>input_sequence_60555
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----------------------------------------------------------------------ATGGCCAGGT
TGATGGTCGTCATCGGCCTCATGGCCAGCGTCCTCGCCCTCCCCGGCCTTTTCCATTCCGGCCTTCGACGCCTGGGCCAG
CCAAGCATCATCTCGCACATCCTGGTACGTTCGTATAGTATATATCTTGGCAGCTCCGATCCATCCATCGATCACCCTAT
TAGCACTTGATTTGTCGTGCTAATGGAGTAATGGATGCAGGCTGGCGTGGTGGTCGGCCCGACGGTGCTTGGCCGCGTGG
TCAACCTCCGTCCGCTAGGCATGGAGGACGCCGGCATGGCGCTGGACGACGCCATCTACTTCCTCCGCGTCGTGTTCATG
TTCTTCACCGGGCTGGAGATGGACTTGTGTTACATGCGGCGCTACTTGCGTGCCTCCCTCGTCCTCGCCTGCGGCGGCTC
CGCGCTGTGCCTCCTGCTCGCTGCCGTCGGCGGGCTATTCTTCTATGGCCTTCTGCACCCATGGAAGGAGACCTTCTACC
CAGAGGGCATCTACGCTTCCACCGCTCTCTTCATGCTCGTCCTCACCAGCACCGCCTCGCCCGTCCTCATCCACATCGTC
ACGGAGCTCAAGCTCACCGGCTCCGAGACCGGCCAGCTCGCCATGGGCACCGCCTTCGCCAATGACATAGTCAGCCTCAC
CGTCGTCAGTATCATGGACGTCGACTGGACCACCTATGACAAGGATGGCAAGGCCAAGCCACCGCCTGGCGGCCTTCAAG
TGCAGCCGATCGCAAAGCCGATCATCTTCCTCTTCCTGTCGCTCAACATCTGGATCGCCATTCGTTTGGTGGTGTGGCTG
GTCAGGCTGCTCAACAGGGCTAAGAAGGGGCGGCAATACATCAGGAGGTCCAAGCAATCATACAA-GCATGACACCGAGA
TTTATTATCAAGGTTCACCATCATGGCTACATCCCCGGGGCCTGATTACGGGCGCTCCTCCCTGTGACACCGTCACAATA
CCGCACCTTGGCCGCCCGGGCACCGGCACACGCCGCCGGCTTCCTCGCATGCCT-GTGCTATTATGTTGGCATAGGTTAC
ATCATGTGTCTACCCC-CGATATATATGAGTGGCCTAAGATACAGGTGTCCTATTAG-----------------------
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---------------------------
>chr1A_1_TraesCS1A01G120600
AGCCTGCCATATATAGAAATGTGTGGTGCGCTAAGGTTAAAGTTAGAACGTTCACTCGAGACGCGGCTGTTCTAATCCGG
A---------AGCTCGGATGAATAGTAAATAAAAAA-TAGTAGAAATAACAATTAAAAAATTCTGAATTTCTTTTATGTG
AAACATTGACAAAAAAAATTGTTGGCTTGCAGAATTGCATCATCATATGACATTCGTGGAAATCGTGGCAAAAAAAATTG
ATGCTCCAAAATGTCATATGCATTTTGGAGCATCGATATTTTTTGGCCACGTTTTCCACAAATGTCATTTCATGATGAAA
TTTTGCAAGTTATGAAAACATTTGCCAACGTTTCACATAAAAAATTCAAATTTTTTTGAATTCTTTTTTGTTATTTATTT
ATTTTACTGTTCACCCGAGGTCACATGAGCTTGGCTTAGAATAGCACTTCGGCGTTCACTCGCTGACTTTTCCACTTAAT
TACGAGGAAAGTAGCACCGATATTTAGCAGCACCCACTTGTAGACAACCATTGATCGTCCATTGAGGATGCAAGATGGAA
CTAACTACGGATTGGCTGCCCATAATTGGTCTATATATTTTTAGAATGGACATATTTGTCTTGTGGGGCTACGCA----C
TCTGGTAGAAAGCCAAACAAATACTTGTGGGGAGAGGCTCTTGTTAATTGAT---------------CATTAAACTAGTT
AGATTTGTTCACCGATCACGTACGTCACCGGACAAATCAAGAAGAAGCACCCAACCTACCCACCTAGCTAGCTCATGAAC
AACATACTCTCTTCGTTTGGAATTACTTATCGCAAAAATGAATATATCTAAAACAAGATACATCCATTTCTGCGACAAAT
GATTCTAAACAGAGGGAGTATAGAGCAAAGTAGCTCATCGGCGGAGGCCTGTCTGGCCGGTCGGCGACCCAAGACGAAGA
GACCCTGCAAGATATGACAGAGGGCGATGGCGGCAAGTGCCCGG-CGACGTTCTCCAGGGGTCCTACTTCATGGCCAGGT
TGATGGTCGTCATCGGCCTCATGGCCAGCGTCCTCGCCCTCCCCGGCCTTTTCCATTCCGGCCTTCGACGCCTGGGCCAG
CCAAGCATCATCTCGCACATCCTGGTACGTTCGTATAGTATATATCTTGGCAGCTCCGATCCATCCATCGATCACCCTAT
TAGCACTTGATTTGTCGTGCTAATGGAGTAATGGATGCAGGCTGGCGTGGTGGTCGGCCCGACGGTGCTTGGCCGCGTGG
TCAACCTCCGTCCGCTAGGCATGGAGGACGCCGGCATGGCGCTGGACGACGCCATCTACTTCCTCCGCGTCGTGTTCATG
TTCTTCACCGGGCTGGAGATGGACTTGTGTTACATGCGGCGCTACTTGCGTGCCTCCCTCGTCCTCGCCTGCGGCGGCTC
CGCGCTGTGCCTCCTGCTCGCTGCCGTCGGCGGGCTATTCTTCTATGGCCTTCTGCACCCATGGAAGGAGACCTTCTACC
CAGAGGGCATCTACGCTTCCACCGCTCTCTTCATGCTCGTCCTCACCAGCACCGCCTCGCCCGTCCTCATCCACATCGTC
ACGGAGCTCAAGCTCACCGGCTCCGAGACCGGCCAGCTCGCCATGGGCACCGCCTTCGCCAATGACATAGTCAGCCTCAC
CGTCGTCAGTATCATGGACGTCGACTGGACCACCTATGACAAGGATGGCAAGGCCAAGCCACCGCCTGGCGGCCTTCAAG
TGCAGCCGATCGCAAAGCCGATCATCTTCCTCTTCCTGTCGCTCAACATCTGGATCGCCATTCGTTTGGTGGTGTGGCTG
GTCAGGCTGCTCAACAGGGCTAAGAAGGGGCGGCAATACATCAGGAGGTCCAAGCAATCATACAA-GCATGACACCGAGA
TTTATTATCAAGGTTCACCATCATGGCTACATCCCCGGGGCCTGATTACGGGCGCTCCTCCCTGTGACACCGTCACAATA
CCGCACCTTGGCCGCCCGGGCACCGGCACACGCCGCCGGCTTCCTCGCATGCCT-GTGCTATTATGTTGGCATAGGTTAC
ATCATGTGTCTA-CCCCCGATATATATGAGTGGCCTAAGATACAGGTGTCCTATTAGAACACAACTCC-TACCCTATATG
--CACAGTCTAAAACCAAGTCCAATTGTAACCTATCTTGTACAATAATATTCGACACAACTCTAACAAACTCCACTTTGG
CGAATATTCTCCACCATCTTGAATTCATCCATGCGTCGAACCTCCATGTACATTGGACTTGAGATACGCCATGGATACCT
CTGCTACTTCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACGCTCGAGC-AA
AAATTAAGTTCCTCATTACTCTACTTTGTGCTCCCAATTTCCGGAGAATCCGTTCAACGTCATTACACACCGAACATTG-
TCTGCGTG-AAAATGAACAACTCACATATTAGACGCCACTTATAAGAGTTATCTGAACTCAACATCACTGCTCTTTCTTG
ACCGCATGTCTGAAACTTG-AAAGAATTTCACCGTCGCCCTGTGTCACCCTGAGTCAAATTCACAGTTGTCTCATCCTTT
TTTTCCCGGATAGTCTCTGACATGTCCCACAGCTATAGCACTCAACCTCCTTCTGTACTTATCACCCGCACTTTG-CATG
TGCACCGAACACCACAAAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTCCAAACTCTCTGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCTTCCGGTACCGATAGACTCAGTCACCAACTTGAATCTGGTACTCGTCAACACTGC
TTCAGCACCCTTTGCACAATTTTGTCTGACTACATGTCT-ACTATTAGTGCCTTGGTCTGTCACTGTGTCCCGTGCTTAC
CGCACGCCTCGCCGCTATTACCGCGTCGAGCCTCTGCTATCCTGGTCGAGTCTCCCGGATAGCTAGCCCCCACTGCCTTA
AACCC-CACTGCAGAGAACCACCGATTATCACCGACCGATGCCGAGTATCACGTCTTCATCAGATCACTGGTACCCAGTC
TGAACCACGTGTCTCTCACCTTCCCGC
>chr1D_27
TGCACTAACT--------------------------TTAAAGTTAGAACGTTCACTTGAGACGCGGCTGTTCTAATCCCG
AGCTCATGTGAGCTCGGATGAACATTAAATAAAAAAATAGTAGAAATAAAAATTAAAAAATTCTGAATTTCTATTATGTG
AAACATTGACAAAAAGAATTGTTGGCTTGCAAAATTGCATCATCGCATGACATTCGTGGAAATCGTGGCAAAAAAAATCG
AA-----------------GCATTTTGGAGCATCGATTTTTTTA--CCACATTTTCCACAAATGTCATTTCATGATGAAA
TTTTGTAAGCTATGAAAACATCTGTCAATGTTTCACATAAAAAATAGAATTTTCTGATATA-----------------TT
TTTTTACTGTTCACCCGAG-TCACATTAGCTTCGCTTAGAATAGAACTTTCGCGTTCACTCGCTAACTTTTCCACTTATT
TACGAGGAAAGTAGCACCGATATTTAGCAGCACCCACTTGTAGACAACCATTGATCGTCCATTGAGGATGCAAGATGGAA
CTACATACGGATTGGCTGCCCATAATTGGTCTATATATTTTTAGAATGGACATATTTGTCTTGTGGGGGTACGCATAAGC
TCTGGTAGAAAGCCAAACAAATACTAGTGGGGAGAGGCTCTTGTTAATTGATTTAGTTGTAACAACTCATTAAACTAGTT
AGATTTGTTCATCGATCACGTACGTCACCGCACAAATCAAGA----GCGCCCAACCTACCCACCCACCTAGCTCATGAGC
AACATA--------------------------------------------------------------------------
--------------------TATAGCAAACTAGCTCATCGGCGGAGGCCTGTCTGGCCGGCCGGCGACCGAAGACGAAGA
GACCCTGCGAGATCTGGCGGAGGGCGATGGCGGCAAGTGCCCCGCCGACGTTCTCCAGGGGTCCTACTTCATG-------
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>chr1A_1855
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--------------------------------------------GAGGACCAAGCAATCACATGA-GCACGACACCAAGA
TTTGTTAACGAGGTTCATCATCATGGCTACATCCCCGGGGCCTGACTACAGGCGCTCCTTCCCGTGACACCGTCACAATA
CCGCACCCCGGCCGCCCAGGCGCCGGCACACGCCGCCGGCTCCCCCGCTTGCCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTACCCC-TGATATATACGAGAGGCCTAGGATACAAGTGTCCTATTAGGACACAACTCC-TACCCTGTATA
CACACAGTCCAAAACCAAGTCCAATTGTAACCTACCTTGTACAATAATATTCGACACAACTCTAACAAACTCCACCTTGG
CGAATATTCTTCACCACCTTGAATTCATCCATGCGTCGAACCTCCATGTACATTGGACTTGAGATACGCCATGAGTACTG
CTGCTACTCCCAGACTCTATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACAGTCAAGC-AA
AAATTAAGTTCCTCATTACTCTACTTTGTGCTCCCAATTTCCGGAGAATCCGTTTAACGTCATCACACACCGAACACTG-
TCTGCATG-AAAATGAATAACTCACATATTAGACGCCACATATAAGAGTTACCTAAACTCAACATCACCGCTCTTTCTTG
ACCGCATGTCTGAAACTTG-AAA-AATTTCACCGTCGCCCTGTGTCATCCTGAGTCAAATTCACAGCTGTCTCATCCTTT
TT-TCCCGGATAGTCTCTGGCATGTCCCACAGCTATAGCACTCCACCTCCTTCTGT-CTTGTCATCCGCACTTTGCCATG
TGCACCGAACACCACCAAATATACGGTCATGTACTCTCTCAGCTTTTGACAATTCCAGACTCTCCGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCTTCCGGTACCGATAGACCCAGTCACCAACTTGAATCTGGTACTCGTCAACACTGC
TTCAGCACCCTTTGCACAATTTTGTCTGACTACATGTCT-ACCATTAGTGCCTTGGTCTGTCGTTGTGTCCCATGCTTAC
CGCAGGCCTCGCCGCTATTACCGCGTCGAGCCTTTGCTGTCCTGGTCGAGTCTCCTGGGTAGCTAGCCCCCACTGCCTCA
ATCCC-CACTACAGAGAACCAACGATCATCATCGACCGATGCCGAGTATCACATCTTCATCAGACCACTGGTACCCACTC
CGATCCACATGTCTCTC----------
>chr1A_1855
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--------------------------------------------GAGGACCAAGCAATCACACGA-GCACGACACCAAGA
TTTGTTAACGAGGTTCATCATCATGGCTACATCCCCGGGGCCTGACTACAGGCACTCCTTCCCGTGACACCGTCACAATA
CCGCACCCCGGCCGCCCAGGCGCCGGCACACGCTGCCGGCTCCCCCGCGTGCCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTACCCC-CAATATATACGAGAGGCCTAGGATACAAGTGTCCTATTAGGACACAACTCC-TACCCTGTATA
CACACAGTCCAAAACCAAGTCCAATTGTAACCTACCTTGTACAATAATATTCGACACAACTCTAACAAACTCCACCTTGG
CGAATATTCTTCACCACCTTGAATTCATCCATGCGTCGAACCTCCATGTACATTGGACTTGAGATACGCCATGAGTACTG
CTGCTACTCCCAGACTCTATGTGACTCCACCTGCATCTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACACTCAAGC-AA
AAATTAAGTTCCTCATTACTCTACTTTGTGCTCCCAATTTCCGGAGAATCCGTTTAACGTCATCACACACCAAACACTG-
TCTGCATG-AAAATGAATAACTCACATATTAGACGCCACATATAAGAGTTACCTGAACTCAACATCATCGCTCTTTCTTG
ACCGCATGTCTGAAACTTG-AAA-AATTTCACCGTCGCCCTGTGTCATCCTGAGTCAAATTCACAGTTGTCTCATCCTTT
TT-TCCCGGATAGTCTCTGGCATGTCCCACAGCTATAGCACTCCACCTCCTTCTGT-CTTGTCATCCGCACTTTGCCATG
TGCACCGAACACCACCGAATATACGGTCATGTACTCTCTCAGCTTTTGACAATTCCAGACTCTCCGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCTTCCGGTACCGATAGACCCAGTCACCAACTTGAATCGGGTACTCATCAACACTGC
TTCAGCACCCTTTGCACAATTTTGTCTGACTACATGTCT-ACCATTAGTGCCTTGGTCTGTCGTTGTGTCCCATGCTTAC
CGTAGGCCTCGCCGCTATTACCGCGTCGAGCCTTTGCTGTCCTGGTCGAGTCTCCTGGGTAGCTAGCCCCCACTGCCTCA
ACCCC-CACTACAGAGAACCACCGATCATCATCGACCGATGCCGAGTATCACATCTTCATCAGACCACTGGTACCCACTC
CGATCCACATGTCTCTC----------
>chr4A_1855
GAGGACCA------------------------------------------------------------------------
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---------------------------------------------------AAGCAATCACACAA-GCATAACACCGAGA
TTTGTTAACGAGGTTCATCGATATGGCTACATCCCCGGGGCCTGACTACGGGCGCTCCTCCCCGTGACACCGTCACAATA
CCGCACCCCGGCCGCCCGGGCGCCGGCACACGCCACCGGCTCCCCCGCGTGCCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTACCCC-CGATATATATGAGAGGCCTAGGATACAAGTGTCCTATTAGGACACAACTCC-TACCCTGTATA
CACACAGTCCAAAACCAAGTCCAATTGTAACCTACCTTGTACAATAATATTCGACATAATTCTAACAAAGTCCACCTTGG
CGAATATTCTCCACCACCTTGAATTCATCCGTGCGTCGAACCTTCATGTACA-TGGACTTGAGATACACCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACACTCGAGC-AA
AAATTAAGTTCCTCATTACTTTACTTTGTGCTCCCAATTTCCGGAGAATCCGTTCAACGTCATCACACACCGAATACTG-
TCTGCGTG-AAAATGAACAACTCACATATTAGACGCCACATATAAGAGTTATCTGAACTCAACATCACCGCTCTTTCTTG
ACTGCTTGTCTGAAACTTG-AAGGAATTTCACCGTCACCTTGTGTCACCCTCAGTCAAATTCACAGTTGTCTCA--TCCT
TTTT-TCGGATAGTCTCTGACTTGTCCCATCGCTATAGCATTCCGCCTCCTTCTGC-CTTGTCATCCGCACTTTGCCATG
TGCACTGAACACCACAGAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTTTAGACTTTCCGCCACTTTCTCAGAT
TCTCCATGGTCAACTCCTATCCATCAACTAGCACCGATAGACCCAGTCACCAACTTGAATCCAGTACTCGTCAACACTGC
TTCAGCACCCTTGCACAC--TTTGTCTGATCACACGTATGACCACCAGTGCCTTGGTCTGTCGCTGTGTCCCGTGCTTAC
CGCACGCCTCGCCGCTATCACCGCGTCGAGCCTTTGCTGTCCTGGTCGAGTCTCCCGGGTAGCTAGCCCACACTGCCTCA
ACCCCCCACTGCAGAGAACCATCGATCATCACCGACCGATGCCGAGTATCACGCCTCCATCAGACCATTGGTACCCAATC
CGATCCACGTGTCTCTCGCTATCCCGC
>chr7A_1855
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--------------------------------------------GAGGACCAAGCAATCACACAA-GCACGACACCGAGA
TTTGTTAATGAGGTTCACCATCATGGCTACATCCCCAGGGCCTGACTACGGGCGCTCCTCCCCGTGACACAGTCACAATA
CCGCACCTCGGCCGCCCGGGCACCGGCATACGCCGCCGGCTCCCCCGCATGTCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTA-GCCCCACTATATATGAGAGGCCTAGGATACAAGTGTCCTACTAGGACACGACTCCATATCCTATCTA
AACACAATACAACTACAAGTCCAACTGTAACCTAACTCGTACACT-ATATTCGACACAACTCCAACAAACTCCACATTGG
CGAATATTCTCCACCACCTTGGATTCATTCATGCGTCGAACCTCCATGTACATTGGACTTGAGATACGCCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCATCACAGTCAACACTCGAGCAAA
AAATTAAGTTCCTCGTTACTCTACTTTGTGCTCCCAACTTCCGGAGTATCCGCTCAACGCCATCACACACTGGTCATTAA
TCTGCGTG-AAAATGAACAACTCACATATTGGGTGTCACATATAAGAGTTACCTGAACTCAACATCACCGCTCTTTCATG
ACCGTCTGTCTGAAACTTG-AAGGAATTTCACCGTCGCTCTGTGTCACTTTGAGTCAAATTCACAGTTGTCTCA--CTCT
TTTCCCCGGATAGTCTCTGACATGTCCCACAGCTATAGCACTCAACCTCCTTCTGTACTTGTCACCCGCACTTTGCCATG
TGCACTGAACATCATAGAATATACGGCCATGTACTCTCTCCGCTTTTGACAATTCCAGACTCTCCGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCTTCCGGCACCGATAGACCCAGTCACCAACTTGAATCCGGTACTCGTCAACACTGC
TTCAGCACCCCTGCACAA--TTTGTCTGACCACATGTCT-ACCATTAGTGCCTTCGTCTGTCGCTGTGTCCCGTGCTTAC
CGCACGCCTCGCCGCTATCACCGCGTCAAGCCTCTGCTGTCCTGGTCGAGTCTCCCGGGTAGCTAGCCCACACTGCCTCA
A-CCCCCACTGCAAAGAACCATCGATCATCACCGACCGATGGCGAGTATCACACCTTCATCAGACCACTGGTACCTAGTC
TGAACCATGTGTTTCTCGCCTTCCCGC
>chr2A_1855
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--------------------------------------------GAGGACCAAGCAATCACACAA-GCACGACACCGAGA
TTTGTTAACGAGGTTCACCGATATGGCTACATCCCCGGGGCATGACTACGGGCGCTCCTTCCCATGACACCGTCACAATA
CCGCACCCTGGCCGCCCGGGCGCCAGCACACGCCGCCGGCTCCCCCGCGTGCCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTAGCCC-CGCTATATATGAGAGGCCTAGGATACAAGTGTCCTACTTGGACACGACTCC-TACCCTGTCTA
CACACAGTCCCAAACCAAGTCCAACTGTAACCTACCTTATACAATAATATTCGACACAATTCTAACAAACTCCACATTGG
CGAATATTCTCCACCATCTTGAGTTCGTCCGTGCGTCAAACATTCATGTACATTGGACTTGAGATACGTCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCATCACAGTCAACACTCGAGCAAA
AA-TTAAGTTCCTCGTTACTCTACTTTGTGCTCCCAACTTCCGAAGAATCCGTTCAACACCATCACACACCAACCATTG-
TCTGCATG-AAAATGAACAACTCACATATTGGACGTCAAATATAAGAGTTACCTGAACTCAACGTCACCGCTCTTTCTTG
ACTGCTTGTCTGAACCTTG-AAGGAATTTCACCGTCACCTTGTGTCACCCTGAGTCAAATTCGCAGTTGTCTCA--CCCT
TCTT-CCGGATAGTCTCTGACATGTCCCACCGCTATAGCACTCCGCCTCCTTCTGTATTTGTCATCCGCACTTTGCCATG
TGCACTGAACACCACAAAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTCCAGACTCTCCGTCACTTTCTCAGAT
TCTTCATGGTCAACTCATGTCCATCTTCTGGTACCGATAGACCCAGTCACCAACTTGAATCTGGTACTCGTCAACACTGC
TTCAGCACCCTTTGCACAATTTTGTCTGACCACATGTCT-ACCATTAGTGCCTTGGTCTGTCGCTGTGTCCCGTGCTTAC
CGCACGCCTCGCCGCTATCACCGCGTTGAGACTCTGCTGTCCTGGTCGAGTCTCCCGGGTAGCTTGCCCACACTGCCTCA
A-CCCCCACTGCAGAGAACCATCGATCATCACCGACCGATGCCGAGTATCACGTCTCCATCAGACCATTGGGCCCCAGTC
CGATCCACGTGTCTCTCGCTATCCCGC
>chr7B_1855
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--------------------------------------------GAGGACCAAGCGATCACACGAGGCACGACACCGAGA
TTTGTTAACGAGGTTCACCGATATGGCTACATCCCCGGGGCATGACTACGGACGCTCCTCCCCGTGACACCGTCACAATA
CCGCACTCTGGCCGCCCGGGCGCCGGCACACGCCGCCGGCTCCCCCGCGTGCCC-GTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTA-CCC-CGCTATATAAGAGAGGCCTAGGATACAAGTGTCCTATTAGGACACAACTCC-TACCCTATCTA
CACACAGTCCAAAACCAAGTCCAACTGTAACCTACCTTGTACAATAATATTCGACACAACTCTAACAAACCCCACCTTGG
CGAATATTCTCCACCACCTTGAATTCGTCGGTGCGTCGAACCTCCATGTACATTAGACTTGAGATACGCCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACACTTGAGC--A
AAATTAAGTTCCGCATTACTCTACTTTGTGCTCCCAACTTCTGGGGCATCCGTTCAACGCCATCGCACACCGACCACTG-
GCTGCGTG-AAAATGAACAACCCACATATTGAACGCCACATATAAGAGTTGCCTGAACTCAACGTCACCGCTCTTTCTTG
ACTGCTTGTCTGAAACTTGGAAGGAATTTCACCGTCGCCATGTGTCACCCTGAGTCAAATTCACAGTTGTCTCA--CCCT
TCTTCCCGGATAGTCTCTGACATGTCCCATAGCTATAGCACTCTGCCTCCTTCTGTACTTGTCATCCGCACTTTGCCATG
TGCACTGAACACCACAGAATATACGACCATGTACTCTCTCAGCTTTTGACAATTTCAGACTTTCCGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCAACCGGCACCGATAGACCCAGTCACCAACTTGAATCCGGTACTCGTCAACACTTC
AGCAC--CCCCTGCACAA--TTTGTCTGATCACATGTCTGACCACCAGTGCCTTGGCCTGTTGCTGTGTCCCATGCTTAC
CGCACGCCTCGCCGCTATCACCGCGTCGAGCCTCTGTTGTCCTGGTCGAGTCTCCCGGGTAGCTAGCCCCCACTGCCTCA
A-CCCCCACTGCAGAGAACCACCGATCATCACCGACCGATGCCGAGTATCACGTCTCCTTCAGACCACTGGTACCCAGTC
TGAACCACGTGTCTCTCACCTTCCC--
>chrUn_1860
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-------------------------------------------------CCAAGCAATCACACAA-GCATGACACCGAGA
TTTGTTAACGAGGTTCACCATCATGGTTACATCCCCGGGGCCTGACTATGGGCGCTCCTCCCCGTGACACCGTCACAATA
CCGCACCCCGGCCGCTCGGGCGCCGGCACACGTCGCCGGCTCCCCCGCGTGCCT-GTGCTATTATGTTGGCATAGGTTAC
AGCGTGTGTCTA-CCCCCGATATATATGAAAGGCCTAGGATACAGGTGTCCTATTAGGACACAACTCC-TACTCTGTCTA
CACACAGTCCAAAACCAAGTCCAACTGTAACCTACCTTGTACAATAATATTCGACACAATTCTAACAAACTCCACCTTGG
CGAATATTCTCCACCACCTTGGATTCATCCATGCGTCAAACCTCCATGTACATTGGACTTGAGATACGCCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCATCACAGTCAACACTCGAGCA-A
AAATTAAGTTCCTCGTTACTCTACTTTGTGCTCCCAATTTCCGGAGAATCCGTTCAACACGATCACACACCGACCACTG-
TCTGCATG-AAAATGAACAACTCACATATTGGACGTCAAATATAAGAGTTACCTGAACTCAACATCACCGCTCTTTCTTG
ACTGCTTGTCTGAAACTT-AAAGGAATTTCACCGTCACCTTGTGTCACCCTGAGTCAAATTCGCAGTTGTCTCA--CCCT
TCTT-CCGGATAGTCTCTGACATGTCCCACCGCTATAGCACTCCGCCTCCTTCTGTATTTGTCATCCGCACTTTGCCATG
TGCACTGAACACCACAGAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTCGAGTCTCTCTATCACTTTCTCAAAT
TCTCCATGGTCAACTCCTGTCCATCAACTAGCACCGATAGACCCAGTCACCAACTTGAATCTGGTACTCGTCAACACTGC
TTCAGCACCCCTGCACAC--TTTGTCCGACCACATGTCTCACCATTAGTGCCTTGGTCTGTCGCTGTGTCCCGTGCTTAC
CGCACACCTCGCCGCTATTACCGCGTCGAGCCTCTGCTATCCTGGTCGAGTCTCCCGGGTAGCTAGCCCCCACTGCCTCA
A-CCCCCACTGCAGAGAACCACCGATCATCATCGACCGATGTCGAGTATCATGTCTCCATCAGACCACTGGTACCCAGTC
CAATCCACGTGTCTCTC----------
>chr4A_1860
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-------------------------------------------------CCAAGCAATCACACAA-GCATGACACCGAGA
TTTGTTAACGAGGTTCACCATCATGGTTACATCCCCGGGGCCTGACTATGGGCGCTCCTCCCCGTGACACCGTCACAATA
CCGCACCCCGGCCGCTCGGGCGCCGGCACACGTCGCCGGCTCCCCCGCGTGCCT-GTGCTATTATGTTGGCATAGGTTAC
AGCGTGTGTCTA-CCCCCGATATATATGAAAGGCCTAGGATACAGGTGTCCTATTAGGACACAACTCC-TACTCTGTCTA
CACACAGTCCAAAACCAAGTCCAACTGTAACCTACCTTGTACAATAATATTCGACACAATTCTAACAAACTCCACCTTGG
CGAATATTCTCCACCACCTTGGATTCATCCATGCGTCAAACCTCCATGTACATTGGACTTGAGATACGCCATGAGCACCG
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCATCACAGTCAACACTCGAGCA-A
AAATTAAGTTCCTCGTTACTCTACTTTGTGCTCCCAATTTTCGGAGAATCCGTTCAACACGATCACACACCGACCACTG-
TCTGCATG-AAAATGAACAACTCACATATTGGACGTCAAATATAAGAGTTACCTGAACTCAACATCACCGCTCTTTCTTG
ACTGCTTGTCTGAAACTT-AAAGGAATTTCACCGTCACCTTGTGTCACCCTGAGTCAAATTCGCAGTTGTCTCA--CCCT
TCTT-CCGGATAGTCTCTGACATGTCCCACCGCTATAGCACTCCGCCTCCTTCTGTATTTGTCATCCGCACTTTGCCATG
TGCACTGAACACCACAGAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTCGAGTCTCTCTATCACTTTCTCAAAT
TCTCCATGGTCAACTCCTGTCCATCAACTAGCACCGATAGACCCAGTCACCAACTTGAATCTGGTACTCGTCAACACTGC
TTCAGCACCCCTGCACAC--TTTGTCCGACCACATGTCTCACCATTAGTGCCTTGGTCTGTCGCTGTGTCCCGTGCTTAC
CGCACACCTCGCCGCTATTACCGCGTCGAGCCTCTGCTATCCTGGTCGAGTCTCCCGGGTAGCTAGCCCCCACTGCCTCA
A-CCCCCACTGCAGAGAACCACCGATCATCATCGACCGATGTCGAGTATCATGTCTCCATCAGACCACTGGTACCCAGTC
CAATCCACGTGTCTCTC----------
>chr4A_1861
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--------------------------------------------------CAAGCAATCACACAA-GCATGACACCGAGA
TTTGTTAACGAGGTTCACCAATATGGCTACATCCCCGGGGCCTGACTATGGGCGCTCCTCCCCATGACACCGCTACAATA
CCGCACCCGGTCGCCCTGGACACCGGCACATGCCGCCGGCTTCCCCTGCGTTTCGGTGCTATTATGTTGGCATAGGTTAC
ATCGTGTGTCTA-CCCCCGCTATATATGAGAGGCCTAGGATACAAGTGTCCTACTTGGACACGACTCCGTATCCTGTCTA
CACACTGTACGACTCCAAGTCCAACTGTAACCTAACTTGTACAATAATATTCGACACAATTCTAACAAACTCCACCTTGG
CGAATATTCTCCACCACCTTGAATTCGTCCGTGCGTCGAACCTCCATGTACATTGGACTGGAGATACGCCATGAGCCCCA
CTGCTACTCCCAGACTCCATGTGACTCCACCTGCAACTGTAGTCCCTTCTCGTCTTCTTCACAGTCAACACTCGAGCA-A
A-ATTAAGTTCCTCATTACTCTACCTTGTGCTTCCAACTTCCAGAGTATCCGTTCAACGACATCACACACCGATCACTG-
TCTGCGTGAAAAATGAACCACTCACATATTGGACGCCACATATAAGAGTTACGTGAACTCAACCTCACTGCTCTTTCTGT
ACTGCTTGTCTGAAACTT-GAAGGAATTTCACCGTCGCCCTGTGTCACCCTGAGTCAAATTCGCAGTTGTCTCA--TCCT
TTTTTTCGGATAGTCTCTGACATGTCCCACCGCTATAGCACTCCGCCTCCTTCTGT-CTTGTCATCCGCACTTTGCCCTG
TGCACTGAACACCACAGAATATACGGCCATGTACTCTCTCAGCTTTTGACAATTCCAGACTCTCCGTCACTTTCTCAGAT
TCTCCATGGTCAACTCCTGTCCATCTTCCGGTACCGATAGACCCAGTCACCAACTTGAACCTGGTACTCGTCAACACTGC
TTCAGCACCCTTTGCACAATTTTGTCTGACCACATGTCT-ACCACTAGTGCCTTGGTCTATCGCTGTGTCCCGTGCTTAC
CGCACGCCTCGCCGCTATCACCGCGTTGAGCCTCTGCTGTCCTGGTCGAGTCTCCCGGGTAGCTTGCCCACACTGCCTCA
A-CCCCCACTGCAGAGAACCATCGATCATCACCGACCGATGCCGAGTATCACGTCTCCATCAGACCATTGGGCCCCAGTC
CGATCCATGTGTCTCTCGCTATCCCGC
>SNPs
S--SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S---------------------S-
----------------------S-S------------------------S----------------------S-------
---------------S---------------S------------SS--------------------------------S-
-SSSSSSSSSSSSSSSSSS------------------S-----SSS----S-----------------------------
-----S---S-----------S--S---S----------------SS--S---S-SSS-SSSSSSSSSSSSSSSSSSS--
S------------------S------S-----S-----------S----SS-------------S-------------S-
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---SS---------------------------------------------------------------S-----------
-------------------------S------------------------------------------------------
-----------S------------------S-----------SSSS--S---------------S-S-----------S-
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--S------S------------------------------S--------S----------
--------S----S--S-S-----------------------S------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------S-------------------
---S---S-S-----------------------------------S----------------S-----------------
--------------------------------------------S-----------------------------------
---S--------------------------S------S-------------------S---------------------S
---------S------------------------S----------------------------------------S----
-------------------------------------------------------------------------SS----S
--------S------------------------------------------------------------S----------
---------------------------------------------------------------S----------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
---------------------------------------------------------S----------------------
------------------------------------------S-------------------------------------
------------------------------------------S-------------------S-----------------
----------------------------------------------------------S-------------------S-
-S------------------------S-------------------------------------S---------------
---------------------------
>forward_427
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-------TGTTCACCCGAGGTCACATG-----------------------------------------------------
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>reverse_1389
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----------------------------GTTACATGCGGCGCTACTTG--------------------------------
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>forward_1346
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----------------------------------------------CGACGCCATCTACTTCCTCC--------------
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>reverse_3039
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------------------------------------------------------------------------------TA
AACCCCACTGCAGAGAACC-------------------------------------------------------------
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