>input_sequence_60389
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--------------------------------------------------------------------ATGAGCCGCCTC
ATCAGCACGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGCCGGCGGCGGCACACATAAGCGCCC
GCGATGGCCCAGTGTGCGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAAGACGGAGG
CAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACCGGCAAGACCAAGCTGTCCATCGACGCGGCC
CTAGAGCTCGATGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGCGGCCTCGACGTCACCACCAACAAGGTGAT
GCCCGCCGACCGCCGCGGCGTCGTCCACCACCTCCTCGGCGCCATCCGCGCCAACACCGGCGAGCTGCCCGCCTCCTCGT
TCCGCTCGCTCGCCGCCGCCACGGCGGCCGACATCGCGGCCCGCGGGCGCGTGCCAGTGGTGGCCGGCGGGTCCAACTCC
CTCATCCACGCCTTCCTCGCCGAGCGATTT---GA------CGACCACGCCCCTCGGGACCCATTCGCCGCTGCGGCGAC
CGGATACCGGCCGGCGCTCAGGTTCCCCTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGAATACCTCG
ATCGGCGCGTCGACGATATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGGCCTCCGAG
CGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGAGTACCGGAGATCGGAGACTACTTCGCCGGGCGCAAGAGCCT
CGCCGCCGCAGTAGACGAGATCAAGGCGAACACGCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCGCATGGCAG
ACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTTGCGCGGCTCGCGGGCGCCGGGCGCGACGCC
GAGGCCGCGGCGTGGCATCGCGACGTGCGCCGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAAGGACTGTC
CAGAGACGACGACGCCGACGAAGAGGACGGAGTAGTGACACGGAGACAATGCCATGGCATGGTGGGGTAA----------
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------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G263300
TGAATTTCCTCTATAATCCTATGAATTAGTAGAACACATACCGAATTTTGGTAGTCCGATGATATTATATGAACTATATC
CTACGTCATGTATGAACTATATCCTTGCTCACAACTCCCCTATGCTATGCTCCTAGTTTTTTTTTACGGGAATAACTTCC
GATCTATTTATCAACTGTCAAGGTAGTAC-AAAGAACACCAGAAGTAAAAAACACATCTATGTCCGTAGACCACCTAACG
ACGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCTTTGCCCCTTCCTCATCGAAGCCGGGCAAACCTTGTTG
CAGTAGACAGTCGGGAAGTCGTCGTGCTAAGACCCCATAGGACCAGCGCACCAGAACAGCATCCGCCGCCGATGAAGAGA
AGCGTAGATCAGAAGGATCCAATTTGTAGACACATGAACACGGACGAACGAAGACAAGATCCACATGGATCCACCGAAGA
CAAACGCCGACCGAATCCTGTGAGATCCGTCGGAGACAAACCTCCACACGCCCTCCAACAATGCTAGAAACACCATCGAA
ACGGGGACAAGGCGGGAAGAACCTTATTCA-TCAGCAAAGAGCCGCTGCCTCGCCTCGCCTCTCTGAGGAGGACACAAAC
CCTCAATGAACAAACGACCCTTTGGGAACTGGTGCGGGTTTTCCTGCTTGCGTTGCAGGCAGCTCACATGTTCCCGTCCC
AAAATAGGTGTTGCAATTTTAGTACAACTTTGGACTAACATTAGTATTAAATTTGATACACTATATATATG---------
--------------------------------------------------------------------------------
----------------TTATCCCCATGAACTGGCAATGACACT-GTAAGTGGCACAAATACAGATACCAGCCGTGCAAGA
CTGCAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATTTCCCAACCCGTGG
CAATAAGCGAGTCCCCGCTGCTACTGCGACGAGGTGACTGGTGGGGTGCGCGGGATTGAGTCGCCTATATGAGCCGCCTC
ATCAGCACGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGCCGGCGGCGGCACACATAAGCGCCC
GCGATGGCCCAGTGTGCGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAAGACGGAGG
CAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACCGGCAAGACCAAGCTGTCCATCGACGCGGCC
CTAGAGCTCGATGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGCGGCCTCGACGTCACCACCAACAAGGTGAT
GCCCGCCGACCGCCGCGGCGTCGTCCACCACCTCCTCGGCGCCATCCGCGCCAACACCGGCGAGCTGCCCGCCTCCTCGT
TCCGCTCGCTCGCCGCCGCCACGGCGGCCGACATCGCGGCCCGCGGGCGCGTGCCAGTGGTGGCCGGCGGGTCCAACTCC
CTCATCCACGCCTTCCTCGCCGAGCGATTT---GA------CGACCACGCCCCTCGGGACCCATTCGCCGCTGCGGCGAC
CGGATACCGGCCGGCGCTCAGGTTCCCCTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGAATACCTCG
ATCGGCGCGTCGACGATATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGGCCTCCGAG
CGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGAGTACCGGAGATCGGAGACTACTTCGCCGGGCGCAAGAGCCT
CGCCGCCGCAGTAGACGAGATCAAGGCGAACACGCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCGCATGGCAG
ACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTTGCGCGGCTCGCGGGCGCCGGGCGCGACGCC
GAGGCCGCGGCGTGGCATCGCGACGTGCGCCGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAAGGACTGTC
CAGAGACGACGACGCCGACGAAGAGGACGGAGTAGTGACACGGAGACAATGCCATGGCATGGTGGGGTAAGAAGAACAGG
AAAAGGCTTCGGGTTCGGGCGCGATGCCGAGGCCGCGGCATGGGATCGCGACGGGCCTCGCCTCCATGCGGCCGTTCATG
GCAGGCAAGGACTGTCCGGACACAAGGACGACGCCGATGACGAGGACGGGTCAGTCGCCCGGAGACAATGCCGTGGCATG
GTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATCCGCCGCCGATTTTGGAGGGC
CCGGCGGCTGACCGGACA-GGGCCGGTGGGGGCCATAGCGGTGCCACGGCGAACGGCGCGACGACAGAACACGGAGACAA
GACAAGAGAAGTGTCAAGTTTTGCA-GGGGGGCTGTGAATTCTCTCTCCCCCCCTCC--CTCCCTCCCTGGATCGAGAGG
CTCTTCTCCTTCCTCTTCTTCGTTCTTCAGAATCTGCTCTGCTTAGCTAGCGACACCACACCACACCACTGTACAATACT
ACAGTGCAATCTAGTCCGCTATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAGCTGCCTATCTTGAACAGTGTTGTT
GAGGAGCGTGTGGTTTTTGTTGGGGCTGGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCACAGATTGGCGTCTCT
AGAGTCTGGACAAGTGCCTTTTTTGACCTGGCTTTGCATCTTGCATGTTATGTGCCGATTGATCATTTGGAGCCAGATTT
TACTTCACCCTACCATGTTA-TG-TTGGTCGTTTCTGGTTGATTCATTC-CTCTTCTTTTTTCTATGTAATAAACAATAA
ATAAGCGTGGATCGCTT---------------------------------------------------------------
----------------------------------------------------GTTCTGGTTTGAAAATATTCCTGAGGGT
GCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACGCGTGAGTT
GGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTTTT
>chr3D_1
TGAATTTCCTCTATAATCCTATGAATTAGTAGAACACATGCCAAATTTTGATAGTCCGATGATATTATATGAACTATATC
CTATGTCATGTATGAATTATATCCTTGCTCACAGCTCCCCTATGCTATGTCCTAAT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTGATACTCCCTACA-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCCT
AAAATAAGTGTTTTAGTTTTAGTATAACTTTTTATTAAACTTAGTATTCAAGTTGAGACACTTTATTTTGAGATGGAGTG
AATATATCTTATACGAACTATATGAACAAATGAGAAAGGGGGTGTGGGGGGGTCGTCCTGAACTATATATATATATATGT
GCGGGGCAGCCAACGA----------------------ACACTCGTAAGTCGCACAAATACAGATACCAGCCGTGCAAGA
CTACAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATCTCCCAACCCGTGG
CAATAAGCGAGTCCCCGCTGCTACTGTGGCGAGGTGACTGGTGGGGTGCGCGGGATTGAGCCGCCTATATGAGCGGCCTC
ATCAGCAGGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGGCGTCGGCGGCACACATAAGCGGCC
GCGATGGCCCAGTGTGAGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAAGATGGAGG
CAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACGGGCAAGACCAAGCTGTCCATCGACGCGGCC
CTAGAGCTCGGTGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGGGGCCTCGACGTCACCACCAACAAGGTGAT
GCCCGCCGACCGCCGCGGCGTCGCCCACCACCTCCTCGGCGCCGTCCGCGCCGATGCCGGCGAGCTCCCCGCCTCGTCCT
TCCGCTCGCTCGCCGCCGCCAAGGCGGCCGACATCGCGGCGCGCGGGCACGTGCCAGTGGTGGCCGGCGGGTCCAACTCC
CTCATCCACGCCTTCCTCGCCAAGCGATTT---GA------TGCCCACGCCCCTCGGGACCCTTTCGCCGCTGCGGCAAC
CGGATACCGGCCGGCGCTCAGGTTCCCGTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGAATACCTCG
ATCGGCGTGTCGACGACATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGCGAATACTTCGCGACAACGTCGGCCTCTGAA
CGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGCGTGCCGGAGATCGGGGACTACCTCGCCGGGCGTAAAAGCCT
CACCGCCGCAGTGGACGAGATCAAGGCGAACACTCGGGTGCTCGCGGCGGCGCAGGTCGGCAAGATCCGGCGCATGGCAG
ACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCACCGGCACCGTCCTGGCGCGGCTCGCGGGCGCCGGGCGCGACGCC
GAGGCCGCGGCGTGGCATCGCGACGTGCGCGGGCCGGGCCTCGCCGCCATGCGGCAGTTCCTACGCAGCCAAGGACTGTC
CAGACACGACGACGCCGATGAAGAGGACGGAGTAGTCACACGGAGACAATGCCATGGCATGGTGGGGTAAGAAGAACAGG
AAAAGGCTTCGGGTTCGGGCGCGACACCGAGGGCGCGGCGTGGGATCGCGACGGGCCTCGCCTCCATGCGGCCGTTCATG
GCAGGCAAGGACTGTCCGGACACAAGGACGACGCCGATGACGAGGACGGGTCAGTCGCCCGGAGACAATGCCGTGGCATG
GTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATACGCCGCCGATTTTGGAGGGC
CCGGCGGCTGACCGGACACGGGCAGGTGGGGGCCATGGTGGTGCCACGGCGAACGGCACGACGATAGAACACGGAGACAA
GACAAGAGAAGTGTCAAGTTTTGCA-GGGGGGCTGTGAATTCTCTCTCTCCCTCTCCCTCTCCCTTCCTGGATCGAGAGG
CTCTTC----------------TTCTTCAGAATCTGCTCTGCT-AGCTAGCCACACCACACAACACCACTGTATAATACT
CCAGTGTAATCTAGTCCAGCATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAGCTGCTCATCTTGAACAGTGTT---
GAGGACCGTGGGGTTTTTGTTGGGGCTAGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCAGAGATTGGCGTCTCT
CAAGTCTGGACAAGCGCCTTTTTTGACCTGGCTTTGCGTCTTGCATGTTATATGCCGGTTGATCATTTGGGTCCAGATTT
TACTTCACCCTACCATGTTAATG-TTGGTCGTTTCTAGTTGATTCATTCATTCTTCTTCTTTTCTA-TAATACAAAATAA
ATAAGTGCGGATCGCTT---------------------------------------------------------------
----------------------------------------------------GTACTGGTTTGAAAATATTCCTGAGGGT
GCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACGCGTGAGTT
GGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTATT
>chr3B_91
--------------------------------------------------------------------------------
----------TATGAACTATATCCTTGCTCACAACTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TGT
GCGGGGCAGCCAACGATTATCCCAATGAACTGGCAATGACACTCGTAAGTCGCACAAATACAGATACCAGCCGTGCAAGA
CTACAAGCAACAAGCCGCGCATGAGTGTTCCCTCCGGCAGAATGCCGTGGCACTCTCAGCTGATATCTCCCAACCCGTGG
CAATAAGCGAGTCCCCGCTGCTACTGTGGCGAGGTGACTGGTGGGGTGCGCGGGATTGAGCCGCCTATATGAGCGGCCTC
ATCAGCAGGATCGGCAGCGGCGTCCGCTCACCGATGGCGTCCGCGGCCATCGCCGGCGTCGGCGGCACACATAAGCGGCC
GCGATGGGCCAGTGTGAGCATGGAAAGGACAAGAGTCAGGGGTTGTTGCAGCTGCAGCTGTAGCGGCACCAAGATGGAGG
CAGAACGTGGGGACACGAGGCTCGTGGTGATCGTGGGGGCAACGGGCACGGGCAAGACCAAGCTGTCCATCGACGCGGCC
CTAGAGCTCGGTGGCGAGGTGGTGAACGCCGACAAGATCCAGCTTTACCGGGGCCTCGACGTCACCACCAACAAGGTGAT
GCCCGCCGACCGCCGCGGCGTCGCCCACCACCTCCTCGGCGCCGTCCGCGCCGATGCCGGCGAGCTCCCCGCCTCGTCCT
TCCGCTCGCTCGCCGCCGCCAAGGCGGCCGACATCGCGGCGCGCGGGCGCGTGCCAGTGGTGGCCGGCGGGTCCAACTCC
CTCATCCACGCCTTCCTCACCAAGCGATTT---GA------TGTCCACGCCCCTCGGGACCCTTTCGCCGCTGCGGCGAC
TGGATACCGGCCGGCGCTCAGGTTCCCGTGCTGTCTCCTCTGGGTCGATGTCGACGAGGCAGTTCTGGACGAATACCTCG
ATCGGCGTGTCGACGACATGCTGGGTGAGGGCATGGTCGAGGAGCTCCGTCAGTACTTCGCGACAACGTCGGCGTCCGAG
CGGGCCTCGCACG---CCGGGCTGCGCAAGGCCATCGGCGTGCCGGAGATCGGGGACTACCTCGCCGGGCGCAAGAGCCT
CGCAGCCGCAGTAGACGAGATCAAGGCGAACACGCGGGTGCTCGCGGCAGCGCAGGTCGGCAAGATCCGGCGCATGGCAG
ACGGCTGGGGCTGGCCCGTTCGGCGCCTCGACGCCAGCGGCACCGTCCTCGCGCGGCTCGCGGGCGCCGGGCGCGACGCC
GAGGCCGCGGCCTGGCATCGTGACGTGCGCGGGCCGGGCCTCGCCGCGATGCGGCAGTTCCTGCGCAACCAA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GGACACAAGGACGACGCCGATGACGAGGACGGCTT---------GAGACAATGCCGTGGCATG
GTGGGGTGAGAAGAACAGGGAAAAGCTCGAGAGCTTTTTCGGGTTCAAAATTTTCTGATAGGCTGCCGATTTTGGAGGGC
CCGGCGGCTGAT-----------CGGTGGGGGCCATAGTGGTGCCACGGCGAACGGCACGACGATAGAACACGGAGACAA
GACAAGAGAACAGTCAAGTTTTGCAGGGGGGGCTGTGAATTCTCTCTCTCCCTCCCCCTC------CCTGGATGGAGAGG
CTCTTCT------TCTTCTTCTTTCTTCAGAATCTGCTCTGCT-AGCTAGCCACACCACAACACTGTACA--ATAATACT
ACAGTGTAATCTACTCCGCCATGTTCAAAATTTGAACTAGTTTTGCTTTTTGGCAACTCCTCATCTTGAACAGTGTT---
GAGGACCGTGGGGTTTTTGTTGGGGCTAGCTTTTCCTTTGCTGGCCCTCCTTTTCCTCTGCATCAGAGATTGGCGTCTCT
CAAGTCTGGACAAGCGCCTTTTTTGACCTGGCTTTGCGTCTTGCATGTTATATGCCGGTTGATAATTAGGGGCCAGATTT
TACTTCACCCTACCATGTTA-TGTTTGGTCGTTTCTAGTTGATTCATTC-TTCTTCTTCTTTTCTA-TAATAAAAAATAA
ATAAGCGTGGATCGCTTGTACTTCCTCCGTCCGAAAATACTTGTCGGAGAATTGCATAAAAATGGATGTATCTACAACTA
AAATATGTCTAGATACATTTATTCCTCTGACAAGTATTTTCGGACGGAGGGAGTACTGGTTTGAAAATATTCCTGAGGGT
GCGTGCGAGGGCTGATTAGATTGTAATCTCATGCTTAGTGTGTGATTATGGGGGAGGGGATTGTGCTGGACGCGTGAGTT
GGTGTTCTTGTTGTGCCAGCTAGGAAGACAGTTGGAGTCCAGACGTGTGCTCTTCTCCATTCATTTCTTTTT
>chr3B_134
TAGTTC--------------------------------------------------------------------------
----------------------------------------------------------TTTTTTTTCGGAAATATCTTCC
GATCTATTCATCAACTGTCAGGATAGTAC-AAAGAA----AGAAGTAAAAAATACATCTAGGTCCGTAGACCACCTAGCG
ACGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCTTCGCCCCTCCCTCATCGGAGCCGGGCAAATCTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGTCCAGCGCACCAGAATAGCATCCGCCGTCGATGAAGAGA
AGCGTAGATCAGAAGGATCCAATATGTAGACACACGAACACAGACGAACGAAGACAAGATCCACATGAATCCACCGAAGA
CAAACGCCGACCGAATCCCATGAAATCCGCCAGAGACAAACCTCCACACGCCTTCCAACAATCGTAGAAACACCATCGGA
ATGGGGACAAGGCGGGGAGAACCTTATTCAATCGACAGAGAGCCGCCGC--CGCCTCGCCTCTCTGAGCAGGACACAAAA
CCT-----------------------------------------------------------------------------
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>chr2D_137
--------------------------------------------------------------------------------
--------------------------------------------------------TTTTTTTTTGCGGGAATAACTTCT
GATCTATTCATCAATTGTGAAGGTAGCACAAAAGAACACCAGAATTAAAAAATACATCTAGGTCCGTAGACCACCTAGCG
ATGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCTGCCGTCTTCGCCCCTCCCTCATCGAAGCCGGGCAAACCTTGTTG
TAGTAGACAATCGGGAAGTTGTCGTGCTAAGACCCCATAGGACCAGCGCACCAGAACAGCATCCACCGCCGATGAAGAGA
AGCGTAGATCAAATGGATCCAATCTGTAGACACACGAACACAGACGAACGAAGACAAGATCCACATGGACCCACCGAAGA
CAAACGCCGACCAAATCCCATGAGATCCGCCGGAGACAAACCTCCACACGCCCTCCAACGATGCTAGAAACACCATCGGA
ACGGGGACAAGGCGGGGAGAACTTTATTCCATCAGCAGAGAGCCGCCGC--TGCCTCG-CTCTCTGAGCAGGACACAAAC
CCT-----------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr7D_137
--------------------------------------------------------------------------------
--------------------------------------------------------TTTTTTTTTGCGGGAATAACTTCC
GATCTATTCATCAACTGCCAAGGTAGTAC-AAAGAACACCAGAAGTAAAAAATACATCTAGGTCCATAGACTACCTACCG
GCGACTACTTGCACCGGAGCGGGCCGAAGGCGCGCCGCCGTCTTCGCCCCTTCCTCATCGAAGCCCGGCAAACCTTGTTG
TAGTAGATAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCACCAGAACAACATCCGCCGCCGATGGAGAGA
AGCGTAGATCAGACGGATCCAATCTGTAAACACACAAACATAGACGAACGAAGACAAGATCCACAGGGATCCACCAAAGA
CAAACGCCGACCGAATCCCGTGAGATCCGCCGGAGACAAACCTCCACGCGCCCTCCAACGATGCTAGAAACACCATCGGA
ACGGCGACAAGGCGGGGAGAACCTTATTCCATCAGCAGAGAGCCGCCGC--CGCCTTGCCTCTCTGAGTAGGAAACAAAC
CCT-----------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr5A_137
TTTCTT--------------------------------------------------------------------------
-------------------------------------------------------------TTTTGCGGGAATAACTTTC
GATCTATTCATCAACTGTCAAGGTAGTAC-AAAGAACACCCAAAGTAAAAAATGCATCTAGGTCCGTAGACCACCTAGTG
ACGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCCGGCGTCTTCGCCCCTCCCTCATTGAAGCCGGGCAAACTTTGTTG
TAGTAGACAGTCGGTAAGTCATCGTGCTAAGGCCTCATAGGACCAGTGCACCAGAGCAGCATCCGCCGCCGATGAAGAGA
AGCATAGATCAGAAGGATCCAATCTGTAGACACACGAACACAGATGAACGAAGACAAGATTCACATGGATCCACCGAAGA
CAAACGCCGACCGAATCCCGTGAGATCCGCCGGAGACAAACCTCCACACGCCCTCCAATGATGCTAACAACACCATCAGA
ATAGGGACAAGGCGGGAAGAACCTTATTCCATCAGCAGAGAGTCGCCAC--TGCCTCGCCTCTCTGAGCTGGACACAAAC
CCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr5D_138
--------------------------------------------------------------------------------
---------------------------------------------------------TTTTTTTTGTGGGAATAACTTTC
GATCTATTCATCAACTG--AAGGTAGTAC-AAAGAATACCAGTAGTAAAAAGTACATTTAGGTACGTAGACCACCTAGCG
ACGACTACTTGCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCTTCGCCCCTACCTCATCGAAGCCGGGCAAACCTTGTTG
TAGTAGACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCACCAGAACAACATCCGTTGCCGTTGAAGAGA
AGCGTAGATCAGAAGGATCCAATATGTAGACACACGAACACAGACGAACGAAGACAAGATCCACATGGATCCACCGAAGA
CAAACGCCGACCGAATCCCGTAAGATCCACTGGAGACAAACCTTCATACGCCCTCCAATGATGCTAGAAACACTATCGGA
ACGGGGACAAGGCGGGGAGAACCTTATTTCATCAGCAGAGAGCCGCCGC--CGCCTCGCCTCTCTGAGCAGAACACAAAC
CCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr6D_139
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTTTTGCGGAAATAACTTCC
GATCTATTCATCAATTGTCAAGGTAGTAC-AAAGGACACCAGAAGTAAAAAATACATCTAGGTCCGTAGACCACCTAGCG
ATGATTACTTGCACTGGAGCGAGCTGAAGGCATGCCGCCGTCTTCGCCCCTCCCTCATTGGAGCCGGGCAAACCTTGTTG
TAGTAGATAGTCGGAAAGTCGTCATGCTAAGGCCCCATAGGACCAGCGCACCAGAACAGCATCCGCCGCCGATGAAGAGA
AGCGTAGATCAGAAGGATCCAATCTGTAGACGCATGAACACAGACGGACGAAGATAAGATCCACATGGATCCACCGAAGA
CAAACACCGACCGAATCCCATAAGATTCGCAGGAGACAAACCTCCACACGCCCTCCAACGATGATAGAAACACCATTGAA
ACGGGTACAAGGTGGGGAGAACCTTATTCCATCAACAGAGA---GCCGC--CGCCTCGCCTCTCTGAGCAGGACACAAAC
CCTACAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1A_1187
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------ACGCGGCTGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCGGCG
CGGGAGCTGCGCGGCGAGGTCGTCAACGCCGACAAGATCCAGCTCTACAAAGGCCTCGACGTCACCACCAACAAGGTGCC
GCTCGCCGACCGCCGCGGCGTCGAGCACCACCTGCTCGGCGCCGTCCCCCCCGAGGCCGGCGCGCTCCCGCCGTCCTCCT
TCCGCTCCCTCGGCGCCGCCAAGGTCGCCTCGATCGCGGCCAGGGGGCTGCTGCCCGTCGTAGCCGGCGGGTCCAACTCC
CTCATCCACGCCCTCCTCGCCGACCTCCCCGATGACGACGGCGCCGCGCTCCCCGAGGACCCCTTCTCCCTCGACCGCTG
C---TACCGCCCCGCGCTCCGGTACCCGTGCTGCCTCCTCTGGGTGGACGTGGAGGAGGCGCTCCTCGCCGAGTACCTGG
ACCGGCGCGTGGACGACATGGTGGGCGCCGGCATGGTGGAGGAGCTGCGGGACTACTTCGCCGCCACCACCGCCGCGGAG
CGCGCCGCGCACGCCCCCGGGCTGGGCAAGGCCATCGGGGTGCCGGAGCTGGGCGAGTACCTCGCCGGGCGCAGGAGCTT
CCGCGCGGCCGTGGACGACATCAAGGCCAACACCCGGCGCCTCGCCGCCGCGCAGGTGTGCAAGATCCGGCGCATGGCCG
ACGGCTGGGGCTGGCCCGTGCGCCGCCTCGACGCCTCCGCCACCATCCGCGCGCGGCTCGCCGGGGCCGGCCCGGCCGCC
GAGTCGGCGTCCTGGGAGCGCGACGTCCGCGGCCCCGGCCTCGCCGCCATCCGCGCCTTCCTCGCCGACCAA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1B_1191
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GGCTGGTGGTGATCGTCGGCGCCACCGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCG
CGGGCGCTGGGCGGCGAGGTCGTCAACGCCGACAAGATCCAGCTCTACCAAGGCCTCGACGTCACCACCAACAAGGTGCC
CCTCGCCGACCGCCGCGGCGTCGCGCACCACCTGCTCGGCGCCGTCCCCCCCGACGCCGGCGCGCTCCCGCCGTCCTCCT
TCCGCGCCCTCGCAGACGCCAAGGCCGCCTCGATCGCGGCCAGGGGGATGCTGACCGTCGTCGCCGGCGGGTCCAACTCC
CTCATCCACGCCCTCCTCGCCGACCTCCCCGACGA------CGCCGCGCTCCCCGAGGACCCCTTCTCCCTCGACCGCTC
C---TACCGCCCCGCGCTCCGGTACCCCTGCTGCCTCCTCTGGGTGGACGTGGAGGAGGCGCTCCTCGCCGAGTACCTGG
ACCGGCGCGTGGACGACATGGTGGGCGCCGGCATGGTGGAGGAGCTCCGGGAGTACTTCGCCGCCACCACCCCCGCGGAG
CGCGCGGCCCACGCCCCCGGGCTGGGCAAGGCCATCGGGGTGCCGGAGCTGGGCGAGTACCTCGCCGGGCGCAGGAGCTT
CCGCGCCGCTGTCGACGACATCAAGGCCAACACCCGGCGCCTGGCCGCCGCGCAGGTGGGCAAGATCCGGCGCATGGCCG
ACGGCTGGGGCTGGCCCGTGCGCCGCCTCGACGCCTCCGCCACCATCCGCGCGCGGCTCGACGGCGCCGGCCCGGCCGCC
GAGTCGGCGTCCTGGGAGCGCGACGTCCGCGGCCCCGGCCTCGCCGCCATCCGCGCCTTCCTCGC---------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>SNPs
---------------------------------------S--S-------S-----------------------------
---S---------------------------------------------SS-SS-S---------S--------------
--------S-------------------------------------------S-------S----------------S--
--------------------------------------------S-----------------------------------
S-------------------------------------------------------------------------------
-----------------------S-----------------S--------------------------------------
------------------S----------S--------------------------------------------------
-------------------------------------S--------S--SS-----------------S-----------
---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S
------S-----SS-S--------S------SS-S---SS--------S--S----S-----S---S-SSS---------
--------------------------------------------------------------------------------
-----------------------S--------------------------S-----------------------------
--S---------------------------------------------------------------S-------------
--------------------------S-S-------------------------------S-------------S-----
-------S-----------------------------------------------S--S------------------S--
----------------S---------------------------------------------------------S-----
--------------------------------------------------------------------------------
----------S---------------------------------------S-----------------------------
-----------------------S-------------------S--------S--S----------S-----------S-
---------------------S----------------------------------------------------------
-------------------------------------------S------------------S-----------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------S--S-----------S------S-------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------S-------------------------------------------------
----S-------------S-----------------S-------------------------------------------
------------------------SS------S------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------S------------------S------S---------------
------------------------------------------------S---S------------S--------------
-------SSSSSS--------S---------------------S-------S---------------------S------
------S------------S----------------------------------------SS---------------SSS
-----S----S----------------S-------------------------------------S--------------
SS------------S----------------------S-------------S-----S------------S---------
------------------------------------S-------------S-------S---SSSSS-------S-----
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_963
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------ATACCAGCCGTGCAAGA
CTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GACACGGAGACAATGCCATG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_2165
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAGCCAAGGACTGTC
CAGAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_3175
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TCTGGTTTGAAAATATTCCTGAGGG-
--------------------------------------------------------------------------------
------------------------------------------------------------------------
