>input_sequence_60477
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------------------------------------------------------------ATGGCAACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCCGCGGGTTTCATCGCGTCCCACGTGGCAAACCGTTTGGTCAGGAATTACCCTTGCTACA
ACATCGTCATCCTTGACAGGGTTGACTACTGCTCCAGCCTTAGAAACCTCGACCCTTCTCGTGGATCCCCGAATTTCAAG
TTTGTCAGGGGCGACATTGCCAGTGCCGACTTGGTGAACCACCTCCTGGTCACCGAATCGATCGATACCGTCATGCACTT
TGCTGCCCAGACTCATGTCGACAACTCCTTCAGCAGTTCCTTCGAGTTCACCAAAAACAATGTCTACG--------GTAC
CCATGT-------CCTCCTTGAGGCATGCAAGCAGGTTA---AGATCAGAAGGTTC----ATTCATGTCAGCACCGATGA
AGTCTACGGAGAAACTGATGTCAATGCTGTTGTTGGTAACCATGAGGAATCTCGGCTGCTTCCGACGAACCCTTATTCGG
CTACAAAAGCCGGGGCGGAGATGCTGGTGATGGCCTATGCAAGGTCCTATAATCTTCCGGTGATCACCACGCGAGGTAAC
AATGTGTATGGGCCAAACCAGTTCCCTGAGAAGCTCGTCCCCAAATTTGCTCTCCTGGCAATGAGAGGCCTGCCACTCCC
GGTTTATGGGAATGGCTTGAATGCCAGGAGCTACTTGTACTGTGAGGAT----GTTGCTGAAGCCTTTGATGTTGTTC--
------TTCACAGAGGAG---AGGTTGGGCATGTGTATAACATCGCCGCGGCTAAGGAGAGGGGAGTGGTGGATGTGGCC
AGGGACATATGTGAGATTCTTGGGGTGGACCCCGAGAAGGCCATCAGGTTCGTGGAGGACAGGCCGTTCAATGACCAGAG
GTACTTTGTGGACGGTGAGAAGATGAGGAGGCTGGGGTGGTCGGAGCGCACAACGTGGGAGGAGGGACTGAGGAAGACGG
TGGAGTGGTACGCCAACAATGCTGGTTACTGGGGAGATGTTGGCGTTGTCTTGCGAGGGCAGCATCGTAACTGGACGCAT
GCTGCCTCATCACCGCCAGCTGATGAAGCAGATAAGGATCCTACGTTGA-------------------------------
----------------------------------------------------------AAAGCGCAAGATCAAAGTGCAG
GGCAAAGTTATAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G327200
CCTGCCACCACCAACCCCAGGA-TTGGTTGAGTTCGTCTCCGCGCCGCCGCCGCCA---TCAATCTCCTCGGTGAGCCCC
CGTCCCCGTTCCCTTCCATCCTCCATTTTGTTTGTGCTAGATCTGAGGATACTGCAGTGGGTTTGACTTTGACGTCACCG
GAGACTCTGTTTGCGTGTTGTATCATATATGTCGCTGTCGTTAGAGCAAATTGATTTGTA--GGTCCGGATCCTATTATT
GCTCTGCCGGGCGCCGGCGCACTTCGCCGGTCGACATCAGCGGCATGGCCAGCTTTTGGCCCTCCTCAAGCTCCGGGCTC
TGCCGCTGTATCGACGCGCTTGTCCTGTCCGTCCGCAGCCGCCGCTCCTGCTGCAGAGCTCGATACCTCCGGCTTCATTT
CACTCTCACCGGGCGCAAGAGCCCCACGGGCATTCCGTCGAACATGACGTATGCAGTGGCGCGCGAGTCAAAATCAATGG
CAAATAG--------TAGAA---CGCTGGATGTTGGTAGCTGCCAGTGCCACTGCAACAACAGATTGGTAATGGAGCATG
GAGGTGCTCCAGG-GGAGAGGACCCAAGCCAATCCTCTCGCCGTAGCGGCCGCCCACTAAGCCACCGGGTCATAACAGTT
CTGG--GCCATACGACTTCTGGTGAATCACTACTCATGGAAGATTGGGGCCTAGACCTGCATTTTCAAAGAATTGAGACC
AACTTGAAATAGAAATGAGTTTACTCGCGAATTTTCATTTGAAATAGAATTGTAGTTTAATACTAATATCTGTGTTTGCA
AAAGGTGTTTGATGGTAGGGAATAGATCGAGCTACCTAATTTATTCAATTATTATTAGTTCCACAACTGTCTCTTGTTTC
CCCCGTTAAGCAATTAACAGCCTTGGTCTCACACGCTTGTGGTTGTGGCAATAATTCAGTCATTCTGCATCATCCTACAT
GCGAGTACTATGTAACAAGCACTAATTATTTGATTTTGTAGGTATATCAAGCCACTCCAGATGGCAACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCCGCGGGTTTCATCGCGTCCCACGTGGCAAACCGTTTGGTCAGGAATTACCCTTGCTACA
ACATCGTCATCCTTGACAGGGTTGACTACTGCTCCAGCCTTAGAAACCTCGACCCTTCTCGTGGATCCCCGAATTTCAAG
TTTGTCAGGGGCGACATTGCCAGTGCCGACTTGGTGAACCACCTCCTGGTCACCGAATCGATCGATACCGTCATGCACTT
TGCTGCCCAGACTCATGTCGACAACTCCTTCAGCAGTTCCTTCGAGTTCACCAAAAACAATGTCTACG--------GTAC
CCATGT-------CCTCCTTGAGGCATGCAAGCAGGTTA---AGATCAGAAGGTTC----ATTCATGTCAGCACCGATGA
AGTCTACGGAGAAACTGATGTCAATGCTGTTGTTGGTAACCATGAGGAATCTCGGCTGCTTCCGACGAACCCTTATTCGG
CTACAAAAGCCGGGGCGGAGATGCTGGTGATGGCCTATGCAAGGTCCTATAATCTTCCGGTGATCACCACGCGAGGTAAC
AATGTGTATGGGCCAAACCAGTTCCCTGAGAAGCTCGTCCCCAAATTTGCTCTCCTGGCAATGAGAGGCCTGCCACTCCC
GGTTTATGGGAATGGCTTGAATGCCAGGAGCTACTTGTACTGTGAGGAT----GTTGCTGAAGCCTTTGATGTTGTTC--
------TTCACAGAGGAG---AGGTTGGGCATGTGTATAACATCGCCGCGGCTAAGGAGAGGGGAGTGGTGGATGTGGCC
AGGGACATATGTGAGATTCTTGGGGTGGACCCCGAGAAGGCCATCAGGTTCGTGGAGGACAGGCCGTTCAATGACCAGAG
GTACTTTGTGGACGGTGAGAAGATGAGGAGGCTGGGGTGGTCGGAGCGCACAACGTGGGAGGAGGGACTGAGGAAGACGG
TGGAGTGGTACGCCAACAATGCTGGTTACTGGGGAGATGTTGGCGTTGTCTTGCGAGGGCAGCATCGTAACTGGACGCAT
GCTGCCTCATCACCGCCAGCTGATGAAGCAGATAAGGATCCTACGTTGAAAAGCGCAAGATCAAAGTGCAGGGCAAAGTT
ATAAACTTTACACCCGTGCATCCATAGGCTGATGAAGCAGATGAGGATCCTACGTTGTAAAGCGCAAGATCGAAGTGCAG
GGCAATGCTATAAACTTTACACCCATGTATCCATAGGCACAGGAGGCAACAACACGATTCAGACCTCAAATAGGAGTGAG
TTTCCTGAGCTACTACTGCCATTGTG--------TCTTTGATTCCACACAACAGCTACGAGTGCACAGATTTTGCCTAAA
GGTTCAGTCTATTTTAATGGAGGCATGCCTTTCTTTCT-------------GATGAATTAATGAAGGCAGTTTAGTGGTG
ATTTGCTTACATCTTAAATCTTCATAATTATTTTACATGGATGAATTACGTATGTACGCGCAATGCCTTTTTCCATCTCC
AAAATCTAGTGCGTCACCTTGACTCGTAGAGAAAATCCCCTTTGTATCAGTGAATTACCCTAGTTGGACTCGAGGATATA
GCCAAGATTAATTATCTCCAAGATCAGTTGTCAGCCATAGG--------TGCTGGGAGCTTCTTAATCTAGTTGCAGTAC
GTAGCC-TTTTATTTATGGCAATGATAAATCCCGAACGTTCGGATTTTAAGCATGGCAACCCGAACGTTTTTTATGGCAA
CTTTAGTTCAGGTGAGGTTGGCAAACATTGCAATTTTCTAACAAAAAAACCAATTGGGACAAAGTTGCATGTCCTAACAA
CTGAAGTTGCCACCTCACATCAACTAAAGTTGCCATGTAAAACCGTTCGGGATGAAATGCTTAAAATCCGAACGTTCGGA
TTTTATCGGGGTCCTTTATTTAAGGCCGGTAATACTTTCAGGTATAGCGTGAATTCCGTCATTGAAAGTCTATACTCCAT
AGGGGCATCCCCGATCTCGCATTACCTTTAAAAAAAAGGACTACTCCAGATACTATAGACTGGATAGGTTTGTGATGCGT
TGGTCAATGTAACCATTAGTCTAACTGGCGCTGAGATTTCAAGAGATAACCTAAGCACCCTGATAGATTTTAAT
>chr1D_1
CCTACCACCACCATCACCAGGATTTGGTTGAGTTCGTCTCCGCGCCGCCGCCGCCA---TCAATCTCCTCGGTGAGCCCC
CGTCCCCGTTCCCTTCCATCCTCCATTTTGTTTGTGCTAGATCTGAGGATACTGCACTGGGTTTGACTTTGACGTCACCG
GAGACTCTGTTTGCGTGTTGTATCAT----GTCGCTGTCGTTAGAGTAAATTGATTTGTA--GGTCCGAATCCTACTATT
GCTCTGCCGCGCGCCGGCACACTTCGCCGGTCGACATCAGCGGCGTGGCCAGCTTTTGGCCCTCTTCAAGCTCCGGGCTC
TGCCGCCGTATGGACGCGCTTGTCCTGTCCGTCCCCAGCCGCCGCTCCTGCTGTAGAGCTCGATGCCTCCGGCTTCATTT
CCCTCTCACCGAGCGCAAGAGCCCCACGGGCATTCCGTCGAACATGACGTATGCAGTGGCGCGCGAGTCAAAATCAATGG
CAAATAG--------TAGTAGAGCGCTGGATGTTGGTAAC------TGCCACTGCAACAACAGATTGGTAATGGAGGTGC
TCCA--------G-GGAGAGGACCCAAGCCAATCCCCTCGCCGTAGCATTTTCA-------------------AACAGTT
CTGGGCGCCATACGACTTCTGGTGAATCACTACTCATGGAAGATTGGGGCCTAGACCTGCATTTTCAAACAAATGAGACC
AACCTGAAATAGAAATGAGTTTACTCGCGAATTTTAATATGAAATAGAATCGCAATTTAATACTAATATTTGTGTTTGCA
AAAGGTGTTTGATGGTAGGGAATAGATCGAGCTACTTAGTTTATTCAATTAT---TAGTTCCACAAGTGTCTCTTGTTTC
CCCCGTTAAGCAATTAACAGCCTTGGTCTCACACGCTTGTGGTTGTGGCAATAATTCAGTCATTCTGCATCATCGTACAT
GCGAGTGCTATGTAACAAGCACTAATTATTTGATTTTGTAGGTATATCAAGCCACTCCAGATGGCAACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCCGCGGGTTTCATCGCGTCCCACGTGGCAAACCGTCTGGTCAGGAATTACCCCCGCTACA
ACATCGTCATCCTCGACAGGGTCGACTACTGCTCCAGCCTTAGAAACCTCGACCCTTCCCGTGGATCCCCGAATTTCAAG
TTTGTCAGGGGCGACATCGCCAGTGCCGACTTGGTGAACCACCTCCTGGTCACCGAGTCGATCGATACCGTCATGCACTT
TGCTGCCCAGACTCACGTCGACAACTCCTTCAGCAGTTCCTTCGAGTTCACCAAAAACAATGTGTACG--------GCAC
CCACGT-------CCTCCTCGAGGCATGCAAGCAGGTTA---AGATCAGAAGGTTC----ATTCATGTCAGCACCGATGA
AGTCTACGGAGAAACTGATCTCAATGCTGTTGTTGGTAACCATGAGGAATCTCGGCTGCTTCCGACAAACCCGTATTCGG
CTACGAAAGCCGGGGCAGAGATGCTGGTGATGGCCTACGCAAGGTCCTATAATCTTCCGGTGATCACCACGCGAGGTAAC
AATGTGTATGGGCCAAACCAGTTCCCCGAGAAGCTCGTCCCCAAATTTGCTCTCTTGGCAATGAGAGGCCTGCCACTCCC
GGTTTATGGGAATGGCTCGAATGCCAGGAGCTACTTGTACTGTGAGGAT----GTTGCTGAAGCCTTTGATGTTGTTC--
------TTCACATAGGAG---AGGTTGGGCATGTGTATAACATCGCCGCGGCTAAGGAGAGGGGAGTGGTGGATGTGGCC
AGGGACATATGTGAGATTCTTGGGGTGGACCCCGAGAAGGCCATCAGGTTCGTGGAGGACAGGCCGTTCAATGACCAGAG
GTACTTTGTGGACGGTGAGAAGATGAGGAGGCTGGGGTGGTCGGAGCGCACAACGTGGGAGGAGGGACTGAGGAAGACGG
TGGAGTGGTACGCCAGCAATGCTGGTTACTGGGGAGATGTTGGCGTTGCCTTGCGAGGACAGCATCGTAACTGGACGTAT
GCTGCCTCGTCACCGCCAGCTGATGAAGCAGATGAGGATCCTACGTTGA-------------------------------
----------------------------------------------------------AAAGCGCAAGATCGAAGTGCAG
GGCAATGTTATAAACTTTGCACCCATGCATCCATAGGCACAGGAGGCAACAACACGATTCAAACCTCAAATACGAGTGAG
TTTCCTGAGCTACTACTGCCATACTGCCATTGTTTCTTTGATTCCACACAACTGCTACGAGTGCACAGATTTTGCCAAAA
GGTTCAGTCTATTTTAATGGAGGCATGCCTTTCTTTTCCTGATGAATTGTGGATGAATCAATGGAGGCAGTCTAATGGTG
ATTCGCTTACATCTTAAATCTTCATAATTCTTTTACATGGATGAATTACGTATGTATGTGCAATGCCTTTTTCCATCTCC
AATTTCTAGTGCATCACCTTGAGTCGTAGAGAAAATCCCCTTTGTATCAGTGAATTACGCTAGTTGGACTCGAGGATATA
GCCAAGATTAATTATCTCCAAGATCAGTTGTCAGCCATAGG--------TGCTGGGAGCTTCTTAATCTAGTTGCGGTAC
GTAGCC-TTTTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGGCTGGTAATACTTTCAGGTATAGCATGAATTCAATCATTGAAAATCTATACTCCAT
AGGGGCATCCCCTATCTCGCAATACCTTAGAAAAAAAAAACTACTCCAGATACTATAGACTGGATAGGTTTGTGATGCGT
TGGTCAATGAAACCATTAGTCTAA--------------------------------------------------
>chr1A_1
CCTACCACCACCACCACCAGGA-TTGGTTGAGTTCGTCTCCGCGCCGCCGCCGCCGCCGTCAATCTCCTCGGTGAGCCCC
TGTCCCCGTTCCCTTCCATCCTCCATTTTGTTTGTGCTAGATCTGAGGATATTGCACTGGGTTTGACTTTGACGTCACCG
GAGACTCTGTTTGCGTGCTGTATCAT----GTCGCTGTCGTTAGAGTAAACTGATTTGTACAGGTCCGAATCCTATTATT
GCTCTGCCGCGCGCCGGCACACTTCGCCGGTCGACATCAGCGGCATGGCCAGCTTTTGGCCCTCTTCAAGCTCCGGGCTC
TGCCGTCGTGTCGACGCGCTTGTCCTGTCCGTCCCTAGCCGCCGCTCCTGCTGTAGAGCTCGATGCCTCCGGCTTCATTT
CGCTCTCACCGAGCGCAAGAGCCCCACGGGCATTCCGTCGAACATGACGTATGCAGTGGCGCGCGAGTCAAAATCAATGG
CAAATACTCCTAGTATAGAA---CGCCGGATGTTGGTAGC------TGCCACTGCAACAACAGATTGGTAATGGAGGTGC
TCCA--------GTGGAGAGGACCCAAGCCAATCCCCACGCCGTAGCGGCCGCCCACTAAGCCGCCGGGTCATAACAGTT
CTGGGCGCCATACGACTTCTGGTGAATCACTACTCATGGAAGATTGGGGCCCAGACCTGCATTTTCAAACAAGTGAGACC
AACTTGAAATAGAAATGAGTTTACTCGCGAATTTTAATTTGAAATAGAATTGCAATTTAATACTAATGTCTGTGTTTGCA
AAGGGTGTTTGATGGTAGGAAATAGGTTGAGCTACTTAATTTATTCAATTAT---TAGCTCCACAAATGTCTCTTGTTCC
CCCCGTTAAGCAGTTAACAGCCTTGGTCTCACACGCTTGTGGTTGTGGCAATAATTCAGTCATTCTGCATCATCGTACAT
GCGAGTACTATGTAACAAGCACTAATTATTTGATTTTGTAGGTATATCAAGCCACTCCAGATGGCAACCTATGAGCCCAA
GAACATCCTCATAACCGGTGCCGCAGGTTTCATCGCGTCCCACGTGGCAAACCGTCTGGTCAGGAATTACCCGCGCTACA
ACATCGTCATTCTCGACAGGGTCGACTATTGCTCCAGCCTTAGAAACCTCGACCCTTCTCGTGGATCCCCGAATTTCAAG
TTTGTCAGGGGCGACATCGCCAGTGCCGACTTGGTGAACCACCTCCTGGTCACCGAGTCGATCGATACCGTCATGCACTT
TGCTGCCCAGACTCACGTCGACAACTCCTTCAGCTGTTCCTTTGAGTTCACCAAAAACAATGTGTACG--------GTAC
CCACAT-------CCTCCTCGAGGCATGCAAGCAGGTTA---AGATCAGAAGGTTC----ATTCATGTCAGCACCGATGA
AGTCTACGGAGAAACTGATGTCAATGCTGTTGTTGGTAACCATGAGGAATCTCGGCTGCTTCCGACGAACCCGTATTCGG
CTACGAAAGCCGGGGCAGAGATGCTGGTGATGGCCTACGCAAGGTCCTATAATCTTCCGGTGATCACCACACGAGGTAAC
AATGTGTATGGGCCAAACCAGTTCCCCGAGAAGCTCATCCCCAAATTTGCTCTCCTGGCAATGAGAGGCCTGCCACTCCC
GGTTTATGGGAATGGCTCGAATGCCAGGAGCTACTTGTACTGTGAGGAT----GTCGCAGAAGCCTTTGATGTTGTTC--
------TTCACAGAGGAG---AGGTTGGGCATGTGTATAACATCGCCGCGGCTAAGGAGAGGGGAGTGGTGGATGTGGCC
AGGGACATATGTGAGATTCTTGGGGTGGACCCTGAGAAGGCCATCAAGTTCGTGGAGGACAGGCCGTTCAATGACCAAAG
GTACTTTGTGGACGGTGAGAAGATGAGGAGGCTGGGGTGGTTGGAGCGCACAACGTGGGAGGAGGGACTGAGGAAGACGG
TGGAGTGGTACGCCAGCAATGCTGATTACTGGGGAGATGTTGGCGTTGTCTTGCGAGGGCAGCATCGTAACTGGACATAT
GCTGCCTCATCACCGCAAGCTGATGAAGCAGTTGAGGATCCTAAGTTGA-------------------------------
----------------------------------------------------------AAAGCGCAAGATCGAAGTGCAG
GGCAATGTTATAAACTTTACACCCATGCATCCATAGGCACAGGAGGCAACAACACGATTCAAGCCTCAAATAAGAGTGAG
TTTCCTAAGCTACTACTGCCATTGTG--------TC-----TTGCACACAACTGTTACGAGTGCACAGATTTTGCCTAAA
GGTTCAGTCTATTTTAATGGAGGCATGCCTTTCTTTTCCTG-----------ATGAATTAATGGAGGCAGTCTAGTGGTG
ATTTGCTTACATCTTAAATCTTCATAATTCTTTTACATGGATGAATTACA-----------AATGCCTTTTTCCATCTCC
AAGATCTAGTGCATCACCTTGAGTTGTAGAGAAAATCTCCTTTGTATCAGTGAATTACGCTAGTTGGACTCGAGGATATA
GCCAAGATTAATTATCTCCAAGATCAGTTGTCAGCCATAAGTGCTGGCCTGCTGGGAGCTTCTTAATCTTGATGCAGTAA
GTAGTCTTTTTA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGGCCGGTAATACTTTCAGGTATAGCATGAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4A_999
--------------------------------------------------------------------------------
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----------------------------------------------------------AGATGGCGACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCTGCGGGTTTCATTGCATCCCATGTGGCGAACCGTCTAATTAGGAGCTATCCTCACTACA
AGATTGTCGTCCTCGACAAGATTGACTACTGCTCCAACCTGAAAAATCTCAACCCTTCCCGGCCATCGCCAAATTTCAAG
TTTGTCAAGGGCGACATTGCAAGTGCTGACCTGGTGAACTATCTTCTCATCACTGAGTCGATTGACACCATCATGCACTT
TGCTGCCCAGACTCATGTGGATAATTCGTTTGGCAATTCCTTTGAGTTCACAAAGAACAACATATATG--------GCAC
CCACGT-------TCTCCTTGAGGCGTGCAAGGTTACTGGCCAGATCAGAAGATTT----ATTCACGTCAGTACTGATGA
GGTGTACGGAGAAACTGATGAGGATGCTGTGGTTGGTAACCATGAGGCCTCGCAGTTGCTTCCGACAAATCCATATTCAG
CTACCAAAGCTGGGGCTGAAATGCTTGTGATGGCTTATGGGAGGTCTTATGGTCTTCCTGTGATTACAACCCGAGGCAAC
AATGTGTATGGACCAAATCAGTTCCCTGAGAAGCTCATCCCAAAATTTATCCTTTTGGCCATGAAAGGCTTGCCCCTTCC
AATTCATGGTGATGGCTCTAATGTCAGGAGCTACCTGTACTGCGAGGAT----GTTGCTGAAGCTTTTGAGGTAGTTC--
------TTCACAAAGGAG---AGGTTGGACATGTGTATAATATTGGTACTGTGAAGGAGAGGAGGGTAATTGATGTGGCC
AGTGACATATGCAAGCTATTTGGCTTGGACACCGAAAAGGTCATCAGGTTTGTCGAGAACAGGCCCTTCAATGACCAGAG
GTACTTCCTGGATGATCAGAAACTGAAGAAGTTAGGATGGGCAGAGCGCACTACATGGGAAGAGGGTTTGAAGAAAACAA
TTGAATGGTACACCAGCAATCCTGATTACTGGGGAGATGTTG--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4D_999
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------AGATGGCGACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCTGCGGGTTTCATTGCATCCCATGTGGCGAACCGTCTAATTAGGAGCTATCCTCACTACA
AGATTGTGGTACTCGACAAGATTGACTACTGCTCCAACCTGAAAAATCTCAACCCCTCCCGGCCATCGCCAAATTTCAAG
TTTGTCAAGGGCGACATCGCAAGTGCTGACCTGGTGAACTATCTTCTCATCACTGAGTCGATCGACACCATCATGCACTT
TGCTGCCCAGACTCATGTGGATAATTCGTTCGGCAATTCCTTTGAGTTTACAAAGAACAACATATATG--------GCAC
CCACGT-------TCTCCTTGAGGCGTGCAAGGTCACTGGCCAGATCAGAAGATTT----ATTCACGTCAGTACTGATGA
GGTGTATGGAGAAACTGATGAGGATGCTGTGGTTGGTAACCATGAGGCCTCGCAGTTGCTTCCGACAAATCCATATTCAG
CTACCAAAGCTGGGGCTGAAATGCTTGTGATGGCTTATGGGAGGTCTTATGGTCTTCCTGTGATTACAACCCGAGGCAAC
AATGTGTATGGACCAAATCAGTTCCCTGAGAAGCTCATCCCAAAATTTATCCTTTTGGCCATGAAAGGCTTGCCCCTTCC
AATTCATGGTGATGGCTCTAATGTCAGGAGCTACCTGTACTGTGAGGAT----GTTGCTGAAGCTTTTGAGGTAGTTC--
------TTCACAAAGGAG---AGGTTGGACATGTGTATAATATTGGTACTGTGAAGGAGAGGAGGGTAATTGATGTGGCC
AGTGACATATGCAAGCTATTTGGCTTGGACACCGAAAAGGTCATCAGGTTTGTCGAGAATAGGCCCTTCAATGACCAGAG
GTACTTCCTGGATGATCAGAAACTGAAGAAGTTAGGATGGGCAGAGCGCACGACATGGGAAGAGGGTTTGAAGAAAACAA
TTGAATGGTACACCAGCAATCCTGATTACTGGGGAGATGTTGCCGGTGCATTGC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr4B_999
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------AGATGGCGACCTATGAGCCCAA
GAACATCCTCATAACTGGTGCTGCGGGTTTCATTGCATCTCATGTGGCGAACCGTCTAATTAGGAGCTATCCTCACTACA
AGATTGTCGTCCTCGACAAGATTGACTACTGCTCCAACCTGAAAAATCTCAACCCCTCCCGGCCATCGCCAAATTTCAAG
TTTGTCAAGGGCGACATCGCAAGTGCTGATCTGGTGAACTATCTTCTCATCACTGAGTCGATTGACACCATCATGCACTT
TGCTGCCCAGACTCATGTGGATAATTCGTTCGGCAATTCCTTTGAGTTTACAAAGAACAACATATATG--------GCAC
CCATGT-------TCTCCTTGAGGCGTGCAAGGTTACTGGCCAGATCAGAAGATTT----ATCCACGTCAGTACTGATGA
GGTGTATGGAGAAACTGATGAGGATGCTGTGGTTGGTAACCATGAGGCCTCACAGTTGCTTCCGACAAATCCATATTCAG
CTACCAAAGCTGGGGCTGAAATGCTTGTGATGGCTTATGGGAGGTCTTATGGTCTTCCTGTGATTACAACCCGAGGCAAC
AATGTGTATGGACCAAATCAGTTCCCTGAGAAGCTCATCCCAAAATTTATCCTTTTGGCCATGAAAGGCTTGCCCCTTCC
AATTCATGGTGATGGCTCTAATGTCAGGAGCTACCTGTACTGTGAGGAT----GTTGCTGAAGCTTTTGAGGTAGTTC--
------TTCACAAAGGAG---AGGTTGGACATGTGTATAATATTGGTACTGTGAAGGAGAGGAGGGTAATTGATGTGGCC
AGTGACATATGCAAGCTATTTGGCTTGGACACCGAAAAGGTCATCAGGTTTGTCGAGAACAGGCCCTTCAATGACCAGAG
GTACTTCCTGGATGATCAGAAACTGAAGAAGTTAGGATGGGCAGAGCGCACGACATGGGAAGAGGGTTTGAAGAAAACAA
TTGAATGGTACACCAGCAATCCTGATTACTGGGGAGATGTTGCCGGTGCATTGC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr1A_1133
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TCCAGCTTCAGAAACCTCGACCCCTCTCATAGATCCCCGAATTTCAAA
TTCTTCAGGGGTGACATTACTAGCGCCGACCTGATGAACCACCTCCTGGTCACCGAATCGATCGACACCGTCATGCACTT
CGCTGCCTAGATTCACGTCGACAACTCCTTCAGGAACCCCTTCGGGTTCACCAAGAACTATATATGTGTACGGCATGCAC
CCACGTACGTCGACCTCCTCGAGGCCTGCAAGCAGGTTA---AGATCACAAGGTTCATCCATCCATGTCAGCACCGATGA
AGTCTATGGAGAAACTGATGCGAATACTGTCATTGGTAACCACGAGGAATCCCAGCTGCTCCCCACAAAGTCGTACTCAG
CCACGAAAGCCGGCGCGGAGATGCTGGTGATGGC--ACGCAAGGTCCTACAATCTTCCGGTGATCACCACCCGAGGTAAC
AGTGTGTGTGGGCCTAACCAGTTCCCTGAGAAGCTTGTCCCCATATTCGTTCTCCTGGCAATGAGAGGCATGCCCCTTCC
GATTTACGGCGACGGCTCGAATCTCAGGAGCTACTTGCACTGTGAGGATCGATGTTGCTGAAGCATTTGATGTTGTTCAC
TTGTTCTTCACAGAGGAGATCAGGTTGGACATGTGTATAACATTGCGGCAGCGAAGGGGAGAGGAGTGGTGGACGTGGCC
AGAGACATATGTGGCATTCTTGGGGTGGACGCTGAGAAGGTCATCAGGTTCATGGAGGACAGACCGTTCAATGACCAGAG
GTACTTTTTGGACGGTGAGAAGATGAGGAGGCTGGG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
---S---------S-S----------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------SSSS----------------S---------------------S-----------
---------S--------S---------------------------------------------S---------------
------S---------------------------S------------------S----------S---------------
-S---------S--------------------------------------------------------------------
----------------------------------------SSSSSS------------------------------SSSS
SSSSSSSSSSSS-----------------------S---------------------------S----------------
---------------------------------------------------------------------S--S-------
-----------------------------------S----------------S-S-------------------------
-----------------------------------S----------------SSS-----------S-------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
-------------------------------------------------------S-----------------S------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------------------------------------------------------S--
---------------------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
-------S-------------------S---------------------------------S----------S-------
----------------------------------------------------S---------------------------
------------------------------------SS-------------------------S-------S--------
-----------------------------S--------------------------S-S---------------------
--S---------S---------S-----------------------------------S---------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS--------------------------S-------SS---------S------------
------------S--------S------SS-------SS-----------------------------------------
---------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_525
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTGGATGTTGGTAGCTGCCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCGTGCATCCATAGGCTGAT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGGATGTTGGTAGCTGCCAG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2537
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGCGCAATGCCTTTTTCCAT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
