>input_sequence_60561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ATGAC
GGCGGCGTCGCCGATGGTGCTGTCCCTCCTGCTCTTCGCCTCGCTCACGGCGCTGCTCGTCCTGGCCCCTCGCGCGTCGT
CGCCGCCGCTGCCGCTGCCGCTGCCCGTGGTGGTTGGGGACGAGGAGGCGCCGGCCGCCGCTGGGGGTGCTGCTGCGGGG
AGCAGCGGCGGGGGGGCGGGAGTTGAGGAGGGACCGGAGGACCTCGCGCTGTCCCGGCGCGTCACGCTCGACGCCGGCGA
GGGTGCGGCGGTAGCGTCCAAGGTGGCCTTCATGTTCCTGACCAACTCCGACCTCACCTTCGCGCCGCTTTGGGAGCGCT
TCTTCGCGGGGCACGCCCACCAGTTCAACGTCTACGTGCACGCAGACCCGGCGGTGAGGCTGCGGCACCCCCCTACGCCT
TCCTTCCGGGGCCGCTTCGTCGCGGCCAAGCCGACGCGGCGCGGGGACCCGAGCCTCATCGCTGCGGCGCGGCGGCTGCT
TGTCGCCGCGCTACTGGACGACCCGGCCAACGCCTACTTCGCACTGCTCTCGCAGCACTGCGTCCCGCTCCACTCCTTCC
CGCGGCTCTACGCGGCGCTCTTCCCGCC---CAAG---------GCCGCGCACCACCACCGCCTCCCTAGCTATATCGAG
GTGCTTACCGGCGAGCCCCAGATGCCCGCGCGCTACGTGGCGCGGGGTGACGACGCCATGCTCCCGGAGGTGCCCTTCGA
CCGGTTCCGCATCGGCTCCCAGTTCTTCACGCTGGCCCGCCGCCACGCCGTGCTAGTCGTCCGCGAGCGCCGTCTCTGGC
GAAAGTTTAGGGAGCCGTGCCTGCAGGAGTCGCAGGACTCTTGCTACCCGGAGGAGCACTATTTCCCGACGCTT-CTCGA
CATGGCCGACCCCGCCGGCTGCACCCGGTACACGCTCACGCGCGTCAACTGGACCGACAGCTTCGAGGGCCACCCGCACA
CGTATGCCGCGCCCGAGGTGTCGCCGCGGCTCGTCGCCGAGCTGCGCCAGTCCAACAGCTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCCGACTGCCTTGGCCCGCTCATGGCCATCGCCGACACCGTCATCTTCAAAGATTGA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr2A_1_TraesCS2A01G249400
ATGCATTATTTCATTTATTAGGTTGTAGACTCATCTTTTCTTGATATGTGTGATGTTACAGTAACTAGCTATGTTACCAT
ATATCTCTTTTTTTCCATTAATTACATGTCACGTCATCTATTTTATCAAGATAAGTGTGATGTTACCGTCTATATTACTC
CCACTATAAATAGTCTAAGAGGTTATAGATACAATACCGATAGACACGTGTGCCTCTCCTCTGCCCTGCCGGGACCGACG
TGCATTCGACGAGTCATTTCGCAGCG---------ACCCTGTTGATCTCAACATTGAATTCTTCGGTTGCTGGCAAAATT
CTCCGTGATGAATGAAAGTATATCAA--------TTGCCTGAAGAAAAGCGAAACTGACGGGGCCCAAATTAGG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
AACTGGTTCGGATCCGATTCCTCACTACCACACCGCCCGATT----AACAAACCGCACTAGTAGGACACAATTATCTTAC
CCCGCAAAAAAAAGGACACAATTATCTTGGCAAATCGCATCCGACGGCCCGTATTCATCCTTACCCTCCAACTCGGCCCG
ACAGCCATCCATCCTTCCTCCTCGCCCTGCCTTTCCCTCCAAAAAATACTACTAGTACTAAAGCCCTGCCTCTACACCCA
CTGCCACAGAGACCCCGCCAAAACACGGGCCTGCATGCCACGGACCGAAGCAAAGAAAATCCCGTGGCGCACTTGATATT
CATTCCTGCCTTGCCTTCCCTAA-AAAAAATTGATATTGCTGCCACGTCGGTGTCCGCCGAGCTGAGAGTGAAACAAAGA
CAAAGAGAAGGAGAAAGCGAGAGGAGAGGCGGACGCGAGACGGGACTAGCGCCACTCCATTCCACTTCCCTCCCTCGCTT
GCCTTCCTTCCT--------ATCATAGCATTCCTAGATAGACAGATAGAAACCCCCGATTCTGATCGCCGGGATGAGGTT
CTGACCCCCGATTCGGTCCGTCGATTGTGATTTCCCCTCGATTTGGTGCGGGATTAGCGGCCGGAATTAATCGCCATGAC
GGCGGCGTCGCCGATGGTGCTGTCCCTCCTGCTCTTCGCCTCGCTCACGGCGCTGCTCGTCCTGGCCCCTCGCGCGTCGT
CGCCGCCGCTGCCGCTGCCGCTGCCCGTGGTGGTTGGGGACGAGGAGGCGCCGGCCGCCGCTGGGGGTGCTGCTGCGGGG
AGCAGCGGCGGGGGGGCGGGAGTTGAGGAGGGACCGGAGGACCTCGCGCTGTCCCGGCGCGTCACGCTCGACGCCGGCGA
GGGTGCGGCGGTAGCGTCCAAGGTGGCCTTCATGTTCCTGACCAACTCCGACCTCACCTTCGCGCCGCTTTGGGAGCGCT
TCTTCGCGGGGCACGCCCACCAGTTCAACGTCTACGTGCACGCAGACCCGGCGGTGAGGCTGCGGCACCCCCCTACGCCT
TCCTTCCGGGGCCGCTTCGTCGCGGCCAAGCCGACGCGGCGCGGGGACCCGAGCCTCATCGCTGCGGCGCGGCGGCTGCT
TGTCGCCGCGCTACTGGACGACCCGGCCAACGCCTACTTCGCACTGCTCTCGCAGCACTGCGTCCCGCTCCACTCCTTCC
CGCGGCTCTACGCGGCGCTCTTCCCGCC---CAAG---------GCCGCGCACCACCACCGCCTCCCTAGCTATATCGAG
GTGCTTACCGGCGAGCCCCAGATGCCCGCGCGCTACGTGGCGCGGGGTGACGACGCCATGCTCCCGGAGGTGCCCTTCGA
CCGGTTCCGCATCGGCTCCCAGTTCTTCACGCTGGCCCGCCGCCACGCCGTGCTAGTCGTCCGCGAGCGCCGTCTCTGGC
GAAAGTTTAGGGAGCCGTGCCTGCAGGAGTCGCAGGACTCTTGCTACCCGGAGGAGCACTATTTCCCGACGCTT-CTCGA
CATGGCCGACCCCGCCGGCTGCACCCGGTACACGCTCACGCGCGTCAACTGGACCGACAGCTTCGAGGGCCACCCGCACA
CGTATGCCGCGCCCGAGGTGTCGCCGCGGCTCGTCGCCGAGCTGCGCCAGTCCAACAGCTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCCGACTGCCTTGGCCCGCTCATGGCCATCGCCGACACCGTCATCTTCAAAGATTGATCGATGCG
GTGCTCTGCATCATAGCTACACGTAGGAGGTACGTTCTGACGCCTGATTTCTGTAATGTTTGAG-GGTTCTGGA---CAC
TACTTATTGGTT-ATGCTCGTTAGCCATGCATGTATTTC-AATCACA----AATTTGCAGCCCATAGATGATCGAAACAT
ATTGCAAATGTCATTTCACTCCCCAAATTTATTTAAGATGCTGCAAC---------------ATGACTGAAGAACACTGA
ATACTTTTTTATGGGAAAAATCTCCTATCTACTTTAGTTTCCATATGTAAGCATGTTGCTTCATTTAATTCGTGAAGAAA
TGGACAACTCGATTAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTGTCATATGCATGACACTAGTCTAAGTTACTAT
CTTCATAATGCAAAATAACATAATAGTAGTACTACCTCTCTCTCAGTTTACAGGGTGCGCGTGTATCCCTAGGTCGTCAA
TTTGACCAACCTAATACAAATCATATATTATAAAAAATATACCAACATAAAATTCGGAGTTTCTACTTTCAAAAGGTATA
ATTTTTGTGTTATATAGTTTATATTAGGGTGATAAAATTGGCAACCTAGGTATACGCGCAGGACTTGTAAACTGAAACGG
AGGTAGTATCATAGATGACTTTATTTATTAGCTCATAGACTCGTCTTGTCTTGGAAAGCGCTATGTTAGAGTAACATATT
ATGTTACCACCTCTCATTAATTACTTGCCACATAAGCAGAATTTTCTCGAAGTGTGCTACGTTACTAGCTAAGTTACTCC
CATTATAACTAGCCTTAGTCTTGTGCTCTCTCGATCGATGAGACCATGCGTGTACTCCCTCTGGTCCTTTTTACTCTGCA
TATTAGAATTCTCTGAAGTCAAACTTCATAAAGTTTGACTGTATTTATATGAAAAAATATATACATCTGCTATGCTAAAG
TTATATAATATGAAACGTTAAGTCATGACACATCTAGTAGTATTAATTTTAGATTGT
>chr2D_171
TAGTCCTAAGAGGATACG--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATACCATACAGATAGACACATGTGCCTCTCCTCTGCCCTGC---------CG
TGCATTCGGCGAGCCAGTTCGCAGCAAGCTTACCTACCCTGCTGATCTCAACATTGAATTCCTCGGTTGCTGGCAAAATT
CTCCGTGAGAAAGT--AGTATATCAATAC------TGCCTGAAGAAAAGCGAAACTGACGGGGCCCAAATTAGG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
AACTGGTTCGGATCCGATTCCCCACTACCACACCGCCCGTTT----AACAAACCGCACTAC-------------------
--------------GACACAATTATCTTGGCAAATCGCATCCGACGGCCCGTATTCATCCTTACCCTCAAACTCGGCCCG
ACAGCCATCCATCCTTCTTCCTCGCCCTGCCTTTCCCTCCAAAAAAAAAAA----TACTAAAGCCCTGCATCCACACCCA
CTGCCACAGAGACCCCACCAAACCACGGGCCTGCATGTCACGGACCGAAGCAAAGAAAATCCCGTGGCGCACTTGATAC-
---TCCTGCCTTGCCTTCCCTTAGAAAAACTTGATATTGCTGCCACGCCGGTGTCCGCCGAGCTGAGAGTGAAACAAAGA
CAAAGAGAAGGAGAAAGCGAGAGGAGAGGCGGACGCGAGACGGGACTAGCGCCACTCCATTCCACTTCCCTCCCTCGCTT
GCCTTCCTTCCTTCCTTCCTATCATAGCATTCCCAGATAGACAGATAGAAACCCCCGATTCTGATCGCCGGGATGAGGTT
CTGACCCCCGATTCGGTCCGTCGATTGTGATTTCCCCTCGATTTGGTGCGGGATTAGCGGCCGGAATTAATCGCCATGAC
TGCGTCGTCGCCGATGGTGCTGTCCCTCCTGCTCTTCGCCTCGCTCACGGCGCTGCTCGTCCTGGCCCCTCGCGCGTCGT
CGCCGCCGCTGCCGCTGCCGCTGCCCGTGGTGGTTGGGGACGAGGAGGCGCCGCCCGCCGCCGGGGGTGGTGCTGCGGGG
AGCAGCGGCGGTGGGGCGGGAGTTGAGGAGGGACCGGAGGACCTCGCGCTGTCCCGGCGCGTGACGCTCGACGCCAGCGA
GGGCGCGGCGGTAGCGTCCAAGGTGGCGTTCATGTTCCTGACCAACTCCGACCTCACCTTCGCGCCGCTTTGGGAGCGCT
TCTTCGCGGGGCACGCTGACCGGTTCAACGTCTACGTGCACGCAGACCCGGCGGTGCGGCTGCGGCTCCCCCCTACGCCT
TCCTTCCGGGGCCGCTTCGTCGCGGCTAAGCCGACGCGGCGCGGGGACCCGAGCCTCATCGCTGCGGCGCGGCGCCTGCT
TGTCGCCGCGCTACTCGACGACCCGGCCAACGCCTACTTCGCGCTGCTCTCGCAGCACTGCGTCCCGCTCCACTCCTTCC
CGCGTCTCTACGAGGCGCTCTTCCCGCC---CAAG---------GCCGCGCACCACCACCGCCTCCCGAGCTATATCGAG
GTGCTCGCCGGCGAGCCCCAGATGCCCGCGCGCTACGTGGCGCGCGGTGACGACGCCATGCTCCCGGAGGTGCCCTTCGA
CCGGTTCCGCATCGGCTCCCAGTTCTTCACGCTGGCCCGGCGCCACGCCGTGCTAGTCGTCCGCGAGCGCCGTCTCTGGC
GAAAGTTTAGGGAGCCGTGCCTGCCGGAGTCGCAGGACTCGTGCTACCCGGAGGAGCACTATTTCCCGACGCTT-CTCGA
CATGGCCGACCCCGCCGGCTGCACCCGGTACACGCTCACGCGCGTCAACTGGACCGACAGCTTCGAGGGCCACCCGCACA
CGTATGCCGCGCCAGAGGTGTCGCCGCGGCTTATCGCCGAGCTGCGCCAGTCCAACAGCTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCCGACTGCCTTGGCCCGCTCATGGCCATCGCCGACACCGTCATCTTCAAAGATTGATCGATGCG
GTGCTCTGCATCATAGCTACACGTAGGAGGTACGTTCTGACGCCTGATTTCTGTAATGTTTCAA-GGTTCTAGA---CAC
TACTTATTGGTT-ATGCTCGTGAGCCATGCATGTATTTC-AATCACA----AATTTGCAGCCCATAGATGATCGAAACAT
GTTGCAAATGTCATTTCACTCCCCAAATTCATTTAAGATGCTGCGAC---------------ATGACTGAAGAACACTGA
ATACTTTTTC-TGGGAAAAATCTCCTATCTACTTTAGTTTCCATATGTAAGCATGTTGCTTCGTTTAATTCGTGAAGAAA
TCGACAACTCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTAGTCTTGTGCTCTCTCGATCGATGAGATCATGCGTGTAC-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr2B_188
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATACCATACCGATAGACACATGCGCGTCTCCTCTGCCCTGC---------CG
TGCATTCGGCGAGCCAGTTCGCAGTGAGCTTACCTACCCTGCTGATCTCAACATTGAATTCCTCGGTTGCTGGCAAAATT
CTCCGTGAGAAAGT--GGTATATCAATACTGTACTTGCCTGAAGAAAAGCGAAACTGACGGGGCCCAAATTAGGGTGCGT
TTGGTTGCAAGGGCGGTAATGAATGGGTTGGGATCGTTCAGAAAATAGACATGTTTGGTTATAAAGCACATGAATGGTTC
GAGCCAAAAAAAGAGAATATGCCATGAAGATGCTGAACCGTTCCACCCAACCAAATCGGTCGAATCAAATGGCCGCCCTT
TGCATGCATGACTATGTGAGCATGACTGGTGGTCCCGTCCTAAATAATTAGCTCACCACTTATATTCAGCCAAACACATG
AATTGAATGGTTCAATCCCAAAAAAATTGAATGGTCCCAACCCATTCATACGACACATTCAACCAAACGCATCCTTAGGC
AACTGGTTCGGATCCGATTCCCCACTAACACACCGCCCGATTAACAAAGAAACCGCACTAG-------------------
--------------GACACAA-TATCTTGGCAAATCGCATCCGACGGCCCGTATTCATCCTTACCCTCAAACTCGGCCCG
ACAGCCATCCATCCGCCTTCCTCGCCCTGCCTTGCCCTCCAAAAGAAAAATAGTA--------------CTCCACACCCA
CTGCCACAGAGACCCCACCAAACCACGGGCCTGCATGTCACGGACCGAAGCAAAGAAAATCCCGTGGCGCACTTGATATT
CATTCCTGCCTTGCCTCCCTAAA-AAAAACTTGATATTGCTGCCACGTCGGTGTCCGCCGAGCTGAGAGTGAAACAAAGA
CAAAGAGAAGGAGAAAGCGATAGGAGAGGCGGACGCGAGACGGGACTAGCGCCACTCCATTCCACTTCCCTCCCTCGCTT
GCCTTCCTTCCTTCCTTCCTAGCGTAGCATTCCCT---------ATAGAAACCCTCGATTCTGATCGCCGGGATGAGGTT
CTGACCCCCGATTCGGTCCGTCGATTGTGATTTCCCCTCGATTTCGTGCGGGATTAGTGGCCGGAATTAATCGCCATGAC
GGCGTCGTCGCCGATGGTGCTGTCCCTCCTGCTCTTCGCCTCGCTCACGGCGCTGCTCGTCCTGGCCCCTCGCACGGCGT
CGCCG------CCGCTGCCGCTGGCCGTGGTGGTTGGGGACGAGGAGGCGCCGCCGGCCGCCGCTGGTGCTGCTGCGGGG
ATCAGCGGCGGAGGGGCGGGAGTTGAGGAGGGACCGGAGGACCTCGCGCTATACCGGCGCGTGACGCTCGACGCCGGCGA
GGGCGCGGCGGTGGCGTCCAAGGTGGCGTTCATGTTCCTGACCAACTCCGACCTCACCTTCGCGCCGCTTTGGGAGCGCT
TCTTCGCGGGGCACGCTGACCAGTTCAACGTCTACGTGCACGCAGACCCGGCGGTGCGGCTGCGGCTCCCCCCTACGCCT
TCCTTCCGGGGCCGCTTCGTCGCGGCCAAGCCGACGCGGCGCGGGGACCCGAGCCTCATCGCTGCGGCGCGGCGGCTGCT
TGTCGCCGCGCTACTCGACGACCCGGCCAACGCCTACTTCGCGCTGCTCTCGCAGCACTGCGTCCCGCTCCACTCCTTCC
CGCGGCTCTACGAGGCGCTCTTCCCGCC---CAAG---------GCCGCGCACCACCACCGCCTCCCGAGCTATATCGAG
GTGCTCACCGGCGAGCCCCAGATGCCCGCGCGCTACGTGGCGCGCGGTGACGACGCCATGCTCCCGGAGGTGCCCTTCGA
CCGGTTCCGCATCGGCTCCCAGTTCTTCACGCTGGCCCGCCGCCACGCCGTGCTAGTCGTCCGCGAGCGCCGTCTCTGGC
GAAAGTTTAGGGAGCCGTGCCTGCCGGAGTCGCAGGGCTCGTGCTACCCGGAGGAGCACTATTTCCCGACGCTT-CTCGA
CATGGCCGACCCCGCCGGCTGCACCCGGTACACGCTCACGCGCGTCAACTGGACCGACAGCTTCGAGGGCCACCCGCACA
CGTATTCCGCGCCAGAGGTGTCGCCGCGGCTCATCGCCGAGCTACGCCAGTCCAACAGCTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCCGACTGCCTTGGCCCGCTCATGGCCATCGCCGACACCGTCATCTTCAAAGATTGATCGATGCG
GTGCTCTGCATCATAGATACACGTAGGAGGTACGTTCTGACGCCTGATTTCTGTAACGTTTCAA-GGTTCTAGA---CAC
TACTGATTGGTT-ATGCTCGTGAGCCATGCGTGTATTTC-AATCACAAAATAATTTGCAGCCCGTAGATGATCGAAACAT
ATTGCAAATGTCATTTCACTCCCCAAATTCATTTAAGATGCTGCAAC---------------ATGACTGAAGAACACTGA
GTACTTCTTC-TGGGAAAAATCTCCTATCTACTTTAGTTTCCATATGTAAGCATGTTGCTTCGTTTAATTCGAGACGAAA
TCGACAACTCGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTAGTCTTGT--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5B_1263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CCAAGGTGGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTTCGCGCCGCTCTGGGAGAAGT
TCTTCGCGGGGCACCACGGCCTGCTCAACCTCTACGTCCACGCCGACCCCGCCGCCAACCTCACGCTGCCGCCGACCCCG
TCCTTCCGCGGCCGCGTCATCCGGGGCAAGGCCACGGCGCGCGCCTCCGCCACGCTCATCTCCGCGGCGCGCCGCCTCCT
CGCCACCGCGCTCCTCGACGACCCGGCCAACCGCTTCTTCGCGCTGCTCTCCCAGTCCTGCGTCCCGCTCCTCCCGTTCC
CCGCCCTCTACCGCACCCTCCTCACCGACAACAATGCCGCCGGCGCCGGCCGCCACCGCCGCCACCGCAGCTTCATTGAG
ATCCTGGACAGCGAGCCCACGCTGCACGCCCGCTACTACGCGCGCGGCGACAACGTGATGCTCCCGGAGGTGCCCTTCGA
CCGCTTCCGCGTCGGCTCCCAGTTCTTCGTGCTCGCCAGGCGGCACGCCGTCATGGTGGTCCGGGACCGGCGGCTCTGGA
ACAAGTTCAAGGCGCCGTGCCTCGTCAAGGAGAAGGACTCGTGCTACCCGGAGGAGCACTACTTCCCGACGCT-GCTCGA
CATGCAGGACCCCGACGGCTGCACCAAGTACACCCTCACCAGGGTCAACTGGACCGACGCCGTCGGCGGCCACCCGCACA
CCTACCAGCCGGAGGAGGTCTCCGGGGACCTCATCAGGGAGCTCAGGAAGTCCAACGGCACCTACTCC---CACATGTTC
GCGCGCAAGTTCGCGCCCGAGACCCTTGCGCCGCTCATGGAGATCTCCGACTCCGTCATC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr5D_1263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CCAAGGTGGCCTTCCTCTTCCTCACCAACTCCGACCTCGTCTTCGCGCCGCTCTGGGAGAAGT
TCTTCGCGGGGCACCACGGCCTCCTCAACCTCTACGTCCACGCCGACCCCGCCGCCAACCTCACGCTGCCGCCGACCCCC
TCCTTCCGCGGCCGCATCATCCGGGGCAAGGCCACGGCGCGCGCCTCCGCCACGCTCATCTCCGCCGCGCGCCGCCTCCT
CGCCACCGCGCTGCTCGACGACCCGGCCAACCAATTCTTCGCGCTGCTCTCCCAGTCCTGCGTCCCGCTCCTCCCGTTCC
CCGCCCTCTACCGCACCCTCCTCACCGACAACAAT---------GCCGGCCGCCACCGCCGCCACCGCAGCTTCATCGAG
ATCCTGGACAGCGAGCCCACGCTGCACGCCCGCTACTACGCGCGCGGCGACAACGTGATGCTCCCGGAGGTGCCCTTCGA
CCGCTTCCGCGTCGGCTCCCAGTTCTTCGTGCTCGCCAGGAGGCACGCCGTCATGGTGGTCAGGGACAGGCGGCTCTGGA
ACAAGTTCAAGGCGCCGTGCCTCGTCAAGGAGAAGGACTCGTGCTACCCGGAGGAGCACTACTTCCCGACGCT-GCTCGA
CATGCAGGACCCCGACGGCTGCACCAAGTACACGCTCACCAGGGTCAACTGGACCGACGCCGTCGGCGGCCACCCGCACA
CCTACCAGCCGGAGGAGGTCTCCGGGGACCTCATCAGGGAGCTCAGGAAGTCCAACGGGACCTACTCC---CACATGTTC
GCGCGCAAGTTCGCGCCCGAGACCCTTGCGCCGCTCATGGAGATCGCCGACTCCGTCATC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr6A_1770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTTCCGCGAGCGCTGTCTTTGGC
AAAATTTTAGTGAGCAATGCCTGCCGGAGTCACAGGACTCCTGCTACCCGGAGGAGCAATATTTACGGACACC-GCTCGA
CGTGGCCGACCCCGCCGGCTGCACCTGGTACACGCTCACGCGCATCAACTATACTGACAGTGTCGACGGCGACCCATAGA
CTTATGGCGTGCCAGAGGTGTCGCTGTTGCTCACCGTCGAGCTGCATCAGTCCAACAACTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCTGACTGCCTTGGCCCGCTCATGGTCATCGCAGACACTGTCATCTTCAAAGATTGATCGATGTC
TTTCTCTGCACCATAGCTGCACGTAGGAGGTACATTGTGGCACCTTATTTCTGAAAAGTTTCAGAGATTCTAGACATCAC
TTCTTCTTGTTA-GTGCTCGTGAGGCATGCATGCCATGTTAATCACA----AATTTGCAGCTGATAGATGGTCGAAACAT
ATTGGGAATGACACTTCACTCCCTGAATTCGTTTGAGATGCTGCAGCTTCTTATGAGACAAGATGACTGAAGAACACTGA
ATACTTAATT-TGGGAAAA-TCTCCTATCTGATTTAGTTTCCGAATGTAAGCATGTTGCTTCATGTAAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr2D_1773
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TCCGCGAGCGCTGTCTCTGGC
AAAAGTTTAGTGAGCAGTGCCTGCCGGAGTCGCAGGACTCCTGCTACCCGGAGGAGCAATATTTACGGACACCAGCTCGA
CGTGGCCGACCCCGCCGGCTGCACCTGGTACACGCTCATGCGCATCAACTATACTGACAGTGTTGACGGCGACCCACAGA
CTTATGGCGTGCCAGAGGTGTCGCTGCTGCTCACCGCCGAGCTACGTCAGTCCAACAACTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGCCTGACTGCCTTGGCCCGCTCATGGTCATCGCAGACATTGTCATCTTCAAAGATTGATCGATGTC
TTTCTCTGCACCATAGCTGCATGTAGGAGGTACGTTCTAGCACCTTATTTCTGAAAAGTTTCAGAGGTTCTAGACATCAC
TTCTTCTTGTTTAATGCTCGTGAGCCATGCATGCCATGTTAATCACA----AATTTGCAGCCGATAGATGGTGAAAACAT
ATTGCGAATGTCACTTCACTCCCTGAATTCGTTTGAGATGCTGCAGCATCTTATGAGACAAGATGACTGAAGAACACTGA
ATACTTAATT-TGCGAAAA-TCTCCTACCTGATTTAGTTTCCGAATGTAAGCATGTTGCTTCATGTAATTAGTGAATAAA
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr3B_1826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CAGGACTCCTGCTATCCGGAGGAGCAATATTTACGGACACC-GCTCGA
CGTGGCCGACCCCGCCGGCTGCACCTGGTACACGCTCACGCGCATCAACTATACTGACGGTGTCGACGACGACCCACAGA
CTTATG-CGCGCCAGAGGTGTCGCTGCTGCTCACCGCCGAGTTGCGTCAGTCCAACAACTCCACCTATGAGCACATGTTC
GCGCGCAAGTTCGCGACTGACTGCCTTGGCCCTCTCATGGTCATTGTAGACACAGCCATCTTCAAAGATTGACCGATGTG
TTTCTCTGCACCATAGCTGCACGTAGGATGTATGTTCTGGTACCTTATTTTTAAAAAGTTTCAGAGGTTCTAGACATCAC
TTCTTGTTGTTT---------------TGCATGCCATGTTAATCACA----ATTTTGCAGCCGATAGATGGTTGAAACAT
ATTGCGAATGTCACTTCACTCCCCGAATTCGTTTGAGATGATGCAGCATCTTATGAGACAAGATGACTGAAGAACACTGA
ATACTTTA-T-TGGGAAAA-TCTCCTACCTGATTTAGTTTCGGAGTGTAAGCATGTTGCTTCATGTAATTAGTGAAGAAA
TCGGCAACT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
SS-SSS--SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------------S---------------------SSSSSSSSS--
--------S----S--S------------------------S-------------------S------------------
--------SS--SSSS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------------------------------------------------------S-----------
-----------------S----------------------------S-SS-SSSS-----------------S-------
----------------S-----S--------------S------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
-----------------------------------------------------S-------S------------------
-----------S--------------------------------------------------S-----------------
---S----------------------------------------------------------------------------
-----------------S------------------------------------------------S-------------
--------------------------------------------------------------------------------
---------------S--------------------------S-------------------------------------
------------S------------------------------------------------------S------------
-----S--------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
------------------------S---------------S---------------------------------------
--------------------------------------------------------------------------------
-------------S------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S---------S--------
---------------------S----------------------------------------------------------
-----------------------------S--------------------------------------------------
----------S---------------------------------------------------------------------
-S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACG
TGCATTCGACGAGTCAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2201
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTGCTACCCGGAGGAGCA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_898
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CG
ACAGCCATCCATCCTTCC--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTTACAGGGTGCGCGTGTAT--------------
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