S---------------S-------S-S----S----
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----------------------------------------------------------------------S---------
--------------------------------------------------------------S-----------------
--------------------SSSS------S----------------------------------------S-S------
---------------S----------------------------------------------------------------
--SS-------------------------------S---------------------------------S----------
--------------------------------------------------------------------------------
-----------------------------S-------------------------S------------------------
-----------------------------------------S--------S---------S-------------------
S------------------------S------------------------------------------------------
----------------------------S---------------------------------------------------
-------------S--------------------S---------------------------------------------
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--------------------------------------------------S------S-S--------------------
--------S--------------------------------------S--------------------------------
-------S-------------------------------S---------------------S-------------S-S--
--------------------------------------------------------
>forward_675
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---------------TATACACCGAGTCCTGGCCT---------------------------------------------
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>reverse_1836
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---------------------------------------------------------------------------AGCTG
AAGATTGCTGTGGTG-----------------------------------------------------------------
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>forward_1469
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---------TTGGTCAGGCTCAGAGATGA---------------------------------------------------
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>reverse_3008
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-----------------------------------------------GGGCTTGATTTGGAACTGTAGG-----------
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--------------------------------------------------------
