>input_sequence_60541
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----------------------ATGGCTTCGCCATTGCATTGTAGGCCAAAGCTGCGGCTCCTGTGCGTGG------CCC
TGGCCTTCGTCCTGGCCGTGGACGTGGGCAGGGCGGACATCTACAAGGACATCCAGATCATATGGAGCGCGGACCACACC
TACTACTTCATGGACGGTGACAGCGAGGCGCTGGCGCTCTCGCTGGACTTCAACCGGGGCTCCGCCTTCAAGTCCAACGA
CATGTACCTCTTCGCCCGCATCGACATCGACATCAAGCTCGTCGAGGGCAACTCCGCCGGCACCGTCTGCACCGTCTACG
TAAGATCTCGATTC---GTAATTA-------------GT----TTGCATTAGTGCACCGTACCAGTGGC---TGTGTGTG
CGTCGGTCGAGTTGACTTTTGACATGGGTGAATATCTCGGTGC----------ACGT-----------GCATACAGACCA
TCTCGGAGGGGCCGTGGGACATCCACGACGAGATCGACCTGGAGTTCCTGGGCAACTCCACCGGCGAGCCCTACACCCTC
CACACCAACGTATTCGCCTACGGCGTCGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCGCCGACTACCA
CACCTACTCCATCGTCTGGAACCCCAAGCGCATCACGTAAATA-------------------------ATCTCTTTTCTT
GCGTGA---------TATGTACGTATAGC------ATGTGGGTCGACCGTACCGATCTTTCTGAACATACAGAGCGACGT
GAACTGAAT------TTGTGCAGGATCGAGGTGGACGGCGTGACGATCCGGACGTTCGACAACAACGAGGACCAGGGCGT
GCCGTTCCCGTCGTGGCAGCAGCAGCGGGTGTACGGGAGCCTGTGGAACGCCGACGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCTGGCGCCCTTCGTCTCCTACTACCGCAACTACAACATCACCTACTGCCGGCCGTCGCCCGGC
GTGTCGTGGTGCGGCGCCGAGCCCGCCGGGTCCCCGCTCTTCAACCTCTCCCCCAAGGCGCGCGCCGACCTGCAGTGGGT
GCGCTACATGGGCTACGTCCTCTACGACTACTGCACCGACAGGAGCAACCGGTACACCGACGCCACCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGTGA---------------------------------------------------------
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>chr2A_1_TraesCS2A01G433600
CTAAAGTTGTGCATAGCATCTTTGCTGTCCCCG-----ACACTAACTTCACCAGTACACTAGTGCTTCTCACTAAGCCTA
GTGTCCTTAC--TAAACTCCGGTCTGATCTCCGTTCATTTAGA-AGCAAGTTTCTACCGCCTCAAAGCGCGTTTCTGCAA
GTCGTAA-TGCGTGTTCCCCGATGCGAGTAACGC-----CCAATT-GAAACTAACCTGGCGTCGGTCGCGTGCGGTGGGC
ATTGCTTGAACATCTTGGCAAGCCAGCCGTCCAAATCTGTCTCTCGCCGCGAGCTCTCCATACACCAGTA----AAAGTC
AAAACAGTTCCAGATCGACCGTATCCCGCTCACGGCTTAGCATGTACTCCCTCTATTCTAAAATAGATGAATCGACTTTA
TACTAACTTTAGTATAAAAATAGTATAAAGTTGGGTCATCTATTTTAAAACCGAGGGAGTAGAGTTATGCCAACAC----
CAAACTATGAGCACTCCACTTAATTCGTTTGACAAATAGCGAATCTGAGTCGACGTGTGGTG------------------
-----TGAGGATAGGTCAGCGTGCCTCTGATAAGATAGCAGTTTACTGAGATCTAGCCAGCCCAGCAAACCTACGGCTCC
CATGCGTTGA-----------------------TGCTCAGCTCTCCGTGTAGCAAAGAGACCTCTCGTCTCGTGCATTGC
ATGTGCACGGCGTCT-----------GCCGGAAGGGACGGCCAGTGCTCCCAAAACGCTTATATACGAGCACCTAGTCGC
TTAGCAACCTAGCAAGCTTGTCGTCCCAAACCAGCAGCAGGTTCTCCCTCCCTTCGGCCTTGGGCAAGGTTGGCATTCGA
TTCCACACTTGCCTTGGCGCCCCCTCCAGCAAATTCGTTCCTCCATCTCTCGCCCATTTCCTCACCAGCTTCGTCTCCAC
T-----CTCCAATATATATACAGGAACCGCTGAC----------------------------------------------
---CTCTCTCTCGGCGTTGGAAGCAGCAAGACAGAGGCTGGCTAGCTAGTGTCCCGGCACTGCACACAGCAGCAGCAGGG
C--------TAGCTAGTTAGCCATGGCTTCGCCATTGCATTGTAGGCCAAAGCTGCGGCTCCTGTGCGTGG------CCC
TGGCCTTCGTCCTGGCCGTGGACGTGGGCAGGGCGGACATCTACAAGGACATCCAGATCATATGGAGCGCGGACCACACC
TACTACTTCATGGACGGTGACAGCGAGGCGCTGGCGCTCTCGCTGGACTTCAACCGGGGCTCCGCCTTCAAGTCCAACGA
CATGTACCTCTTCGCCCGCATCGACATCGACATCAAGCTCGTCGAGGGCAACTCCGCCGGCACCGTCTGCACCGTCTACG
TAAGATCTCGATTC---GTAATTA-------------GT----TTGCATTAGTGCACCGTACCAGTGGC---TGTGTGTG
CGTCGGTCGAGTTGACTTTTGACATGGGTGAATATCTCGGTGC----------ACGT-----------GCATACAGACCA
TCTCGGAGGGGCCGTGGGACATCCACGACGAGATCGACCTGGAGTTCCTGGGCAACTCCACCGGCGAGCCCTACACCCTC
CACACCAACGTATTCGCCTACGGCGTCGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCGCCGACTACCA
CACCTACTCCATCGTCTGGAACCCCAAGCGCATCACGTAAATA-------------------------ATCTCTTTTCTT
GCGTGA---------TATGTACGTATAGC------ATGTGGGTCGACCGTACCGATCTTTCTGAACATACAGAGCGACGT
GAACTGAAT------TTGTGCAGGATCGAGGTGGACGGCGTGACGATCCGGACGTTCGACAACAACGAGGACCAGGGCGT
GCCGTTCCCGTCGTGGCAGCAGCAGCGGGTGTACGGGAGCCTGTGGAACGCCGACGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCTGGCGCCCTTCGTCTCCTACTACCGCAACTACAACATCACCTACTGCCGGCCGTCGCCCGGC
GTGTCGTGGTGCGGCGCCGAGCCCGCCGGGTCCCCGCTCTTCAACCTCTCCCCCAAGGCGCGCGCCGACCTGCAGTGGGT
GCGCTACATGGGCTACGTCCTCTACGACTACTGCACCGACAGGAGCAACCGGTACACCGACGCCACCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGTGAGCAGTTTTCGTCGTCGTCGTCGTCGTCGTCGGGTTTGGCTGAGCGAGCGAGGGGGTT
GAGCGACAATTCATATTGTTTGGGTTCGATAT--A--GTATCGTACCCTGATTATTTCTGTACATCTGAAGAAACAGGTA
CGTGCGGCGCAGCGGGCTTGATTCTTTCATTGGGTTTCTGAACGT--CCTCCCCTTTCCTCCACTTGTATCAACATTTAT
ATGACACAC--AGAGCAA--TTTTTTTGGCCAGTTTGCTCTTCTTCCAGGCTCAAGATGTCGAGAAATGAGTTAATCTTA
----TCTCAGCGTCTGTATATGCATGAATTACTCGGCTACAGGTTACAGCAGGGGCAGGTTTCTGCAGGAATCATCCTTA
CTACGATCCGCTAGAGAAACTCCTG--GTTAGA---TCCTGTATTATATACGCTACGCCTA-------------------
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--------------CACGTCACATCTTGAGTGAGACGACCTAGCAGGCTA-------CGCTAGAAGCACCAACACAAA-C
ACCGTACGTCTGTCTCGTCTAATAACACGACGACACGTGTGCGGT---AGTATGGCCGACGGAACCGAACAATCAGACGG
CAGAGGCG------AGCTGGTCCATGTCGCACTCGGCGGGGCGGCCCAGGTTCCAGGGGTCGTCGCAGTAGTCCATCACC
ATGTACGTGTCGCGCGCCCACGCCACCGCGCGCTCGCCGTCGGGCCCCAGCCGCCGGGCCATCCACGACGAGGCGTCGCC
CGGGCAGCAGAAGGCCGACGGCGCTCCGTCCTGATCGCCGTTGCCGGCCGCGGAGACGCAGGCGCTGGAGGCGTAGGTCC
CGTAGGAGGCGACGAAGGGCGCGTGCGCCCAGTCGATCTTGACCCGGCCGCCGCGGGTGGCCCAGGTGTCGCCGTCCCAG
ATGGTGGCGTGCACCTTCATCGCCTGCCTGCTCAGGTACGGCACGCCGTTCGCGTCGTGGTTCCGGAACACGCGCACCGG
CACGCCGTCCACAGAGAAGCTGGAAAACAGAGCATCGACGGAAACAAATTGT
>chr2B_8
-------TGTGCATAGCATCTTTGCTGTCGTAGCCCCAACACTAACTTCACCAGGACACTAGTGCTTCTCACTAAGCGAA
GTGTCCTTAC--TAAACTCTGGTGCGATCTCCGTTCATTTAGG-AGCAAGTTTATACCGCCTCAAAGCGCGCT----GAA
GTCGCAA-TGCGCGTTCCCCGATGCAGGTAACGC-----CCAATTGGAAATTAACCTGGCGTCGGTCGCGTGCGGTGGGC
AATGCTTGAACATCTTGGCAAGCCAGCCGTCCAAATCTGTCTCCCGCCGAGAGCGCTCACCACACCAGTA----AAAGTC
AAAGCAGTTCCAGATCGACCGTATCCCGCTCACGGCTTAGCATGTA----------------------------------
-------------------------------------------------------------GAGTAGTGCCAACAC----
TAAACTATGAGCCCTCCACTTAATTCATTTGACAACTAGCGAATCTGAGTCGAGGTGCGGTG------------------
-----TGAGGATAGGTCAGCGTGCCACTGATAAGATAACAGTTTACTGAGATCTAGCCAGCCCAGCAAACCTACGGCTCC
CATGCGTTGA-----------------------TGCTCAGCTCTCCATCGAGCAAAGAGACCTCTCGT------------
----GCATTGCATGTGCACGGCGTTCGCCGCGACGGCCGGCCAGTGCTCCCGAGACGCTTATATACGAGCA---------
------ACCCAGCAAGCCTGTCTTCCCAAATCAGCAGCAGGTTCGCCCTCGCTTCCGCCTTCAGCAAGGCTGGCATTCGA
CTCCGCTCTTGCCTTGCCGCCCTCCTCAGCAAATCC----CTCCACC--------ATTTCGTTGCCACCTTCGTCTCCAA
T-----A---TATATACAGGCCGGAGCCGCTGAC----------------------------------------------
---CTCTCTCTCCGCGTTGGAAGCAGCAAGACAGAGGCTAGCTAGCTTGTGTCCCGGCACTGCACATAGCAGCAGCAGGG
ACAGG-GGATAGCTAGCCAGCCATGGCGCCAGCATTGCCTTGTAGGCCAAAGCTGCGGCTCCTGTGCGTAGGCGTAGCCC
TGGCCTTCCTCCTGGGCGTCGATGTGGGCAGGGCGGACATCTACAAGGACATCCAGATCATATGGAGCGCGGACCACACC
TACTACTTCATGGACGGCGACAGCGAGGCGCTGGCGCTCTCGCTGGACTTCAACCGGGGCTCCGCCTTCAAGTCCAACGA
CATGTACCTCTTCGCCCGCATCGACCTCGACATCAAGCTCGTCGAAGGCAACTCCGCCGGCACCGTCTGCACCGTCTACG
TAAGATCTCGATCTAGTCAGTCTGTCGTTTTCAGTAGGA----TTGTATTTGGTGCAGCTAGCGCGCCAGTGCGCGTATG
C----GTCGAGTTGACTTTTGA-----GTGAATATCTGGGTGC----------ACGTGTACGTGGTACGCATACAGACCA
TCTCGGAGGGGCCGTGGGACATCCACGACGAGATCGACCTGGAGTTCCTGGGCAACTCCACCGGAGAGCCCTACACCCTC
CACACCAACGTATTCGCCTACGGCGTGGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCGCCGAGTACCA
CACCTACTCCATCGTCTGGAACCCCAGGCGCATCACGTAAATAAC--------CTAGCACATTTCCCGATCTCTTTTCTT
GCGTGA---------TAAGTATGTACGTTGAGTATGTGGTGGTCGATCGTACCGATCTT-CTGAACATATATACGGATGT
GAACTGAAC------TTTTGCAGGATCGAGGTGGACGGCGTGACGATCCGGTCGTTCGACAACAACGAGGAGCAGGGCGT
GCCGTTCCCGTCGTGGCAGCAGCAGCGGGTGTACGGGAGCCTGTGGAACGCCGACGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCTGGCGCCCTTCGTCTCCTACTACCGCAACTACAACATCACCTACTGCCGGCCGTCGCCGGGG
GTGTCGTGGTGCGGCGCCGAGCCCGCCGGGTCCCCGCACTTCAACCTCTCCCCCAAGGCGCGCGCCGACCTGCAGTGGGT
GCGCAACATGGGCTACGTCATCTACGACTACTGCACCGACATGAGCAACCGGTACACCGCCACCAGCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGTGAGGAATTTGA-------------TCTCATTGGGCTTGGTT-----GAGTGAGAGGGTT
GAGCGATCGATTC-ATTGTTTGGGTTCGATAT--ACAGTATCGTACCCTGATTATTTTTGTACATCTGAAGAAACAGGTA
CGTGCGGCGCAGCGGGCTTGATTCTTTCATTGGATTTCTGATTCCGGCCTCCCCTTTCCTCCACTTGTATCAACATTTAT
ATGACACACACAGAGCGATTTTTTTTTGGCCAGTTTGCTCTTCGTCCAGGCTCAAGATGTCGAGAAATGAGTTAATCTTA
ATTATCTCAGCGTCTGTATATGCATGAATTACACGGCTACAGGTTA-AGCAGGGGCAGGTTTCTGCAGGAATCATCCTTG
CTATGATCCGCTAGAGAAACTCCTA--GTAGTTATCTCCTGTATTATATACGCTACGCCTATTTGCGATTTTTTGTTCAA
AAGGACCACATACGCTATCATATTGGCAGAAAGGACCACTCGCAGACCATATTGACAAAAAAGACTACATACGCCATGGC
GGCAAGTCTGGCAGCCAACAAGTGGCACCTGCCGCCACATGTGGAGGCGGCACGACCTGCCGCCACAGCCTCAGGCGGCA
GCTCGGCTCCAACAGATTTCCATCGGACGCATCGACTCGCAACGGGATAGGAAGAGGTGGCGGGCAGCTCCTACAGCGCG
ACAGCCCGTGCAGCAGCACGATGCGACGGCCCCACGCGAAGCAGTCAAAAGCAACTCGGCCGCTTCCAAGTTTGTGCGCC
GCTGCTTGCACCCGATCCAGTACTGCCTTGCTCTTTCATTCTCGCTCCCCAAGTCTGAGGCAAATTCGAAGCATGTTGGT
TCCTTCGTTGCAAAGTTTCTCCACACACATACTAGTATTTACTGTATTTGTTTCTGCTGTAGCATATGGCTTGATAAATA
ATAAAACATGTCAAAACTTGAATAGGAAAGTAGGAATTAGCGCCACTGTACTACAGCAGAAAAAGGAGCTACCGCCATAG
GGATAGGCGGCGGGACCCGCCACCTCTTCCCGTTCCGTCGCCAGTAGCTGCATGGGCCGAAAACCTGTTGCAGCTGAGCT
GCCGCCTGAGGTTGTGGCGGCAGGTCTGGCCGCCGCTGGCCGTGGCGGCAGGTGCCACGTGTCGGCTGCCGGACCTGCCG
CCACGGTGTACATGGTCTTTTTTGTTAATACAGTTTGAAGGTGATTTTTTCTGTCAATACAAAAGCATGTATGGTCCTTT
GTGACAAAAAATCACACGTCACATC-TGAGTGAGACGACCTAGCAGGCTAGGCTAGACGCTAGAAGCACCAACACAAA-C
ACCGTACGCCTGTCT-GTCTGGC-ACACGACGACACGTATGTGGTG--AGTATGGCCGACGGAACCAAACTATCACACGG
CTGAGGCGAGGCT------GTCCATGTCGCACTCGGCGGGGCGGCCGAGGTTCCAGGGGTCGTCGCAGTAGTCCATCACC
ATGTACTTGTCGCGCGCCCACGCCACCGCGCGCTCGCCGTCCGGCCCCAGCCGCCGGGCCATCCACGACGGGGCGTCGCC
CGGGCAGCAGAAGGCCGACGGCGCTCCGTCCTGATCGCCGTTGCCGGCCGCGGAGACGCAGGCGCTGGCGGCGTAGGTCC
CGTAGGAGGCGACGAAGGGCGCGTGCGCCCAGTCGATCTTGACCCGGCCGCCGCGCGTGGCCCAGGTATCGCCGTCCCAG
ATGGTCGCGTGCACCTTCATCGCCTGCCTGGTCAGGTACGGCACGCCATTCGCGTCGTGGTTCCGGAACACGCGCACTGG
CACACCGTCCACAGAGAAGCTGGAAAACAGAGCATCAAAGAAACAAA-----
>chr2D_36
----------------------------------------ACTAGCTTCAC-----CAGTACGGCTTCTTGCTAAACGTA
GTGTCCTTACACTAAACTCCGGCCCG------GTTCATTTAGAAAGCAAGTTTCTACCGCCTCTAAGCGTGTTTCCGGAA
GTCGTAGTTGTGCGTTCCCCGATGC-GGCAATGC-----CCAATTGGAAATTAACTTGGC----GTCGCGTGCGGTGGGC
ATTGCTTGAACATCTTCGCAAGCCAGCCGTCTAAATCTGTCTCTGGAGCTCCATATACT----ACCAGTG----AAAGTC
-AAACAGTCCCAGATCGACTATCCCGCGCTCACGGCTCAGTCCCAGATCGGC----------------------------
---------------------------------------------------------------AGTGCCAGAG-ACTAAT
TAAACTATGAGCACTCCACTTAATTCGATTGACAAGTTGCGGATCTGAGTCGAGCTGCATGTGTAG-------TGTATGC
ATGATTGAGGTCAGGTCAGCGTGCGTCTGATAAGATATCAGTTTACTGAGATGTAACCAGCCTAGCTAACCTACGGCTTC
CATTGCAAGTGCGTCCCACTAGGCAAAGTACATTGTTCAGCTCTCCTTCTAGCAAAGGGACCTCTCGT------------
----GCATTGCATGT-----------GACGGGACGGCCGGCCAGCGCTTCCAAACCTAGCAAG-----------------
---------------------CTTCCCAAACCAGCAGCAGGTTCGCCCTCCCTTCGGCCGTGGGCAAGGCTGGCATTCA-
--------------------------------------------ATCTCTCACGCATTTCCTCATCACTTTCGTCTCCAA
T-----T---AATATATATACAGAAGCCCCTCTCTCTCT-----------------------------------------
-------------------------CAAGAGAAA-----GGCTGGCTAGTTCCTCGGCACTACACAAAGCGGCCGGCA--
----G-GGATAGCTAGCTAGCCATGGCGCCAGCATTGCCTTGTAGGCCAAAGCTTCGGCTCCTGTGCGTAG------CCT
TGGCCTTCCTCCTGGCCGTCGATATAGGCAGGGCGGACATCTACGAGGACATCGAGATCATATGGAGCGCCGACCATACC
TACTACTTCATGGACGGCGAGAGCGAGGCGCTGGCGCTCTCGCTGGACTATAACCGGGGCTCCGCCTTCAAGTCCAAGGA
AATGTACCATTTCGTCCGCATCGACATCGACATCAAGCTCATCGAAGGCAACTCCGCCGGCACCGTCTGCACTGTCTACG
TAAGTACCTCTACAGTTCGTTTTCTTCTGTGAGAAACTGAGAATTGCGTCAGTGCAAA------------------TGTG
CATGTCTGAAGTTGACCTCTGACGCGGGTGAATATAATTCTGGATGCACGCGTACGT-----------ACGTACAGACCA
TCTCGGAAGGGCCGTGGGAGGTTCACGACGAGATCGACCTGGAATTCCTGGGCAACTCCACCGGCGAGCCTTACACGCTC
CACACCAACATCTTCGCCAACGGCGTGGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCTCCGAGTACCA
CACCTACTCCATCGTCTGGAACCCCAAGCGCATCACGTAAGCAAGCTAGTAGACTAGCACATTTCTCGATCTCTCTTCTT
ACGTACGTACTGTACTACGTACCTAGATGA--TATATGCATGTCGA------------T-CTGAACGTATAGACCTGACC
TGATAACCTAATTTGTTTTGTAGGATCGAGGTGGACGGCGTGACGGTCCGGACGTTCGACAACAACGAGGACCAGGGCGT
GCCGTTCCCGTCGTACCAGCGGCAGCGCGTGTACGGGAGCCTGTGGAGCGCGGAGGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCTGGCGCCCTTCGTCTCCTACTACCGCAACTACAACGTCACCTGGTGCCAGCCGTCGCCCGGC
GTGCTGTGGTGCGGCACCGAGCCCGCCGAGTCCACGCACTTCAACCTCTCCCCCAAGGCGCTGGCCGACCTGCAGTGGGT
GCGCGACAACCACTACGTCATCTACGACTACTGCCTCGACAGGAGCAACCGGTACAACGACGCAACCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGTGAG--------------------------------------------------------
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>chr2D_49
-----------------------------------------------------GTACACTAGTGCTTCTCACTAAGCGAA
GTGTCCTTAT--TAAACTGCGGTGTGATCTCCGTTCATTTAGG-AGCAAGTTTCTACCGCCTCAAAACGCGTTTATGGAA
GTCGCAA-TGCGCGTTCCCCGATGCGGGTAACGCGCCCACCAATTGGAAATTAACCTGGCGTCGGTCGCGTGCGGCGGGC
ATTGCTTGAACATCTTGGCAAGCCAGCCGTCCAAATCTGTCTCCCGCCGATCGCTCTCCACACACCAGTA----AAAGTC
AAAACAGTTCCAGATCGACCGTATCCCGCTCACGGCTTAGCATGTA----------------------------------
-------------------------------------------------------------GAGTACTGCCAACAC----
TAAACTATGAGCACTCCACTTAATTCGTTTGACAACTAGCGAATCTGAGCCGAGGCGCGGGG------------------
-----TGAGGATAGGTCAGCGCGCCTCTGATAAGATAGCAGTTTACTGAGATCTAGCCAGCCCAGCAAACCTACGGCTCC
CATGCGTTGA-----------------------TGCCCAGCTCTCCATCTAGCAAAGAGACCTCTCGT------------
----GCATTGCATGTGCACGGCGTCCGCCGGGACGGCCGGCCAGTGCTCCCAAAACGCTTATATACGAGCACCTAGTCGC
TTAGCAACCTAGCAAGCTTGTCTTCCCAGACCAGCAGCAGGTTCTCCCTCCCTAC-------GGCAAGGCTGGCATTCGA
TTCCTCACTTGCCTTGCCGCCCTCCCCAGCAAATTC----CTCCACCCCTCGCCCATTTCCTCACCACCTTCGTCTCCAC
TCCAGCA---TACATATATACAGGGGCCGCTGAC----------------------------------------------
---CTCTCTCGCCGCGTTGGAAGCAGCACGACAGAGGCTAGCTCGCCAGTGTCCCGGCACTGCACATAGCAGCAGCAGGG
ACAGGCGGATAGCTAGCTAGTCATGGCTTCGCCATTGCCTTGTAGGCCAAAGCTGCGGCTCCTGTGCGTAGGCGTAGCCC
TGGCCTTCCTCCTGGCCGTGGGCGTGGGCAGGGCGGACATCTACAAGGACATCCAGATCATATGGAGCGCGGACCACACC
TACTACTTCATGGACGGCGACAGCGAGGCGCTCGCGCTCTCGCTGGACTTCAACCGGGGCTCCGCCTTCAAGTCCAACGA
CATGTACCTCTTCGCCCGCATCGACCTCGACATCAAGCTCGTCGAAGGCAACTCCGCCGGCACCGTCTGCACCGTCTACG
TAAGATCTCGATCTCTAGTTATTA-------------GC----TTGCATTAGTGCAGCTTAGCTTGCCAGTGTGTGTGCG
CGTCGGTCGAGTTGACTTTTGACATGGGTGAATATGTCGGTGC----------ACGTGTACGTGGTACGCATACAGACCA
TCTCGGAGGGGCCGTGGGACATTCACGACGAGATCGACCTGGAGTTCCTGGGCAACTCCACCGGCGAGCCCTACACCCTC
CACACCAACGTGTTCGCCTACGGCGTGGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCGCCGAGTACCA
CACCTACTCCATCGTCTGGAACCCCAGGCGCATCACGTAAGCAAC--------CTAGCACATTTCTCGATCTCTTTTCTT
GCGTGA---------TATGTACGTAGAGTA--TATATGTAGGTCGACCGTGCCGATCTT-CTAAACACATCGGCCGACGT
GAACTGAAC------CTGTGCAGGATCGAGGTGGACGGCGTGACGATCCGGTCGTTCGACAACAACGAGGACCAGGGCGT
GCCGTTCCCGTCGTGGCAGCAGCAGCGGGTGTACGGGAGCCTGTGGAACGCCGACGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCTGGCGCCCTTCGTCTCCTACTACCGCAACTACAACATCACCTACTGCCGGCCGTCGCCCGGC
GTGTCGTGGTGCGGCGCCGAGCCCGCCGGGTCGCCGCTCTTCAACCTCTCCCCCAAGGCGCGCGCCGACCTGCAGTGGGT
GCGCAACATGGGCTACGTCATCTACGACTACTGCACCGACATGAGCAACCGGTACACCGCCACCAGCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGTGAGGAGTTTGA-------------TCGTCGTCGGGTTTGGCTGAGCGAGCGAGAGGGTT
GAGCGACCGATTC-ATTGTTTGGGTTCGATATATACAGTGTCGTACCCCGATTATTTTTGTACATCTGAAGAAGCAGGTA
CGTGCGGCGCAGCGGGCCTGATTCTTTCATTGGATTTCTGGTTCCGGCCTCCCCTTTCCTCCACTTGTATCAACATTTGT
ATGACACACAGAGAGCAA--TTTTTTTGGCCACTTTGCTCTTCGTCCAGGCTCAAGATGTCGACAAATGAGTTAATCTTA
ATTATCTCAGCGTCTGTATATGCATGAATTACTCGGCTACAGGTTACAGCAGGGGCAGGTTTCCGCAGGAATCATTCTTG
CTATGATCCGCTAGAGAAACTCCTACAGTAGTTATCTACTGTATTATATACGCTACGCCT--------------------
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-------------ACACGTCACATC-TGAGTGAGACGACCTAGCAGGCTA-------CGCTAGAAGCACGAACACAAAAC
ACCGCACGTCTGTCT-GTCTGATAACACGACGACACGTGTGCGGTAGTAGTATGGCCGACGGAACCAAACAATCAGACGA
CCGAGGCGAGCTGGAGCTGGTCCATGTCGCACTCGGCGGGGCGGCCCAGGTTCCAGGGGTCGTCGCAGTAGTCCATCACC
ATGTAATTGTCGCGCGCCCACGCCACCGCGCGCTCGCCGTCGGGCCCCAGCCGCCGGGCCATCCACGACGAGGCGTCGCC
CGGGCAGCAGAATGCCGACGGCGCTCCTTCCTGATCATCGTTGCCGGCCGCGGAGACGCAGGCGCTGGCGGCGTAGGTCC
CGTAGGAGGCGACGAAGGGCGCGTGCGCCCAGTCGATCTTGACCCGGCCGCCGCGCGTGGCCCAGGTGTCGCCGTCCCAG
ATGGTGGCATGCACCTTCATCGCCTGCCTGCTCAGGTACGGCACGCCGTTCGCGTCGTGGTTCCGGAACACGCGCACCGG
CACGCCGTCCACAGAGAAGCTGGAAAACAGAGCATCAAAGAAACAAA-----
>chr2A_106
--------------------------------------------------------------------------------
--------------------------------GTTCATTTAGAAAGCAAGTTTCTACCGGCTCGAAGCGTGTTTCTGGAA
GTCGTAATTG---------CGATGT-GACAATGC-----CTAATTGGAAATTAACTTGGCTT-----GCGTGCGGTGGGC
ATTGCTTGAACATATTCTCAAGCCAGCCGTCCAAATCTGTCCCTCGCTGAGA---CTCCATACACACAAGTAAAAAAGTC
-AAACAGTCCCAGATCGACCGTATCCCGCTCACGGCTTAGCATGTA----------------------------------
-------------------------------------------------------------GTAGTGTCAGAG-AC----
TAAACTATGAGCATTCCACTTAATTCGATTGACAAGTAGCTAATCTGAGTCGAGGCGCATGTAGTGTGTGTGCTGTGTGC
ATGATTGAGGTCAGGTCAGCGTGCCTCTGATAAGATATCAGTTCACTGAGATCTAGCCAGCC------------GGCTCC
CATTGCAACTTGCAAAG---------------------AGCTCTCCATCTAGCAAACAGACCCCTCGT------------
----GCATTGCATGT-----------GACGGGACGGCCGGCCAGCGCTTCCAAACCTAGCAAGCTTCATC----------
--------------AGCTTGCCTTCCCAAACCAGCAGCAGGTTCGCCCTCCCTTCGGCCTTGGGCAAGGCTGGCATTCG-
--------------------------------------------ATCTCTCACGCATTTCCTCATCACTCTCGTCTCCAA
T-----T---AATATATATACAGAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCCGCGTTGGAAGAGCAAGATAAA-----GGGTAGCTAGTTCCTCGGCACTGCACAAAGC-GCCGGCA--
----G-AGATAGCTAGCTAGCCATGGCGCCAGCATTGCCGTGTAGGCCAAAGCTGCGGCTCCTGTGCGTAG------CCT
TGGCCTTCCTCCTGGCCGTGGATGTGGGCAGGGCGGACATCTACGAGGACCTCGAGATCATATGGAGCGCCGACCATACC
TACTACTTCATGGACGGCGAGAGCGAGGCGCTGGCGCTCTCGCTGGACTATAACCGGGGCTCCGCCTTCAAGTCCAAGGA
AATGTACCATTTCGTCCGCGTCGACATCGACATCAAGCTCATCGAAGGCAACTCCGCGGGCACCGTCTGCACCGTCTACG
TAAGTACCTCTACAGTTCGTTTTCTTCCGTGAG--------AATTGCGTTAGTGCCAA------------------TGTG
TACGTCTGAAGTTCACTTCTGACGCGGGTGAATATAATTCTGGATGCACG----CGT-----------ACGTACAGACCA
TCTCGGAAGGGCCGTGGGAGGTTCACGACGAGATCGACCTGGAGTTCCTGGGCAACTCCACCGGCGAGCCTTACACCCTC
CACACCAACATCTTCGCCAACGGCGTCGGCGGCCGGGAGCAGCAGTTCAAGCTCTGGTTCGACCCCAGCTCCGACTACCA
CACCTACTCCATCGTCTGGAACCCCAAGCGCATCACGTAAGCAAGCTAGTAGACTAGCACATTTCTCGATCTCTTTTCTT
ACGTACATACTGTAGAT---------------------CATACCGA------------T-CTGAACGTATGGATGTGATC
ACCA------------TTTGTAGGATCGAGGTGGACGGCGTGACGGTCCGGACGTTCGACAACAACGAGGACCAGGGCGT
GCCGTTCCCGTCGTACCAGCGGCAGCGCGTGTATGGGAGCCTGTGGAGCGCGGAGGACTGGGCGACGCAGGGCGGGCGCG
TCAAGACGGACTGGTCGCAGGCGCCCTTCGTCTCCTACTACCGCAACTACAACGTCACCTGGTGCCAGCCGTCGCCTGGC
GTGCTGTGGTGCGGCACCGAGCCCGCCGAGTCCACGCACTTCAACCTCTCCCCCAAGGCGCTGGCCGACCTGCAGTGGGT
GCGCGACAACCACTACGTCATCTACGACTACTGCCTCGACAGGAGCGACCGGTACACCGACGCCACCAGGCCCAAGGAGT
GCTCGCTCCCGCCCCGCCCGT-----------------------------------------------------------
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>SNPs
SSSSSSS----------------------SSS---------------------------------------------S--
-----------------------------------------------------------------------------S--
------------S-------------S-----------------------S-----------------------------
-------------------------------------------------S------------------------------
----------------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------
S----------------------------------S-----------------S---S----------------------
--------------------------------------------------------------------------------
----------------------------------------------S-S-------------------SSSSSSSSSSSS
SSSS---SS--S-S-----------------S-S--S-------------------------------------------
----------------------S----------------------------------------------S----------
----S-----------S-----S-S-----------SSSS---------------------------S------------
------SSSS---------------S------------------------------------------------------
------------S-----------------------------------------------------S-------------
S---------------S---------------------S------------------------------S----------
--------S-----------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------------------------------S----------------------------------
------------SS-----S------------------S-----------------S-S--S-SSSSSS-----------
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-------------------------S--S----------S-------------------S---------S---S------
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----S--------------S------------------------------------------------------------
------------------------S-----SSSSSSSSSSSSSSS-----------------------------S-----
-------SSS-SSS-------------------------------------------S----------------------
---------------------------------S-------SSSS-----------------------------------
-------------------------------------------S------------------------------------
-------------------------------------------------------------------------------S
---S--------------------S----SSSS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------S----S---------------------------------------------S-------------
-S------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
------------------------------------S-S-S--SS--SSSSS
>forward_723
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTCGTCTCGTGCATTGC
ATG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>reverse_2525
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TCCTCCCCTTTCCTCCACTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
