>input_sequence_60396
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----------------------------------------------------------------------------ATGA
GCGGCCTCATCAGCAGGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGGCGTCGGCGGCACACAT
AAGCGGCCGCGATGGCCCAGTGTGAGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAA
GATGGAGGCAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACGGGCAAGACCAAGCTGTCCATCG
ACGCGGCCCTAGAGCTCGGTGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGGGGCCTCGACGTCACCACCAAC
AAGGTGATGCCCGCCGACCGCCGCGGCGTCGCCCACCACCTCCTCGGCGCCGTCCGCGCCGATGCCGGCGAGCTCCCCGC
CTCGTCCTTCCGCTCGCTCGCCGCCGCCAAGGCGGCCGACATCGCGGCGCGCGGGCACGTGCCAGTGGTGGCCGGCGGGT
CCAACTCCCTCATCCACGCCTTCCTCGCCAAGCGATTT---GA------TGCCCACGCCCCTCGGGACCCTTTCGCCGCT
GCGGCAACCGGATACCGGCCGGCGCTCAGGTTCCCGTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGA
ATACCTCGATCGGCGTGTCGACGACATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGG
CCTCTGAACGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGCGTGCCGGAGATCGGGGACTACCTCGCCGGGCGT
AAAAGCCTCACCGCCGCAGTGGACGAGATCAAGGCGAACACTCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCG
CATGGCAGACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTGGCGCGGCTCGCGGGCGCCGGGC
GCGACGCCGAGGCCGCGGCGTGGCATCGCGACGTGCGCGGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAA
GGACTGTCCAGACACGACGACGCCGATGAAGAGGACGGAGTAGTCACACGGAGACAATGCCATGGCATGGTGGGGTAA--
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----------------
>chr3D_1_TraesCS3D01G263000
ACCGCGACCCATTGGCTGAGCAAGCTCCCGACAAAAGGTTTCGCCCCGACTGAGAGAGAGGCTCTACAACTCCGTGAAGC
TAG-----------GTCCTTGTCCCGGCGACATCAAGATCGGAGTATGAGGTCAATGACACCAATGTGCAAGGCCCCCTA
TGCCCCAGATGCGGCTACTATGGCGGCCCGTCTGAGGTCGAGGCACGGCGTGCTCGTTGTCAGAGTGCTCGTACACGCGG
TGCCACGGAGAAAGAAGTTGTAGCCAGATCTAGGAGAAGCGCCACGCCCGGGCGGTCCGTGCCCTCGAGGCGGACCATGG
TTGGGCTGTCAATGCCCCCGTAAGCCTTCCACAAAGGAGGACATCTACGGTGATGCTCCTATCCATCGAGCTCCGACGCC
GAGCAGATTAGCATTAATCCGTATTGCATCTCTCAGCGCTACTTCCGCGACAACGACGACAAATGAGTGAAGGACTAGGG
CGGCCATGGATGAATTTCCTCTATAATCCTATGAATTAGTAGAACACATGCCAAATTTTGATAGTCCGATGATATTATAT
GAACTATATCCTATGTCATGTATGAATTATATCCTTGCTCACAGCTCCCCTATGCTATGTCCTAATTTGATACTCCCTAC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----TCCTAAAATAAGTGTTTTAGTTTTAGTATAACTTTTTATTAAACTTAGTATTCAAGTTGAGACACTTTATTTTGAG
ATGGAGTGAATATATCTTATACGAACTATATGAACAAATGAGAAAGGGGGTGTGGGGGGGTCGTCCTGAACTATATATAT
ATATATGTGCGGGGCAGCCAACGA----------------------ACACTCGTAAGTCGCACAAATACAGATACCAGCC
GTGCAAGACTACAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATCTCCCA
ACCCGTGGCAATAAGCGAGTCCCCGCTGCTACTGTGGCGAGGTGACTGGTGGGGTGCGCGGGATTGAGCCGCCTATATGA
GCGGCCTCATCAGCAGGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGGCGTCGGCGGCACACAT
AAGCGGCCGCGATGGCCCAGTGTGAGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAA
GATGGAGGCAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACGGGCAAGACCAAGCTGTCCATCG
ACGCGGCCCTAGAGCTCGGTGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGGGGCCTCGACGTCACCACCAAC
AAGGTGATGCCCGCCGACCGCCGCGGCGTCGCCCACCACCTCCTCGGCGCCGTCCGCGCCGATGCCGGCGAGCTCCCCGC
CTCGTCCTTCCGCTCGCTCGCCGCCGCCAAGGCGGCCGACATCGCGGCGCGCGGGCACGTGCCAGTGGTGGCCGGCGGGT
CCAACTCCCTCATCCACGCCTTCCTCGCCAAGCGATTT---GA------TGCCCACGCCCCTCGGGACCCTTTCGCCGCT
GCGGCAACCGGATACCGGCCGGCGCTCAGGTTCCCGTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGA
ATACCTCGATCGGCGTGTCGACGACATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGG
CCTCTGAACGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGCGTGCCGGAGATCGGGGACTACCTCGCCGGGCGT
AAAAGCCTCACCGCCGCAGTGGACGAGATCAAGGCGAACACTCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCG
CATGGCAGACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTGGCGCGGCTCGCGGGCGCCGGGC
GCGACGCCGAGGCCGCGGCGTGGCATCGCGACGTGCGCGGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAA
GGACTGTCCAGACACGACGACGCCGATGAAGAGGACGGAGTAGTCACACGGAGACAATGCCATGGCATGGTGGGGTAAGA
AGAACAGGAAAAGGCTTCGGGTTCGGGCGCGACACCGAGGGCGCGGCGTGGGATCGCGACGGGCCTCGCCTCCATGCGGC
CGTTCATGGCAGGCAAGGACTGTCCGGACACAAGGACGACGCCGATGACGAGGACGGGTCAGTCGCCCGGAGACAATGCC
GTGGCATGGTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATACGCCGCCGATTT
TGGAGGGCCCGGCGGCTGACCGGACACGGGCAGGTGGGGGCCATGGTGGTGCCACGGCGAACGGCACGACGATAGAACAC
GGAGACAAGACAAGAGAAGTGTCAAGTTTTGCA-GGGGGGCTGTGAATTCTCTCTCTCCCTCTCCCTCTCCCTTCCTGGA
TCGAGAGGCTCTTC----------------TTCTTCAGAATCTGCTCTGCT-AGCTAGCCACACCACACAACACCACTGT
ATAATACTCCAGTGTAATCTAGTCCAGCATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAGCTGCTCATCTTGAACA
GTGTT---GAGGACCGTGGGGTTTTTGTTGGGGCTAGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCAGAGATTG
GCGTCTCTCAAGTCTGGACAAGCGCCTTTTTTGACCTGGCTTTGCGTCTTGCATGTTATATGCCGGTTGATCATTTGGGT
CCAGATTTTACTTCACCCTACCATGTTAATGTT-GGTCGTTTCTAGTTGATTCATTCATTCTTCTTCTTTTCTA-TAATA
CAAAATAAATAAGTGCGGATCGCTT-------------------------------------------------------
------------------------------------------------------------GTACTGGTTTGAAAATATTC
CTGAGGGTGCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACG
CGTGAGTTGGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTATT
CATTTTACTATTTTTC
>chr3A_1
ACCGCGACCCATCGGCTGAGCAAGCTCCCGACAAAAGGTTTCACCCCGACTAAGAGAGAGGCTCTGCAGCTCCCCGAAGC
TAGGTCCTTGTCCCGTCCTTGTCCCGGCGACGTCAAGCTCGGAGTATGAGGTCAATGACGCCAATGTGCAAGGCCTCGTA
TGCCCCAGATGCGGCCACTATGGCGGACCGTCAGAGGTCGAGGCACGGCGTGCTCATTGTGAGAGTGCTTGTACACGCGG
TGCCACGGAGAAAGAAGTTGTAGCCGGATCTGGGACAAGCGCCACGCCCGGGCGGTCCATTCCCTCAAGGCGGACCATGG
TTGGGCCGTCAGTGCCCCGCCAAGCCTTCCACAAAGGAGGACATCTACGGTGAGGCTCCGATCCATCAAGCTCTAGCGCT
GAGCAGATTAGCATTGATCTGTATTGCATCTCTCAGGGCTACTTCCGCGACAACGACGATAAAGGAGGGAAGGACAAGGG
CGGCGGTGGATGAATTTCCTCTATAATCCTATGAATTAGTAGAACACATACCGAATTTTGGTAGTCCGATGATATTATAT
GAACTATATCCTACGTCATGTATGAACTATATCCTTGCTCACAACTCCCCTATGCTATGCTCCTAGTTTTTTTTTACGGG
AATAACTTCCGATCTATTTATCAACTGTCAAGGTAGTACAAAGAACACCAGAAGTAAAAAACACATCTATGTCCGTAGAC
CACCTAACGACGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCTTTGCCCCTTCCTCATCGAAGCCGGGCAA
ACCTTGTTGCAGTAGACAGTCGGGAAGTCGTCGTGCTAAGACCCCATAGGACCAGCGCACCAGAACAGCATCCGCCGCCG
ATGAAGAGAAGCGTAGATCAGAAGGATCCAATTTGTAGACACATGAACACGGACGAACGAAGACAAGATCCACATGGATC
CACCGAAGACAAACGCCGACCGAATCCTGTGAGATCCGTCGGAGACAAACCTCCACACGCCCTCCAACAATGCTAGAAAC
ACCATCGAAACGGGGACAAGGCGGGAAGAACCTTATTCATCAGCAAAGAGCCGCTGCCTCGCCTCGCCTCTCTGAGGAGG
ACACAAACCCTCAATGAACAAACGACCCTTTGGGAACTGGTGCGGGTTTTCCTGCTTGCGTTGCAGGCAGCTCACATGTT
CCCGTCCCAAAATAGGTGTTGCAATTTTAGTACAACTTTGGACTAACATTAGTATTAAATTTGATACACTATATATATG-
--------------------------------------------------------------------------------
------------------------TTATCCCCATGAACTGGCAATGACACT-GTAAGTGGCACAAATACAGATACCAGCC
GTGCAAGACTGCAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATTTCCCA
ACCCGTGGCAATAAGCGAGTCCCCGCTGCTACTGCGACGAGGTGACTGGTGGGGTGCGCGGGATTGAGTCGCCTATATGA
GCCGCCTCATCAGCACGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGCCGGCGGCGGCACACAT
AAGCGCCCGCGATGGCCCAGTGTGCGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAA
GACGGAGGCAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACCGGCAAGACCAAGCTGTCCATCG
ACGCGGCCCTAGAGCTCGATGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGCGGCCTCGACGTCACCACCAAC
AAGGTGATGCCCGCCGACCGCCGCGGCGTCGTCCACCACCTCCTCGGCGCCATCCGCGCCAACACCGGCGAGCTGCCCGC
CTCCTCGTTCCGCTCGCTCGCCGCCGCCACGGCGGCCGACATCGCGGCCCGCGGGCGCGTGCCAGTGGTGGCCGGCGGGT
CCAACTCCCTCATCCACGCCTTCCTCGCCGAGCGATTT---GA------CGACCACGCCCCTCGGGACCCATTCGCCGCT
GCGGCGACCGGATACCGGCCGGCGCTCAGGTTCCCCTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGA
ATACCTCGATCGGCGCGTCGACGATATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGG
CCTCCGAGCGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGAGTACCGGAGATCGGAGACTACTTCGCCGGGCGC
AAGAGCCTCGCCGCCGCAGTAGACGAGATCAAGGCGAACACGCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCG
CATGGCAGACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTTGCGCGGCTCGCGGGCGCCGGGC
GCGACGCCGAGGCCGCGGCGTGGCATCGCGACGTGCGCCGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAA
GGACTGTCCAGAGACGACGACGCCGACGAAGAGGACGGAGTAGTGACACGGAGACAATGCCATGGCATGGTGGGGTAAGA
AGAACAGGAAAAGGCTTCGGGTTCGGGCGCGATGCCGAGGCCGCGGCATGGGATCGCGACGGGCCTCGCCTCCATGCGGC
CGTTCATGGCAGGCAAGGACTGTCCGGACACAAGGACGACGCCGATGACGAGGACGGGTCAGTCGCCCGGAGACAATGCC
GTGGCATGGTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATCCGCCGCCGATTT
TGGAGGGCCCGGCGGCTGACCGGACA-GGGCCGGTGGGGGCCATAGCGGTGCCACGGCGAACGGCGCGACGACAGAACAC
GGAGACAAGACAAGAGAAGTGTCAAGTTTTGCA-GGGGGGCTGTGAATTCTCTCTCCCCCCCTCC--CTCCCTCCCTGGA
TCGAGAGGCTCTTCTCCTTCCTCTTCTTCGTTCTTCAGAATCTGCTCTGCTTAGCTAGCGACACCACACCACACCACTGT
ACAATACTACAGTGCAATCTAGTCCGCTATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAGCTGCCTATCTTGAACA
GTGTTGTTGAGGAGCGTGTGGTTTTTGTTGGGGCTGGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCACAGATTG
GCGTCTCTAGAGTCTGGACAAGTGCCTTTTTTGACCTGGCTTTGCATCTTGCATGTTATGTGCCGATTGATCATTTGGAG
CCAGATTTTACTTCACCCTACCATGTTA-TGTT-GGTCGTTTCTGGTTGATTCATTC-CTCTTCTTTTTTCTATGTAATA
AACAATAAATAAGCGTGGATCGCTTGTT----------------------------------------------------
---------------------------------------------------------------CTGGTTTGAAAATATTC
CTGAGGGTGCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACG
CGTGAGTTGGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTTTT
CATTTTACTATTTT--
>chr3B_6
-----GACCCATCGGCTGAGCAAGCTCCCAACAAAAGGTTTTACCCCGACTGAGAGAGAGGCTCTGCAACTCCCCGAAGC
TTAGGTG----------CTTGTCCCAGCGACGTCAAGCTCTGAATATGAGGTCAATGATGCCAATG-GCAAGGCCCCGTA
TGCCCCAGATGCGGCCACCATGGCGGATCGTCTGAGGTCGAGGCACGACGTGCTTGTTGTGAGAGTGCTCGTACACGCGA
TGCCACGAAGAAAGAAGTTGTAGCCGGATCTAGGAGAGGCACCACGCCCGGGCAGTCTGTGCCCTCGAGGCGGACCATGG
TTGGGCTGTCAGTGGCCCCACAAGCCTTCCACAAAGGAGGACATCTACGATGATGCTCCGATCCATCAAGCTCCGGCGCC
GAGCAAATTAGCATTGATCTGTATTGCATCTCTCAGCACTACTTCCGCGACAATGACGACAAAGGAGGGAAGGACAAGGG
CGGACGTGGATGAATTTCCTCTATAATCGTACGAATTAGTAGAACACATGCCAAATTTTGGTAGTCGTC-----------
--------------------TATGAACTATATCCTTGCTCACAACTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------
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-----TGTGCGGGGCAGCCAACGATTATCCCAATGAACTGGCAATGACACTCGTAAGTCGCACAAATACAGATACCAGCC
GTGCAAGACTACAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATCTCCCA
ACCCGTGGCAATAAGCGAGTCCCCGCTGCTACTGTGGCGAGGTGACTGGTGGGGTGCGCGGGATTGAGCCGCCTATATGA
GCGGCCTCATCAGCAGGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGGCGTCGGCGGCACACAT
AAGCGGCCGCGATGGGCCAGTGTGAGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAA
GATGGAGGCAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACGGGCAAGACCAAGCTGTCCATCG
ACGCGGCCCTAGAGCTCGGTGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGGGGCCTCGACGTCACCACCAAC
AAGGTGATGCCCGCCGACCGCCGCGGCGTCGCCCACCACCTCCTCGGCGCCGTCCGCGCCGATGCCGGCGAGCTCCCCGC
CTCGTCCTTCCGCTCGCTCGCCGCCGCCAAGGCGGCCGACATCGCGGCGCGCGGGCGCGTGCCAGTGGTGGCCGGCGGGT
CCAACTCCCTCATCCACGCCTTCCTCACCAAGCGATTT---GA------TGTCCACGCCCCTCGGGACCCTTTCGCCGCT
GCGGCGACTGGATACCGGCCGGCGCTCAGGTTCCCGTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGA
ATACCTCGATCGGCGTGTCGACGACATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGTCAGTACTTCGCGACAACGTCGG
CGTCCGAGCGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGCGTGCCGGAGATCGGGGACTACCTCGCCGGGCGC
AAGAGCCTCGCAGCCGCAGTAGACGAGATCAAGGCGAACACGCGGGTGCTCGCGGCAGCGCAGGTCGGCAAGATCCGGCG
CATGGCAGACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCAGCGGCACCGTCCTCGCGCGGCTCGCGGGCGCCGGGC
GCGACGCCGAGGCCGCGGCCTGGCATCGTGACGTGCGCGGGCCGGGCCTCGCCGCGATGCGGCAGTTCCTGCGCAACCAA
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-------------------------GGACACAAGGACGACGCCGATGACGAGGACGGCTT---------GAGACAATGCC
GTGGCATGGTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATAGGCTGCCGATTT
TGGAGGGCCCGGCGGCTGAT-----------CGGTGGGGGCCATAGTGGTGCCACGGCGAACGGCACGACGATAGAACAC
GGAGACAAGACAAGAGAACAGTCAAGTTTTGCAGGGGGGGCTGTGAATTCTCTCTCTCCCTCC------CCCTCCCTGGA
TGGAGAGGCTCTTCT------TCTTCTTCTTTCTTCAGAATCTGCTCTGCT-AGCTAGCCACACCACAACACTGTACA--
ATAATACTACAGTGTAATCTACTCCGCCATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAACTCCTCATCTTGAACA
GTGTT---GAGGACCGTGGGGTTTTTGTTGGGGCTAGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCAGAGATTG
GCGTCTCTCAAGTCTGGACAAGCGCCTTTTTTGACCTGGCTTTGCGTCTTGCATGTTATATGCCGGTTGATAATTAGGGG
CCAGATTTTACTTCACCCTACCATGTTA-TGTTTGGTCGTTTCTAGTTGATTCATTC-TTCTTCTTCTTTTCTA-TAATA
AAAAATAAATAAGCGTGGATCGCTTGTACTTCCTCCGTCCGAAAATACTTGTCGGAGAATTGCATAAAAATGGATGTATC
TACAACTAAAATATGTCTAGATACATTTATTCCTCTGACAAGTATTTTCGGACGGAGGGAGTACTGGTTTGAAAATATTC
CTGAGGGTGCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACG
CGTGAGTTGGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTTTT
CATTTTACTA------
>chr1A_1187
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----------------------ACGCGGCTGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCG
ACGCGGCGCGGGAGCTGCGCGGCGAGGTCGTCAACGCCGACAAGATCCAGCTCTACAAAGGCCTCGACGTCACCACCAAC
AAGGTGCCGCTCGCCGACCGCCGCGGCGTCGAGCACCACCTGCTCGGCGCCGTCCCCCCCGAGGCCGGCGCGCTCCCGCC
GTCCTCCTTCCGCTCCCTCGGCGCCGCCAAGGTCGCCTCGATCGCGGCCAGGGGGCTGCTGCCCGTCGTAGCCGGCGGGT
CCAACTCCCTCATCCACGCCCTCCTCGCCGACCTCCCCGATGACGACGGCGCCGCGCTCCCCGAGGACCCCTTCTCCCTC
GACCGCTGC---TACCGCCCCGCGCTCCGGTACCCGTGCTGCCTCCTCTGGGTGGACGTGGAGGAGGCGCTCCTCGCCGA
GTACCTGGACCGGCGCGTGGACGACATGGTGGGCGCCGGCATGGTGGAGGAGCTGCGGGACTACTTCGCCGCCACCACCG
CCGCGGAGCGCGCCGCGCACGCCCCCGGGCTGGGCAAGGCCATCGGGGTGCCGGAGCTGGGCGAGTACCTCGCCGGGCGC
AGGAGCTTCCGCGCGGCCGTGGACGACATCAAGGCCAACACCCGGCGCCTCGCCGCCGCGCAGGTGTGCAAGATCCGGCG
CATGGCCGACGGCTGGGGCTGGCCCGTGCGCCGCCTCGACGCCTCCGCCACCATCCGCGCGCGGCTCGCCGGGGCCGGCC
CGGCCGCCGAGTCGGCGTCCTGGGAGCGCGACGTCCGCGGCCCCGGCCTCGCCGCCATCCGCGCCTTCCTCGCCGACCAA
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>chr1B_1191
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--------------------------GGCTGGTGGTGATCGTCGGCGCCACCGGCACCGGGAAGACCAAGCTGTCCATCG
ACGCCGCGCGGGCGCTGGGCGGCGAGGTCGTCAACGCCGACAAGATCCAGCTCTACCAAGGCCTCGACGTCACCACCAAC
AAGGTGCCCCTCGCCGACCGCCGCGGCGTCGCGCACCACCTGCTCGGCGCCGTCCCCCCCGACGCCGGCGCGCTCCCGCC
GTCCTCCTTCCGCGCCCTCGCAGACGCCAAGGCCGCCTCGATCGCGGCCAGGGGGATGCTGACCGTCGTCGCCGGCGGGT
CCAACTCCCTCATCCACGCCCTCCTCGCCGACCTCCCCGACGA------CGCCGCGCTCCCCGAGGACCCCTTCTCCCTC
GACCGCTCC---TACCGCCCCGCGCTCCGGTACCCCTGCTGCCTCCTCTGGGTGGACGTGGAGGAGGCGCTCCTCGCCGA
GTACCTGGACCGGCGCGTGGACGACATGGTGGGCGCCGGCATGGTGGAGGAGCTCCGGGAGTACTTCGCCGCCACCACCC
CCGCGGAGCGCGCGGCCCACGCCCCCGGGCTGGGCAAGGCCATCGGGGTGCCGGAGCTGGGCGAGTACCTCGCCGGGCGC
AGGAGCTTCCGCGCCGCTGTCGACGACATCAAGGCCAACACCCGGCGCCTGGCCGCCGCGCAGGTGGGCAAGATCCGGCG
CATGGCCGACGGCTGGGGCTGGCCCGTGCGCCGCCTCGACGCCTCCGCCACCATCCGCGCGCGGCTCGACGGCGCCGGCC
CGGCCGCCGAGTCGGCGTCCTGGGAGCGCGACGTCCGCGGCCCCGGCCTCGCCGCCATCCGCGCCTTCCTCGC-------
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>SNPs
------------S-----------------------------S----------------------S-------SS-----
-------------------------------S-----S---------------------S-----------------S--
---------------S----------S---------------------------------S-------------------
-------------------------S------------------------------------------------------
-----------S-------SS--------------------------------------S-------S-------S----
---------------S---S-------------------------------------------S---S-------S----
-----S------------------------------------------------------S-------------------
-------------S------------S----------------S---------------SS-SS-S--SS-SS-SS-SSS
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-------S------S-----SS-S--------S------SS-S---SS--------S--S----S-----S---S-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--S-----------------------------------------------------------------------S
--S------S-------------------------------S--------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------S-------------S-----------------S-----------------------------------
--------------------------------SS------S------S--------------------------------
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--------------------------S----S------------S-----------------------------------
-----------------------------------------------------------------SS------S------
---------------------------------------------------------------------S----------
--------S----------------SS-----------------------------------------------------
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-------------------------------------------------------------------------------S
----------------------------S----------------------------S----------------------
S------------S-S----------------------------------------------------------------
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-----------------------------------------------------------------------------S--
--------------SS
>forward_43
-----------------------GCTCCCGACAAAAGGTTTCG-------------------------------------
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>reverse_2400
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-------------------------------------------------------------------------------T
AAAAGCCTCACCGCCGC---------------------------------------------------------------
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>forward_1336
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------------------------------------AATGAGAAAGGGGGTGTGGG------------------------
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>reverse_3114
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-------------------------------------------------------------------------TCCTGGA
TCGAGAGGCTCTT-------------------------------------------------------------------
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