>input_sequence_60530
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--------------------------------------------------------------------ATGGCGTCTGCT
GAAACAGGAGGCGACAAGTACCGGTCGTTCATGGACGGCGAGGGCGAGAAGAACACCGTGTGGAGGCATGGAGTCCCTCC
CAACTTCGACGTGGTGAACAAGCTCTTCGAGGAAGAGAGGACTAAGGTACC--------------CACAATATGTTGTTC
CACG--------------------------------AGTACACACGCCCCATGTGCTTCTTCTATGTGTGTTGGAACGAA
TTGTACTTATTTTCAAACATAATTTGTTGTTGATCACGTGT------------------------------------ACA
TGACTAACGCCGC-----ATGCATGCGCCACAGGAATGGGCGGAGGGGAGTGTGGAAGAG-AAGGTGCAGCGGTTGCTCA
AGACATGGGAGATGGAGATGTTCCACAAGTTGCGGCCCGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGC
AGCACCAACGGTGAGAC--CTCACTCCGTCAG--TCCG--------------------------------------TCCA
TCGATCT-TTCTGGCCACATAAGA------------------CACCAACGCTTTTCAC----CAGGGATGAAGCCTCTGA
CCCGAAAGGAGTGGACCGCCATCGGTGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTACGAC
CCGGACACAGAGACGTTCGACTCCGGCATGGAGACGTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTCGA
CGTCTACTGCACCGGCCCGCCCA------GGGTGGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGGCCGTTCAAGG
GCCACCCTCCTCACGGCCAGCGCGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTTTGGCATGCAGCTTGGTATAT
ACTCCATCCGTCTCAT----------------------------------------------------------------
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-------------------------------------------AATATAAGACGTTTTTGCAAATTATGTTAGGTTGCAA
AAATGTCATATATTGTGGGACAGAGGGAGTACCAAATT--------------------------TCGCGTTGC-------
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---------------------------ACAGTCAA-TTTTGTTCAGAGTT----------------------------GG
AACTTCACTTATATGATGCGCT----------------------------------------------------------
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-----------------------------GCTGCAACAATG--TAATGATAGGTTGATGAGGAGATGAAAGTGGAGAAGG
CAGAGTACTTCTACGAGCGCGGCAACTTCCTCGCGAGCTTCTTGAGCACGCCTGCTGCT------------GCTG-----
-CATCAGCTTCAGGTTGCCCTGTGATGAGAGGAAACTAA-----------------------------------------
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>chr6D_1_TraesCS6D01G007400
AACATCAAATGACTATTTGCTCCATGAAGCTAAAACTCCTGCTGGGCCTGAGAGTCTGGACTTGAAGCAAAGGAGGGCAT
GTCTATCATTTTCAGCTTCCTTGCAGATGGCTAGTGGCAGGCTGCAAAGGAAGCAAAAGAGGTAGAGAAACCAAACAAAG
CTTGGAAACAAGACAGCGGAAGATGCCATGGCTGCTGTAGTTTACAGCTATGGAGTGTAGAAATCAAAGTTCTCATGTGC
AGGAGGATGTCTAAGTACTCAGCTGTGGGGTGCGACGGCATGAATATATATTCACGGCTCAGCCATCAATATGGTGTGGT
GTGAACGGGGATGATGCAAGCAACACGACTTGCTTTTGAATCGATATTGGATTTGGCGTCCATCGGATCTACTGTTTGCC
GACTGAATTAGTTTTGACTTGGAGGTGGTTGTTCAAAGCCCAAACTTGCGAAATGAAATACTCCAACGCCAACTACTCCT
TCCGTTCTTTTTTATAAGACGTTTTGGACAGCTGACATTGAACTGTCTTGTGCTCTATCTAAATTGTCTAAACGTCTTAT
ATAAGATAACAGAGGGAGTAGTTGGTGTTGTGAGCATGCATTTGGACGCTAAGAGATTTGACCCTCTGCTTACACTGCAT
TGAACCAAACACCCTCCAACAGCACGAGGAATACATGTAGTTGCCTGAGGTGCAGTGTGAATGCACGCTTCATCTTGAAG
AATAATGAGCTAAAAGTGGAGAAAACTAAATATATTTACTAACATCTTGGACACATCTGGGTTGGTGGATAGCATA---T
ACTAGTCATGTTTTTCCAATGCAGTGACGTTGGCGATGAGGCAGGCCGCTCAGATTTTT----------CCTATATGTAG
GGGATCAATCCTTCACTTGACTCTCAACCCAC------CTTCCGAATA--------CTACTAACCTAGTACCAAGTTGTA
CCTTGAACTCCCCTGC-AAAAAAGAAAAAGTTGTACCTTGAACTGAGACCAAGGTAATTTAGCCAGCTATGGCGTCTGCT
GAAACAGGAGGCGACAAGTACCGGTCGTTCATGGACGGCGAGGGCGAGAAGAACACCGTGTGGAGGCATGGAGTCCCTCC
CAACTTCGACGTGGTGAACAAGCTCTTCGAGGAAGAGAGGACTAAGGTACC--------------CACAATATGTTGTTC
CACG--------------------------------AGTACACACGCCCCATGTGCTTCTTCTATGTGTGTTGGAACGAA
TTGTACTTATTTTCAAACATAATTTGTTGTTGATCACGTGT------------------------------------ACA
TGACTAACGCCGC-----ATGCATGCGCCACAGGAATGGGCGGAGGGGAGTGTGGAAGAG-AAGGTGCAGCGGTTGCTCA
AGACATGGGAGATGGAGATGTTCCACAAGTTGCGGCCCGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGC
AGCACCAACGGTGAGAC--CTCACTCCGTCAG--TCCG--------------------------------------TCCA
TCGATCT-TTCTGGCCACATAAGA------------------CACCAACGCTTTTCAC----CAGGGATGAAGCCTCTGA
CCCGAAAGGAGTGGACCGCCATCGGTGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTACGAC
CCGGACACAGAGACGTTCGACTCCGGCATGGAGACGTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTCGA
CGTCTACTGCACCGGCCCGCCCA------GGGTGGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGGCCGTTCAAGG
GCCACCCTCCTCACGGCCAGCGCGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTTTGGCATGCAGCTTGGTATAT
ACTCCATCCGTCTCAT----------------------------------------------------------------
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-------------------------------------------AATATAAGACGTTTTTGCAAATTATGTTAGGTTGCAA
AAATGTCATATATTGTGGGACAGAGGGAGTACCAAATT--------------------------TCGCGTTGC-------
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---------------------------ACAGTCAA-TTTTGTTCAGAGTT----------------------------GG
AACTTCACTTATATGATGCGCT----------------------------------------------------------
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-----------------------------GCTGCAACAATG--TAATGATAGGTTGATGAGGAGATGAAAGTGGAGAAGG
CAGAGTACTTCTACGAGCGCGGCAACTTCCTCGCGAGCTTCTTGAGCACGCCTGCTGCT------------GCTG-----
-CATCAGCTTCAGGTTGCCCTGTGATGAGAGGAAACTAACTGAAGCACCAAAGAAATTGAAGCATATATGTTGCTA----
-ATCAATGC------CCTGGATGATCACCTTCATATTTCAATTTGGGCTTATATTCCATTTCGTGACATTACAAATTTAC
AATATACAATGTTAAAATAAAGCAGTTTATTTGTTCGGTACAAACACCACTTCAGGTGTGCAAGTGTAAGAACTAAGAAC
CCCCACTTGGTTTGGAGGACATAACTATCGGAAGAGCTACATGCATGAAAATGACTC-----------------------
---------------------AAAGCATGCATGGCTACGCAAAATTGGACGAATGAGTATTTCTCTCGAAATTGGCTTTC
GCTCCACTTTCTAAATAAAGCAACCAGCACGTTTATGCAACAAGTCCATGAGCCGCACCGAAAATAAAATAGTCTACTGG
AGCAACGGCACAACTCCGCCC-AAAAA--AGCATAAAAGAAATAGGATAAATGGCC-CCCAGTAGCCGGGAGCTCAGTTG
ATCTGCGGTGACACAAGACGGCACATGGCAGCAGTCATCGCGTCCACCATGTGTCCATGACGGTCGTGATTCTGCTGTAT
AGATAGCGGGTGCAAGTGTTGCAAAAATGAAAGGAATTTGAAAATAGAGCCAGAGGCCCGCCTAAGAAAGATCCGCTCGA
TCACTATCATGTTACGCGTTGTCCATAGGGTCCAAGCTAGCGCCGCGAACACAAGCTGGAAGAGGCATCTCCTCCTCCAT
GTCTAGTTGGCACGGGTTTGGAGGAACCTAG-CAGGTCCGAGGCCTCTCAGTTAGGCCCATTGCCTCACTTTCAAAGCTC
CACAGGAATCCCGCCGTCGTGCAAGAGAAAAAAATGTGTGTCCCTCTCTCCGGCGCATCACAAAAGGGGGCACAACTTGT
CGCCAGGCTCGTGCCGCTTGAATACCTCCATTCCATATGGGAGGCAATCCTGCAACATTTGCCAAACAAAAATCTTAATC
TTCATAGGCATGTGCGCTTTCCAAAGCCAAAATCTCTAGGAGAGAGATGGCTACTGGCA
>chr6B_1
AACATCAAAGGACTTATTGCTCCATGAAGCTAAAACTCGTGCTGGGCCTGAGAGTCTGGACTTGAAGCAAAGGAGGGCCT
GTCTATCATTTTCAGTTTCCTTGCAGATGGCTAGTGGTAGGCTGCAAAGGAAGCAAAAGAGGTATAGAAACCAAACAAAG
CTTGGAAACAAGACAGCGGAAGATGGCATGGCTGTGGTAGGTTACGGCTATGGAGTGTAGAAATCAAAGTTCTCATGTGC
AGGAGGATGTCTAAGTACTCGGCTGTGGAGTGCGACGGCATGAATATATATTCACGGCTCAGCCATCAATATGGTGTGGT
GTGAACGGGGATGATGCAAGCAACACGACTTGCTTTTGAATCGATATCGGATTCGGCGTCCATCGAAACTAGTGCTTGCC
GACTGAAATAGTTTTGACTTGGAGGTGGTTGTTCAAAGCCAG-ACTTGCGAAATGAAATACTCCAACGCCAACTACTCCC
TCCGTTCTTTTTTATAAGACGTTTTGGACAGCTGACATCGAACTGTCTTGTGCTCTGTCTAAATTGTCTAAACGTCTTAT
AAAAGAGAACAGAGGGAGTAGTTGGTGTTGTGAGCATGCATTTGGAATG-------------------------------
---------------------------------CATGTAGTTGCCTGAGGTGCAGTGTGAATGCACGCTTCATCTTGAAG
AATAATGAGCTAAAAGTGGAGAAAACTAAATATATGTACTAACATCTTGGACACATCTGGGTTGGTGGATAGCATA---T
ACTAGTCATGTTTTTCCAATGCAGTGACGTTGGCGATGAGGCCCGCCGCTCAGATTTTT----------CCTATATGTAG
GGGATCAATCCTTCACTTGACTCTCA------------------------------------ACCTAGTACCAAGTTGCA
CCTTGAACTCCCCCGCAAAAAAAGAAAAAGTTGTACCTTGAACTGAGACGAAGGTAATTTAGCCAGCTATGGCGTCTGCT
GAAACAGGAGGCGACAAGTACCGGTCGTTCATGGACGGCCAGGGCGAGAAGAACACTGTGTGGAGGCATGGAGTCCCTCC
CAACTTCGACGTCGTGAACAAGCTCTTCGAGGAAGAGAGGACTAAGGTACC--------------CACAATATGTTGTTC
CACG--------------------------------AGTACACACACCCCCTGTGCTTCTTCTATGTGTGTCGGAACGAA
ATGTACTTATTTTCAAACATGATTTGTT------CACGCGT------------------------------------ACA
TGATTAACGCCGC-----ATGCGTGCGCCACAGGAATGGGCGGAGGGGAGTCTGGAAGAG-AAGGTGCAACGGTTGCTCA
AGACATGGGAGATGGAGATGTTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGC
AGCACCAACGGTGAGGCGTCATATACTTCGTCGTTCGG--------------------------------------TCCA
TCGATCT-TTCTTGCCACATAAGA------------------CACCAACACTTTTCAT----CAGGGATGAAGCCTCTGA
CCCGAAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTACGAC
CCGGACACGGAGACGTTTGACTCCGGCATGGAGACGTTCCTCACGGTGTTCCCCCAGGGCTTCGCCATCGAGGTGCTCGA
CGTGTACTGCACCGGCCCGCCTA------GGGTGGCCTTCAAGTTCCGGCACTGGGGATACATGGAGGGGCCGTTCAAGG
GCCACCCTCCACACGGCCAGCGTGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTTTGGCATGCAGCTTGGTATAT
ACTCCCTCCATCTCAT----------------------------------------------------------------
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-------------------------------------------AATATAAGACATTTTTGCATATTATGTTAGGTTGCAA
AAATGTCATATATTGTGGGACAGAGGGAGTACCAAATT--------------------------TCGCGTTGC-------
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---------------------------ACAGTCAA-TTTTGTTCAGAGTT----------------------------GG
AACTTCACTGATACGATTCGCT----------------------------------------------------------
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-----------------------------GCTGCAACAATG--TAATGACAGGTTGATGAGGAGATGAAAGTGGAGAAGG
CAGAGTACTTCTACGAGCGCGGCAACTTCCAGGCGAGCTTCTTGAGCACACCTGCTGCT------------GCTG-----
-CATCAGCTTCAGGTTGCCCTGTGATGAGAGGAAACTAACTGAAGCACCAAAGAAATTGAAGCATATATGTCGCTA----
-ATCAATGC------CCTGGATGATCACCTTCATATTTCAATTTGGGCTTATATTCCATTTCGTGACATTACAAATTTAC
AATATACAATGTTAAAATAAAGCAGCTTATTTGTTCGGTACAAACACAACTTCAGGTGTGCAGGTGTAAGAACTAAGAAC
CCCCACTTGGTTTGGAGGACATAACTATCGGAAGAGCTACATGCATGAAAATGACTC-----------------------
---------------------AAAGCATGCATGGCTACGCAAAATTGGATGAACGTGTATTTCTCTCGAAATAGGCTTTC
GCTCCACTTCCTAAATAAAGCAACCAACATGTTTATGCAACAAGTCCATGAGCCGCACCAAAAGTAAAATAGTCTACTGG
AGCAATGGCACAACTCCGCCCAAAAAA--AGCATAAAAGAAATAGGATAAATGGCCACCCAGTAGCCAGGAGCTCAGTTG
ATCTGCGGTGACACAAGACAGCACACGACAGCAGTCATCGCGTCCACCATGTGTCCATGACGGTCGCGATTCTGCTGTAT
AGATAGCAGGTGCAAGTGTTGCAAAAATGAAAGGAATTTGAAAATAGAGCCAGAGGTCCGCCTAAGAATGATCCGCTCGA
TCACTATCATGTTACGCGTTGTCCATAGGGTCCAAGCTAGCGCCGTGAACACAAGCTGGAAGAGGCATCTCCTCCTCCAT
GTCTAGTTGGCACGGGTTTGGAGGAACCTAGCCAGGTCCGAGGCCTCTAAGTTAGGCCCAGTGCCTCACTTTCAAAGCTC
CACGTGAATCTCGCCGTCGTGCAAGAGAAAATAATGTGTGTCCCTCTCTCCGGCGCATCACAAA-GGGGGCACAACTTGT
CGCCAGGCTCGTGCTGCTTGAATACCTCCGTCCCATATGGGAGGCGATCCTGCAACAATTGCCAAACAAAAATCTTAATC
TTCATAGGCATGTGCGCTTTCCAAAGCCAAAATGTCTAGGAGAGAGGTGGCTACTGGCA
>chr3B_778
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---------------------------------------------------------TGGGTTGGTGGATGGCATATACT
ACTAGTCATGTTTTTCCAATGCAGTGACGTTCGCAATGATGCAGTTCTCTACTTTTTTTTTCTTTACCCCCTACATGTAG
GGCATCAGCCTTTCACTCGACTCTCAGCTTCTAAAATACTTCTGATTT--------CTACTACC----------------
---------------------------AAGTTGTCCCCTGAACTGGGACGAAGGTAATTAGTC-----ATGGCGTCTGCT
GAAACAGGAGGCGACAAGTACAGGTCGTTCATGCACGGCGAGGGCGAGAAGAACACCGTGTGGAGGCATGGAGCCCCTCC
TAACTACGACGTCGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACG--------------CACCACTAAACCTAT
CCACGGAGGAAAGAGGTCCATGATGTACCCTGAATCA------------------------------------CACCAAT
TTCTACTGATTATTACTCTCTAGTATAAAAAACGCTCTTATATTATGGGACGAAGGAAGTATTTCTAAACTTTGTTCACA
TGATTAACAC----T-----------GCAACAGGAATGGCCGGAGGGGTCTCTCGAGGAGAAAGGTGCAGCGCTTGCTCA
AGACCTGGGAGATGGAGATGATCCACAAGGTGCGCCCCGACGACCAGAAGAGCGTCCACT---CCCAGGGATTCACCGCG
AGCACCAACGGTGAGACGCCGCAC---------------------------AGCAGC-----ACGCTTC----TACTCCG
TCCACCG-ATCTTGCGACATAAGAGAGACGGCCTTGTAACGGCACCAACGCTTGCTTATTTGCAGGGATGAAGCCTCTGA
CGCGGAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAACTGCCGCCGGAGCACCGCATCTACGAC
CCGGACGAGGAGACGGTTGACTCCGGCATGTCGACCTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTCGA
CGTGTACAG---CGGCCCGCCGA------GGGTCGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGCCCGTTCAAGG
GGCACCCTCCTCACGGCCAGCGCGTGGAGTTCTTTGGGGTCTGCATTTTCCACGTAAGTTTGGCAGCTTTGATAGTA---
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----------------------------CAGTCAACTTTTGTTCAGAGTT----------------------------GG
GACTTCACAGAATCACAGTAACAGTCTAACA-------------------------------------------------
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--------GAGTAGACACTGACATGGGTCGCTGCAACAATG--TGATGACAGGTTGATGAGGAGATGAAGGTGGAGAAGG
CGGAGTACTTCTACGAGCGCGGCAACTTCCTCGCAAGCTTCTTGAGCGCGCCTGCTGCT------------GCTGCTGCC
ACATCGGCTTCAGGTTGCCCTGTGATGAGAGGAAACT----GAAGCACCAAAGAAAC----------ATGTCGCTAATAT
CATCAATGC------CTTGGATGACCAGCTTCAGATTTCAAATTGGCTTTTGATTTCATGTCGTGACATTACAATGTTTG
AA----------TAAAGTGGCTTATTA----TGTTTGGTACAAACATCGCTTCGGGTGTGTAGGTGTAAGAAGCCCAACT
TGATTT----------GGACATCACTATCGGAAGAGCTACATG----AAAATGACTC-----------------------
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>chr6A_796
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---------------------------------------------------------------------------A---T
ACTAGTCATGTTTTTCCAATGCAGTGACGTTGGCGATGAGGCACGTCGCTCAGATTTTT----------CCTATATGTAG
GGGATCAATCCTTCACTTGACTCTCAGCTCAG------CTTCCGAATATTACTAACCTAGTACC----------------
---------------------------AAGTTGTACCTTGAACTGAGACGAAGGTAATTTAGCCAGCTATGGCGTCTGCT
GAAACAGGAGGCGACAAGTACCGGTCGTTCATGGATGGCGAGGGCGAGAAGAACACCATGTGGAGGCATGGAGTCCCTCC
CAACTTCGACGTCGTGAACAAGCTCTTCGAGGAAGAGAGGACTAAGGTGCC--------------CACCATATGTTCTTC
CACG--------------------------------A------------------------------------GAACAAA
TTGTACTTATTTTCAAACATAATTTGTT------CA--CGT------------------------------------ACA
TGATTAACGCCGCCCCGCATGCACGCGCACCAGGAATGGGCGGAGGGGAGTGTGGAAGAG-AAGGTGCAGCGGTTGCTCA
AGACATGGGAGATGGAGATGTTCCACAAGTTGCGGCCTGAGGACCAGAAGAGCGTGCACT---CCCAGGGATTCACCAGC
AGCACCAACGGTGAGAC--CTCAC---------------------------ACCGGC-----ACGTTTACAGATACTCTA
TCCACCGATTCTTGCCACATAAGAATAAGA------------CACCAACGCTTTTCAT----CAGGGATGAAGCCTCTGA
CCCGAAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCAACCAAGCTGCCGCTGGAGCACCGCATCTATGAC
CCGGACACGGAGACGTTCGACTCCGGCATGGAGACGTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTCGA
CGTGTACTGCGACGGCCCGCCCA------GGGTGGCCTTCAAGTTCCGGCACTGGGGGTACATGGAGGGGCCCTTCAAGG
GGCACCCTCCACATGGCCAGCGTGTGGAGTTGTTTGGCGTCTGCATTTTCCATGTAAGTTAATTTGGC------------
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---------------------------------------------ATAGAATCTCGCGCAATCGTCGAGTTGC-------
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---------------------------ACAATCAA-TTTTGTTCATTACAACAACTTGAC--------------------
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---------------------------------------TG--TCATGATAGGTCGATGAGGAGATGAAGGTGGAGAAGG
CAGAGTACTTCTACGAGCGCGGCAACTTCCTCGCGAGCTTCTTGAGCGCGCC---TGCTTCTGCTCCTACTGCTG-----
-CATCTGCTTCAGGTTGCCCTGTGATGAGAGGAAACTAACTCAAGCACCAAAGAAATTGAAGCATATATGTCGCTA----
-ATATCAGTGCCAAGCTTGGATGATCACCTTCATATTTCAATTTGGCTTT-GATTCCATTTCATGACATTACAAATTGAC
GATATACATTGTTAAAATAAAGTAGCTTATTTGCTTGGTACAAAGACCACTTCGGGTCTGCAGGTGTAAGAAGCT-----
--CCACTTGGTTTGGAGGACATAACTATCGGAAGAGCTACATGCATGAAAATGACTCGATGACAATGAACTTTCCCAACT
AGCTGTACTATATATTTACTCAAAGCATGCATGGCTACACAAAAATTGATGAACGTATATTTCTCTCGAAACAGGCTTTG
GCTCCACTTTCTAAATAAAGCAACCAACACGTTCATGCAACAAGTCCATGAGCCACACCGAAAGTAAAATAGTCTACTGG
AGCAACGACACAACTCCGCGC-AAAAGAGAGCATAAAAGAAAGAGGCTAAAAGGCCACCCAGTAGCCGGGAGCTCAGTTG
ATCTGCGGCGACACAAGA-GGCGCACGGCAGTAGTCATCGCGTCCATCATGTGTCCAAGACGGTTGCGATTCCGTTGTCT
AGATAGCATGTGCAAGTGTTGCAAAAATGAAAGGAATTTGAAAATAGAGTCAGAGATCCGCCTAAGAAAGATCTGCTCAA
TC---ATCATGTTATGCGTTGTCCTTAGGGTCCAAGCTAGCGCCGCGAACACAAGCTAGAAGAGGCGTCTCCACCTCCAT
GTCTGTTTGACATGGGTTTGGAGGAGCCCAGCCAGGCACAAGGCCTCTCGGTTAGGCCCAGTGCCTCACGTACAAAGGTC
CACAGGAATCTCGCCATCGTGCGAGAGAAAAGGATGAGCGTCCCTATCTCCGGCACATCACAAA-GGGGGCACAACTTAT
CGCCAGGGCCGTGCCGCTTGATCACCTCCATCCCATATGGCATGCAATCCTGCAACAGTTGCTAAACCAAAATCTTAATC
ATCATAGGCATGTGCGCTTTCCAAAGCCAAAATGTCGAGGAGAGAGA------------
>chr3A_997
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----------------------------------------------------------------AGCTATGGCTTCTGCT
GA---AGGAGGAGACAAGTACCGGTCGTTCCTGCACGGCGATGGCGAGAAGAACACCGTGTGGAGGCATGGAGCCCCTCC
CAACTACGACCTGGTGAACAAGCTCTTCGAGGAAGAGAGGACCAAGGTACCACTAAACCTGTCCACACGACATGTTTCTT
CACT--------------------------------ACTAATGCTTCACCAAAGTTCT----------------------
----------------------------------------T------------------------------------CCA
TGGTTAACACCGAGT-----------GCAACAGGAATGGCCGGAGGGGTCTCTGGAAGAG-AAGGTGCAGCGCCTGCTCA
AAAGCTGGGAGATGGAGATGGTCCACAAGGTGCGCCCCGAGGACCAGAAGAGCGTCCACC---CTAGGAATTACTCCGCG
AGCACCAACGGTGAGAC--CTGATCCGCA-----ACACAATCGGCCGGCCGCGCCCC-----TCAAAAATGAAATAATAC
CGTGTGCGC--------------------------------------------------TTGCAGGGCTGAAGCCTCTGA
CGCGGGAGGAGGTGACCGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAGCTGCCGCCGGAGCACCGCATCTACGAC
CCGGACAAGGAGACGGTCGACTCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTGGA
CGTGTACAG---CGGCCCGCCGA------GGGTCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGG
GCCACCCCCCTCACGGCCACCGCGTCGAGTTCTTTGGCGTCTGCATTTTCCACGTGAGTT--------------------
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>chr1A_1272
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--------------------------GCAACAGGAATGGGCCGAGGGGTCTGTGGAAGAG-AGGGTGCAGCGCTTGCTCA
AGACCTGGGAGATGGAGCTGGTCCACAAGGTGCGGCCCGAGGACCAGAAGAGCGTCCACC---CCAAGAATTACTCCGCC
ACCACCAACGGTACAAACATCAACACCTCAACACATACAATCGAACGGTCGACCGGC-----ACGAAAACAAAACTGAAA
CAAAACAAAT--------------------------------------------CTTTGTTGCAGGGCTGAAGCCGCTGA
CGCGGGAGGAGGTGACGGCCATGGGCGGCTACAACGCGTTCCTGGCGACCACGCTGCCGCCGGAGCACCGCATCTACGAC
CCGGACGCGGAGTCGGTGGAGTCGGCCACGTCCACCTTCCTCACGGCGTTCCCCCGGGGCTTCGCCATCGAGGTGCTGGA
CGTGTACAG---CGGCCCGCCCAATCCCGGGATCGCCTTCAAGTTCCGGCACTGGGGCTACATGGAGGGCCCGTTCAAGG
GCCACCCTCCGCACGGCCGCCGTGTCGAGTTCTTCGGCGTCTGTGTCTTCCATGTAAGTTTG------------------
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>chr5D_1272
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--------------------------GCAACAGGAATGGCCCGAGGGATCTCTGGAGGAG-AAGGTGCAGCGCTTGCTCA
AGAGCTGGGAGATGGAGATGGTCCACAAGGCGCGCCCCGAGGACCAGAAGAGCGTCGTCCGCTCCGACAACTACTCCGCG
AGCACCAACGGTGAGTGAGACCGCGCGGCACGGCCGATTTTAGCAGGACACAGAGGCAAACAACGAAACCAAAACCACAA
--------C--------------------------------------------------TTGCAGGGCTGAAGCCTCTGA
CGCGGAAGGAGCTGATGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCACCCTGCCGCCGGAGCACCGCATCTACGAC
CCGGACAAGGAGTCGGTCGAGTCAGCCACGTCCACCTTCCTCACGGCGTTTCCCCGGGGCTTCGCCATCGAGGTGCTCGA
CGTGTACAG---CGGCCCGCCCA------GGATCGCCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGG
GGCACCCCCCACACGGCCAGCGCGTCGAATTCTTTGGCGTCTGCATCTTTCATGTAAGTACTACGAAACTAACCGGAGGG
CAACGCACCTTCTGCTGCGCCGTTCTTCGGTTTTGGAATTAATTCTATGTTCAATCCAAGAGTTATTATGGCAATTTACA
TCCCATGCATTCCGTGAAGGTTTTTTCAGGTTTTATTACCTTATTCGTTTTCATATTTGTTTCTATTTTCTAATTCATGA
ATATTTTTTAAATTTATAAACATTTTCTGAAATTAGAGAACATAATTTAATTTTTCGAATATTAAAAAAACATGAATGTT
TTCTCCAAAATTGTGAACATTTTTTAACATCAATGATTTTTTTTTTCATATTCATGAACAGCTTTAAATTTACAAATTTC
TTAATCTGTGAACACTATTTGAAATTTGTGACCATATTGAAAAATGCATGAACAATTTTTCTAACTCATGGATATTTTCC
CTATTTGTGAAGAATTTATTAAATTTATGAACATTTTCTAAATTCAAGAATAATTTTTAAAATTTACAAAAAATCCAATG
TTTTCATTTTTAAGTGTTTTAATAGAATGTCGGTTTCGGTACGGGACGACCAACCCCTTACTAATGGGGTTCACTGTGAA
TTAAAAAAACTGAAGCTCTACTAGGTCTCTATTCCTAGGAATCTTAGTACTTGTAAGAAGGATTTGTGGCCATACATAGT
TTGTATGTTTGTTGTTCCAAGTTCAGTACAACAGAAACACTTCTAGGCTTATAGCTCAACCTGGGTGTAAACACTCTCTT
ATCTACTCTCTTCCTAAATATTACCTTATTCGTTTTCCTATTTGTTTCTATTTTTTAATTCGTGAATATTTTCAAATTTA
TAAACATTTTCTGAAATTCGAGAACATAATTTAGTTTTTCAAATATTAAAAAAACATAAATGTTTTCTCCAAAATTGTGA
ATATTTGTTAACATCAATGTTTTTTTTTCATATTCATGGAAAATTTTAAATTTACAATTTTTTAAATCTGTGAAGACTAT
TTAAAATTTGTGACAATTTTGAAAAATGCATGAACAATTATAAAACTTGTGAACAATTTTTCAAACTCATGAATATTTTT
TCCATATTTGCGAAGAATTTATTAAATTTATGAACATTGTTTAAATTCAAGAATATTTTTAAAAATTTATGATTTTTCAA
AAAGATTACAAAAAAATCCCAATGTTTTCATTTGTAAGTGTTTTAATAGAATGTCGGTTTCAGTATGGGACCACCAAACC
CTTACTAATGGGTTCACTTTGAATTAAAAAAAACTAAAGCTCTACTAGGCCTCTATTCCTGGGAATCTTCGTACTTGTAA
GAAAGATTTGTGGCCACACATAGTTTGTATGTTTGTTGTTCCAAGTTCAGTACCACAAAAACACTTCCAGGCTTGTAGCT
CAACCTGGGTGTAACACTCTCTTATCTACCATCAA-TTTTTTTTGTGGGAATAACTTTCGATCTATTCATCAACTGAAGG
TAGTACAAAGAATACCAGTAGTAAAAAGTACATTTAGGTACGTAGACCACCTAGCGACGACTACTTGCACTGGAGCGAGC
CGAAGGCGCGCCGCCGTCTTCGCCCCTACCTCATCGAAGCCGGGCAAACCTTGTTGTAGTAGACAGTCGGGAAGTCGTCG
TGCTAAGGCCCCATAGGACCAGCGCACCAGAACAACATCCGTTGCCGTTGAAGAGAAGCGTAGATCAGAAGGATCCAATA
TGTAGACACACGAACACAGACGAACGAAGACAAGATCCACATGGATCCACCGAAGACAAACGCCGACCGAATCCCGTAAG
ATCCACTGGAGACAAACCTTCATACGCCCTCCAATGATGCTAGAAACACTATCGGAACGGGGACAAGGCGGGGAGAACCT
TATTTCATCAGCAGAGAGCCGCCGCCGCCTCGCCTCTCTGAGCAGAACACAAACCCTAACAAAACTCAAAAGAGTATGAA
AAAACGGAGCCCTCCCGCCGGCAAGGGCCGGGATCCACCATGCCTCCATGGCCGTAAGACCATAGAAGACGAGGTAGACC
GACGGCGGCACCGGCGGGAGGCACAAGAAACCCTAGCCAAGGGGTCCTCTTTTCTTCCCGTGGAAGAAAGAAAACTAAGC
TTTATCTACCATCAATTTATGCATTGCAATCTGTCCATATACTTTTCTCTTCTTCTCTCTTCCAAACGAAACAACATAGA
TGACTTCAAATTTTGCACAGCCACAAAACATTATATATAAATAAAATGTATGACAAAGATTTCGGATATTTTGGTCCACC
AAAAATACTTAATATAATATTTCTTGGTCAAAAAATCTCAGTTTATATGTTTATGCTAGACAAAATTTCCTAAAGTAATG
TTACCTATTGTATTTCTAAGATTTGTTCACCTGCAAAATTTGAGTCTATATGTTGTTTTATTTGGGAGAAAAAAACTTTT
GTATAGTAAGTTAGTTAGTTTTTCTTTAAAGGAAACAGTAGAACAATCGTTCTACGGTATATATCAAAAAAGAGTGTAGT
AAGTTAGTTAGTTAGCACGAATCTCGATATAGTCATGGAAGGTGTTGATAATGGGTGTGGTACAAGCAGATTCACAAAAT
CCATTCTGGAGAAAACACTCATGATTATCTCTCCAACAATGTCTAATGATAGGTTGATGAGGAGATGAAGGTGGCCAAGG
TAGAGTACTTCTACGAGCGTGGCAACTTCCTCGCGGGCTTCTTGAGTGCGTC---TGCTTCTGCTACTA---CTG-----
-CACCGGCTTCAGGTTGCCCTGTGATGAGAGGAAACTAA-----------------------------------------
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>chr3D_1479
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--------------------------------------------------------------CAGGGATGAAGCCTCTGA
CGCGGAAGGAGTGGACGGCCATCGGCGGCTACAACGCGTTCCTGGCGACCAAGCTGCCGCCGGAGCACCGCATCTACGAC
CCGGACAAGGAGACGGTCGACTCCGGCATGTCGACGTTCCTCACGGCGTTCCCCAGGGGCTTCGCCATCGAGGTGCTCGA
CGTGTACAG---CGGCCCGCCAA------GGGTCACCTTCAAGTTCCGGCACTGGGGTTACATGGAGGGGCCGTTCAAGG
GGCACCCCCCACACGGCCAGCGCATCGAGTTCTTTGGCGTCTGCATTTTCCACGTAAGTTTGGCAGC-TTGATAGTG---
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----------------------------CAGTCAACTTTTGTTCAGAGTT----------------------------GG
GACTTCACAGAATCACAGTAACAGTCTAACA-------------------------------------------------
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--------GAGTAGACACTGACATGGGTCGCTGCAACAATG--TGATGATAGGTTGACGAGGAGATGAAGGTGGAGAAGG
CGGAGTACTTCTACGAGCGCGGCAACTTCCTCGCAAGCTTCCTGAGCGCGCC---TGCT------------GCTG-----
-CATCGGCTTCGGGTTGCCCTGTGATGAGAGGAAACT----GAAGCACAAAAGAAAC----------ATGTCGCTCATAT
CATCAATGC------CTTGGATGACCAGCTTCAGATTTCAAATTGGCTTTTGACTTCATGTAGTGGCATTACAATGTTTA
AA----------TAAAGTACAGTAGCTTATTTGTTTGGTACAAACACCACTTCGGGTGTGTAGGTGTAAGAA--------
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>SNPs
---------S----SS----------------------S---------------------------------------S-
---------------S---------------------S--------------------------S---------------
-------------------------S--------SS----S----S----------------------------------
--------------------S-------S---------------------------------------------------
-----------------------------------------------S-----S-----------S-S---S--S-----
-------S--------------------------------SSS------------------------------------S
--------------------------------------S-----------------S-----------------------
-S----S---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-S--S----------------------------------------------S-
-------------S-----------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-------------------------S--------
----------------------------SSSSSS----------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S---SS------S-------------------------------------------
------------S--------------------------------------------S----------------------
-------------------------S------------------------------------------------------
--------S-----------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S---S----------------------------------------------------------------------
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-----------------------------------------------------S--------------------------
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---------S---S------------------------------------------------------------------
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-----------------------------------------------------------------------S--------
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--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------------S---S-S----------------S-------
--------------------------S------------------------------------S----------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S-------------
-------S------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
----------S--------------------S--------------------------------S---------------
-------------------------------S-------------------------S----------------------
---------------------------------S-------------------------
>forward_442
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----------------------AGGTGGTTGTTCAAAGCCCA--------------------------------------
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>reverse_1658
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---------------------------------------------------------CCAGGGATGAAGCCTCTGAC---
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-----------------------------------------------------------
>forward_672
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------------CCTCCAACAGCACGAGGAAT------------------------------------------------
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>reverse_3450
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---------TATATGATGCGCTGCTGCAAC--------------------------------------------------
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>forward_1557
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-----------------AGACCTCACTCCGTCAGTCC-------------------------------------------
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>reverse_5417
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--------------------------------------------------------CCCGCCTAAGAAAGATCCGC----
--------------------------------------------------------------------------------
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-----------------------------------------------------------
