>input_sequence_60394
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---------------------------------------------------------------------ATGGCGTCTGC
AGGCAACGTGTTCGACCATGGAAGGCACGGCACCAGCCTTGCCAAAGTCGAGCAGGCCACGAGGTGCTGTGCGACCAGTC
CCGTCGACGC---GCAGTCTCCTCCGAAGCCGCTGCTGGTAGCCGCCCCGTGCGACGCAGGGGAGTACCCGGTGGTGCTG
TTCTTGCACGGCTACCTCTGCAACAACTACTTCTACTCCCAGCTGCTCCACCATGTGGCCTCCCATGGCTTCATCGTCAT
CGCTCCTCAGGTATAT----------------TCATCAAGCTAATATCGGCGTGGCAATGATCTTCTTCTTCTCAACAGA
TGAACACTGAACTCGAGTACGTACAATTGTAGCTGTACACGGTATCCGGACCCGACACCACCGGCGAGATAAACTCGGCG
GCCGCCGTCATCGACTGGCTCGCCGCCGGCCTCTCTTCCAAGCTCCCACCTGGTGTTCGACCGAACCTAACTGCGGTCAG
TT-ACCATCGA------TTGCTCTGCTCTCTAATTTAACAGAACAATTATTCGAGCTCGAGGTACTAAAAACAATTGCAT
CATCA---ATCAGGTGTCCATCTCCGGCCACAGCCGCGGCGGCAAGGTGGCCTTCGCGCTCGCGCTGGGCCACGCCAAGA
CCTCCCTGCCTCTGGCGGCCCTCATCGCCGTCGACCCCGTGGACGGCACCGGCATGGGCAACCAGACGCCCCCGCCAATC
CTAGCCTACAAGCCGAACGCGCTGCGCGTCCCGGCGCCGGTCATGGTCATCGGCACAGGCCTCGGCGAGCTGCCTCGCAA
CGCCCTGTTCCCGCCGTGCGCGCCTCTGGGCGTGAGCCACGCGGAATTCTACGATGAGTGCGCGGCGCCGGCGTGCCACC
TCGTGGCGAGGGACTACGGGCACACTGACATGATGGACGACGTGACGACGGGCGCCAAGGGGCTGGCCACGCGCGCCCTG
TGCAAGAGCGGCGGGGCCAGGGCGCCCATGAGGCGGTTCGTCGCCGGCGCCATGGTGGCGTTCCTCAAGAAGTGGGTACA
GGGGAAGCCTGAGTGGTTGGATGCCATTAGGGAGCAAACTGTGGTCGCGCCTGTGGTGCTGTCCGTGGTGGAGTTCCGTG
ATGAGTAG------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G103900
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGATCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCAGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTTTCAATTACGATGGCTCCACGACTAAGTCCTAACCCAAGGACATCTGCCGTGACA
ATTCCACGACAGGGCCCAACCTTACAACACTAATGAAGGAGTTGAGGGATAAAATGTGAGAATTATCTTGTCCGTGCAGC
TGCACG----GATTGGCGACTAGTAAGACTAATCGAAGATGGAAACAAAGGAATGTCCCAATCGTCCATCCTATAAG---
------------TACAAGAGAATGTGAAAAGAAGACT---AATGC------ATCAGATATTTCTGCGAGAACTACGAAGA
TAAGGAA-CCCGGAACACACGGCCGTTAAGCGACCACACGCACCCGTAACAACCACAACTCACGTTATATACTTTTTGTA
TATGACTTCCTCTGCAAGGCGCGTGGTATCAGCATAGTACTCTACTAGCCTGTCGCTCTACTTCACACCATGGCGTCTGC
AGGCAACGTGTTCGACCATGGAAGGCACGGCACCAGCCTTGCCAAAGTCGAGCAGGCCACGAGGTGCTGTGCGACCAGTC
CCGTCGACGC---GCAGTCTCCTCCGAAGCCGCTGCTGGTAGCCGCCCCGTGCGACGCAGGGGAGTACCCGGTGGTGCTG
TTCTTGCACGGCTACCTCTGCAACAACTACTTCTACTCCCAGCTGCTCCACCATGTGGCCTCCCATGGCTTCATCGTCAT
CGCTCCTCAGGTATAT----------------TCATCAAGCTAATATCGGCGTGGCAATGATCTTCTTCTTCTCAACAGA
TGAACACTGAACTCGAGTACGTACAATTGTAGCTGTACACGGTATCCGGACCCGACACCACCGGCGAGATAAACTCGGCG
GCCGCCGTCATCGACTGGCTCGCCGCCGGCCTCTCTTCCAAGCTCCCACCTGGTGTTCGACCGAACCTAACTGCGGTCAG
TT-ACCATCGA------TTGCTCTGCTCTCTAATTTAACAGAACAATTATTCGAGCTCGAGGTACTAAAAACAATTGCAT
CATCA---ATCAGGTGTCCATCTCCGGCCACAGCCGCGGCGGCAAGGTGGCCTTCGCGCTCGCGCTGGGCCACGCCAAGA
CCTCCCTGCCTCTGGCGGCCCTCATCGCCGTCGACCCCGTGGACGGCACCGGCATGGGCAACCAGACGCCCCCGCCAATC
CTAGCCTACAAGCCGAACGCGCTGCGCGTCCCGGCGCCGGTCATGGTCATCGGCACAGGCCTCGGCGAGCTGCCTCGCAA
CGCCCTGTTCCCGCCGTGCGCGCCTCTGGGCGTGAGCCACGCGGAATTCTACGATGAGTGCGCGGCGCCGGCGTGCCACC
TCGTGGCGAGGGACTACGGGCACACTGACATGATGGACGACGTGACGACGGGCGCCAAGGGGCTGGCCACGCGCGCCCTG
TGCAAGAGCGGCGGGGCCAGGGCGCCCATGAGGCGGTTCGTCGCCGGCGCCATGGTGGCGTTCCTCAAGAAGTGGGTACA
GGGGAAGCCTGAGTGGTTGGATGCCATTAGGGAGCAAACTGTGGTCGCGCCTGTGGTGCTGTCCGTGGTGGAGTTCCGTG
ATGAGTAGCCAGGATAG-GATGCCTTGTCAGTTGTCATTAGAGTTT-AATCGATAGCGGTGACTCATACTCCGTATGTTC
ATAGGAGTACATCAGAGCATGTAAAGTGTTTACTGAAACTGACAATTTACAACTTGATTTGCCAGTCTCTTGTAATTGCC
GTATATACATATTGTTTAGCACTCCTCCTCAATCACAACTATCTATGTTAAGCACATATGGGTGAGTGTATGTGCATTCA
TAAGGATGAGTGTACGTGCATATGTATGAGCATCTGCATCTGTACTGTGTTAAAATATATCTAAGTTAAGACTGCGCTGA
AAAGCCTCTATACGGCGCACTGGTTTTGTAAATCCATCTACTACTTAAAGCTTATTGGCCACCCATTCTCAAACAAAGTG
GTAGTCAATTTCAATATGGTTTGTGGCTTTGTCACCAAGATTAGCAGATAGGTATGTTGCATCAATATTGTCACAACATA
AAAAAAAAGACTGCTTTTGGATGATCACACCCAACTCTGTTAGCAAATTTTGGACCCAAATAATTTTAGTAGTAGCATTG
GCTAGAGCCTTATACTCGACTTCTGTGCTTGATCAAGATCCAGTAGTTTGCTTACAAGCACTCCAAGAAATCAAATCGAG
ATCCAGAAGATTTTTTGGAAAAGTGAATTTTTGAAATTGTTATTATTTTTTAAGATATCAACATTTTTTGTAAAATTCAA
ATATGTTTGGAAATATTTAAAATAATTGTAAAGAGATTTCAAACATTATTAAAAAACGCAAAAAATTTCTGAAAAAGTGA
AAAAATATGAAATTTATAACCTTATATAAAAGTTTTGCAAAAAATTCTAAAGCAACTTTCAAAACTTTGAATTTTTTTAA
AATTGTGAATTCATGAAAACTGAAAATGAAAAAAAGTAACCAAAAAATAAAATAAAAGAAACCAGAAAACCAGTAAAAGA
AACCAACAGAAAAGTGGTTCAAGAACCTTCTAGAAGATTTCCGAAACCTT
>chr3D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
TACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACAG--------------------------------------------------------------------
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>chr6D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACAG--------------------------------------------------------------------
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>chr6D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACCCTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACAG--------------------------------------------------------------------
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--------------------------------------------------
>chr2D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACA---------------------------------------------------------------------
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--------------------------------------------------
>chr2D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAAACCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGA-----------------------------------------------------------------------
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>chr5D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGCCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACAG--------------------------------------------------------------------
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>chr4D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGTCGGACACTCTTATGAGCCGGCCGGGACTCTAAAGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACAG--------------------------------------------------------------------
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>chr7D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGCTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCGGATCGAGAGCCGGGCATAGCTGTTTATCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTGGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACA---------------------------------------------------------------------
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>chr1D_1
TCACGGCGGATTATCCGGAGTCCGGAGAATGACGTCACTCCGGGTTATGGCCTTCACACGAACGGTAAGCCGGAGATTTT
TCTGTCGGCAGAGTTGAAGATTGACACGAGCCGGCTCAAGTCAATCTGGGGCCTAATGTTGAGGATATAGACCTGGGAGT
CACCCGCCAGGAGGGCCGGGTTACACTAAGGGTCATTGCCAGAAGCCCGGAGTTAAGTTTCAAGATAATGGGCCAGAGAT
GGGCTGAGACCCGGCGATGGCTTATTGCCCATAGTTATCATCATTGTTATAGTAGACTTGTAGTGTAAGGCAAGTATTGT
TTAGAGTCCGAGCCGGACACTCTTATGAGCCGGCCGGGACTCTAAGGGCCGCTGGGTGCCAACCTCCCTATAGAAAGGGA
CGACCCGGCAGCGGTTTAGGGGCGACAACAATCTGATCGAGAGCCGGGCATAGCTGTTTAGCTCCCTGGTTATCGAAACC
CTGATTAATACCACCTCAACTAGACGTAGGCTTTTACCTTCACCGTAAGGGGCCGAACCAGTATAAACCCTCGTGTTCCT
TGTCCCACTTAACCCCTTCAAGCTTCCCAATTGCGATGGCTCCACGACTAAGTCCTAACCCGAGGACATCTGCCGTGACA
ATTCCACGACA---------------------------------------------------------------------
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>chr3B_692
AAATGTAA------------------------------------------------------------------------
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----------------------------------------------------------AGAAATATCTAGTCCGTACAGC
TACACATGTAGATTGATGACTAGCAAGATTAATCGAAGATGGAAACAAAGGAGTGTCCCAATCTTCGATCCTATAAG---
------------TACAAGAGAATGTGAAAAGAAGACT---AATGCATCGAAATCAGATATTTCTACGAGAACTACGAAGA
TAAGGGTCCCCAGAACAGACGGCCGTTAAGCGGCCACACGCACCCGTAACTACCACAA-----GGTTAACATAC------
-ATGACCTCCTCTGCAAGGCGCGTGGTATCAGCATAGTACT-----AGCCTGTCGCTCCGCTTCACACCATGGCGTCGGC
AGGCGACGTGTTCGACCATGGACGCCATGGCACCAGCCTTGCCAAAGTCGAGCAGGCCACGAGCTGCTGTGCGACCAGTC
GCGTCGACGCGCAGCAGTCTCCTCCGAAGCCGCTGCTGGTGGCCGCCCCGTGCGACGCAGGGGAGTACCCGGTGGTGCTA
TTCTTGCACGGCTACCTCTGCAACAACTACTTCTACTCCCAGCTGCTCCAGCATGTCGCCTCCCATGGCTTCATCGTCAT
CGCTCCTCAGGTACTGTATTATATTAACAAGGTCATCAAGCTAATGTCGGCGTGGCACTGAA---CTTCTTCTCCAGAGA
TGAACACTGACTAAACTCGAGTACAATTGCAGCTGTACACGGTGTCCGGACCCGACACCACCGGCGAGATAAACTTGGCG
GCCGCCGTTATCGACTGGCTCGCCGCCGGCCTCTCTTCCACGCTCGCACCCGGTATTCGACCGAACCTAACTGCGGTCAG
TT-ACCAAATACCCTCGT-----TGCTCTCTAA-TTAACAGAACAATAATTCGAGCTCGAGGTACTAACAATC---GCAT
CATCT---ATCAGGTGTCCATCTCCGGCCACAGCCGCGGTGGCAAGGTGGCCTTCGCGCTCGGGCTGGGCCACGCCAAGA
CCTCCCTGCCTCTCGCGGCACTCATCGCCGTCGACCCCGTGGACGGCACCGGCATGGGCAACCAGACGCCTCCGCCAATC
CTGGTCTACAAGCCGAACACGCTGCGGGTCCCGGCGCCGGTCATGGTCATCGGCACGGGCCTCGGCGAGCTGCCTCGCAA
CGCCCTGTTCCCGCCGTGCGCACCTCTGGGCGTGAGCCACGCGGAGTTCTACGACGAGTGCTCGGCGCCGGCGTGCCACC
TCGTGGCGAGGGACTACGGGCACACCGACATGATGGACGACGTGACGACGGGCGCCAAGGGGCTGGCCACGCGCGCCCTC
TGCAAGAGCGGCGGGGCCAGGGCGCCCATGAGGCGATTCGTCGCCGGCGCCATGGTGGCGTTCCTCAAGAAGTGGGTGGA
GGGGAAGCCGGAGTGGTTGGATGCCATGAGGGAGCAAACTGTGGTCGCGCCTGTGGTGCTGTCCGTGGTGGAGTTCCGTG
ATGAATAGCC-----AG-GATGCCTTGTCAGTTGTCATTAGAGTTT-AATCGATAGCGGTGACTCATACTCCGTAT----
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>chr3A_734
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-----------------GACTAGTAAGACTTATCGAAGATGGAAACAAAGGAATGTCCCAATCTTCCATCGTATCAACTA
TCAAGTACGTACTACAAGAGAATGTGAAAAGGAGGACTAAAATGC------ATCAGATATTTCTTGGAGAACCACGCAGA
TAAGGATCCCCAGAACACACGGCCGTTAAGCGGCCACAAGCACCGGTAACTACCACAACTCCAGGTTAACATAC------
-ACGAGCTCCTCTGCAAGGCGCGTGGGATCGGCAGAGTAGC-----AGCCTGTCGCTCTGCTTCACACCATGGCGTCTGC
AGGCGACGTGTTCGACCATGGACGCCATGGCACCAGCCTTACCAAGGTCGCGCAGGCCACGAGGTGCTGTCCGACCAGTC
CCGTCGACGC---GCAGTCTCCTCCGAAGCCGCTGCTGGTGGCCGCCCCGTGCGACGCAGGGGAGTACCCGGTGCTGCTC
TTCCTGCACGGCTACCTCTGCAACAACTACTTCTACTCCCAGCTGCTCCAGCATGTCGCCTCCCATGGCTTCATCGTCGT
CGGTCCTCAGGTATC---TTATATCAACAAGGTCGTCAAGCTAATGTCGGCGCGGCAATGAA---TTTCTGCTCCAGAGA
TGAACACTG----AACTCGAGTACAATTGTAGCTGTACACGGTATCCGGGCCCGATACCACCGGCGAGATAAACTCGGCG
GCCGCCGTCATCGACTGGCTCGCTGTCGGCCTTTCTTCCAAGCTCCCACCCGGTGTTCGACCGAACCTAACTGCGGTCAG
TTTACCATCGA------T-----TGCTCTCTAATTTAACCGAACAATTATTCATCAAGATACT------AACAATTGCAT
CATCATTCATCAGGTGTCCATCTCCGGCCACAGCCGGGGCGGCAAGGTGGCCTTCGCGCTCGCGCTGGGCCACGCCAAGA
CCACCCTGCCTCTCGCGGCCCTCATCGCCGTCGACCCCGTGGACGGCACCGGCATGGGCGACCAGACGCCCCCGCCGATC
CTGGTCTACAAGCCGAACGCGCTGCGCGTCCCGGCGCCGGTCATGGTCATCGGCACGGGCCTCGGCGAGCTGCCCCGCAA
CGCCCTGTTCCCGCCGTGCGCGCCTCTGGGCGTGAGCCACGCGGAGTTCTACGACGAGTGCTCGGCGCCGGCGTGCCACC
TGGTGGCGAGGGACTACGGGCACACCGACATGATGGACGACGTGACGACGGGCGCCAAGGGGCTGGCCACGCGCGCCCTG
TGCAAGAGCGGCGGGGCCAGGGCGCCCATGAGGCGGTTCGTCGCCGGCGGCATGGTGGCGTTCCTCAACAAGTGGGTGGA
GGGGAAGCCCGAGTGGTTGGATGCCATGAGGGAGCGAACGGATGTCACGCCTGTGGTGCTGTCCGTGGTGGAGTTCCGTG
ATGAGTAGCCAGGATACTGATGCCTTGTCAGTCCTCATTAGAGTTTCAATCGATAGCGGTTACTCATAGCTCC-------
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>SNPs
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---S-----------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-------------------------SS-----S----------------------------S------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----S------S----
-S---S---------SS----------------------------------------------S----------------
----------------------------------------------------------------S---------------
------S----S--------------------S-----------------S----------SS-S-SS-S-SSSSSSSSS
S-----S----------------------------------SSSSS-------------S--------------------
----S-----------------S-S--S----------------------------------------------------
----------------------------------------S--------------------------------------S
--------------------------------------------------S-----S-----------------------
--------------SS-----------------------------S---------------SSSS---------S-S---
----------SSSSSSSSSS------------------------------------------------------------
--------------------------------------------------S-----------------------------
------------------SSSSS---------------------------------------------S-----------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--S-S---------------------------------------------------S-----------------------
---------------------------------------------S--------S------S------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------------------------------SS-
---------S-----------------S----------------------------------------------------
----------------------------------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GACAGGGCCCAACCTTACAA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2493
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CGGCGCACTGGTTTTGTAAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
