>input_sequence_60519
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------------------ATGCCCCCACCAAACCCTCAGCCTGGCCCATATGACAATCCATTATATGGCGCAAGCTCAGG
CCTGATTAAAACTGGGTTAGGAGTATATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGA
GCCTCCAAAGAACATTGATCTCCC-TGG-----------------------TGTTTCAAATCGCTTATGTATTCTCTCTA
AATTATTTATTGGCTCTACTCTTGCAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATACTGTTCCCGTTCCTTCACAGGGTATAT----TTGTCTTTCCCATCTACACTGGAT
ATGTATCTTGTTCTTCTGTCTATATATCGGGTGTACTGAAATATGTTCCGTCTTTCCTAGCTGCGCTGGATATGTTTCTG
GTTCTTTTATCTATCTGGTGTACTGAAATAGATTTTTTGCAATGATTTTTCAGGGGCACTGGACCCGGATAAGTGAGCCT
GTTGGTGGCCGGTTGTCATACAAACCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGG
TACCTTCATTATTCTTGCAGGCTTCACACTGGGCTTCATGGGAAAGTGCGTTTTTT-----------TTTTAACTTTCTT
CAGCCA--AAAAACAGTGACACTTCAAAATCACAGTTCCTAATGCACTTGAACCC-GTATGCAGGTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGGCTGATCGGATGGGGCCTACAGATCGTGTTCCTGAAAGGGCTCCTCTACTCGATGGG
CGGTGGCGAGGTGCCGCTGCTCGACCTGGTAGCCTACAGCGGG-TACCTGTTCGCAGGGCTCTCCCTGGCCATCGTCGCT
CGGCTCCTATGGGCCTACTCATACTACGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATTTTTTTGGTGAGGACGAT
GAAGCGGGTGATCTTCACGGAGATGCGGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCA
TCGTGCAGTTCCCCCTCTTCTTCTGGCTCGGCAGCATAGGCGCATGA---------------------------------
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------------------
>chr2A_1_TraesCS2A01G001100
TGCAGAATTAGATAGATATTCACAATACTTGTACCATGTGTATGTATGTATGTATGTATGTATGTACTCCGTCTCATAAT
GTAAGACTTTTTTTGACTCTAGTGTAGTGTCAAAAAACGTCTTACATTATGGGACGGAGGGAGTAGT-----ATTTAGCA
GCAGATGCAAAGAAAGAAAGAAAACAACATAATGCTAGCTAGGCTAGGCTAGGTGTACTTACTCAAACTCACATCTAGGA
ATGATGGTTCTGAGCTTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCACGTCTTTCTTTACTCATATACATACA
TACAGTCAATAACCGGAAAACAGTTAGCTAATCCTCCTCTGTCGCTAAACAAACAGTTAGCTAATCCTCCTCTGTCGCTA
AACAAACAGTTA-----------------GCCATAGAGGATCATAATGGTATATCTTTGTGTACTATCGCTAAACAAACA
GTTCTTCAAGGTGCAAGTTTCTGCAGATATTTCACATTTATCATGGGCAGACTTCAT-AATTATATGAATATATAGCAGT
ATGGGTGGCAGATATTATACCACATGCTCTGTACAATTTCGCTGTCATCTTTAGAAATTTTCACTTGTTTACACTACATA
TGGTAGAACAATTGAGATGCTATATTGATCTGTTGTGCGATGTGTTCTGTTGAAAATTTCTAGGAATTATTTGAATGGCA
TGACTAGT----------------------------------GCTTAAGTAATTGAAATTACTACCCTGCCTGGAAGTAT
CCAAGACCAAGATAAACTCTGTTCCCCCTTGTCTTATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGTT
ATCCTTTAATTTAATATAATAATGCCGTGTTGACATTTTACTTCAGTTAATTTTCTACGGCCACCGTGCATATGTCAATA
TCCATTTATCAATTCGCATTGGATTTATTA-TAACTCTGCTTCCTTCTATGCAGCCATGTATGATAACTACAGAAATCCC
CATCCTCCCGGGATGCAGATGCCCCCACCAAACCCTCAGCCTGGCCCATATGACAATCCATTATATGGCGCAAGCTCAGG
CCTGATTAAAACTGGGTTAGGAGTATATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGA
GCCTCCAAAGAACATTGATCTCCC-TGG-----------------------TGTTTCAAATCGCTTATGTATTCTCTCTA
AATTATTTATTGGCTCTACTCTTGCAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATACTGTTCCCGTTCCTTCACAGGGTATAT----TTGTCTTTCCCATCTACACTGGAT
ATGTATCTTGTTCTTCTGTCTATATATCGGGTGTACTGAAATATGTTCCGTCTTTCCTAGCTGCGCTGGATATGTTTCTG
GTTCTTTTATCTATCTGGTGTACTGAAATAGATTTTTTGCAATGATTTTTCAGGGGCACTGGACCCGGATAAGTGAGCCT
GTTGGTGGCCGGTTGTCATACAAACCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGG
TACCTTCATTATTCTTGCAGGCTTCACACTGGGCTTCATGGGAAAGTGCGTTTTTT-----------TTTTAACTTTCTT
CAGCCA--AAAAACAGTGACACTTCAAAATCACAGTTCCTAATGCACTTGAACCC-GTATGCAGGTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGGCTGATCGGATGGGGCCTACAGATCGTGTTCCTGAAAGGGCTCCTCTACTCGATGGG
CGGTGGCGAGGTGCCGCTGCTCGACCTGGTAGCCTACAGCGGG-TACCTGTTCGCAGGGCTCTCCCTGGCCATCGTCGCT
CGGCTCCTATGGGCCTACTCATACTACGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATTTTTTTGGTGAGGACGAT
GAAGCGGGTGATCTTCACGGAGATGCGGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCA
TCGTGCAGTTCCCCCTCTTCTTCTGGCTCGGCAGCATAGGCGCATGAGAT----AGTCTTCTC--------------TGT
AAATTTGGCACTAGAAAAAGCAA------CCACCTGTGAAGCTTAG--------------GCACATCCAGTAGCTTGTGC
AGGCTCTCTGAGCATCATCATATATGTTTTGTTGACAGGGGTTTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCA
GTCGGTCACCATTTTGTAGTATGTTTGTTGGAATGGTCTCAAGTATATTCATATAC------ATTGTTTATGT-------
-TATATATGTTTCTTTGTATGCTGTTGGATCTACCCTAGTTCACTCATCCTACTTAACTGGCATTGTTTGAATGTTCACT
CAGTGAAAGTATATGC---------------------CAGCTTCAGTCTGTCATTTGGTAGGTGCAGAGTATATATATAT
ACTGTCAGAAAATTCACCACATAAGTATGCATATTATTTCTGTTATT---CCATTGTATCTGGATTTTTTGATTTC-CTC
AGAGTTTTGGTCCAACAGCTTTTCTCAAAACAAGACAAACAAAATTGTATTTTGTTTATAAACTGATTTTCTTTGGATTT
TTGGTGAGGTATCCAGATTTACGCGTGATAACTATCCGTGCAGAAAAAAAATGAGATGCGTGCAATGTATGAAATGAATT
AGCAACAAGTGAACAAGTACTTAACAACGT--------TTAATGGATAAATTCTGAACGACCAAAAACAGAGCTTTGGAG
GGAACACAAAAGCAAAATAGGTTCCCAG---AATTCATTCTCAAGCACGACAACAAACGCTGTTGTCATGGATTTCACAG
CATGCAGTTGCACATTCCAACAACCATTCGTCAAAAATG---AGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAA
ACAGTGCAAAGGTCCGATGCAAAAAAAAAAAAAAAACAGTGCAAAGGTACGACGACTATGGGTACAAGAGCAAGAAGAAA
CTTTGGCATCTCAGAAGCCTGGCAACAAGCAAATACCCTGTCAAACTTAATATATTATTACAACTAGAGATCCCTTTCGT
CATTGTCACGAATCATAT
>chr2D_1
TGCAGAATTAGATAGATATTCAG---ACTTGTACCATGTGTATGTATGTATGTATGTACTCC----CTCTGTCCTATAAT
ACAAGAGCGTTTTTTACACTAGTGTAGTGTCCAAAACGCTCTTATATTATGGGACGGAGGGACTGAGGGAGTATTTAGCA
GCAGACGC----AAAGAAAGAAAACAACATAATGCTAGCTAAGCTAGGTGTAC------TACTCCAACTGACATCTATGA
ATGATGGTTCTGAACCTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCACG----TCTTTACTCATATACATACA
TACAATCAATAAGCGGAAAATGGTTAGCTAATCCTCCTCTGCCAGTAGCTTGCTTCCCTACTCCCAGCGAGTCGTGTCGC
TCTTGTACTGGTGGAGTTCTCTTCTTCTTGCCATAGAGGATAAAATCTT----------TCTACCATCACTAAACAAACA
ATTCAG---GGTGCAAGTTTCTGCAGATATTTCACATTTATCATGGGCAGACTTCATAAATGATATGAATATATAGCAGT
ATGA----CAGATATTATACCAGATGTTCTGTACAATTTCTCTGTCATATTTAGAAATTTTCACTTGTTTACACTACATA
TGGTAGAACAATTAAGATGCTATATTGATCTCTTGTGTGATGTGTTCTGTTGAAAA------------------------
-------T----------------------------------GCTTAAGTAATCGAAATTACTACCCTGCCTAGAAGTAT
------CCAAGATAAACTCTGTTCCCCCTTGTCTCATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGC-
---------TTTAATTTAATAATGCTGTGTTGACATTTTACTTCAGTTAATTTTCTACGGCCACCGTGCATATGTCAGTA
TCCATTTATCAATTGGCATTGCATTTATTTT-AACTCCGGTA-CCTTTTTGCAGCCATGTATGATAACTACAGAAATCCT
CATCCTCCCGGGATGCAGATGCCCCCACCAAACCCTCAGCCTGGCCCTTACGACAATCCATTGTATGGTGCCAGCTCGGG
TCTGATTAAAACTGGGTTAGGAGTATACGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGA
GCGTCCAAAGAACCTTGATCCCCC-GGG-----------------------TGTTTCAAATCGCTCACATATTCTCTCTA
AATTA-TTATTGGCTGTACTCTTGCAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATACTGTTCCCGTTCCTTCACAGGGTATGT----TTGTCTTTCCCATCTACACTGGAT
ATGTATCGGGTTCTTC--------TATCTGGTTTACTGAAATG-AAGTC-------------------------------
-----------------------------------TTTGCAATGGCATTTCAGGGGCACTGGACTCGGATAAGTGAGCCT
GTGGGTGGCCGGCTGTCGTACAAACCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTCGG
CACCTTCATTATTCTAGCAGGCTTCACACTAGGCTTCATGGGGAAGTGAG--TTTTC----------TTCTTACTTTCTC
CAGCCACGCAAAACAGTGACACTTCAAACCTGGGGTTCCTAATGCACTTGATATCGATATGCAGGTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGGCTGATTGGATGGGGCCTACAGATCGTGTTCCTAAAAGGGCTGCTCTACTCGATGGG
CGGAGGCGAGGTGCCGCTGCTCGACCTGGTGGCCTACAGCGGG-TACCTGTTCGCGGGGCTCTCCCTGGCCATCGTCGCC
CGGCTCCTATGGGCCTACTCATACTATGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCTTGGTGAGGACGAT
GAAGCGGGTCATCTTCACGGAGATGCGGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCA
TCGTGCAGTTCCCCCTCTTCTTCTGGCTCGGCAGCATAGGCGCATGAGAT----AGTCTTGTC--------------TGT
AATCTTGGCACTAGAAAAAGAAAAAGCAGCAACCTGTGAAGCTTAGGCGCATTCAGTATAGCACATCCAGTAGCTTGTGC
AGGCTCTCTGAGCATCATCATACATGTTTTGTTGACAGGG--TTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCA
GTTGGTCACCATTTTGTAGTATGTTTGTTGGAATAGTCTCAAGTATATTTAT---------TATTTATTATTTATGTTAC
ATATATATGTTTCTTTGTATGTG------------------CACTCATCCTACTTAACTGGCATTGTTTGAATGTTCGGT
CAGTGAAAGTATATGGATTTTCGACGATAAAGACAGTCAGCTCCAGTCTGTCATTTGGTAGATGCAGAGTATATATA--T
ACTGTCAGAAAATTCACCACAGAAGTATGCATATTATTTCTGTCATTATTCCATTGTATCTG-ATTTTTTGAATCT-AAA
AGAGATTTGGTCTAACAGTTTTTCCCGAAACAAGACAAACAAATACGTATTTTGTTTATAA-CTGATTTTCTCAGGATTT
TTGGTCAAGTATCCAGATTTACGCGTGATAACTATCCATGCAGAAAAAAATGAGACGCTG-GCTATGTATGAAATGCATT
AGCAACAAGTGAACAAAGTGGTTAACAAAAGATTTATGTTGATGGATAAATTCTAAACGACCAAAAACACAGCTTTGGAG
GGGACACAAAAGCAAAATAGATTCCCAGGTACCAATTCTCAAG-----------------------CATGGATTTCACCG
CACGCAGTTGCGCATTCCAACAGCCATTCGTCATCAAAATGTAGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAA
AC-----------------------------------AGTGCAAAGGTACAACGACTATGGGTACAAGAGCAAGAAGAAA
CTTTGGCATCTCACAAGCCTGGCAACAAGCAAATACCCTGTCAAACTTAATATATTATTACAACTAGAGACCCCTTTCGT
CATTGTCACGAATCATA-
>chr2B_143
GTAT----------------------------------------------------------------------------
----------------------------------------------------------------------GTATTTAGCA
GCAGACGC----AAAGAAAGAAAACAACATAATGCTAGCTAGGCTAGGTGTAC------TACTATAACTGGCATCTAGGA
ATGATGGTTCTCAGCTTGCATATCCTTTACCAACTCAACTGCTTGCTATTTCCTCG----TCTTTACTCATACACATCAA
TAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GCAGATATTATACCAGATGTTCTGTACAATTTCTCTGTCATCTTTAGAAATTTTCACTTGTTTACACTACATA
TGGTACAACAATTAAGATGCTATGTTGATCTCTTGTGTGATGTGTTCTGTTGAAAA------------------------
-------TTTCTAGGAATTATTTGAATGGCATGACTAGTAGTGCTTAAGTAGTCGAAATTACTACCCTGCCTGCAAGTAT
------CCAAGATAAACTCTGTTCCCCCTTGTCTCATCATGTACCTGTTGGTTTTGCACGGTTGCACCTTATGTTATGTT
ATGCTTTAATTTA--ATAATAATGCTGTCTTGACATTTTACTTCAGT---------------------------------
--------TCAATTGGCATTGCATTTATTTTTAACTCTGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCT
CATCCTCCCGGGATGCAGATGCCCCCACCAAACCCTCAGCCTGGTCCCTATGACAACCCATTGTATGGCGCAAGCTCGGG
TCTGATTAAAACTGGGTTAGGAGTATATGGGGAGAAGTTCTTCGGCTCCAGTTCAGAATTCATGCAGAGCAATGTAAGGA
GCCTCCAAAGAACCTTGATCCCCC-TGG-----------------------TGTTTCAAATCATTCACGTACTATCTCTA
AATTATTTATTGGCTCTACTCTTGCAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATACTGTTCCCGTTCCTTCACAGGGTATGT----TTGTATTTCCCATCTACACTGGAT
ATGTATTGGGTTCGTCTGTCTATATATCTGGTGTACTGAAATC-AAATG-------------------------------
-----------------------------------GTTGCAATGGCATTTCAGGGGCACTGGACTCGGATAAGTGAGCCT
GTTGGTGGCCGTTTGTCATACAAACCTCCAATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTCGG
TACCTTCATTATTCTCGCAGGCTTCACACTAGGCTTCATGGGGAAGTGAG--TTTTC----------TTCTTACCTTCTC
CAGCCACGCGAAACAGTGACACTTCAAACCTGGGGTTCCTAACGCACTTGATATCGATATGCAGGTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGGCTGATCGGATGGGGCCTACAGATTGTCTTCTTAAAAGGCCTCCTCTACTCGATGGG
CGGTGGCGAGGTGCCGCTGCTCGACCTGGTAGCCTACAGCGGG-TACCTGTTTGCGGGGCTCTCCCTGGCCATCGTCGCC
CGGCTCCTGTGGGCCTACTCATACTACGTGATGATGCCGTGGATGAGCCTGTGCATGGGGATCTTCCTGGTGAGGACGAT
GAAGCGGGTCATCTTCACGGAGATGCGGGGCAGCGAGAGGCACTCGACGCGGCAGCACTACTTCCTGCTCTTCATGGCCA
TCGTGCAGTTCCCCCTCTTCTTCTGGCTCGGCAGCATAGGCGCATGAGAT----AGTCTTGTC--------------TGT
AATCTTGGCACTAGAA----AAAAAGCAGCCACCTGTGAAGCTTAGGCGCATTCAGTATAGCACATCCAGTAGCTTGTGC
AGGCTCTCTGAGCATCATCACATATGTTTTGTTGACAGGG-TTTTTGTGTTTGGTTTTGTATAAAGTTGTGAATTTTGCA
GTTGGGCACCATC-TGTAGGATGTTTGTTGGAATAGTCTCAAGTATATTTATATTTATACTTATTGTTTATGT-------
-TATATATGTTTCTTTGTATGTTGTTGGATCTACCCTAGTTCACTCATCCTACTTAACTGGCATTGTTTGAATGTTCATT
CAGTGAAAGTATATGGATTTTCGATGATAAAGACAGTCAGCTCG-----------------------------TATA--T
ACTGTCAGAAAATTCACCACAGAAGTATGCATATTATTTCTGTTATTATTACATAGTATCTG-ATTTTTTGAACCTAAAA
AGAGATTTGGCCTAACAGTTTTTCTCAAAACAAGACAAACAAATATGTATTTTGCTTATAA-CTGATTTTCTTTGGATTT
TTGGTGAAGTATCCAGATTTACGCGTGATAACTATCCGTGCAGAAAAAACGAGACA-CTG-GCAATGTATGAAATGCATT
AGCAACAAGTGAACAAGTGCAAAAGCAAAATAGGAAACC------------------------------CAGCTTTGTTG
AGAACACAAAAGCAAAATAGGTTCCCAGCTGAATTCATTCACAAGCACGGCAACAAACACGGTTATCATGAATTTCACAT
CATGCAGTTGCACATTCCAACAGCCATTCGTCATCAAAATGTAGTAGTAGAAACTTGAAAGGGCGCGCCGTTCGTATTAA
AC-----------------------------------AGTGCAAAGGTACGACGACTATGGGTACAAGAGCAATAAGAAA
CTTTGGCATCTCACAAGCCTGGCAACAAGAAAATACCCTGTCAAACTTGAT--ATTATTACAACTAGAGACCCCTTTCGT
CATTGTCACGAATCATAT
>chr5A_841
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-----------------AATAATGTTGTGTTGACATTGTACTTCATTTAATTTTCTACAACCACCATGC--ATGTCAGTA
TCCATTTATCAATTGGCATTGCATTTATTTT-AACTCCGCTT-TTTCTTTGCAGCCATGTATGATAACTACAGAAATCCT
CATCCTCCTGGGATGTAGATACCCCCACCAAACCCTCAGCCTGGTCCCTATGACAATCCATTGTATGGTGCTAGCTCTGG
CCTGATTAAAACTGGGTTAGGAGTATATGGGGAGAAGTTCCCCGGCTCCAGTTCAGAATTCATGCACAGCAATGTAAGGA
GCCTCCAAAGAACCTTGATCCCCCCTTGGTGTTTCAAATCACTCACATATTTGTTTCAAAACGCTCACATATCCTCTCTA
AAATATTTATTGGTTGTACTCTTGCAGATCAGTAGATACTTCTCCAACCCATAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATATTGTTTCCGTTCCTTCACACGGTATATCA-----TATTTCCCAGCTGCAATGGAT
ATGTTTTTGGTTCTTCTATCTATATATCTGGTGTACTGAAATG-AAATA-------------------------------
-----------------------------------GTTGCAATGCCTTTTCAGGGGCACTGGACTCGGATAAGTTAGCTT
GTGGGTGGCCGGCTGTCCTACAAACCTCCGATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGG
TACCTTCATTATTATTGCAGGTTTCACACTGGGCTTCATGGGAAAGTGAG--TTTT-----------TTTAAACTTTCTT
CAGCCA--CAAAACAGCGTCACTTCAAAATCACAGTTCCTAATGCACTCGAACCC-ATATGCAGTTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGACTGATCAGATGGGGCCTACAAATC--------------------------------
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>chr3D_841
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-----------------AATAATGTTGTGTTGACATTTTACTTCATATAATTTTCTACGACCATCATGC--ATGTCAGTA
TCCATTTATCAATTGGCATTGCATTTATTTT-AACTCCGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCT
CATCCTCCTGGGATGCAGATACCCCCACCAAACCCTCAGCCTGGTCCCTATGACAATCCATTGTATGGTGCTAGCTTGGG
CCTGATTAAAACTGGGTTAGGAGTATATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAATTCATGCACAACAATGTAAGGA
GCCTCCAAAGAACCTTGACCCCCCCCTGGTGTTTCAAGTCACTCACATATTTGTTTCATAACGCTCATATATTCTCTCTA
AATTATTTATTGGTTGTACTCTTGCAGATCAGTAGATACTTCTCCAACCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATAATGTTTCCGTTCCTTCACAGCATATATCT-----TCTTTCCTAGCTGCACTAGAT
GTGT---------------------------TGTACTGAAATG-AAATG-------------------------------
-----------------------------------GTTGCAATGCCTTTTCAGGGGCACTGGACTCGGATAAGTGAGCCT
ATGGGTGGCCGGCTGTCCTACAAACCTCCGATGTACGACATAAATGCGCCAGATCTGTACATCCCTTTCATGGCGTTTGG
TACCTTCATTATTATTGCAGGCTTCACACTGGGCTTCATGGGAAATGAG--TTTTT-----------CTTAAACTTTATT
CAGCCA--CAAAACAACGTCACTTC-AAATCATAGTTCCTAATGCACTCGAACCC-ATATGCAGGTTCACTCCAGAAGCC
ATAAACCTTCAGTTCACAAGAGGATTGATCGGATGGGGCCTACAAATCGT------------------------------
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>chr2D_928
TTATC---------------------------------------------------------------------------
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----------------------------TTT-ACCTCCGCTT-CTTCTTTGCAGCCATGTATGATAACTACAGAAATCCT
CATCCTCCTGGGATGCAGATCCCCCCACCAAATCCACAGCCTGGCCCATACGACAATCCATTGTACGGCGCAAGCTCAGG
TCTGATTAAGACTGGGTTAGGAGTGTATGGGGAGAAGTTCCTCGGCTCCAGTTCAGAGTTCATGCAGAGCAATGTAAGGA
GCCTCCAAAGAACCTCGACCCCCCAGGG-----------------------TGTTTCGTATCTCTCACAAACTATCTCTA
AATTATTTATTGGCTGTACTCTTGCAGATCAGTAGATATTTCTCCAATCCACAGTACTACTTCCATGTGAATGATCAGTA
TGTCAGGAACAAGTTGAAAGTCATACTGTTCCCGTTCCTTCATAGGGTATGTTTCGTTGTCTCTCCCATCTACGCTGGAT
ATAGTTCTGGTTCTTCTATCTA----TCTGGTGTACTAAGGTAAAAATA-------------------------------
-----------------------------------TTTGCATTGCCTTCTCAGGGGCACTGGACTCGGATAAGTGAACCT
GTGGGTGGCCGGTTGTCGTACAAACCTCCAATGTATGATATAAATGCGCCAGATTTGTACATCCCTTTCATGGCGTTTGG
TAGCTTCATTATCCTCGCGGGCTTCACATTAGGCTTCATGGGAAAGTGAG--TTTTCCCTTCTTCCTTTTTAACTTTCAT
C---CA--CAAAACAGTGAGACATCAAACCCAGCGTTCCTAAAGCACTAGGTATCC--ATGCAGGTTCACTCCAGAAGCT
ATCAATCTCCAGTTCACAAGAGGACTAATCGGATGGGGCCTATAGATCGTGTTCCTGAAGGGGCTCCTCTACTCAATGGG
CGGGGGCGAGGTGCCGCTGCTTTACCTGGTTGCCTACAGCGGGGTATCTGTTCGCTGGGCTATCCCTGGCCATCGTCGCC
CGGCTCCTATGGTCCTACTCGTACTACGTGATGATGCCGTGGATGAGCATGTGCATGGGGATCTTCCTGGTGAGGACGAT
GAAGCGGGTGATCTTCACAGAGATGCGGGGCAGCGAGAGGCACTCGACGCGTCAGCACTACTTCCTGCTCTTCATGGCCA
TCGTGCAGTTCCCCCTCTTCTTCTGGCTCGGTAGCATAGGCGCATGAGATGGATAGTCTTCTCTCTGGTGTTCCCCTTGT
AATTTTGCCACCAGAG----GAAAGTT----ACCTGTGAAGCTTAGTTGCGTT--------------CAGTAGCTTGTGC
AGGCTCTCTGAGCA-CATCACATATGTTATATTGACAGGG--TTTTGTGCTTGGTTTTGTA--AATTTGTGAATTTTGCC
ATTAGTCACTCTCTTGTAGGATATTTG-TTGAATAATCGCAAGTATATACAT---------TATTACTTTTGT-------
-TATATAT------------------------------------------------------------------------
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------------------
>SNPs
----------------------SSSS--------------------------------SSSSSSSS---S---SS-----
SS----SSS-----S--S-------------S----SSS-----S-----------------S-SSS-------------
-----S--SSSS------------------------------------SSSSSSSSSSS-----S----S----------
--------------------------------------------------------SSSS--------------------
----S-------S-------SS-------------------S-SS--SSSSSSSSSSSSS--SSSSSSSSSSS--SS-SS
SSSSSSSSSSSS-----------------------------S-S-SSSSSSSSSSSSSS-S---S---S-----------
S---SSSSS----------------------------------------------------S------------------
---SSSS---------------S---S-------------S---------------------------------------
-------------S-----------------S-----S------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS----------------------------------------------S--------------------------
SSSSSS----------------------------S---------------------------------------------
--S----------------------S---------------------------------------------------S--
--------------S------S-------S------------S-----S------------------------------S
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------S------S--------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------S--------------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------SS------------------S---------------
--------------------------------------------------------------------------------
------------------------------------------------S-S-----------------------------
--------S-----------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----------------------S
--------------------------------------------------------------S--S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------S-----------------------------------------------------------
----------------------------------------S---------------------------------------
--S-------------------------------S-------------------SS------------------------
---------------------S--------------------------------------------------------S-
---------------S--------------------------S------------------S---------------SS-
---------------------S----------------------------------------S---------S-SS-SSS
----S-------S-----S------------------------SS----------------S------------------
-------S------------------------------------------SS--S-SSS-S---------------S---
------------------S-S---SS-SSS----------S-------------S--------------S----------
----------------------------------------S--------S--------S-S---S---------------
----------------------S----------SS--SS-----------------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
-------------S--------------------------------------------------------S---------
------------------
>forward_216
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------------------------------------AGCTAGGCTAGGCTAGGTGT------------------------
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>reverse_1486
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---------------------------------------------TTCCGTCTTTCCTAGCTGCG---------------
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>forward_958
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----------------------------------------------------------GGCCACCGTGCATATGTCAA--
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>reverse_3001
--------------------------------------------------------------------------------
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----------------------------------------TCAAGCACGACAACAAACGC--------------------
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------------------
