>input_sequence_60445
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---------------------------------------------------------ATGGGTGACCTGATTCCGGGGCT
CCCGGAGGAGGTGGCGCGGGAATGCCTGCTCCGGGTGGGGTTCCGTCAGCTCCCAGCAGCGCGCCGCACCTCGCGGCAGT
GGAAGGCGGAGGTGGAATCGCCGCTCTACGGCCGCCTCCGCCGGGCCAACGGCCATGCCCGCCCGATCCTCGCCCTCGCC
CAGGCCCTTCCCCCGCTCGCCGCCTCGGGCCCGGCCCACAAGTACGCTGCGTCCGCCGCCCTCTCCAACTCCTACCGGCT
CGTGCTCCACGACCCGGCCGACGGAGGGTGGGCCACGCTGCCCCCGCTCCCAGGCGGCCGGGGGCTCCCGCTCTTCTGCC
AGCTCGCCGCCGTGGCTTGTGTCGAGAGGAGGAAGCCGGTGGTGGTGGGCGGGTGGGACCCTGAGACGTGGGCGCCGACG
GACACGGTGCACGTGTACGACTTCCTGGAGGGCGCGTGGCGGAGCGGCGCGCCGATGCCTGGGCCGCGTCGGTCGTTCTT
CGCGTGCGCGGCGGCCGGAGGAAGGGTGTTCGTCGCAGGCGGACACGACGAGGAGAAGAACGCGCTGCGGTCGGCGGTGG
CATACGACGCCGAGGCCGACGCGTGGGCGGCGCTGCCCGACATGGCGCTGGAGCGGGACGAGCCAAGAGGGATCTGCGTC
GGCGCCAGGTTCGTCGTGGTTGGCGGGTACCCGACGGAGGCGC----------CACCGGCACCGGCGAGGCATTCGACAC
AGACGCCTGGGCGTGGGATCCAGTGCTGGACAGGTTGGTCGACGAGGGGGCGTGCCCGAGGACGTGCTGCGCCGCGCCGT
CCGCAGCAGGCGCCATGTACATGCTACGTGGTGGCCACCTCGCGGTGCGGGACGGCGACAGCGTGTGGCGGGTGGTGGCG
CCGGTACCGGAGGACGGGCGCGCGGCGACGGTCGTCGTGGCCATCGGGGACGGCCGCGTGGCCGCCATCGGCGCCGGGCG
CCACGGCGGTGAGCAGGCCGTGTATGTGCTCAGCAAGGAGGCTGGAACCAACGGGGCGGCGCCGTCGTGGGCGCGCGTCC
TGGCGCCTCAGGAGTTCGCCGGGCACGTGCAAGCCGCGTGTTGCGTAGAAGTATGA------------------------
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>chr6D_1_TraesCS6D01G165600
ACCCGCCTAAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGTGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGCGAGCACTACCTTCAATCTGTAGGCGCTCCAGCGAAGACGCTCCGGTCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCGCCGTCGCCTTCTCCTCTCGCCTTCTCCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGATGGCAACCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGT--CACACCACACACACGCCTTGTCCTACGTGGCACACAAAATCAGTCAAAACGTGCCAAGAT
TCGTGCAGATACTGCTGGACGGCGATGGAGGCGTGTGGTTGAGATGGCGATAAATAGCCACGCTCTTCGTAGCCGGCCGG
TCGGATCCCGGCGACGGCGACCGGCGGCCTGGCACGAAACTGGGGACGGAGCAATTACAG-----TGTACTGCCGCACGC
CACCGGGCCGAGAGGGCGACGT--------CTCCATCCTGACCAA-TTTTTTGAAGGCAAGTTGTTTCCGGATATGATAC
GGGATCAGCATGGCGAGGCGAGCGCCGTTCGGAAAACC-TCTCTCGCATTCCCGCGCAACCCCCTTGGTTTGTACAATAA
ATTTAAAAAATGCTGCTTTGTCCGGTATAAAGCTCGCCATCCCGCCGCGTCCCAAAACAACTCAGCTCAGCCACGACCCC
CACAATTCACTGCTCGATTCTCGTTGCGTAGTAGGGTTCCAAACCAGAGAGCAAGAAGCGGATTGTTATCGGTTCTTTTC
GTTTGATTTGAAGGAGTGAGCGAATTAAGGTTGTGCATCGGTCGAGGTTGATCGACGATGGGTGACCTGATTCCGGGGCT
CCCGGAGGAGGTGGCGCGGGAATGCCTGCTCCGGGTGGGGTTCCGTCAGCTCCCAGCAGCGCGCCGCACCTCGCGGCAGT
GGAAGGCGGAGGTGGAATCGCCGCTCTACGGCCGCCTCCGCCGGGCCAACGGCCATGCCCGCCCGATCCTCGCCCTCGCC
CAGGCCCTTCCCCCGCTCGCCGCCTCGGGCCCGGCCCACAAGTACGCTGCGTCCGCCGCCCTCTCCAACTCCTACCGGCT
CGTGCTCCACGACCCGGCCGACGGAGGGTGGGCCACGCTGCCCCCGCTCCCAGGCGGCCGGGGGCTCCCGCTCTTCTGCC
AGCTCGCCGCCGTGGCTTGTGTCGAGAGGAGGAAGCCGGTGGTGGTGGGCGGGTGGGACCCTGAGACGTGGGCGCCGACG
GACACGGTGCACGTGTACGACTTCCTGGAGGGCGCGTGGCGGAGCGGCGCGCCGATGCCTGGGCCGCGTCGGTCGTTCTT
CGCGTGCGCGGCGGCCGGAGGAAGGGTGTTCGTCGCAGGCGGACACGACGAGGAGAAGAACGCGCTGCGGTCGGCGGTGG
CATACGACGCCGAGGCCGACGCGTGGGCGGCGCTGCCCGACATGGCGCTGGAGCGGGACGAGCCAAGAGGGATCTGCGTC
GGCGCCAGGTTCGTCGTGGTTGGCGGGTACCCGACGGAGGCGC----------CACCGGCACCGGCGAGGCATTCGACAC
AGACGCCTGGGCGTGGGATCCAGTGCTGGACAGGTTGGTCGACGAGGGGGCGTGCCCGAGGACGTGCTGCGCCGCGCCGT
CCGCAGCAGGCGCCATGTACATGCTACGTGGTGGCCACCTCGCGGTGCGGGACGGCGACAGCGTGTGGCGGGTGGTGGCG
CCGGTACCGGAGGACGGGCGCGCGGCGACGGTCGTCGTGGCCATCGGGGACGGCCGCGTGGCCGCCATCGGCGCCGGGCG
CCACGGCGGTGAGCAGGCCGTGTATGTGCTCAGCAAGGAGGCTGGAACCAACGGGGCGGCGCCGTCGTGGGCGCGCGTCC
TGGCGCCTCAGGAGTTCGCCGGGCACGTGCAAGCCGCGTGTTGCGTAGAAGTATGATACAGTAACAAAAAATCAGTATAT
GCACAGTTGTCAATTAAATCTGAAAGTTAGTGGCGTTTAGAAAACTACATACTAAAATTTAAACCATACAGGAAAAATCT
ACAAGACTGCAACATATACTTAGATGATACCCCACGCGTTGCCGTGGGATCGGTTGCAAAATATTAGACATGAATGTTTG
GATACATAATAATATACAAATTAAAAACTATAT-----------------------------------------------
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---------------------------------------------------ATATATATATATATATATATATATATATA
TATATAATTCATTGTATTTAGTTACTGAGGTGAACTTTTCCCACACATGTTTGCATGTTGAGTTGGATTTTTTCAAGGGA
AACGTTTACATTCGGAGCGCCGGCCGAACCGTTGCACCGGACAAGTGCACGCCTTGCGATCGCTCTCCATCGTGCGTCAC
GCAT----------CACTCTTCCTTCCAATCC-TTTTTCT--TTTTCATTATCTTCTTCTCCCCCCACGACGCGT---AG
CAACCACTCC-TTTTCCCCATCTCCGCCGCCACGCGCAGCGCGCCGGCGTGACGAGCCGTTTTGCTGCTACGGTGA----
GCCACGCCGAGGGCGAGAGAAGACATCGAGGGTGGAGAAGTTGCGAGGCAGGAGAGCTGCAAGAGGCCCGCACGCGGCGC
TAGTGCCCGTCAATGGTGCGCGACTAGCCATGGC--GCGACAGCGAGGTGATGCTTGAACCGTTTATACGAAAGCTTTCA
CCCTTCGATTCAAATGCTTCAACCAGCGGCATATAAAGCTTCAACTGAGACACCGTGCACTGGAAAAGCTACAATCGATC
ATAAGAAAGCTACAATCATTCATAAGAAA-GCTACAA-TCGTTCTGGAAAAAGATTTTC---------------------
GAGTGGGGCACTGCGCAAACCCGAAAGCTGCTACTGGCTACGAGAAAAGCTTCAACCGACGGCGAAAAAAGTTTCAACCG
TAGACGACGGAAGCCATGGACGACGACGAAA-GCTGCAACCGGCTTCGTTGTTTGCTACAACCGGCTTCTTTTTTGCTAC
A-
>chr7D_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGTATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGGTCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCGCAGTCGCCTTCTCCTCTCGCCTTCTCCTCCAATCGACTGAACTGCAGGGTGGGTTG
TGCGAGTAACTGAGGGGACGAGTAAATGGAACCGTGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGACGGCAACCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGTGACACACCACATACACGCCTTGTCCTACGTGGCACACAAAATCAGTCAAAACGTGCCAAGAT
TCGTGGAGATACTGCTGGACGGCGATGGAGGCATGTGGTTGAGATG----------------------------------
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>chr7D_1
ACCCGCCTGAATCTCGATAAATCTCGAGCGAAGCATCGACCACAGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
ATGGGAGGGAGAATTACCTTCAATCTGTAGGTGCTCCGACGAAGACGCTCCGGTCCGGCGAGTCCCACCGATGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCGCCGTCGCCTTCTCCTCTCGCCTTCTCCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGGG-CGAAGTGCGCGACATGTTTGACGGCAACCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCTGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGTCACACACCACACACACGCCTTGTCCTACGTGGCACAGAAAATCAGTCAAAACGTGCCAAGAT
TCGTGCAGATACTGCTGGACGGCGATGGAGGCGTGTGGTTGAGATG----------------------------------
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>chr1D_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGGTCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCACCGTCGCCTCCTCCTCTTGCCTTCTCCTCCAATCGACTGAACTGCAGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGATGGCAACCACG
GTCGGGCATCGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGAGAGGCAACCGG
CGTGTGGGCGAACTATGTCACACACCACACACATGCCTTGTCCTACGTGGCACACAAAATCAGTCAAAATGTGCCAAGAT
TCGTGCAGATACTGCTGGACGGCGATGGAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr1D_1
ACCCACCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGATAGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGGTCCGGTGAGTCCCACCGACGGCCGCGA
ATGTCGTCAACTCTTCCGCCTCCGTCGTCGCCTTCTCCTCTCGCCTTTTCCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGGGGCGAAGTGCACGACGTGTTTGACGGCAACCACG
GTCGGGCGTGGCATGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGTCACACACCACACACACGCCTTGTCCTACGTGGCACACAAAATCAGTCAAAACGTGCCAAGAT
TCGTGCAGATACTGCTGGACAGCGATGGAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr2D_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGGTCCAGCGAGTCCCACCGACGGCCGCGA
ATGTCGTCGACTCTCCCGCCTCCACCGTCACCTTCTCCTCTCGCCTTCTCCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAACTGGAACCGTGAGGG-AGGGGGGCGAAGTGCGCGACGTGTTTGACGGCAACCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGTAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CATGTGGGCGAACTATGT--CACACCACACACACGCCTTGTCCTACGTGGCACACAAAATCAGTCAAAACATGCCAAGAT
TCGTGCAGATACTGCTGGACGGCGATGAAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr2D_1
ACCCGCCTGAATCTCGATGGATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
ATGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGCTCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCAGCCGTCGCCTTCTCCTCTCTCCTTCTTCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCATGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGACGGCAACCACG
GTCGGGCGTGGTGTGCGGGCGCAGAGCAGTTTCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTAGGCGAACTGTGTCACACACCACACACACGTCTTGTCCTACGTGGCACACAAAATCAGTCAAAACGTGCCAAGAT
TCGTGCAGATACTGCTGGACGGTGATGAAGGCGTGTGGTTGAGATGGC--------------------------------
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--
>chr4D_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTCCGGTCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCGCTGTCGCCTTCTCCTCTCGCCTTCTTCTCCAACCGACTAAACTACGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGTGGCGAAGTGCGCGGCATGTTTGACGGCAGCCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGTCACACACCACACACACGCCTTGTCCTACGTGGCACACAGAATCATTCAAAACGTGCCAAGAT
TCGTACAGATACTGCTGGACGGCGATGGAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr3B_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAAGGGAGAAATGCAGGCAATGATTTTGAGT
GTGGGAGGAAGCATTACCTTCAATCTGTAGGCGCTCCGGCGAAGACGCTTCGATCCGGCGAGTCCCACCGACGGCCGCGA
ATGCCGTCGACTCTTCCGCCTCCGCCGTCGCCTTCTCCTCTCGCCTTCTCCTCCAATCGACTGAACTGCGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGAAACCGTGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGACGTCAACCACG
GTCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCATCGCACGCCCCCGAGTGGCAACCGCTGACCGCGGGGAGGCAACCGA
CGTATGGGCGAACTATGTCACACACCACACACGCGCCTTGTCCTACGTGGCACACAAAATCAGCCAAAACGTGCCAAGAT
TCGTGCAGAGACTGTTGGACGACGATGGAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr2B_1
ACCCGCCTGAATCTCGATGAATCTCGAGCGAAGCATCGACCACGGAGGGGAGGGGAGAAATGCAGGCAAGGATTTTGAGC
GTGGGAGGGAGCATTACCTTCAATCTGTAGGCGCTACGGCGAAGACGCTCCGGTCCGGTGAGCACCAGCGACGGCCGCGA
ATGCCGTCGACTCTTCTGCCTCCGCCATCGCCTTCTCCTCTCGCCTTCTCCTCCAATCGACTAAACTGTGGGGTGGGTTG
TGCGAGTAACTGAGGGGAGGAGTAAATGGAACCGTGAGGGGAGGGGGGCGAAGTGCGCGACGTGTTTGACGTCAACCACG
ATCGGGCGTGGCGTGCGGGCGCAGAGCAGTTCCACCGCACGCCCCCGAGTGGCAACCGCTGATCGCGGGGAGGCAACCGG
CGTGTGGGCGAACTATGTCACACACCACACACGCGCCTTGTCCTACGTGGCACACAAAATCAGCCAAAACGTGCCAAGAT
TCGTGCAGATACTGCTGGATGGCAATGGAGGCGTGTGGTTGAGATGGC--------------------------------
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>chr6B_528
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-------------------------------------------------ATAAATAGCCACGCTCTTCGTAGCCGGCCGG
TCGGATCCCGGCGACGGCGACCGGCGGCCTGGCACGAAACTGGGGACGGAGGAATTACAG-----TGTACTGCCGCACGC
CACCGGGCCGAGAAGGCGACGTCTCCATGACTCCATCCTGACCAA-TTTTTTGAAGGCAAGTTGTTTCCGGATATGATAC
GGGATCAGCATGGCGAGGCGAGCGCCGTTCGGAAAACC-TCTCTCGCATTCCCGCGCAACCCCCCTGGTTTGTACAATAA
ATTTAAAAAATGCTGCTTTGTCCGGTATAAAGCTCGCCATCCCGCCGCGTCCCCAAACAACTCAGCTCAGCCACAATC--
-------CACTGCTCGATTCTCGTTGCGTAGTAGGGTTCCAAACCAGAGAGCAAGAAGCGGATTGTTATCGGTTCTTTTC
GTTTCGTTTGAAGGAGTGAGCGAATTAAGGTTGTGCATCGGTCGAGGTTGATCGACGATGGGTGACCTGATTCCGGGGCT
CCCGGAGGAGGTGGCGCGGGAATGCCTGCTCCGGGTGGGGTTCCGTCAGCTCCCAGCAGCGCGCCGCACCTCGCGGCAGT
GGAAGGCGGAGGTGGAATCGCCGCTCTACGGCCGCCTCCGCCGGGCCAACGGCCATGCCCGCCCGATCCTCGCCCTCGCC
CAGGCCCTTCCCCCGCTCGCCGCCTCCGGCCCGGCCCACAAGTACGCTGCGTCCGCCGCCCTCTCCAACTCCTACCGGCT
CGTGCTCCACGACCCGGCCGACGGAGGGTGGGCCACGCTGCCCCTGCTCCCAGGCGGCCGGGGGCTCCCGCTCTTCTGCC
AGCTCGCCGCCGTGGCTTGTGGCGAGAGGAGGAAGCTGGTGGTGGTGGGCGGCTGGGACCCTGAGACGTGGGCGCCGACG
GACACGGTGCACGTGTACGACTTCCTGGAGGGCGCGTGGCGGAGCGGCGCGCCGATGCCTGGGCCGCGTCGGTCCTTCTT
CGCGTGCGCGGCGGCCGGAGGAAGGGTGTTCGTCGCTGGCGGACACGACGAGGAGAAGAACGCGCTGCGGTCGGCGGCGG
CATACGACGCCGAGGCCGACGCGTGGGCGGCGCTGCCCGACATGGCGCTGGAGCGGGACGAGCCAAGAGGGATCTGCGTC
GGCGCCAGGTTCGTCGTGGTTGGCGGGTACCCGACGGAGGCGCAGGGCCGGTTCACCGGCACCGGCGAGGCATTCGACAC
AGACGCCTGGACGTGGGATCCAGTGCTGGACAGGGTGGTCGACGAGGGGGCGTGCCCGAGGACGTGCTGCGCCGCGCCGT
CCGCAGCAGGCGCCATGTACATGCTACGTGGTGGCCACCTCGCGGTGCGGGACGGCGACAGCGTGTGGCGGGCGGTGGCG
CCGGTACCGGAGGACGGGCGCGCGGCGACGGTCGTCGTGGCCATCGGGGACGGCCGCGTGGCCGCCATCGGCGCCGGGCG
CCACGCCGGTGAGCAGGCCGTGTATGTGCTCAGCAAGGAGGCTGGAACCAACGGGGCGGCGCCGTCGTGGGCGCGCGCCC
TGGCGCCGCAGGAGTTCGCCGGGCACGTGCAAGCCGCGTGTTGCGTAGAAGTATGATACAGTAACAAAAAATCAGTATAT
GTACAGTTGTCAATTAAATCTGAAAGTTAGTGGCGTTTAGAAAACTACATACTAAAATTTAAACCATACAGGAAAAATCT
GCAAGACTGCAACATGTACTTAGATGATACACCACGCGTTGCCGTGGGATCGGTTGCAATATATTAGACATGAATGTTTG
GATAAATAATAATATACAAATTAAAAACTATATATATAGAGAGAGAGAGTATTACTATTCATCACCCAGGGTGCAGGATA
TGTTATTCTTCATCTGAGGTAATCTTACGATCATTTCATAAATAAATTATGTTTCAAATATAAATAGTTAAAGTCATATT
AATTCACTGCATAAAATTTGACATAAAAAAAGTCAAAAGACCAGAAAAATTACATTTTATGTACATTTTACACTATGTTT
TTACATTTGCAATTTACGTAACATAAAATATTTTTTACGATGATTATATATTTTCTTACGTTCTTTTTTTACATCTAAAA
TAAGACAAAATTTACAAAACGTAAAATTACGATGCATTGATGTTAAAATAGAGGGGGGTGAAGAATAATTCCTCACCCAG
GGTGACGAATAGCGCGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATAATTCACTGTATTTAGTTATTGAGGTGAACTTTTCCCACACATGTTTGCATGTTGAGTTGGATTTTTTCAAGGGA
AACGTTTACATCCGGAGCGCCGGCCGAACCATTGCGCCGGACAAGCGCACGCCTTGCGATCGCTCTCCATCGTGCGTCGC
GCAT----------CACTCCTCCTTCCAATCC-TTT---TTCTTTTCATTATCTTCTTCTCCCGGCACGACGCGT---AG
CAACCACTCCTTTTCCTCCATCTCCGCCGCCACGCGCAGTGCATCGGCGTGAGGAGCTGTTTTGCTGCCACGGCGTTGCT
GCCACGGCGAGGGCGAGAGAAGACATCGAGGGTGGAGAAGTTGCCAGGCAGGGGAGCTGCAAGAGGCCCGCATGCGGCGC
TAGTGCCCGTCAATGGTGCGCGACTAGCCATGGC--GTGACAGCGAGGTGATGTTGGAACTGTTTATACGAAAGCTTTCA
CCCTTCGATTCAAATGCTTCAACCAGCGGCATATAAAGCTTCAACCGAGACACTGTGCAATGGAAAAGCTATAATCGGTC
ATAAGAAAGCTGCAATCATTCATAAGAAAAGCTACAA-TCGTTCTCGAAGAAGATTTCAACTAGAAGACTGATTTTTTTT
GAGTGGGGCACTGCGC-AACCCGAAAGCTGCTACTGGCTACGAGAAAAGTTTTAACCGACGGTGAAAAAAGTTTCAACCG
TAGATGACGGAAGCCATGGACGACGACGAAA-GCTGCAACCGGCTCCGTTGTTTGCTACAACCGGCTTCTTTTTTTGCTA
CA
>chr6A_528
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-------------------------------------------------ATAAATAGCCACACTCTTCGTAGCCGGCCGG
TCGGATCCCGGCGACGGCGACCGGCGGCCTGGCACGAAACTGGGGACGGAGCAATTACATTGTACTGTAATGCCGCACGC
CACCGGGCCGAGAGGGCGACGT--------CTCCATCCTGACCAATTTTTTTGAAGGCAAGCTGTTTCCGCATATGATAC
GGGATCAGGATG-----GCGAGCGCCGCTCGAAAAACCGTCTCTCGCATTCCCGCGCAACCCCCCTGGTTTGTACAATAA
ATTTAAAAAATGCTGCTTTCTCCGGTATAAAGCGCGCCATCCCGCCGCGTCCCCAAACAGCTCAGCGCAGCCACAACCC-
-ACAACTCACTGCTTGATTCTCGTTGCGTAGTAGGGTTCCAAACCAGAGAGCAAGAAGCGGATTGTTATCGGTTCTT---
--TTCGTTTGAAGGAGTGAGTGAATTAAGGTTGTGCATCGGTTGAGGTTGATCGAAGATGGGTGACCTGATTCCGGGCCT
CCCGGAGGAGGTGGCGCGGGAATGCCTGCTCCGGGTGGGGTTCCGTCAGCTCCCAGCAGCGCGCCGCACCTCGCGGCAGT
GGAAGGCGGAGGTGGAGTCGCCGCTCTACGGCCGCCTCCGCCGGGCCAACGGCCATGCCCGCCCAATCCTCGCCCTCGCC
CAGGCCCTTCCCGCGCTCGCCGCCTCCGGCCCGGCCCGCAAGTACGCTGCGTCCGCCGCCCTCTCCAACTCCTACCGGCT
CGTGCTCCACGACCCGGCCGACGGAGGGTGGGCCACTCTGCCCCCGCTCCCAGGCGGCCGGGGGCTCCCGCTCTTCTGCC
AGCTCGCCGCCGTGGCCTGTGGCGAGAGGAGGAAGCTGGTGGTGGTGGGCGGCTGGGACCCTGAGACGTGGGCGCCGACG
GACACGGTGCACGTGTACGACTTCCTGGAGGGCGCGTGGCGGAGCGGCGCGCCGATGCCTGGGCCGCGTCGGTCGTTCTT
CGCATGCGCGGCGACCGGAAGAAGGGTGTTCGTCGCCGGCGGCCACGACGAGGAGAAGAACGCGCTGCGGTCGGCGGCGG
CATACGACGCCGAGGCCGACGCGTGGGCGGCGCTGCCCGACATGGCGCTGGAGCGGGACGAGCCAAGAGGGGTCCGCGTC
GGCGCCAGGTTCGTCGTGGTTGGCGGGTACCCGACGGAGGCGCAGGGCCGGTTCACCGGCACCGGCGAGGCATTCGACAC
AGACGCCTGGGCGTGGGATCCAGTGCTGGACAGGATAGTCAACGAGGGGGCGTGCCCGGGGACGTGCTGCGCCGCGCCGT
CCGCGGCAGGCGCCATGTACATGCTACGTGACGGCCACCTCGCGGTGCGGGACGGCGACAGCGGGTGGCGGGCGGTGGCG
CCGGTACCGGAGGACGGGCGCGCGGCGACGGTCATCGTGGCCATCGGGGACGGCCGCGTGGCCGCCATCGGCGCCGGGCG
CCACGGCGGTGAGCAGGCCGTGTATGTGCTCAACAAGGAGGCTGGAACCAACGGGGCGGCGCCGTCGTGGGCGCGCGCCC
GGGCGCCGCAGGAGTTCGCCGGGCACGTGCAAGCCGCGTGTTGCGTAGAAGTATGATACAGTAACAAAAAATCAGTATAT
GTACAGTTGTCAATTAAATCTGAATGTTAGTGGCGTTTAGAAAACAACGTACTAAAATTTAAACCATAC-GGAAAAATCT
ACAAGACTGCAACATGTACTTAGACGATACCCAACGCGTTGCCATGGGATCGGTTGCAATATATTAGACATGAATGTTTG
GATACATAATAATATACAAATTAAAAT-----------------------------------------------------
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------------------------------------------------------------------------TAAAAATA
TATATAATTCATTGTATATA------------------------------------------------------------
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>chr5A_2430
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--------------------------------------------------------------------------AAGGGA
AACGTTTACCTCCGGAGCGCCAGCCGAACCGTTGCGCCGGATGCGCGCGCGTCCTGCGATCGCTCTCGATCGTACGTCCC
GCAGGCCATGGGAGCACTTTTCCTTCGAATCG-TTTA-----TTTTCATTATCTTCTTCTCCCCCACGACATAGCTAGAG
CAACCGCTCCTTTCCCTTCATCTCCGGCGCTGCCCGCACAACTAGCCATGGCGCT----TTTTGCTGCTACGGCGA----
GCCACGGTGGGGGCGA-AGAAGACGGCGAGGATGGAGAAGTCGCGAGGCGGCGGAACTATAAGAGGGCCACGTGCGGCGC
TGGTGCCCGTCAATGGCGCACGACCAGCCATGGCGTGTGACAGCAGGGTGATGCTGGAACCGTTGATACGAAAGCTTCCA
CTATTCGATTCGAAAGCTTCAACCCGTGGCATAAAAAGCTTCAACCGAGACACCGCA-AATTGAAAAGCTACAATCGTTC
ATAAGAAAGCTGCAATCGTTCATAAGAAA-GCTACAA-TCGTTCTGGAAAAAGATTTCGACCAGGAGACTGATTTTTGGA
GGTGAGGCATTTGCGCAAACCCGAAAGCTGCAACCGGCTATGAGAAAAGCTTCAACCGACGGCGAAAAAAGTTTCAACCA
TAGACGACGGAAGCCATGGACGACGACGGAAAGCTACTACCGG-------------------------------------
--
>chr4A_2431
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---------------------------------------------------------------------------AGGGA
AACATTTACCTCCGGAGCGCCGGCCGAACCGTTGCGCCGGATGCGCGCGCGCCCTGCGATCGCTCTCGATCGTACGTCCC
ACAGGCCACGGGAGCACTCTTCCTCCGAATCC-TTT---T--TTTTCATTATCTTCTTCTCCCCCACGACATAGCTAGAG
CAACCACTCCTTTCCCTTCATCTCTGGCGC-GCGCGCACAACTAGCCATGGCGCT----TTTTGCTGCTACGGCGA----
GCCACGGTG-GGGCGA-AGAAGACGATGAGGATGGAGAAGTCGCGAGGCGGGGGAACTGCAAGAGGGCCACGTGCGGCGC
TGGTGCCCGTCAATGGCGCACGACCAGCCATGGCGTGTGACAGCAGGGTGATGCTGGAACCGTTCATACGAAAGCTTCCA
CTATTCGACTCGAAAGCTTCAACCCGTGGCATAAAAAGCTTCAACCGAGACACCGCA-AATTGAAAAGCTACAATCGTTC
ATAAGAAAGC-GCAATCGTTCATAAGAAA-GCTACAA-TCGTTGCGGAAAAAGATCTCGACCAGAAGACTGATTTTTGGA
GGTGAGGCATTTGCGCAAACCCGAAAGCTACAACCGGCTACGAGAAAAGCTTCAACCGACGGCGAAAAAAGTTTCAACCA
TAGACGACGGAAGCCATGGACGACGACGGAAAGCTACTACCGGC------------------------------------
--
>chr1A_2433
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-----------------------------------------------------------------------------GGA
AACGTTTACCTCCGGAGCGCCGGCCGAACCGTTGCGCCGGATGC--GCGCGCTTTGCGATCGCTCTCGATCGTACTTCCC
GCGGGCCACGGGAGCACTCTTCCTCCGAATCA--TT---T--TTTTCATTATCCTCTTCTCCGCCACGACATAGCTAGAG
CAACCGCTCCTTTCCCTTCATCTCCGGCGTTGCGCGCACAACCAGCCATGGCGCC----TTTTTCTGCTACGGCGA----
GCCACGGTGGGGGCAA-AGAAGACGACGAGGATGGAGAAGTTGCGAGGCGGGGGAACTGCAAGAGGGCCACGTGCGGCGC
TGGTGCTCGTCAATGGCGCACGACCAACCATGGCATGTGACAGTAGGGTGATGCTGGAACCGTTCATAAGAAAGCTTCCA
CTATTCGATTCGAAAGCTTCAACCCGTGGCATAAAAAGCTTCAACCGAGACACCGCA-AATTGAAAAGCTACAATCGTTC
ATAAGAAAGTTGCAATCGTTCATAAGAAA-GCTACAA-TCGTTCTGGAAAAAGATTTCGACCAAAAGACTGATTTTTGGA
GCTGAGGCATTTGCGCAAACCCGAAAGCTGCAACCGGCTACGAGAAAAGCTTCAACCGACGGTGAAAAAAGTTTCAACCA
TAGACGACGGGAGCCATGGACGACGACGGAAAGCTACTACCGGC------------------------------------
--
>chrUn_2520
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--------------CACTCCTCCTTCGAATCGTTTT---T--TTTTCATTATCTTCTTCTCCCCCACGAAATAGC--GAG
CAACCGCTCCTTTCCCTTAATCTCCGGCGCTGCGCGCACAACCAGCCATGGCGCT----TTTTGCTGCTACGGCAA----
GCCACGGCGGGGGCGA-AGGAGACGGCGAGGATGGAGAAGTCGCGAGGCGGGGGAGTTGCAAGAGGGCCACGCGCCGCGC
TGGTGCCTGTCAATGGCGCACGACCAGCCATGGCGTGTGACAGCAGGGTGATGGTGGAACCGTTCATACGAAAGCTTCCA
CTATTCGATTCGAAAGCTTCAACCCATGGCATAAAAAGCTTCAACCGAGACACCGCA-AATTGAAAAGCTACAATCGTTC
GTAAGAAAGCTGCAATCGTTCATAAGAAA-GCTACAAATCGTTCTGGAAAAAGAT-TCGACCAGAAGACAGATTTTTGGA
GGTGAGGCATTTGCGCAAATCCGAAAGCTTCAACCGGCTACGAGAAAAGCTTCAACCGACGGCGAAAAAAGTTTCAACTA
TAGACGACGGAAGCCATGGACAATGATGAAAAGCTACAACCGGCTCCATTGTTTGCTACAACTGGTTCCTTTTTTTGCTA
CA
>chrUn_2520
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--------------CACTCCTCCTTCGAATCGTTTT---T--TTTTCATTATCTTCTTCTCCCCCACGAAATAGC--GAG
CAACCGCTCCTTTCCCTTAATCTCCGGCGCTGCGCGCACAACCAGCCATGGCGCT----TTTTGCTGCTACGGCAA----
GCCACGGCGGGGGCGA-AGGAGACGGCGAGGATGGAGAAGTCGCGAGGCGGGGGAGTTGCAAGAGGGCCACGCGCCGCGC
TGGTGCCTGTCAATGGCGCACGACCAGCCATGGCGTGTGACAGCAGGGTGATGGTGGAACCGTTCATACGAAAGCTTCCA
CTATTCGATTCGAAAGCTTCAACCCATGGCATAAAAAGCTTCAACCGAGACACCGCA-AATTGAAAAGCTACAATCGTTC
GTAAGAAAGCTGCAATCGTTCATAAGAAA-GCTACAAATCGTTCTGGAAAAAGAT-TCGACCAGAAGACAGATTTTTGGA
GGTGAGGCATTTGCGCAAATCCGAAAGCTTCAACCGGCTACGAGAAAAGCTTCAACCGACGGCGAAAAAAGTTTCAACTA
TAGACGACGGAAGCCATGGACGATGATGAA--------------------------------------------------
--
>SNPs
--------S---------------------------------------S-------------------------------
-------S-----S-----------------------S------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
-----------------------------------------------------S--------------------S----S
S----S--------------------------------------------------------------------------
----SS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------S---------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------S----------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------S------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------S-------------------------------------------S--------------------
--------------------------------------------------------------------------------
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------------------------S-------------------------------------------------------
-----------S-----------------------S---------S--------------------------------S-
------------------------------------SSS-----------------------------------------
--------------S-S----------------------S--SS--------S----S---------------S------
------S---------------------------------------------S---------------------------
-------------------------------------S-----------------S------------------------
---------------------------------------------S-------------S-----------------S--
-----------S---------------------------------------------SS---------------------
--------------------------------------------------------------------------------
---------------------------------------------S-----------------------------SSSSS
S-
>forward_88
--------------------------------------------------------------------AGGATTTTGAGC
GTGGGAGC------------------------------------------------------------------------
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--
>reverse_1382
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---------------------TCGAGAGGAGGAAGCCGG-----------------------------------------
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--
>forward_875
--------------------------------------------------------------------------------
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-------------------------------------------------------AACAACTCAGCTCAGCCACG-----
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--
>reverse_3098
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---------------------------------------------------------CGTTTTGCTGCTACGGTGAG---
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--
